Citrus Sinensis ID: 044923

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD
Secondary Structure (PSIPRED)
ccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHccccccccccEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHcHHccccc
Secondary Structure Prediction (SSPRO)
cccccHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEccccEEEEEEEccccHHHHHHHHHHHHHHHccccEEEEccccccccccHcccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mlqansmsprlqgKVALITGGAGSIGECAARLFSKHGAKVLIADIKDdlgesvcedissssssangcsyvhcdvtkekDIENAVNTAVSqygkldimfnnagivdeakpnildndqAEFERILSVNLVGAFLGTKHAArvmkpagrgsiisTASVCGVIGGVtshaytsskhgvVGLMKNTAVELGRfgirvncvspyavsspmakgflklddd
Flexible Loop (DISEMBL)
mlqansmsprlqGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDissssssangcsYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVspyavsspmakgflklddd
Low Complexity Region (SEG)
MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIssssssANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD
Disordered region (IsUnstruct)
*************KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE*********NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS*************
Disordered Region (DISOPRED)
**********LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK*F******
Disordered Region (DISEMBL)
**********LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV*************CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD
Disordered Region (DISPRO)
*********RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
Q7FAE1	274	Momilactone A synthase OS	yes	no	0.934	0.729	0.565	2e-55
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.915	0.734	0.515	2e-53
Q9SCU0	303	Short-chain dehydrogenase	yes	no	0.906	0.640	0.520	2e-52
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.929	0.698	0.54	1e-48
P50160	336	Sex determination protein	N/A	no	0.906	0.577	0.519	1e-47
Q94K41	257	Short-chain dehydrogenase	no	no	0.929	0.774	0.456	1e-46
O80714	258	Short-chain dehydrogenase	no	no	0.878	0.728	0.494	4e-46
O80713	257	Short-chain dehydrogenase	no	no	0.883	0.735	0.484	3e-45
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.897	0.644	0.462	9e-44
F4J300	259	Short-chain dehydrogenase	no	no	0.883	0.729	0.469	3e-43

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  214 bits (546), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/205 (56%), Positives = 152/205 (74%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           +L GKVA+ITGGA  IG C ARLF KHGA+V++ADI+D+LG S+  ++   +SS     Y
Sbjct: 14  KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASS-----Y 68

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVT E D+  AV+ AV+++GKLD+MFNNAG+       + +  + +FER+L+VNLVG
Sbjct: 69  VHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVG 128

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FLGTKHAARVM PA RGSIISTAS+   + G  SHAYT+SKH +VG  +N A ELGR G
Sbjct: 129 PFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHG 188

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSP  V++P+A+  + +DD+
Sbjct: 189 IRVNCVSPAGVATPLARAAMGMDDE 213

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 5

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  208 bits (530), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/200 (51%), Positives = 134/200 (67%), Gaps = 4/200 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVAL+TGGA  IGE  ARLF +HGAK+ I D++D+LG+ V + +     +     Y
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHAC----Y 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            HCDVT E D+  AV+    +YG +DIM NNAGI  +   +I D D  EF+++  +N+ G
Sbjct: 58  FHCDVTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FLG KHAAR+M P  +GSI+S ASV  VI G   H YT +KH VVGL K+ A ELGR G
Sbjct: 118 VFLGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHG 177

Query: 190 IRVNCVSPYAVSSPMAKGFL 209
           IRVNCVSPYAV + ++  +L
Sbjct: 178 IRVNCVSPYAVPTRLSMPYL 197

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 103/198 (52%), Positives = 143/198 (72%), Gaps = 4/198 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVA+ITGGA  IG+    LF++HGA V+IAD+ +  G S+ + +SS  +S    ++
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPM-VAF 89

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN--ILDNDQAEFERILSVNL 127
           + CDV+ E D+EN VN  V++YG+LDI+FNNAG++ + K +  ILD D  EF+ ++ VN+
Sbjct: 90  ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query: 128 VGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            G  LG KH AR M   G +G IISTASV GV+GG+  HAYT+SKH +VGL KN A ELG
Sbjct: 150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query: 187 RFGIRVNCVSPYAVSSPM 204
           ++GIRVNC+SP+ V++ M
Sbjct: 210 KYGIRVNCISPFGVATSM 227

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  192 bits (488), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/200 (54%), Positives = 133/200 (66%), Gaps = 1/200 (0%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GKVALITGGA  IGE   RLF KHGAKV I D++DDLG  VC+ +    S      +
Sbjct: 17  RLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAF-F 75

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +H DV  E DI NAV+ AV  +G LDI+ NNAG+     P+I +   +EFE    VN+ G
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFL  KHAARVM P  +GSI+S  SV GV+GGV  H+Y  SKH V+GL ++ A ELG+ G
Sbjct: 136 AFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195

Query: 190 IRVNCVSPYAVSSPMAKGFL 209
           IRVNCVSPYAV++ +A   L
Sbjct: 196 IRVNCVSPYAVATKLALAHL 215

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  189 bits (480), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/204 (51%), Positives = 139/204 (68%), Gaps = 10/204 (4%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
             M  RL GKVA++TGGA  IGE   RLF+KHGA+V+IADI D  GE++      +S+  
Sbjct: 47  TPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEAL------ASALG 100

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIV---DEAKPNILDNDQAEFE 120
              S+V CDV+ E D+  AV+ A+S++G +LD+  NNAG++     A  +IL  D AEF+
Sbjct: 101 PQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFD 160

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R+L VN +GA LG KHAAR M P   GSI+S ASV  V+GG+  HAYT+SKH +VGL KN
Sbjct: 161 RVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKN 220

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A EL   G+RVNCVSP+ V++PM
Sbjct: 221 AACELRAHGVRVNCVSPFGVATPM 244

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 94/206 (45%), Positives = 138/206 (66%), Gaps = 7/206 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK+ +ITGGA  IG  + RLF++HGA+V+I D++D+LG++V   I    +S     Y
Sbjct: 5   RLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKAS-----Y 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            HCDVT E ++ENAV   V +YGKLD++F+NAG++ E   +ILD +  E +R +++NL G
Sbjct: 60  YHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRG 118

Query: 130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                KHAAR M   G RGSI+ T SV   I G   H YT+SKHG++GL+K+ +  LG++
Sbjct: 119 TAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKY 178

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
           GIRVN V+P+ V++P+     K++ +
Sbjct: 179 GIRVNGVAPFGVATPLVCNGFKMEPN 204

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  184 bits (467), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 137/196 (69%), Gaps = 8/196 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GK+ +ITGGA  IG  AARLF+ HGAKV+I D++++LG++V   I    +S     +
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKAS-----F 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             CDVT E ++E+AV   V ++GKLD++F+NAG++ E   + LD D   F+RI++VN+ G
Sbjct: 60  YRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVL-EPLESFLDFDLERFDRIMAVNVRG 118

Query: 130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           A    KHAAR M   G RGSI+ T SV   IGG   H YT+SKHG+VGL+++   +LG++
Sbjct: 119 AAAFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKY 177

Query: 189 GIRVNCVSPYAVSSPM 204
           GIRVN V+PYAV++PM
Sbjct: 178 GIRVNGVAPYAVATPM 193

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  181 bits (460), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 134/196 (68%), Gaps = 7/196 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK+A+ITGGA  IG  A RLF+ HGAKV+I D +++LG++V   +    +S     +
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKAS-----F 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             CDVT EK++ENAV   V +YGKLD++F+NAG++ E   + LD +  +F+R ++VN+ G
Sbjct: 60  YRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVM-EQPGSFLDLNLEQFDRTMAVNVRG 118

Query: 130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           A    KHAAR M   G RGSI+ T SV   IGG   HAYT+SKH ++GL+K+    LG++
Sbjct: 119 AAAFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKY 178

Query: 189 GIRVNCVSPYAVSSPM 204
           GIRVN V+PYAV++ +
Sbjct: 179 GIRVNGVAPYAVATAI 194

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  176 bits (447), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 92/199 (46%), Positives = 135/199 (67%), Gaps = 7/199 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK+A+ITGGA  IG  A RLF+ HGAKV+I DI+++LG+++   I       +  S+ 
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIG-----LDKASFY 98

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            C+VT E D+ENAV   V ++GKLD++F+NAG++ EA  ++LD D   F+R ++VN+ GA
Sbjct: 99  RCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVL-EAFGSVLDLDLEAFDRTMAVNVRGA 157

Query: 131 FLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               KHAAR M  +G RGSI+ T S+   IGG   H+YT+SKH ++GL+++    LG++G
Sbjct: 158 AAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYG 217

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           IRVN V+PY V++ M   +
Sbjct: 218 IRVNGVAPYGVATGMTSAY 236

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  174 bits (442), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 134/196 (68%), Gaps = 7/196 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK+ +ITGGA  IG  AARLF+ HGAKV+I D++++LG++V   I       +  S+
Sbjct: 5   RLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIG-----LDKASF 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             CD+T E ++ENAV   V ++GKLD++F+NAG++ E   +ILD D   F+R ++VN+ G
Sbjct: 60  YRCDITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRG 118

Query: 130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           A    KHAAR M  +G RGSI+ T SV   IGG   H+YT+SKH ++GL+++    LG++
Sbjct: 119 AAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKY 178

Query: 189 GIRVNCVSPYAVSSPM 204
           GIRVN V+PY V++ +
Sbjct: 179 GIRVNGVAPYGVATGL 194

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
225464860	268	PREDICTED: momilactone A synthase-like [	0.971	0.776	0.726	2e-86
224131792	271	predicted protein [Populus trichocarpa]	0.934	0.738	0.751	3e-86
296084866	861	unnamed protein product [Vitis vinifera]	0.971	0.241	0.726	4e-86
255565739	272	short chain alcohol dehydrogenase, putat	0.939	0.738	0.756	4e-86
359479542	327	PREDICTED: momilactone A synthase-like [	0.934	0.611	0.721	7e-82
388499080	271	unknown [Medicago truncatula]	0.934	0.738	0.707	3e-80
224133572	271	predicted protein [Populus trichocarpa]	0.934	0.738	0.702	4e-80
356544754	269	PREDICTED: momilactone A synthase-like [	0.925	0.736	0.707	6e-79
224131800	275	predicted protein [Populus trichocarpa]	0.957	0.745	0.661	8e-78
330318664	277	alcohol dehydrogenase [Camellia sinensis	0.934	0.722	0.712	2e-77

>gi|225464860|ref|XP_002272206.1| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 154/212 (72%), Positives = 184/212 (86%), Gaps = 4/212 (1%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
           Q ++ + RLQGKVALITGGA  IGE  ARLFS+HGAKV+IADI+D+LG+SVC+++SS +S
Sbjct: 6   QISAAARRLQGKVALITGGASGIGESTARLFSRHGAKVVIADIQDNLGQSVCKELSSPTS 65

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
           +    S+VHCDVT EKD+ENA+N AV++YGKLDIMFNNAGIV E+KPNILDND+ EFE+I
Sbjct: 66  A----SFVHCDVTSEKDVENAINVAVAKYGKLDIMFNNAGIVGESKPNILDNDKTEFEKI 121

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           L+VN+VGAFLGTKHAARVM PAG GSII+TASVC  +GGV SHAYTSSKH VVGL +N A
Sbjct: 122 LNVNVVGAFLGTKHAARVMIPAGNGSIITTASVCSTVGGVASHAYTSSKHAVVGLARNAA 181

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           VELG++GIRVNCVSPY V +P+AK F KLDDD
Sbjct: 182 VELGKYGIRVNCVSPYLVVTPLAKDFFKLDDD 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131792|ref|XP_002328109.1| predicted protein [Populus trichocarpa] gi|222837624|gb|EEE75989.1| predicted protein [Populus trichocarpa]

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 154/205 (75%), Positives = 180/205 (87%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVALITGG+  IGE AARLF+KHGAKV+IAD++D+LG SVCE++ + S+S     +
Sbjct: 13  RLEGKVALITGGSSGIGESAARLFAKHGAKVVIADVQDELGHSVCEELKTESAS-----F 67

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVT+EKD+ENAVNTAVS++GKLDIMFNNAGIV   KPNILDND+AEFE+++SVN+VG
Sbjct: 68  VHCDVTQEKDVENAVNTAVSKHGKLDIMFNNAGIVGTPKPNILDNDKAEFEKVISVNVVG 127

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLGTKHAARVM P  RGSIISTASVCG IGGV SHAYTSSKHGV+GLM+NTAVELG+ G
Sbjct: 128 AFLGTKHAARVMIPVRRGSIISTASVCGTIGGVASHAYTSSKHGVIGLMRNTAVELGQHG 187

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPY V +P+ K F KLDDD
Sbjct: 188 IRVNCVSPYVVLTPLVKDFFKLDDD 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084866|emb|CBI28275.3| unnamed protein product [Vitis vinifera]

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/212 (72%), Positives = 184/212 (86%), Gaps = 4/212 (1%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
           Q ++ + RLQGKVALITGGA  IGE  ARLFS+HGAKV+IADI+D+LG+SVC+++SS +S
Sbjct: 599 QISAAARRLQGKVALITGGASGIGESTARLFSRHGAKVVIADIQDNLGQSVCKELSSPTS 658

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
           +    S+VHCDVT EKD+ENA+N AV++YGKLDIMFNNAGIV E+KPNILDND+ EFE+I
Sbjct: 659 A----SFVHCDVTSEKDVENAINVAVAKYGKLDIMFNNAGIVGESKPNILDNDKTEFEKI 714

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           L+VN+VGAFLGTKHAARVM PAG GSII+TASVC  +GGV SHAYTSSKH VVGL +N A
Sbjct: 715 LNVNVVGAFLGTKHAARVMIPAGNGSIITTASVCSTVGGVASHAYTSSKHAVVGLARNAA 774

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           VELG++GIRVNCVSPY V +P+AK F KLDDD
Sbjct: 775 VELGKYGIRVNCVSPYLVVTPLAKDFFKLDDD 806

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565739|ref|XP_002523859.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223536947|gb|EEF38585.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 155/205 (75%), Positives = 180/205 (87%), Gaps = 4/205 (1%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVALITG A  IGECAARLFSKHGA ++IAD++D+LG SVC ++ S SS     SY
Sbjct: 13  RLEGKVALITGAASGIGECAARLFSKHGANLVIADVQDELGHSVCRELDSPSS----VSY 68

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +HC+VT+E+D+ENAVNTAVS+YGKLDIMFNNAG+V  AKPNILDND+AEFE+I+SVNLVG
Sbjct: 69  IHCNVTREEDVENAVNTAVSKYGKLDIMFNNAGVVGIAKPNILDNDKAEFEKIISVNLVG 128

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLGTKHAARVM P  +GSII+TASVC +IGGV SHAYTSSKHGVVGL +NTAVELGR G
Sbjct: 129 AFLGTKHAARVMIPNRKGSIINTASVCSIIGGVASHAYTSSKHGVVGLTRNTAVELGRHG 188

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPY V++P+AK F KLDDD
Sbjct: 189 IRVNCVSPYLVATPLAKDFFKLDDD 213

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479542|ref|XP_002272280.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 148/205 (72%), Positives = 174/205 (84%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            LQGKVALITGGA  IGE  ARLFS+HGAKV+IADI+D+LG SVC+D+S +S+S     +
Sbjct: 73  WLQGKVALITGGASGIGESTARLFSRHGAKVVIADIQDNLGLSVCKDLSPTSAS-----F 127

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVT EK++ENAVN AV+ +GKLDIMFNNAGI  EAKP+ILDND+ EFER+L+VN+VG
Sbjct: 128 VHCDVTNEKEVENAVNLAVATHGKLDIMFNNAGIAGEAKPHILDNDKTEFERVLNVNVVG 187

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLGTKHAARVM PAG GSII+TASVC  +GG  SHAYTSSKH VVGL +N AVELG++G
Sbjct: 188 AFLGTKHAARVMIPAGNGSIITTASVCSTVGGGASHAYTSSKHAVVGLARNAAVELGKYG 247

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPY V++P+AK   KLDDD
Sbjct: 248 IRVNCVSPYLVATPLAKDLFKLDDD 272

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499080|gb|AFK37606.1| unknown [Medicago truncatula]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 145/205 (70%), Positives = 169/205 (82%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVALITGGA  IGE  ARLFS HGA+V+IADI+DD+G S+C+++  SS++     Y
Sbjct: 13  RLEGKVALITGGASGIGEATARLFSNHGAQVVIADIQDDIGHSICQELHKSSAT-----Y 67

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVTKEKDIENAVNT VS++GKLDIMFNNAGI    K NIL+N  +EF+ ++ +NL G
Sbjct: 68  VHCDVTKEKDIENAVNTTVSKHGKLDIMFNNAGITGINKTNILENKLSEFQEVIDINLTG 127

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FLGTKHAARVM P  RGSII+TASVCG IGGV SHAYTSSKH VVGLMKNTA+ELG +G
Sbjct: 128 VFLGTKHAARVMTPVRRGSIINTASVCGCIGGVASHAYTSSKHAVVGLMKNTAIELGPYG 187

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPY V +P+AK F KLDDD
Sbjct: 188 IRVNCVSPYVVGTPLAKNFFKLDDD 212

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133572|ref|XP_002327628.1| predicted protein [Populus trichocarpa] gi|222836713|gb|EEE75106.1| predicted protein [Populus trichocarpa]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 144/205 (70%), Positives = 174/205 (84%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVALITGG+  IGE  ARLF KHGAKV+IADI+D+LG SVC+++    +S     +
Sbjct: 13  RLEGKVALITGGSSGIGESTARLFVKHGAKVVIADIQDELGHSVCKELEPEPAS-----F 67

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +HCDVT+EKD+ENAVNTAVS+YGKLDIMFNNAG     K NI++ND+AEFE+I+  NLVG
Sbjct: 68  IHCDVTQEKDVENAVNTAVSKYGKLDIMFNNAGTGGTPKTNIIENDKAEFEKIICANLVG 127

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLGTKHAARVM PA RGSII+TASVC +IGG +SHAYTSSKHGV+GLM+NTAVELG++G
Sbjct: 128 AFLGTKHAARVMIPARRGSIITTASVCAIIGGGSSHAYTSSKHGVLGLMRNTAVELGQYG 187

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPYAV +P+ K F K++DD
Sbjct: 188 IRVNCVSPYAVPTPLFKNFFKMNDD 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544754|ref|XP_003540812.1| PREDICTED: momilactone A synthase-like [Glycine max]

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 145/205 (70%), Positives = 168/205 (81%), Gaps = 7/205 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVA+ITGGA  IGE  ARLFSKHGA V+IADI+DDLG S+C+ + S+S       Y
Sbjct: 13  RLEGKVAIITGGASGIGEATARLFSKHGAHVVIADIQDDLGLSICKHLESAS-------Y 65

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVT E D+EN VNT VS++GKLDIMFNNAGI    K +ILDN ++EFE +++VNLVG
Sbjct: 66  VHCDVTNETDVENCVNTTVSKHGKLDIMFNNAGITGVNKTSILDNTKSEFEEVINVNLVG 125

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FLGTKHAARVM PA RGSI++TASVCG IGGV SHAYTSSKH VVGL KNTAVELG FG
Sbjct: 126 VFLGTKHAARVMIPARRGSIVNTASVCGSIGGVASHAYTSSKHAVVGLTKNTAVELGAFG 185

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           +RVNCVSPY V++P+AK F KLDDD
Sbjct: 186 VRVNCVSPYVVATPLAKNFFKLDDD 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131800|ref|XP_002328111.1| predicted protein [Populus trichocarpa] gi|222837626|gb|EEE75991.1| predicted protein [Populus trichocarpa]

 Score =  295 bits (755), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 139/210 (66%), Positives = 176/210 (83%), Gaps = 5/210 (2%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           ++++ RL+GKVALITGGA  IGE  AR F KHGAKV+IAD +D+L  SVC+D++S S+S 
Sbjct: 8   STVARRLEGKVALITGGARGIGESTARHFFKHGAKVVIADTQDELAHSVCKDLNSESAS- 66

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
               ++HCDVTKE D+ENAVNTA+S++GKLD+MFNNAGIV   K N++D   +EFE ++ 
Sbjct: 67  ----FIHCDVTKETDVENAVNTAISRHGKLDVMFNNAGIVGVVKTNMVDVSMSEFEEVIR 122

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           VNLVGAFLGTKHAARVMKPA +GSII+T+SVCG++GG  SHAYTSSKHGV+GLM+N AVE
Sbjct: 123 VNLVGAFLGTKHAARVMKPARQGSIITTSSVCGILGGFASHAYTSSKHGVLGLMRNAAVE 182

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           LG+FGIRVNCVSPY V++ M++ FLK+ DD
Sbjct: 183 LGQFGIRVNCVSPYTVATEMSRNFLKMTDD 212

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|330318664|gb|AEC10992.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/205 (71%), Positives = 166/205 (80%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVALITGGA  IGEC ARLFSKHGAKV+IADI+DDLG SVC+D+   S      S+
Sbjct: 13  RLEGKVALITGGASGIGECTARLFSKHGAKVMIADIQDDLGLSVCKDLDEKS-----VSF 67

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVT E  + NAV+ AV+Q+GKLDIM+NNAGIV  AKPNILDND+ EFE+I+ VNLVG
Sbjct: 68  VHCDVTNETHVMNAVDAAVAQFGKLDIMYNNAGIVGLAKPNILDNDKDEFEKIIRVNLVG 127

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLGTK AARVM    RG+II+TASVC  IGGV SHAYTSSKHGV GL KN AVE G+ G
Sbjct: 128 AFLGTKQAARVMILNRRGTIITTASVCSPIGGVASHAYTSSKHGVAGLTKNVAVEFGQHG 187

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPY V +P+AK F KLDD+
Sbjct: 188 IRVNCVSPYLVGTPLAKDFYKLDDE 212

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.939	0.705	0.534	5.8e-50
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.906	0.640	0.505	4.1e-49
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.901	0.562	0.482	2.1e-45
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.901	0.750	0.472	1.2e-44
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.878	0.728	0.489	3.1e-44
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.873	0.727	0.484	1e-43
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.920	0.643	0.446	5.7e-43
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.897	0.644	0.462	1.5e-42
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.873	0.722	0.474	4e-42
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.906	0.646	0.417	2e-40

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 108/202 (53%), Positives = 133/202 (65%)

Query:     8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
             S RL GKVALITGGA  IGE   RLF KHGAKV I D++DDLG  VC+ +          
Sbjct:    15 SQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAF 74

Query:    68 SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
              ++H DV  E DI NAV+ AV  +G LDI+ NNAG+     P+I +   +EFE    VN+
Sbjct:    75 -FIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNV 133

Query:   128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
              GAFL  KHAARVM P  +GSI+S  SV GV+GGV  H+Y  SKH V+GL ++ A ELG+
Sbjct:   134 KGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQ 193

Query:   188 FGIRVNCVSPYAVSSPMAKGFL 209
              GIRVNCVSPYAV++ +A   L
Sbjct:   194 HGIRVNCVSPYAVATKLALAHL 215

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 100/198 (50%), Positives = 139/198 (70%)

Query:    10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
             RL+GKVA+ITGGA  IG+    LF++HGA V+IAD+ +  G S+ + +          ++
Sbjct:    31 RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPM-VAF 89

Query:    70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN--ILDNDQAEFERILSVNL 127
             + CDV+ E D+EN VN  V++YG+LDI+FNNAG++ + K +  ILD D  EF+ ++ VN+
Sbjct:    90 ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query:   128 VGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
              G  LG KH AR M   G +G IISTASV GV+GG+  HAYT+SKH +VGL KN A ELG
Sbjct:   150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query:   187 RFGIRVNCVSPYAVSSPM 204
             ++GIRVNC+SP+ V++ M
Sbjct:   210 KYGIRVNCISPFGVATSM 227

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 96/199 (48%), Positives = 135/199 (67%)

Query:     4 ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXX 63
             ++S S +L+GKVALITGGA  IG+  A  F  HGAKV+IADI+  +G    +++      
Sbjct:    71 SHSTSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQEL------ 124

Query:    64 ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
                C+Y  CDVTKE DI NAV+ AVS + KLDIM+NNAGI  +  P+I+D D   F++++
Sbjct:   125 GPSCAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVI 184

Query:   124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
             + N+ G   G KHAARVM P   GSII   SV G++GG+  H Y+ SK  V+G++++TA 
Sbjct:   185 NTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTAS 244

Query:   184 ELGRFGIRVNCVSPYAVSS 202
             EL +  IRVNC+SP+A+++
Sbjct:   245 ELCKHRIRVNCISPFAITT 263

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
 Identities = 95/201 (47%), Positives = 136/201 (67%)

Query:    10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
             RL GK+ +ITGGA  IG  + RLF++HGA+V+I D++D+LG++V   I       +  SY
Sbjct:     5 RLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGE-----DKASY 59

Query:    70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              HCDVT E ++ENAV   V +YGKLD++F+NAG++ E   +ILD +  E +R +++NL G
Sbjct:    60 YHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI-EPFVSILDLNLNELDRTIAINLRG 118

Query:   130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                  KHAAR M   G RGSI+ T SV   I G   H YT+SKHG++GL+K+ +  LG++
Sbjct:   119 TAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKY 178

Query:   189 GIRVNCVSPYAVSSPMA-KGF 208
             GIRVN V+P+ V++P+   GF
Sbjct:   179 GIRVNGVAPFGVATPLVCNGF 199

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 96/196 (48%), Positives = 138/196 (70%)

Query:    10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
             RL+GK+ +ITGGA  IG  AARLF+ HGAKV+I D++++LG++V   I       +  S+
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGK-----DKASF 59

Query:    70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
               CDVT E ++E+AV   V ++GKLD++F+NAG+++  + + LD D   F+RI++VN+ G
Sbjct:    60 YRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLE-SFLDFDLERFDRIMAVNVRG 118

Query:   130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             A    KHAAR M   G RGSI+ T SV   IGG   H YT+SKHG+VGL+++   +LG++
Sbjct:   119 AAAFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKY 177

Query:   189 GIRVNCVSPYAVSSPM 204
             GIRVN V+PYAV++PM
Sbjct:   178 GIRVNGVAPYAVATPM 193

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 94/194 (48%), Positives = 134/194 (69%)

Query:    10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
             RL GK+A+ITGGA  IG  A RLF+ HGAKV+I D +++LG++V   +       +  S+
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGK-----DKASF 59

Query:    70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
               CDVT EK++ENAV   V +YGKLD++F+NAG++++   + LD +  +F+R ++VN+ G
Sbjct:    60 YRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG-SFLDLNLEQFDRTMAVNVRG 118

Query:   130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             A    KHAAR M   G RGSI+ T SV   IGG   HAYT+SKH ++GL+K+    LG++
Sbjct:   119 AAAFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKY 178

Query:   189 GIRVNCVSPYAVSS 202
             GIRVN V+PYAV++
Sbjct:   179 GIRVNGVAPYAVAT 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 91/204 (44%), Positives = 129/204 (63%)

Query:     8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
             S +L+GKVALITGGA  +G+  A  F +HGA+V+IAD+  + G    +++       +  
Sbjct:    38 SKKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKEL------GSEA 91

Query:    68 SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP-NILDNDQAEFERILSVN 126
              +V CDVT E DI  AV   V +YGKLD+M+NNAGIV    P +I   D  EFER++ +N
Sbjct:    92 EFVRCDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRIN 151

Query:   127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
             + G   G KHAA+ M PA  G I+ T+SV GV GG+  H+YT SK    G++K+ A EL 
Sbjct:   152 VFGVVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELC 211

Query:   187 RFGIRVNCVSPYAVSSPMAKGFLK 210
               G+R+NC+SP  V++P+   +L+
Sbjct:   212 EHGVRINCISPGTVATPLTLSYLQ 235

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 92/199 (46%), Positives = 135/199 (67%)

Query:    11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
             L GK+A+ITGGA  IG  A RLF+ HGAKV+I DI+++LG+++   I       +  S+ 
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGL-----DKASFY 98

Query:    71 HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
              C+VT E D+ENAV   V ++GKLD++F+NAG++ EA  ++LD D   F+R ++VN+ GA
Sbjct:    99 RCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVL-EAFGSVLDLDLEAFDRTMAVNVRGA 157

Query:   131 FLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
                 KHAAR M  +G RGSI+ T S+   IGG   H+YT+SKH ++GL+++    LG++G
Sbjct:   158 AAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYG 217

Query:   190 IRVNCVSPYAVSSPMAKGF 208
             IRVN V+PY V++ M   +
Sbjct:   218 IRVNGVAPYGVATGMTSAY 236

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 92/194 (47%), Positives = 133/194 (68%)

Query:    10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
             RL GK+ +ITGGA  IG  AARLF+ HGAKV+I D++++LG++V   I       +  S+
Sbjct:     5 RLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGL-----DKASF 59

Query:    70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
               CD+T E ++ENAV   V ++GKLD++F+NAG++ E   +ILD D   F+R ++VN+ G
Sbjct:    60 YRCDITDETEVENAVKFTVEKHGKLDVLFSNAGVM-EPHGSILDLDLEAFDRTMAVNVRG 118

Query:   130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             A    KHAAR M  +G RGSI+ T SV   IGG   H+YT+SKH ++GL+++    LG++
Sbjct:   119 AAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKY 178

Query:   189 GIRVNCVSPYAVSS 202
             GIRVN V+PY V++
Sbjct:   179 GIRVNGVAPYGVAT 192

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 84/201 (41%), Positives = 132/201 (65%)

Query:     5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXA 64
             ++ S +L+GKVA+ITGGA  IG+  A  F   GA+V+I DI ++ G  V  ++       
Sbjct:    30 STSSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATEL------G 83

Query:    65 NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-VDEAKPNILDNDQAEFERIL 123
             +   ++ CDVT+E+ I  AV TAV+++GKLD+M N+AGI    + P+I D D   +++++
Sbjct:    84 SAAHFLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVM 143

Query:   124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
              +N+ G  LG KHAAR M PAG GSI+  +S+ G++GG+  HAY+ SK  + G++K  A 
Sbjct:   144 RLNVRGTVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVAS 203

Query:   184 ELGRFGIRVNCVSPYAVSSPM 204
             EL + G+R+NC+SP  + +P+
Sbjct:   204 ELCKHGLRINCISPAGIPTPL 224

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SCU0	SDR2A_ARATH	1, ., 1, ., 1, ., -	0.5202	0.9065	0.6402	yes	no
Q7FAE1	MOMAS_ORYSJ	1, ., 1, ., 1, ., 2, 9, 5	0.5658	0.9345	0.7299	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.295	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.n1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.47	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00660144 hypothetical protein (271 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-91
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-82
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-58
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-56
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-56
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-53
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-53
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-52
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	5e-52
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-51
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-49
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-47
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-45
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-44
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-44
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-43
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-42
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-42
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-41
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-41
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-41
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-41
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-41
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-40
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-40
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-40
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-39
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-39
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-39
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-39
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	5e-39
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	9e-39
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-38
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-38
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-37
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-37
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-37
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-37
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-37
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-36
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-35
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-35
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-35
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	3e-35
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-35
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-34
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-34
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-34
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	6e-34
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-34
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-34
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	1e-33
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-33
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-33
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-33
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	4e-33
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-33
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-32
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-32
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-32
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-32
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-32
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	2e-32
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-32
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-32
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-32
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-32
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	6e-32
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	8e-32
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-31
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-31
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-31
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	4e-31
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-31
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-30
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-30
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-30
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-30
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-30
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	6e-30
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	8e-30
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-29
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-29
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-29
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	4e-29
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-29
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-29
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	6e-29
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-29
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-28
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-28
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-28
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-28
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	7e-28
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	8e-28
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	9e-28
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-27
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-27
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-27
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-26
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-26
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	6e-26
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	9e-26
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-25
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-25
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-25
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-25
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-25
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-25
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	3e-25
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-25
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-25
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	5e-25
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-24
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-24
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-24
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-24
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	5e-24
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	8e-24
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	8e-24
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-23
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-23
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	6e-23
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	7e-23
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	7e-23
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-23
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	7e-23
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-22
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	5e-22
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-21
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-21
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-21
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-21
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-21
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	4e-21
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-21
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	8e-21
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-20
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-20
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	4e-20
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	7e-20
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	8e-20
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	8e-20
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	8e-20
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-19
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-19
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-19
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	4e-19
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-19
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	9e-19
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-18
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-18
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-18
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-18
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-18
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-18
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-18
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	6e-18
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	8e-18
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-17
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-17
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-17
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-16
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-16
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-16
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	4e-16
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-16
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	6e-16
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-15
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-15
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-15
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-15
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-15
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	5e-15
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	6e-15
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	9e-15
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-14
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	7e-14
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	7e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	8e-14
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-13
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-13
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	4e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-13
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-13
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	7e-13
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-12
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-12
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	7e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-11
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	1e-11
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-11
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-11
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-11
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-10
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	1e-10
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-10
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-10
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-10
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-10
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-10
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-10
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-10
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-10
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	5e-10
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	5e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	9e-10
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-09
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-09
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	4e-09
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-09
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	7e-09
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-08
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-08
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	1e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-08
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-08
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	2e-08
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-08
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	3e-08
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-08
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	3e-08
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-08
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	8e-08
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	7e-07
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-06
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	1e-06
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-06
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	4e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-06
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	9e-06
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	9e-06
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-05
PRK07904	253	PRK07904, PRK07904, short chain dehydrogenase; Pro	1e-05
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	3e-05
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-05
pfam08659	181	pfam08659, KR, KR domain	3e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	5e-05
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	8e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	9e-05
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	2e-04
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	3e-04
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	4e-04
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	5e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	6e-04
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	7e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	8e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	8e-04
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	9e-04
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	0.001
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.001
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.002
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.002
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	0.003
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  267 bits (684), Expect = 3e-91
 Identities = 117/205 (57%), Positives = 152/205 (74%), Gaps = 5/205 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GKVA+ITGGA  IGE  ARLF+KHGA+V+IADI DD G++V  ++     S     +
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDIS-----F 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVT E D+  AV+TAV+++G+LDIMFNNAG++     +IL+    EFER+L VN+ G
Sbjct: 56  VHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYG 115

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLGTKHAARVM PA +GSI+S ASV GV+GG+  HAYT+SKH V+GL ++ A ELG  G
Sbjct: 116 AFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHG 175

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVNCVSPY V++P+      ++D+
Sbjct: 176 IRVNCVSPYGVATPLLTAGFGVEDE 200

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  245 bits (626), Expect = 6e-82
 Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 4/210 (1%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS 63
           ++  S RL GKVAL+TGGA  IGE   RLF KHGAKV I D++DDLG++VC+    S   
Sbjct: 9   SSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD----SLGG 64

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
                + HCDVT E D+  AV+  V ++G LDIM NNAG+     P+I + + +EFE++ 
Sbjct: 65  EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVF 124

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
            VN+ G FLG KHAAR+M P  +GSI+S  SV   IGG+  HAYT SKH V+GL ++ A 
Sbjct: 125 DVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAA 184

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           ELG+ GIRVNCVSPYAV + +A   L  D+
Sbjct: 185 ELGKHGIRVNCVSPYAVPTALALAHLPEDE 214

Length = 280

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  182 bits (464), Expect = 9e-58
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 5/199 (2%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
             LQGK AL+TG +  IG   A   +  GAKV+I D  ++  E++  ++ ++   A    
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEA---R 57

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            +  DV+ E  +   +  AV  +G LDI+ NNAGI  +A   +    + +++R++ VNL 
Sbjct: 58  VLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDAL--LPRMSEEDWDRVIDVNLT 115

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G F   + A   M  A  G I++ +SV GV G      Y+++K GV+G  K  A+EL   
Sbjct: 116 GTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASR 175

Query: 189 GIRVNCVSPYAVSSPMAKG 207
           GI VN V+P  + + M +G
Sbjct: 176 GITVNAVAPGFIDTDMTEG 194

Length = 246

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  178 bits (454), Expect = 2e-56
 Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 6/199 (3%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
           AL+TG +  IG   AR  ++ GAKV++AD  ++    +        +       V  DV+
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA----IEALGGNAVAVQADVS 56

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
            E+D+E  V  A+ ++G+LDI+ NNAGI       + +    +++R+L VNL G FL T+
Sbjct: 57  DEEDVEALVEEALEEFGRLDILVNNAGIA--RPGPLEELTDEDWDRVLDVNLTGVFLLTR 114

Query: 136 HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
            A   MK  G G I++ +SV G+       AY +SK  + GL ++ A+EL  +GIRVN V
Sbjct: 115 AALPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAV 174

Query: 196 SPYAVSSPMAKGFLKLDDD 214
           +P  V +PM       + +
Sbjct: 175 APGLVDTPMLAKLGPEEAE 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  178 bits (453), Expect = 4e-56
 Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 5/206 (2%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
            RL+GKVA++TG +  IGE  AR F+  GA+V++ D  ++  E V  +I +   +     
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAI---- 56

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DV+ E D+E AV  A+ ++G +DI+ NNAG      P +LD D+AEF+RI +VN+ 
Sbjct: 57  AVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGP-LLDVDEAEFDRIFAVNVK 115

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             +L T+ A   M+  G G+I++ AS  G+        Y +SK  V+ L K  A ELG  
Sbjct: 116 SPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPD 175

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
            IRVN V+P  V + + + F+     
Sbjct: 176 KIRVNAVAPVVVETGLLEAFMGEPTP 201

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  171 bits (435), Expect = 3e-53
 Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 5/195 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+GKVAL+TG A  IG   A   +K GAKV+IAD+ D+   +  E +  +   A     
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKA---IG 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DVT E+ I   ++ AV  +G +DI+ NNAGI   A   I D    ++++++++ L G
Sbjct: 58  VAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVA--PIEDFPTEKWKKMIAIMLDG 115

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFL TK A  +MK  G G II+ ASV G++G     AY S+KHG++GL K  A+E    G
Sbjct: 116 AFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHG 175

Query: 190 IRVNCVSPYAVSSPM 204
           + VN + P  V +P+
Sbjct: 176 VTVNAICPGYVDTPL 190

Length = 258

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  170 bits (432), Expect = 4e-53
 Identities = 79/203 (38%), Positives = 116/203 (57%), Gaps = 10/203 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVA++TGGA  +G   ARL    GAKV+++DI D+ G++   ++  ++       +
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAAR------F 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            H DVT E      V+TA   +G+LD++ NNAGI+      +      E+ R+L +NL G
Sbjct: 56  FHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGG--TVETTTLEEWRRLLDINLTG 113

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG--R 187
            FLGT+     MK AG GSII+ +S+ G++G     AY +SK  V GL K+ A+E     
Sbjct: 114 VFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQG 173

Query: 188 FGIRVNCVSPYAVSSPMAKGFLK 210
           +GIRVN V P  + +PM    L 
Sbjct: 174 YGIRVNSVHPGYIYTPMTDELLI 196

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  169 bits (430), Expect = 1e-52
 Identities = 76/201 (37%), Positives = 112/201 (55%), Gaps = 9/201 (4%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           +S RL G+VA+ITGG   IG   AR  +  GA V++ DI  + G++  +++        G
Sbjct: 1   LSQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV--------G 52

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             +V  DVT E  +    +TA   YG +DI FNNAGI      +IL+     ++R+  VN
Sbjct: 53  GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVN 112

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVEL 185
           L   +L  K A   M   G+GSII+TAS   V+G  TS  +YT+SK GV+ + +   V+ 
Sbjct: 113 LTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQF 172

Query: 186 GRFGIRVNCVSPYAVSSPMAK 206
            R GIRVN + P  V++P+ +
Sbjct: 173 ARQGIRVNALCPGPVNTPLLQ 193

Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  168 bits (426), Expect = 5e-52
 Identities = 79/208 (37%), Positives = 117/208 (56%), Gaps = 4/208 (1%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           MS    GKVAL+TGGA  IG   A  F++ GAKV++AD     GE     I  +   A  
Sbjct: 1   MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEA-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             +V CDVT++ +++  V   ++ YG+LD  FNNAGI  E +  + +  +AEF+ I+ VN
Sbjct: 59  -LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE-QGRLAEGSEAEFDAIMGVN 116

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G +L  K+   +M   G G+I++TASV G+        Y +SKH V+GL K+ A+E  
Sbjct: 117 VKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYA 176

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           + GIRVN V P  + + M +   + D  
Sbjct: 177 KKGIRVNAVCPAVIDTDMFRRAYEADPR 204

Length = 253

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  166 bits (423), Expect = 1e-51
 Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 6/200 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCS 68
           +L GKVA++TG +G IG   A L +K GAKV+IA DI ++  + + E+I      A    
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDA---I 58

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DV+ E+D+EN V   V ++GK+DI+ NNAGI +     + D    E++R++ VNL 
Sbjct: 59  AVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGL-VTDMTDEEWDRVIDVNLT 116

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G  L T++A   M     G I++ +S+ G+IG      Y++SK  V    K  A EL   
Sbjct: 117 GVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPS 176

Query: 189 GIRVNCVSPYAVSSPMAKGF 208
           GIRVN V+P A+ + M   F
Sbjct: 177 GIRVNAVAPGAIDTEMWSSF 196

Length = 247

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  160 bits (407), Expect = 3e-49
 Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 6/198 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+G+VAL+TG A  IG   A   +  GA+V++ DI  D   +  E + ++   A     
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARA--- 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DV     ++ AV   V  +G+LDI+  NAGI        +D++Q  +ER++ VNL G
Sbjct: 60  RQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQ--WERVIDVNLTG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-SHAYTSSKHGVVGLMKNTAVELGRF 188
            FL T+ A   +  AG G I+ T+SV G   G      Y +SK G+VG  +  A+EL   
Sbjct: 118 TFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAAR 177

Query: 189 GIRVNCVSPYAVSSPMAK 206
            I VN V P  V +PMA 
Sbjct: 178 NITVNSVHPGGVDTPMAG 195

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  156 bits (395), Expect = 2e-47
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCS 68
            L GKVAL+TG +  IG   AR  ++ GA+ V+ A   ++            +      +
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGR-AA 60

Query: 69  YVHCDVT-KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            V  DV+  E+ +E  V  A  ++G++DI+ NNAGI     P + +  + +++R++ VNL
Sbjct: 61  AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAP-LEELTEEDWDRVIDVNL 119

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           +GAFL T+ A  +MK   +  I++ +SV G+ G     AY +SK  ++GL K  A+EL  
Sbjct: 120 LGAFLLTRAALPLMK---KQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            GIRVN V+P  + +PM       + +
Sbjct: 177 RGIRVNAVAPGYIDTPMTAALESAELE 203

Length = 251

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  150 bits (380), Expect = 3e-45
 Identities = 80/205 (39%), Positives = 114/205 (55%), Gaps = 11/205 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GKVA++TG     GE  AR F++ GA+V+IADI  D  E V        ++  G + 
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV--------AADIGEAA 53

Query: 70  VHC--DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
           +    DVTK  D+E  V  A+S++G+LDI+ NNAGI    KP +L+ D+ EF+R+ +VN+
Sbjct: 54  IAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKP-MLEVDEEEFDRVFAVNV 112

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
              +L  +     M+  G G II+ AS  G+        Y +SK  VV   K  AVEL  
Sbjct: 113 KSIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAP 172

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLD 212
             IRVNC+ P A  +P+   F+  D
Sbjct: 173 RNIRVNCLCPVAGETPLLSMFMGED 197

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  148 bits (376), Expect = 1e-44
 Identities = 71/208 (34%), Positives = 109/208 (52%), Gaps = 13/208 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCS 68
            L+GKVAL+TG +  IG   A   +  GA V+I     + G E++  +I      A G  
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG-----ALGGK 56

Query: 69  Y--VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DV+  + +E AV+ A +++G +DI+ NNAGI  +    ++   + +++R++  N
Sbjct: 57  ALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDN--LLMRMKEEDWDRVIDTN 114

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G F  TK  AR M     G II+ +SV G++G      Y +SK GV+G  K+ A EL 
Sbjct: 115 LTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA 174

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             GI VN V+P  + + M      L +D
Sbjct: 175 SRGITVNAVAPGFIETDM---TDALPED 199

Length = 248

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  148 bits (376), Expect = 2e-44
 Identities = 77/201 (38%), Positives = 121/201 (60%), Gaps = 4/201 (1%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
            + KV LITGG   +G   A   +K GAK+ + D+ ++  E+    +   +  A     +
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLL-I 59

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
             DV+ E  +E  V+  V Q+G++D  FNNAGI  E K N+ ++    EF++++S+NL G
Sbjct: 60  KADVSDEAQVEAYVDATVEQFGRIDGFFNNAGI--EGKQNLTEDFGADEFDKVVSINLRG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F G +   +VM+  G G I++TASV G+ G      Y ++KHGVVGL +N+AVE G++G
Sbjct: 118 VFYGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYG 177

Query: 190 IRVNCVSPYAVSSPMAKGFLK 210
           IR+N ++P A+ +PM +G LK
Sbjct: 178 IRINAIAPGAILTPMVEGSLK 198

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  145 bits (369), Expect = 2e-43
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 6/199 (3%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANG 66
              L G+VAL+TG A  +G   A   ++ GA V++     ++  E + E + +    A  
Sbjct: 1   MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRA-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DVT +  +E AV  AV ++G++DI+ NNAGI ++    + D    E++ ++ VN
Sbjct: 59  -QAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKP--LADMSDDEWDEVIDVN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G F   +     M+    G I++ +SV G+ G      Y ++K G+VGL K  A EL 
Sbjct: 116 LSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA 175

Query: 187 RFGIRVNCVSPYAVSSPMA 205
            +GI VN V+P  + + M 
Sbjct: 176 EYGITVNMVAPGDIDTDMK 194

Length = 249

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  144 bits (364), Expect = 1e-42
 Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 11/200 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G   L+TGGA  IG   A  F++ GA+V + D+ +    +    +  +  +A      
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTA-----T 63

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN--ILDNDQAEFERILSVNLV 128
             DV     +E   +TAV ++G LD++ NNAGI   A P   I +    ++E+ L+VNL 
Sbjct: 64  VADVADPAQVERVFDTAVERFGGLDVLVNNAGI---AGPTGGIDEITPEQWEQTLAVNLN 120

Query: 129 GAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           G F   + A  ++K +G G  II+ +SV G +G      Y +SK  VVGL+K+ A+ELG 
Sbjct: 121 GQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGP 180

Query: 188 FGIRVNCVSPYAVSSPMAKG 207
            GIRVN + P  V  P  + 
Sbjct: 181 LGIRVNAILPGIVRGPRMRR 200

Length = 264

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  142 bits (360), Expect = 4e-42
 Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 5/192 (2%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GK AL+TG A  IG   AR  +  GA V++ D  ++  E+  +    +  S         
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPA--- 57

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DVTKE +I + +  A +++G LDI+ NNAGI   A   I +    +++RI++V L  AF 
Sbjct: 58  DVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAP--IEEFPPEDWDRIIAVMLTSAFH 115

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
             + A   MK  G G II+ AS  G++      AY ++KHG++GL K  A+E+   GI V
Sbjct: 116 TIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITV 175

Query: 193 NCVSPYAVSSPM 204
           N + P  V +P+
Sbjct: 176 NAICPGYVRTPL 187

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 1e-41
 Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 8/197 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GKVA++TGGA  IG   A LF+  GA+V + D  +D    V   +   ++       
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED-VAEVAAQLLGGNAKG----- 65

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           + CDV+  + +E AV   +S +G++DI+ N+AG+   A     D  + ++++ + +NL G
Sbjct: 66  LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPA--EDVSEEDWDKTIDINLKG 123

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           +FL  +   R M  AG G I++ AS  GV+      AY +SK GVVG+ K  A+E G +G
Sbjct: 124 SFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYG 183

Query: 190 IRVNCVSPYAVSSPMAK 206
           I VN +SP  V + + K
Sbjct: 184 ITVNAISPTVVLTELGK 200

Length = 255

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  141 bits (357), Expect = 1e-41
 Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 5/197 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVAL+TG +  IG   A   ++ GA ++I    ++  E   + I          +  
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGV---EATAF 59

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV+ E+ I+ AV      +GK+DI+ NNAGI+   +    +  +AE+  ++ VNL G 
Sbjct: 60  TCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGII--RRHPAEEFPEAEWRDVIDVNLNGV 117

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  ++  AR M   G G II+  S+   +GG    AY +SK GV GL K  A E  R GI
Sbjct: 118 FFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGI 177

Query: 191 RVNCVSPYAVSSPMAKG 207
           +VN ++P   ++ M + 
Sbjct: 178 QVNAIAPGYFATEMTEA 194

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 1e-41
 Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 9/196 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RLQGKVAL+TG A  IGE  A  +   GA+V+IADIK         +I            
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP------AAIA 56

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DVT++  I+  V  AV ++G +DI+FNNA + D A   ILD  +  ++R+ +VN+ G
Sbjct: 57  VSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAP--ILDISRDSYDRLFAVNVKG 114

Query: 130 AFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            F   +  AR M   GRG  II+ AS  G  G      Y ++K  V+   ++ A+ L R 
Sbjct: 115 LFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRH 174

Query: 189 GIRVNCVSPYAVSSPM 204
           GI VN ++P  V +PM
Sbjct: 175 GINVNAIAPGVVDTPM 190

Length = 257

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  139 bits (353), Expect = 4e-41
 Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 17/206 (8%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           G VA++TGGA  +G          GAKV+I D+ +  GE+V +         + C +V  
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLG-------DNCRFVPV 54

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVNLV 128
           DVT EKD++ A+  A +++G+LDI+ N AGI   AK       Q      F+R+++VNL+
Sbjct: 55  DVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLI 114

Query: 129 GAF----LGTKHAARVMKPAG--RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           G F    L      +     G  RG II+TASV    G +   AY++SK G+VG+    A
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIA 174

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGF 208
            +L   GIRV  ++P    +P+  G 
Sbjct: 175 RDLAPQGIRVVTIAPGLFDTPLLAGL 200

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  138 bits (351), Expect = 5e-41
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 9/200 (4%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDV 74
           AL+TG +  IG   A   +K GAKV+I     +   E V E++ +    A G   V CDV
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALG---VVCDV 57

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           +  +D++  V     + G +DI+ NNAGI  +    ++   + +++ ++  NL G F  T
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGITRDNL--LMRMKEEDWDAVIDTNLTGVFNLT 115

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           +   R+M     G II+ +SV G++G      Y +SK GV+G  K+ A EL    I VN 
Sbjct: 116 QAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNA 175

Query: 195 VSPYAVSSPMAKGFLKLDDD 214
           V+P  + + M     KL + 
Sbjct: 176 VAPGFIDTDMTD---KLSEK 192

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  138 bits (350), Expect = 1e-40
 Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           KVAL+TG +  IG   A   +  GAKV + D  ++      E+I +   +A     +  D
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAA---LEAD 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLVGAFL 132
           V+  + +E  V    +++G +DI+ NNAGI  D     + + D   ++ +++VNL G F 
Sbjct: 58  VSDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEED---WDAVINVNLTGVFN 114

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            T+   R M     G II+ +SV G+IG      Y +SK GV+G  K+ A EL   GI V
Sbjct: 115 VTQAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITV 174

Query: 193 NCVSPYAVSSPM 204
           N V+P  + + M
Sbjct: 175 NAVAPGFIDTDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 1e-40
 Identities = 70/201 (34%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M  RL GKVAL+TG A  IG   AR F++ GA V +AD+   L E     I+   + A  
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGAR- 59

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DVT    +  AV  A   +G LD++ NNAGI   A P  L     ++ R  +V+
Sbjct: 60  VLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP--LAMTDEDWRRCFAVD 117

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCG--VIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           L GA+ G +     M   GRGSI++ AS     +I G     Y  +KHG++GL +   +E
Sbjct: 118 LDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG--CFPYPVAKHGLLGLTRALGIE 175

Query: 185 LGRFGIRVNCVSPYAVSSPMA 205
                +RVN ++P  + + + 
Sbjct: 176 YAARNVRVNAIAPGYIETQLT 196

Length = 260

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  137 bits (348), Expect = 3e-40
 Identities = 73/201 (36%), Positives = 104/201 (51%), Gaps = 5/201 (2%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
            RL GKVA+ITG +  IG  AA+LF++ GAKV++   +    + +  +I +    A    
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEA---V 58

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            +  DV  E   +  V  AV ++G LDI FNNAG + E  P + +     +   L+ NL 
Sbjct: 59  ALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGP-VAEMSLEGWRETLATNLT 117

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS-HAYTSSKHGVVGLMKNTAVELGR 187
            AFLG KH    M   G GS+I T++  G   G     AY +SK G++GL +  A E G 
Sbjct: 118 SAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGA 177

Query: 188 FGIRVNCVSPYAVSSPMAKGF 208
            GIRVN + P    +PM +  
Sbjct: 178 QGIRVNALLPGGTDTPMGRAM 198

Length = 254

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  136 bits (344), Expect = 1e-39
 Identities = 63/209 (30%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           +   R   KV ++TGG+  IG    R F ++GAKV+     +  G+++  +++ +     
Sbjct: 2   ASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPG-- 59

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
            C +V CDVTKE+DI+  ++  V ++G++D + NNAG     +    +    EF  +L++
Sbjct: 60  SCKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQT-TDETSAQEFRDLLNL 118

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL+  FL +K+A   ++ + +G+II+ +S+ G IG   +  Y ++K  +  + K  AV+ 
Sbjct: 119 NLISYFLASKYALPHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDE 177

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            R+G+RVNC+SP  + +P+ +       D
Sbjct: 178 SRYGVRVNCISPGNIWTPLWEELAAQTPD 206

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  135 bits (342), Expect = 2e-39
 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 7/198 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSY 69
           L+GKVAL+TG +  IG+  A   +  GA V++      D  E V E+I +    A     
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKA---IA 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV+KE+D+     +A+ ++G LDI+ NNAG+  +   +  +    ++ +++ VNL G
Sbjct: 58  VQADVSKEEDVVALFQSAIKEFGTLDILVNNAGL--QGDASSHEMTLEDWNKVIDVNLTG 115

Query: 130 AFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            FL  + A +   K   +G II+ +SV   I       Y +SK GV  + K  A E    
Sbjct: 116 QFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPK 175

Query: 189 GIRVNCVSPYAVSSPMAK 206
           GIRVN ++P A+++P+  
Sbjct: 176 GIRVNAIAPGAINTPINA 193

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 3e-39
 Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 9/206 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL G+VA++TG    IG   A+LF++ GA+V++AD   +  E V   I+     A G ++
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-----AGGRAF 56

Query: 70  VH-CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
               DV   + +E  V+   +++G+LD++ NNAG        ++  D+A+++ ++ VN+ 
Sbjct: 57  ARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG--TVVTTDEADWDAVMRVNVG 114

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G FL  K+A  +M+  G GSI++TAS   + GG    AY +SK  +  L +  A++    
Sbjct: 115 GVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATD 174

Query: 189 GIRVNCVSPYAVSSPM-AKGFLKLDD 213
           GIRVN V+P  + +P   + F +  D
Sbjct: 175 GIRVNAVAPGTIDTPYFRRIFARHAD 200

Length = 252

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  141 bits (359), Expect = 4e-39
 Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 7/191 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GKVAL+TG AG IG+  A+  +  GA V++AD+ ++  E+   ++     +      V
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALG----V 475

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDVT E  ++ A   A   +G +DI+ +NAGI       I +    ++ R   VN  G 
Sbjct: 476 ACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGP--IEETSDEDWRRSFDVNATGH 533

Query: 131 FLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           FL  + A R+MK  G G SI+  AS   V  G    AY ++K   + L++  A+ELG  G
Sbjct: 534 FLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDG 593

Query: 190 IRVNCVSPYAV 200
           IRVN V+P AV
Sbjct: 594 IRVNGVNPDAV 604

Length = 681

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  134 bits (339), Expect = 5e-39
 Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 7/194 (3%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVH 71
            KVA+ITG A  IG   A   +  G  +++AD+  ++  +S  ++IS +  +A     V 
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNA---VAVG 58

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DVT + D+E  ++ AV ++G  D+M NNAGI     P +L   + + +++ +VN+ G  
Sbjct: 59  ADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIA-PITP-LLTITEEDLKKVYAVNVFGVL 116

Query: 132 LGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            G + AAR  K  G  G II+ +S+ GV G     AY++SK  V GL +  A EL   GI
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGI 176

Query: 191 RVNCVSPYAVSSPM 204
            VN  +P  V + M
Sbjct: 177 TVNAYAPGIVKTEM 190

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  133 bits (337), Expect = 9e-39
 Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 7/202 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           KVA+ITGGA  IG   A+L  K GAKV I D  ++ G +      +    A   ++V CD
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKA---TFVQCD 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           VT  + +  A   A+ ++G++DI+ NNAGI+DE            +E+ + VNL G    
Sbjct: 58  VTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINT 117

Query: 134 TKHAARVMK---PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL-GRFG 189
           T  A   M        G I++  SV G+        Y++SKHGVVG  ++ A  L  + G
Sbjct: 118 TYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTG 177

Query: 190 IRVNCVSPYAVSSPMAKGFLKL 211
           +RVN + P   ++P+    +  
Sbjct: 178 VRVNAICPGFTNTPLLPDLVAK 199

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  132 bits (335), Expect = 2e-38
 Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 10/199 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG--C 67
            L+GKVA++TGG+  IG   AR  ++ GA V I        E   E+++       G   
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAK----KYGVKT 60

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
               CDV+ ++ +E         +GK+DI+  NAGI        LD    ++ +++ VNL
Sbjct: 61  KAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGIT--VHKPALDYTYEQWNKVIDVNL 118

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV--TSHAYTSSKHGVVGLMKNTAVEL 185
            G F   + AA++ K  G+GS+I TAS+ G I        AY +SK  V+ L K+ AVE 
Sbjct: 119 NGVFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEW 178

Query: 186 GRFGIRVNCVSPYAVSSPM 204
            ++ IRVN +SP  + + +
Sbjct: 179 AKYFIRVNSISPGYIDTDL 197

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  132 bits (334), Expect = 4e-38
 Identities = 68/195 (34%), Positives = 113/195 (57%), Gaps = 6/195 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+ KVA+ITG +  IG+ +A   ++ GA VL  DI + + E+V + I S+   A     
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETV-DKIKSNGGKAKA--- 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            H D++ E+ +++  +    Q+G++D++FNNAG VD A   I +     F++I++V++ G
Sbjct: 59  YHVDISDEQQVKDFASEIKEQFGRVDVLFNNAG-VDNAAGRIHEYPVDVFDKIMAVDMRG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FL TK    +M   G GSII+T+S  G    +    Y ++K  V+   K+ A+E GR G
Sbjct: 118 TFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDG 176

Query: 190 IRVNCVSPYAVSSPM 204
           IR N ++P  + +P+
Sbjct: 177 IRANAIAPGTIETPL 191

Length = 272

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  131 bits (332), Expect = 1e-37
 Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 19/204 (9%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
             L+GKV  ITGGA  IG   AR  +  GA+V I D+ + L +    ++           
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVV 53

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN--ILDNDQAEFERILSVN 126
               DVT        ++   +  G +D++ NNAG++    P    LD   A   RIL VN
Sbjct: 54  GGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVM----PVGPFLDEPDAVTRRILDVN 109

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---GGVTSHAYTSSKHGVVGLMKNTAV 183
           + G  LG+K AA  M P GRG +++ AS+ G I   G  T   Y +SKH VVG      +
Sbjct: 110 VYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMAT---YCASKHAVVGFTDAARL 166

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKG 207
           EL   G+ V+ V P  V++ +  G
Sbjct: 167 ELRGTGVHVSVVLPSFVNTELIAG 190

Length = 273

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  130 bits (330), Expect = 1e-37
 Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 5/199 (2%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            +VA++ GG  ++G       ++ G +V +ADI  +   +V ++I++             
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYG-FGA 60

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D T E+ +          +G++D++  NAGI   A   I D    +F+R L VNLVG FL
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF--ITDFQLGDFDRSLQVNLVGYFL 118

Query: 133 GTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             +  +R+M   G +G II   S  G +G   +  Y+++K G VGL ++ A++L  +GI 
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178

Query: 192 VNCVSP-YAVSSPMAKGFL 209
           V+ +     + SPM +  L
Sbjct: 179 VHSLMLGNLLKSPMFQSLL 197

Length = 259

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  129 bits (327), Expect = 3e-37
 Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 12/199 (6%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
           + LITGG   IG   A  F+K GAKV+I DI +   E    ++     +     Y  CDV
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNV---RKAGGKVHYYKCDV 57

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           +K +++  A      + G + I+ NNAG+V  +   +L+    E E+   VN +  F  T
Sbjct: 58  SKREEVYEAAKKIKKEVGDVTILINNAGVV--SGKKLLELPDEEIEKTFEVNTLAHFWTT 115

Query: 135 KHAARVMKPAGRGSIISTASVCGVIG--GVTSHAYTSSKHGVVGLMKNTAVEL---GRFG 189
           K     M     G I++ ASV G+I   G+    Y +SK   VG  ++  +EL   G+ G
Sbjct: 116 KAFLPDMLERNHGHIVTIASVAGLISPAGLA--DYCASKAAAVGFHESLRLELKAYGKPG 173

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           I+   V PY +++ M +G 
Sbjct: 174 IKTTLVCPYFINTGMFQGV 192

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  129 bits (325), Expect = 5e-37
 Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 7/196 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVA++TG    IG   A   ++ GA+V++ADI     ++V   I      A G   +
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI------AGGALAL 54

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT E+ +      AV ++G LD++ NNAG +    P I+D D A +++ +++NL G 
Sbjct: 55  RVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAM-HLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           FL  +HAA  M   G GSI++ +S+ G  G     AY +SK  +  L +  A EL   GI
Sbjct: 114 FLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGI 173

Query: 191 RVNCVSPYAVSSPMAK 206
           R N ++P  + +P+  
Sbjct: 174 RCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  128 bits (323), Expect = 8e-37
 Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 20/201 (9%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
                K  LITG A  IG   AR F   GA+V   D +D                +    
Sbjct: 1   QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK------------PDLSGNFH 48

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           ++  D++      + +         +DI+ N AGI+D+ KP +LD    E++ I   NL 
Sbjct: 49  FLQLDLS------DDLEPLFDWVPSVDILCNTAGILDDYKP-LLDTSLEEWQHIFDTNLT 101

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             FL T+     M     G II+  S+   + G    AYT+SKH + G  K  A++  + 
Sbjct: 102 STFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKD 161

Query: 189 GIRVNCVSPYAVSSPM-AKGF 208
           GI+V  ++P AV +PM A  F
Sbjct: 162 GIQVFGIAPGAVKTPMTAADF 182

Length = 235

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  128 bits (323), Expect = 1e-36
 Identities = 68/195 (34%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVH 71
           GKVAL+TG    IG   AR  +  GA +++    D    E+V   +++         Y  
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVL--YHG 59

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            D++K   IE+ V  A  Q+G +DI+ NNAGI   A   I D    +++ I+++NL   F
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAP--IEDFPTEKWDAIIALNLSAVF 117

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             T+ A   MK  G G II+ ASV G++      AY ++KHGVVGL K  A+E    G+ 
Sbjct: 118 HTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVT 177

Query: 192 VNCVSPYAVSSPMAK 206
            N + P  V +P+ +
Sbjct: 178 CNAICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  126 bits (317), Expect = 1e-35
 Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 6/191 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK A+ITG    IG+  A  F+  GA V+++DI  D    V ++I      A  C  
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACR- 66

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             CD+T E+++    + A+S+ GK+DI+ NNAG      P   D   A+F R   +N+  
Sbjct: 67  --CDITSEQELSALADFALSKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFS 121

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  ++  A  M+  G G I++  S+      +   +Y SSK     L++N A +LG   
Sbjct: 122 FFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKN 181

Query: 190 IRVNCVSPYAV 200
           IRVN ++P A+
Sbjct: 182 IRVNGIAPGAI 192

Length = 255

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 2e-35
 Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 10/190 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK+AL+TG +  IGE  A+L ++ GA V+++  K D  ++V + I ++   A     +
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEA---L 62

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP---NILDNDQAEFERILSVNL 127
            C + + + I+        ++G+LDI+ NNA     A P   +ILD D   F++ + VN+
Sbjct: 63  ACHIGEMEQIDALFAHIRERHGRLDILVNNAA----ANPYFGHILDTDLGAFQKTVDVNI 118

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            G F  +  A ++MK  G GSI++ ASV GV  G     Y+ +K  V+ + K  A E   
Sbjct: 119 RGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAP 178

Query: 188 FGIRVNCVSP 197
           FGIRVN + P
Sbjct: 179 FGIRVNALLP 188

Length = 252

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  124 bits (313), Expect = 3e-35
 Identities = 72/189 (38%), Positives = 105/189 (55%), Gaps = 7/189 (3%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKVAL+TGGA  IG   A+  +  GA V++ADI  ++ E V E       +      V C
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALG----VQC 56

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DVT E  +++A   AV ++G LDI+ +NAGI   +   I +    ++ R + +NL G FL
Sbjct: 57  DVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSS--PIAETSLEDWNRSMDINLTGHFL 114

Query: 133 GTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
            ++ A R+MK  G  G+I+  AS   V  G  + AY+++K     L +  A+E G  GIR
Sbjct: 115 VSREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIR 174

Query: 192 VNCVSPYAV 200
           VN V+P AV
Sbjct: 175 VNTVNPDAV 183

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 3e-35
 Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 10/189 (5%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
             L GKVA++TGGA  IG   AR     GA+V I DI  D G +V   +           
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGE------RAR 55

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           ++  D+T +  IE AV T V+++G++DI+ N A    +     L + +A++   L VNLV
Sbjct: 56  FIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDG---LASSRADWLAALDVNLV 112

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            A +  + A   +   G G+I++  S+           Y +SK  +  L ++ A++L   
Sbjct: 113 SAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPD 171

Query: 189 GIRVNCVSP 197
           GIRVN VSP
Sbjct: 172 GIRVNSVSP 180

Length = 261

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  124 bits (313), Expect = 4e-35
 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 6/198 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           KVAL+TGGA  IG+  A   +K G  V +AD+ ++  +   ++I+ +   A        D
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKA---VAYKLD 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V+ +  + +A++ A  ++G  D+M NNAG V    P IL+  + E +++ +VN+ G   G
Sbjct: 58  VSDKDQVFSAIDQAAEKFGGFDVMVNNAG-VAPITP-ILEITEEELKKVYNVNVKGVLFG 115

Query: 134 TKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            + AAR  K  G  G II+ AS+ G  G     AY+S+K  V GL +  A EL   GI V
Sbjct: 116 IQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITV 175

Query: 193 NCVSPYAVSSPMAKGFLK 210
           N   P  V +PM +   +
Sbjct: 176 NAYCPGIVKTPMWEEIDE 193

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  122 bits (307), Expect = 2e-34
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 9/198 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK ALITG A  IG   A+ + + GA+V IADI  +   +   +I  ++ +      +
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACA------I 54

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT +  I+  V   V ++G +DI+ NNA + D A   I+D  +  ++R+ ++N+ G 
Sbjct: 55  SLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAP--IVDITRESYDRLFAINVSGT 112

Query: 131 FLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               +  AR M   GR G II+ AS  G  G      Y ++K  V+ L ++  + L R G
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172

Query: 190 IRVNCVSPYAVSSPMAKG 207
           I VN ++P  V      G
Sbjct: 173 INVNAIAPGVVDGEHWDG 190

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 4e-34
 Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 7/200 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSAN 65
           M   L+GKV +ITGG+  +G   A  F K  AKV+I    D+     V E+I  +   A 
Sbjct: 1   MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEA- 59

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N + TAV ++G LD+M NNAGI +    + +  +  ++ ++++ 
Sbjct: 60  --IAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLE--DWNKVINT 115

Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +       +G+II+ +SV   I       Y +SK GV  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAME 175

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 176 YAPKGIRVNNIGPGAINTPI 195

Length = 261

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 4e-34
 Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 5/187 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK AL+TG A  +G   A   ++ GA V   D        +   + ++   A     +
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRA---HAI 61

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+     ++   + A +  G LD + NNAGI +    +  + D   ++ +++VN+ G 
Sbjct: 62  AADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSK--SATELDIDTWDAVMNVNVRGT 119

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           FL  + A   ++ +GRG I++ AS   + G     AY +SK  V+G+ ++ A ELG  GI
Sbjct: 120 FLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Query: 191 RVNCVSP 197
            VN ++P
Sbjct: 180 TVNAIAP 186

Length = 250

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  121 bits (306), Expect = 6e-34
 Identities = 65/205 (31%), Positives = 98/205 (47%), Gaps = 13/205 (6%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVA ITG A   G   A   +  GA ++  D+   L +     +++          V
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 71  ----------HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                       DV    ++   V   V Q+G+LD++  NAG++   +   L  +Q  ++
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQ--WD 118

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
            +L +NL G +   K     M   G G SII T+SV G+        Y ++KHG+VGL K
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPM 204
             A EL  +GIRVN + PY+V +PM
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPM 203

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  121 bits (305), Expect = 6e-34
 Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 19/199 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+GKVALITG +  IGE  AR  ++ GAKV++A  +++  E++ ++I        G + 
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI------GAGAAL 56

Query: 70  VHC-DVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERIL 123
               DVT    +E A+     ++G++DI+ NNAG+     +DEA          +++R++
Sbjct: 57  ALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADL-------DDWDRMI 109

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
             N+ G   GT+     M     G II+  S+ G         Y ++K  V         
Sbjct: 110 DTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQ 169

Query: 184 ELGRFGIRVNCVSPYAVSS 202
           EL   GIRV  +SP  V +
Sbjct: 170 ELAGTGIRVTVISPGLVET 188

Length = 246

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  120 bits (302), Expect = 9e-34
 Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 4/186 (2%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
           VA++TGGA  IG+  A   +K GA V+IAD+K +  E+V   I  +   A G     C+V
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLE---CNV 57

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           T E+D+E  V   VSQ+G + I+ NNAG     KP  +   + +FE    +NL  AF  +
Sbjct: 58  TSEQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLS 116

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           +  A  M+ AG G+I++ +S+      V   AY SSK  V  + +N A +LG  GIRVN 
Sbjct: 117 QLCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNA 176

Query: 195 VSPYAV 200
           V+P AV
Sbjct: 177 VAPGAV 182

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 1e-33
 Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 8/198 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCS 68
            L G+VA +TG    IG+  A   ++ GA V + D++ D G     E I ++   A    
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRA---I 61

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            +  DVT + D+  AV    ++ G L +  N AGI + A P   + ++ +++ ++ +NL 
Sbjct: 62  QIAADVTSKADLRAAVARTEAELGALTLAVNAAGIAN-ANP-AEEMEEEQWQTVMDINLT 119

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVI--GGVTSHAYTSSKHGVVGLMKNTAVELG 186
           G FL  +  AR M   G GSI++ AS+ G+I   G+    Y +SK GV+ L K+ A+E  
Sbjct: 120 GVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV 179

Query: 187 RFGIRVNCVSPYAVSSPM 204
             GIRVN +SP   ++PM
Sbjct: 180 GRGIRVNSISPGYTATPM 197

Length = 254

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 1e-33
 Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GK AL+TGG+  +G   A    + GA+V+++  K +  E     + +    A    +
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDAL---W 65

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DV  E DIE      + ++G +DI+ NNAG    A     D+    +++++++N+ G
Sbjct: 66  IAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPA--EDHPVEAWDKVMNLNVRG 123

Query: 130 AFLGTKHAARV-MKPAGRGSIISTASVCGVIGG----VTSHAYTSSKHGVVGLMKNTAVE 184
            FL ++  A+  M P G G II+ ASV G+ G     + + AY +SK  V+   +  A E
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLK 210
            G  GIRVN ++P    + M +G L+
Sbjct: 184 WGPHGIRVNAIAPGFFPTKMTRGTLE 209

Length = 259

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  124 bits (314), Expect = 2e-33
 Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
           Q +V L+TG AG IG  A + F++ G +V++AD      E   E   S     +    + 
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNV---ERARERADSLGPDHHA---LA 57

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DV+ E  I         ++G++D++ NNAG+ D      LD    EF R+ ++NL GA+
Sbjct: 58  MDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAY 117

Query: 132 LGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           L  + A R+M   G G +I++ AS  G++      AY++SK  V+ L ++ A E    GI
Sbjct: 118 LVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGI 177

Query: 191 RVNCVSPYAVSSPM 204
           RVN V P  V + M
Sbjct: 178 RVNAVLPGYVRTQM 191

Length = 520

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 4e-33
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
            +L GK ALITG    IGE  AR+F++HGA +++ DI  ++ E + +++         C+
Sbjct: 2   GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHR---CT 57

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DV     +  A+  A  + G++DI+ NNAG+      + LD    + +  + +N+ 
Sbjct: 58  AVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLG--SFLDMSDEDRDFHIDINIK 115

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCG-VIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           G +  TK     M     G I+  +SV G ++      AY  +K  +VGL K+ AVE  +
Sbjct: 116 GVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQ 175

Query: 188 FGIRVNCVSPYAVSSPMAKG 207
            GIRVN + P  V +PMA+ 
Sbjct: 176 SGIRVNAICPGYVRTPMAES 195

Length = 263

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 4e-33
 Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R   KVA++TG AG IG+  A   ++ GA V++ADI  +  E V + I +   +A     
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTA---IA 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
           V  DV+     +   +  VS +G +D + NNA I    K ++L       +++ +SVNL 
Sbjct: 60  VQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLD 119

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GA + T+   + M   G G+I++ +S       + S+ Y  +K G+ GL +  A ELG  
Sbjct: 120 GALVCTRAVYKHMAKRGGGAIVNQSSTAAW---LYSNFYGLAKVGLNGLTQQLARELGGM 176

Query: 189 GIRVNCVSP 197
            IRVN ++P
Sbjct: 177 NIRVNAIAP 185

Length = 250

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  118 bits (299), Expect = 5e-33
 Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 21/196 (10%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVA ITGG   IG+  A+ F++ GA V IA  K ++ E+  E+ISS++        +
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGR--AHPI 58

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDNDQAEFERILSV 125
            CDV   + +E AV+  + ++GK+DI+ NNA        +   PN        F+ ++ +
Sbjct: 59  QCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPN-------GFKTVIDI 111

Query: 126 NLVGAFLGTKHAA-RVMKPAGRGSIIS---TASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +L G F  TK    R+++    GSI++   T +  G    V S A   +K GV  L ++ 
Sbjct: 112 DLNGTFNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAA---AKAGVDALTRSL 168

Query: 182 AVELGRFGIRVNCVSP 197
           AVE G +GIRVN ++P
Sbjct: 169 AVEWGPYGIRVNAIAP 184

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  117 bits (296), Expect = 1e-32
 Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 6/198 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG-CSY 69
           L  +  LITGG+G +G   A   +  GA V++ DI    G +  + +++   +A G    
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLV 128
           +  DV        A++  V ++G+LDI+ NNAGI  D A   +      E++ ++ VNL 
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSI---EEWDDVIDVNLD 120

Query: 129 GAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           G F  T+ A   M  A R G I++ ASV GV G      Y +SK G++GL K  A EL  
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAP 180

Query: 188 FGIRVNCVSPYAVSSPMA 205
            GI VN V+P A+++PMA
Sbjct: 181 RGITVNAVAPGAINTPMA 198

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  117 bits (296), Expect = 1e-32
 Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 10/196 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCEDISSSSSSANGCS 68
           L GKVAL+TG +  IG   A+  ++ GA V++  A  K    E V  +I ++   A    
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAA-AEEVVAEIEAAGGKA---I 56

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DV+    +    + A   +G +DI+ NNAG++ +    I +  + EF+R+ +VN  
Sbjct: 57  AVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKP--IAETSEEEFDRMFTVNTK 114

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   + AA+ ++  GR  II+ +S           AY  SK  V    +  A ELG  
Sbjct: 115 GAFFVLQEAAKRLRDGGR--IINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGR 172

Query: 189 GIRVNCVSPYAVSSPM 204
           GI VN V+P  V + M
Sbjct: 173 GITVNAVAPGPVDTDM 188

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  117 bits (296), Expect = 1e-32
 Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 3/193 (1%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS-SSANGCSYVH 71
           GK  LITGG+  IG+  A+   K GA V+I    +   E   E+I + + +S    SY+ 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            D++  +++E A   AV + G  D++ N AGI         D    EFER + VN  G+ 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS-IPGL-FEDLTAEEFERGMDVNYFGSL 118

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
                   +MK    G I+  +S   ++G     AY  SK  + GL ++   EL  + IR
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 192 VNCVSPYAVSSPM 204
           V+ V P    +P 
Sbjct: 179 VSVVYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 1e-32
 Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 19/194 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           LQGK+ ++TGG+  IG    +    +GA V+ ADI                       +V
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG------------GDGQHENYQFV 54

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI------VDEAKPN-ILDNDQAEFERIL 123
             DV+  +++ + V   + ++G++D + NNAGI      VDE  P    + ++A F+++ 
Sbjct: 55  PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMF 114

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           ++N  G FL ++  AR M     G I++ +S  G+ G      Y ++K  +    ++ A 
Sbjct: 115 NINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAK 174

Query: 184 ELGRFGIRVNCVSP 197
           ELG+  IRV  V+P
Sbjct: 175 ELGKHNIRVVGVAP 188

Length = 266

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  117 bits (295), Expect = 1e-32
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
            GKVALIT  A  IG   A  F++ GA V+  DI         E+         G +   
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDIN--------EEKLKELERGPGITTRV 52

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DVT ++     V     + G++D++FN AG V     +ILD +  +++  +++N+   +
Sbjct: 53  LDVTDKE----QVAALAKEEGRIDVLFNCAGFVHHG--SILDCEDDDWDFAMNLNVRSMY 106

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGRFGI 190
           L  K     M     GSII+ +SV   I GV +   Y+++K  V+GL K+ A +  + GI
Sbjct: 107 LMIKAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGI 166

Query: 191 RVNCVSPYAVSSPMAKGFLKLDDD 214
           R N + P  V +P  +  ++   D
Sbjct: 167 RCNAICPGTVDTPSLEERIQAQPD 190

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  117 bits (295), Expect = 2e-32
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 13/210 (6%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
           + K+ LITG AG IG+   +     GA++++ADI     E + E++++   +      + 
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIA--LE 58

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-VDEAKPNILDNDQAEFERILSVNLVGA 130
            D+T ++ I+  + + + ++G++DI+ NNA            +    ++  +L+VNL GA
Sbjct: 59  LDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGA 118

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGG----------VTSHAYTSSKHGVVGLMKN 180
           FL ++   ++ K  G+GSII+ AS+ GVI             +   Y+  K G++ L K 
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFLK 210
            A      GIRVN +SP  + +     FL+
Sbjct: 179 LAKYYADTGIRVNAISPGGILNNQPSEFLE 208

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 2e-32
 Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 6/188 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GKVA++TGG   +G+  A   +K GA ++I     +  E+    I          ++
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETR-RLIEKEGRKV---TF 67

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  D+TK +  E  V  A+ ++GK+DI+ NNAG +  A   +L+    ++  ++ +NL  
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP--LLEYKDEDWNAVMDINLNS 125

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            +  ++  A+VM   G G II+ AS+    GG    AYT+SKHGV GL K  A EL  + 
Sbjct: 126 VYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYN 185

Query: 190 IRVNCVSP 197
           I+VN ++P
Sbjct: 186 IQVNAIAP 193

Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  117 bits (295), Expect = 2e-32
 Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 17/196 (8%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
             L+ KVA++TGG+  IG+       + G+ V+  DIK+               S N   
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE--------------PSYNDVD 47

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           Y   DV+ ++ +   ++  +S+YG++DI+ NNAGI  E+   I   ++ E++RI++VN+ 
Sbjct: 48  YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI--ESYGAIHAVEEDEWDRIINVNVN 105

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G FL +K+    M    +G II+ ASV        + AY +SKH V+GL ++ AV+    
Sbjct: 106 GIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT 165

Query: 189 GIRVNCVSPYAVSSPM 204
            IR   V P ++ +P+
Sbjct: 166 -IRCVAVCPGSIRTPL 180

Length = 258

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  116 bits (293), Expect = 2e-32
 Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDISSSSSSAN 65
           M+  LQGK ALITG    IG   A   +K G  V L+A  +++L ++V E++ +      
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKV- 58

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
                  DV+  +++  A+    ++ G +DI+ NNAGI        L+ D AE+E+I+ V
Sbjct: 59  --VIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFG--KFLELDPAEWEKIIQV 114

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL+G +  T+     M     G II+ +S  G  G   + AY++SK GV+GL ++   E+
Sbjct: 115 NLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEV 174

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
            +  IRV  ++P  V++ MA   L L D
Sbjct: 175 RKHNIRVTALTPSTVATDMAVD-LGLTD 201

Length = 239

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 2e-32
 Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 6/199 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   L GK A++TG A  IG+  A   ++ GA V IAD+  D   +V ++I+ +   A G
Sbjct: 1   MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIG 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DVT E  +   ++    ++G +DI+ +NAGI  +    I +   A+++++ +++
Sbjct: 61  ---VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGI--QIVNPIENYSFADWKKMQAIH 115

Query: 127 LVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           + GAFL TK A + M    R G +I   SV          AY ++KHG++GL +  A E 
Sbjct: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEG 175

Query: 186 GRFGIRVNCVSPYAVSSPM 204
            +  +R + V P  V +P+
Sbjct: 176 AKHNVRSHVVCPGFVRTPL 194

Length = 262

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  117 bits (294), Expect = 3e-32
 Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 23/205 (11%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES---------VCEDISSS 60
           R  G+V L+TG  G +G   A  F++ GAKV++ D+  D   S         V ++I ++
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 61  SSSANGCSYVHCDVTKEKDIENA---VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
              A         V     +E+    V TA+  +G++DI+ NNAGI+ +   +     + 
Sbjct: 62  GGKA---------VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDR--SFAKMSEE 110

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           +++ ++ V+L G+F  T+ A   M+    G II+T+S  G+ G      Y+++K G++GL
Sbjct: 111 DWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGL 170

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSS 202
               A+E  ++ I  N ++P A S 
Sbjct: 171 SNTLAIEGAKYNITCNTIAPAAGSR 195

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  115 bits (291), Expect = 6e-32
 Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 6/196 (3%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDV 74
           A ITG AG +G   AR  ++ GAKV + DI D  G ++   +I+++       + V  DV
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQ-DV 60

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           T E   +  +  A    G L ++ NNAG+       I   +  E+ R++++N+   FLG 
Sbjct: 61  TDEAQWQALLAQAADAMGGLSVLVNNAGVGSFG--AIEQIELDEWRRVMAINVESIFLGC 118

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           KHA   ++ +   SI++ +SV          AY +SK  V  L K+ A++  R G+ V C
Sbjct: 119 KHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRC 178

Query: 195 --VSPYAVSSPMAKGF 208
             + P  + + +    
Sbjct: 179 NSIHPTFIRTGIVDPI 194

Length = 251

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  116 bits (291), Expect = 8e-32
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 10/202 (4%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV- 70
             +VA++ GG  ++GE      ++ G  V +ADI  +  E V ++I++      G     
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEY----GEKAYG 56

Query: 71  -HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D T E+ +          + ++D++  +AGI   AK  I D +  +F+R L VNLVG
Sbjct: 57  FGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAK--ITDFELGDFDRSLQVNLVG 114

Query: 130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            FL  +  +++M   G +G II   S  G +G   +  Y+++K G VGL ++ A++L   
Sbjct: 115 YFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEH 174

Query: 189 GIRVNCVSP-YAVSSPMAKGFL 209
           GI VN +     + SPM +  L
Sbjct: 175 GITVNSLMLGNLLKSPMFQSLL 196

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 1e-31
 Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 13/193 (6%)

Query: 11  LQGKVALITGGAGS-IGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCS 68
           L GKV L+T  AG+ IG   AR   + GA+V+I+DI +  LGE+  E      ++  G  
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADE-----LAAELGLG 69

Query: 69  YVH---CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
            V    CDVT E  ++  ++ AV + G+LD++ NNAG+  +    ++D    E+ R+L V
Sbjct: 70  RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQT--PVVDMTDDEWSRVLDV 127

Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            L G F  T+ A R M+  G  G I++ ASV G         Y ++K GV+ L + +A+E
Sbjct: 128 TLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALE 187

Query: 185 LGRFGIRVNCVSP 197
              +G+R+N V+P
Sbjct: 188 AAEYGVRINAVAP 200

Length = 262

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 3e-31
 Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 5/193 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GK+ALITG +  IG   A+ ++K GA ++  DI  +L +            A+G  YV
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHG--YV 65

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDVT E  ++  V+    + G +DI+ NNAGI+ +  P +L+    +F +++ ++L   
Sbjct: 66  -CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGII-KRIP-MLEMSAEDFRQVIDIDLNAP 122

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ +K     M   G G II+  S+   +G  T  AY ++K G+  L KN A E G   I
Sbjct: 123 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 182

Query: 191 RVNCVSPYAVSSP 203
           + N + P  +++P
Sbjct: 183 QCNGIGPGYIATP 195

Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  114 bits (287), Expect = 3e-31
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           KV LITG +  IG   A   +  G +V+  A   D L               +    +  
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLG-------ELLNDNLEVLEL 53

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DVT E+ I+ AV   + ++G++D++ NNAG      P + +    E   +  VN+ G   
Sbjct: 54  DVTDEESIKAAVKEVIERFGRIDVLVNNAGY-GLFGP-LEETSIEEVRELFEVNVFGPLR 111

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            T+    +M+  G G I++ +SV G++       Y +SK  +  L ++  +EL  FGI+V
Sbjct: 112 VTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKV 171

Query: 193 NCVSPYAVSSPMAK 206
             + P  V +  A 
Sbjct: 172 TIIEPGPVRTGFAD 185

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 4e-31
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 7/198 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   LQGKV  ITGG G +G   A   +  GA+V +              + + +    G
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
                 D+   +    AV+    Q+G+LD + N AG        I D D   ++R+  VN
Sbjct: 61  I-----DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGT--IADGDADTWDRMYGVN 113

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           +      +K A   +  +G G I++  +   +  G    AY ++K GV  L +  A EL 
Sbjct: 114 VKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL 173

Query: 187 RFGIRVNCVSPYAVSSPM 204
             GI VN V P  + +P 
Sbjct: 174 DRGITVNAVLPSIIDTPP 191

Length = 239

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  113 bits (285), Expect = 5e-31
 Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 16/208 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+ KV +ITGGA  +G   A   ++ GAK+ + D+  +  E    +  +  +   G  Y
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRG--Y 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE-----AKPNILDNDQ--AEFERI 122
              +VT E+D+E         +G+L+ + NNAGI+ +     AK   + +     +F+ +
Sbjct: 60  A-ANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSV 118

Query: 123 LSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVC--GVIGGVTSHAYTSSKHGVVGLMK 179
           + VNL G FL  + AA  M  +G  G II+ +S+   G +G      Y++SK GV  +  
Sbjct: 119 IDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN---YSASKAGVAAMTV 175

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKG 207
             A EL R+GIRV  ++P  + + M   
Sbjct: 176 TWAKELARYGIRVAAIAPGVIETEMTAA 203

Length = 253

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  117 bits (295), Expect = 1e-30
 Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 4/191 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L  +VA +TGGAG IG   AR  +  GA V++AD+  +  E+V  +I+    +    + +
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA-L 470

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT E+ ++ A       YG +DI+ NNAGI         +    E++  L +   G 
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA--TSSPFEETTLQEWQLNLDILATGY 528

Query: 131 FLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           FL  + A R M+  G  G+I+  AS   V  G  + AY+++K     L +  A E G +G
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588

Query: 190 IRVNCVSPYAV 200
           IRVN V+P AV
Sbjct: 589 IRVNTVNPDAV 599

Length = 676

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  112 bits (281), Expect = 2e-30
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 3/194 (1%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GKVA+ITG +  IG   A LF++ GA++ +     +  E   +    +  S      V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+T+E+  +  ++T ++++G+LDI+ NNAGI+  AK    D D  E+++++++NL   
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL--AKGGGEDQDIEEYDKVMNLNLRAV 118

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
              TK A   +    +G I++ +SV G         Y  SK  +    + TA+EL   G+
Sbjct: 119 IYLTKLAVPHLI-KTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGV 177

Query: 191 RVNCVSPYAVSSPM 204
           RVN VSP  + +  
Sbjct: 178 RVNSVSPGVIVTGF 191

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  111 bits (281), Expect = 2e-30
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 10/209 (4%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   L+ KV ++TGGA  IG   +   ++ GA  +I   +    +   E++ +    A  
Sbjct: 1   MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRA-- 57

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             +V  D+T +    +AV   V+++G++D + NNAG+ D      L+  +  F   L  N
Sbjct: 58  -EFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG---LEAGREAFVASLERN 113

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-GVTSHAYTSSKHGVVGLMKNTAVEL 185
           L+  ++   +    +K A RG+I++ +S   + G G TS  Y ++K   + L +  AV L
Sbjct: 114 LIHYYVMAHYCLPHLK-ASRGAIVNISSKTALTGQGGTS-GYAAAKGAQLALTREWAVAL 171

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            + G+RVN V P  V +P+ + ++   DD
Sbjct: 172 AKDGVRVNAVIPAEVMTPLYENWIATFDD 200

Length = 258

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  111 bits (281), Expect = 3e-30
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 15/190 (7%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKV +ITG +  IG   A   ++ GA++++A   +    S+ ++++     A     V  
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALV---VPT 57

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSVNL 127
           DV+  +  E  +  AV+++G +DI+ NNAGI      DE        D + FER++ VN 
Sbjct: 58  DVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT------DLSVFERVMRVNY 111

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           +GA   T  A   +K A RG I+  +S+ G+ G  T   Y +SKH + G   +  +EL  
Sbjct: 112 LGAVYCTHAALPHLK-ASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELAD 170

Query: 188 FGIRVNCVSP 197
            G+ V  V P
Sbjct: 171 DGVAVTVVCP 180

Length = 263

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 4e-30
 Identities = 71/209 (33%), Positives = 93/209 (44%), Gaps = 33/209 (15%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD--------IKDDLGESVCEDISSSS 61
            L G+VALITGG   IG      F   GA+V + +        ++   G+ V        
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVL------- 55

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD------EAKPNILDND 115
                   V  DVT   D + AV+  V  +GKLD    NAGI D      +     LD  
Sbjct: 56  -------VVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLD-- 106

Query: 116 QAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVV 175
              F+ I +VN+ G  LG K A   +K A  GS+I T S      G     YT+SKH VV
Sbjct: 107 -TAFDEIFNVNVKGYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVV 164

Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           GL++  A EL    IRVN V+P    + +
Sbjct: 165 GLVRQLAYELAP-KIRVNGVAPGGTVTDL 192

Length = 263

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  111 bits (279), Expect = 6e-30
 Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 8/199 (4%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD--DLGESVCEDISSSSSSAN 65
           S +L+GK ALITGG   IG   A  F++ GA V I  + +  D  E   + I        
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK-- 78

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
            C  +  D+  E    + V   V ++GKLDI+ NNA      + +I D    + E+    
Sbjct: 79  -CLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAA-YQHPQESIEDITTEQLEKTFRT 136

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+   F  TK A   +K     SII+T SV    G      Y ++K  +V   +  +++L
Sbjct: 137 NIFSMFYLTKAALPHLKKG--SSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQL 194

Query: 186 GRFGIRVNCVSPYAVSSPM 204
              GIRVN V+P  + +P+
Sbjct: 195 AEKGIRVNAVAPGPIWTPL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 8e-30
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 15/201 (7%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           +M+    GK  L+TG +  IG   A   ++ GA+V+ A       + +  +         
Sbjct: 2   NMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------- 53

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
           GC  +  DV  +     A+  A++  G  D + N AGI        LD     F+R+++V
Sbjct: 54  GCEPLRLDVGDDA----AIRAALAAAGAFDGLVNCAGIASLESA--LDMTAEGFDRVMAV 107

Query: 126 NLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           N  GA L  +H AR M  AGR GSI++ +S   ++G     AY +SK  +  + +   VE
Sbjct: 108 NARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVE 167

Query: 185 LGRFGIRVNCVSPYAVSSPMA 205
           LG  GIRVN V+P    +PMA
Sbjct: 168 LGPHGIRVNSVNPTVTLTPMA 188

Length = 245

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  110 bits (276), Expect = 1e-29
 Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 13/206 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANGCS 68
           RL G+ ALITG +  IG   AR F   GA VLI A   D L ++   D  +         
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQA--RDELAEEFPEREVH 63

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNI----LDNDQAEFERILS 124
            +  DV+ ++D    ++     +  L I+ NNAG       NI    +D  + E+  I  
Sbjct: 64  GLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGG------NIRKAAIDYTEDEWRGIFE 117

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            NL  AF  +++A  ++K     +I++  SV G+    +   Y  +K  ++ + +N AVE
Sbjct: 118 TNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVE 177

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLK 210
               GIRVN V+P+ + +P+  G L 
Sbjct: 178 WAEDGIRVNAVAPWYIRTPLTSGPLS 203

Length = 257

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 2e-29
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 10/191 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           + AL+TG AG IG+  AR F   G +VL  DI      +  + +  +         V CD
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVP-----VACD 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           +T    +  A+  A ++ G +D++  NAG       ++ D   A +    ++NL  A+L 
Sbjct: 58  LTDAASLAAALANAAAERGPVDVLVANAGAA--RAASLHDTTPASWRADNALNLEAAYLC 115

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGRFGIRV 192
            +     M    RG++++  SV G+      H AY+++K G++   K  AVE GRFGIR 
Sbjct: 116 VEAVLEGMLKRSRGAVVNIGSVNGM--AALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRA 173

Query: 193 NCVSPYAVSSP 203
           N V+P  V + 
Sbjct: 174 NAVAPGTVKTQ 184

Length = 257

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 3e-29
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 23/203 (11%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVALITGG+  IG   A      G KV I        E    ++++  +       +
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLG----L 59

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSV 125
             DV  E D++ AV+  V+ +G LD++  NAG+     V+E  P        E+  ++  
Sbjct: 60  AADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPE-------EWRLVIDT 112

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGV---IGGVTSHAYTSSKHGVVGLMKNTA 182
           NL GAF   K A   +K  G G II+ +S+ G     GG    AY +SK G+VG  +   
Sbjct: 113 NLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFAGGA---AYNASKFGLVGFSEAAM 168

Query: 183 VELGRFGIRVNCVSPYAVSSPMA 205
           ++L ++GI+V+ + P +V++   
Sbjct: 169 LDLRQYGIKVSTIMPGSVATHFN 191

Length = 237

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 4e-29
 Identities = 66/206 (32%), Positives = 108/206 (52%), Gaps = 24/206 (11%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK---------DDLGESVCEDISSS- 60
           L G+V ++TG  G IG   A  F+  GA+V++ DI              ++V ++I ++ 
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 61  -SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
             + ANG      D+       N V+ AV  +G LD++ NNAGI+ +    I +  + E+
Sbjct: 64  GEAVANGD-----DIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRM--IANMSEEEW 116

Query: 120 ERILSVNLVGAFLGTKHAARVMK---PAGR---GSIISTASVCGVIGGVTSHAYTSSKHG 173
           + +++V+L G F   +HAA   +    AGR     II+T+S  G+ G V    Y+++K G
Sbjct: 117 DAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAG 176

Query: 174 VVGLMKNTAVELGRFGIRVNCVSPYA 199
           +  L    A ELGR+G+ VN ++P A
Sbjct: 177 IAALTLVAAAELGRYGVTVNAIAPAA 202

Length = 286

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 4e-29
 Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 5/187 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G+VAL+TG A  +G   AR  +  GA VL+         ++   +++  ++      +
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRN---AATLEAAVAALRAAGGAAEAL 65

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+  E+ +  A     +++G+LDI+ NN G  D  +  + + D A    +L  +LV  
Sbjct: 66  AFDIADEEAVAAAFARIDAEHGRLDILVNNVGARD--RRPLAELDDAAIRALLETDLVAP 123

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            L ++ AA+ MK  G G II+  S+ G +       Y ++K G+ GLM+  A E G  GI
Sbjct: 124 ILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGI 183

Query: 191 RVNCVSP 197
             N ++P
Sbjct: 184 TSNAIAP 190

Length = 256

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  108 bits (270), Expect = 6e-29
 Identities = 62/194 (31%), Positives = 92/194 (47%), Gaps = 5/194 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+ K A++TGG G IG    R F++ GAKV + D+  +  E V  DI +   +A      
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQA---F 57

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CD+T    ++ AV  A    G +D++ NNAG  D+  P     +   +ER++++NL GA
Sbjct: 58  ACDITDRDSVDTAVAAAEQALGPVDVLVNNAGW-DKFGP-FTKTEPPLWERLIAINLTGA 115

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
                     M   G G I++ AS    +G      Y + K G+V   K  A E  R GI
Sbjct: 116 LHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 191 RVNCVSPYAVSSPM 204
            VN V P    + +
Sbjct: 176 TVNVVCPGPTDTAL 189

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 6e-29
 Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 13/201 (6%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA--DIKDDLGESVCEDISSSSSSAN 65
           S +L+GKVALITGG   IG   A LF+K GA + I   D  +D  E+             
Sbjct: 41  SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANET------KQRVEKE 94

Query: 66  G--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           G  C  +  DV+ E   ++AV   V + G+LDI+ NNA      + ++ D    + ++  
Sbjct: 95  GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAF-QYPQQSLEDITAEQLDKTF 153

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
             N+   F  TK A   +K     +II+T S+ G  G  T   Y+++K  +    ++ A 
Sbjct: 154 KTNIYSYFHMTKAALPHLKQGS--AIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQ 211

Query: 184 ELGRFGIRVNCVSPYAVSSPM 204
            L + GIRVN V+P  + +P+
Sbjct: 212 SLVQKGIRVNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  108 bits (271), Expect = 7e-29
 Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 7/193 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHC 72
           +VA++T     IG+  A L ++ G  + I    D+ G +   E++ S    A        
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRA---EIRQL 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D++   +   A++  + + G++D++ NNAG + +A    LD D  E+ +I +V++ GAFL
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAP--FLDMDFDEWRKIFTVDVDGAFL 117

Query: 133 GTKHAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
            ++ AAR M   G+G  II+  SV        + AYT++KH + GL K  A+EL   GI 
Sbjct: 118 CSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGIL 177

Query: 192 VNCVSPYAVSSPM 204
           VN V+P A+++PM
Sbjct: 178 VNAVAPGAIATPM 190

Length = 256

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  105 bits (264), Expect = 1e-28
 Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 18/178 (10%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLI----ADIKDDLGESVCEDISSSSSSANGCS- 68
              LITGG G +G   AR  +  GA+ L+            E V E        A G   
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAEL------EALGAEV 54

Query: 69  -YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
               CDV     +   +    +  G LD + +NAG++D+    + +     FER+L+  +
Sbjct: 55  TVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDG--PLEELTPERFERVLAPKV 112

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
            GA+    +   + +    G+ +  +SV GV+G      Y ++   +  L ++   E 
Sbjct: 113 TGAW----NLHELTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  111 bits (278), Expect = 2e-28
 Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            +V  ITGGA  IG   A  F+  G ++LI D   +  + + E +     S      V  
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLS------VQA 322

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+T E  +E+A     +++G+LD++ NNAGI +  KP+ L+    +F R+  VNL GAF 
Sbjct: 323 DITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPS-LEQSAEDFTRVYDVNLSGAFA 381

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
             + AAR+M  +  G I++  S+  ++     +AY +SK  V  L ++ A E    GIRV
Sbjct: 382 CARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRV 439

Query: 193 NCVSPYAVSSPMA 205
           N V+P  + +P  
Sbjct: 440 NTVAPGYIETPAV 452

Length = 520

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 4e-28
 Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 5/181 (2%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           +ITG A  +G   A  +++ G ++ +AD+ ++ GE   + +  +        Y  CDV  
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG---FYQRCDVRD 60

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
              +         ++G +D++ NNAG+         +    +++  +++NL+G   G K 
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGF--FEELSLEDWDWQIAINLMGVVKGCKA 118

Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
              + K    G I++ AS+ G++ G    +Y  +K GVV L +   VEL    I V+ V 
Sbjct: 119 FLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVC 178

Query: 197 P 197
           P
Sbjct: 179 P 179

Length = 270

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  106 bits (267), Expect = 5e-28
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 16/200 (8%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVA+ITGG G +G   A+  ++ GAKV I D   +  E+V  +I ++   A     V
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALA---V 64

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-------------IVDEAKPNILDNDQA 117
             DV  ++ +E A    +  +G  DI+ N AG              + E      D D+ 
Sbjct: 65  KADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEE 124

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
            FE +  +NL+G  L T+  A+ M     G+II+ +S+          AY+++K  +   
Sbjct: 125 GFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNF 184

Query: 178 MKNTAVELGRFGIRVNCVSP 197
            +  AV   + GIRVN ++P
Sbjct: 185 TQWLAVHFAKVGIRVNAIAP 204

Length = 278

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  105 bits (264), Expect = 7e-28
 Identities = 72/211 (34%), Positives = 94/211 (44%), Gaps = 18/211 (8%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+G+VALITGG   +G      F   GAKV + D   +    +  D        +    
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADF------GDAVVG 54

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD------EAKPNILDNDQAEFERIL 123
           V  DV    D E AV   V ++GKLD    NAGI D      +     LD     F+ + 
Sbjct: 55  VEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLD---EAFDELF 111

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
            +N+ G  LG K A   +  A  GS+I T S  G   G     YT+SKH VVGL+K  A 
Sbjct: 112 HINVKGYILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAY 170

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           EL    IRVN V+P  + + +  G   L   
Sbjct: 171 ELAPH-IRVNGVAPGGMVTDLR-GPASLGQG 199

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  104 bits (262), Expect = 8e-28
 Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 10/185 (5%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKVA++TGG   IG+     F + G KV+ ADI ++ G    E    +        +VH 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNL------FFVHG 54

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DV  E  ++  V   + + G++D++ NNA     +K  +      E++RILSVNL G + 
Sbjct: 55  DVADETLVKFVVYAMLEKLGRIDVLVNNAARG--SKGILSSLLLEEWDRILSVNLTGPYE 112

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            +++    +    +G II+ AS         S AY +SK G+V L    A+ LG   IRV
Sbjct: 113 LSRYCRDELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRV 170

Query: 193 NCVSP 197
           NC+SP
Sbjct: 171 NCISP 175

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  104 bits (262), Expect = 9e-28
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 5/195 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           LQGKVAL+TG +  IGE  AR  +  GA V IA  + D  E++ +++ +    A     +
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKAL---VL 57

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT E+ ++ AV   V   G+LDI+ NNAGI+      + D D  ++ R++  NL+G 
Sbjct: 58  ELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGL 115

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
              T  A        +G+I++ +SV G +    S  Y ++K GV    +    E+   G+
Sbjct: 116 MYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGV 175

Query: 191 RVNCVSPYAVSSPMA 205
           RV  + P  V + + 
Sbjct: 176 RVVVIEPGTVDTELR 190

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 2e-27
 Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 8/190 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK ALITG +  IG+  A  + + GA+V IA    D  E + ++I +S         V
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS---GGKVVPV 63

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV++ + + + ++   ++ G +DI   NAGI+      +LD    EF+R+ + N+ G 
Sbjct: 64  CCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP--MLDMPLEEFQRLQNTNVTGV 121

Query: 131 FLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHA--YTSSKHGVVGLMKNTAVELGR 187
           FL  + AA+ M   G+ G II+TAS+ G I  V      Y +SK  V+ L K  AVEL  
Sbjct: 122 FLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAP 181

Query: 188 FGIRVNCVSP 197
             IRVN VSP
Sbjct: 182 HKIRVNSVSP 191

Length = 253

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  104 bits (260), Expect = 2e-27
 Identities = 68/196 (34%), Positives = 92/196 (46%), Gaps = 7/196 (3%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
             +VAL+TG    IG   AR   K G +V +        E +   +     +        
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARG---EEGLATTVKELREAGVEADGRT 58

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
           CDV    +IE  V  AV++YG +D++ NNAG         L ++   +  ++  NL G F
Sbjct: 59  CDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADEL--WLDVVETNLTGVF 116

Query: 132 LGTKH--AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
             TK    A  M   G G II+ AS  G  G V +  Y++SKHGVVG  K   +EL R G
Sbjct: 117 RVTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 176

Query: 190 IRVNCVSPYAVSSPMA 205
           I VN V P  V +PMA
Sbjct: 177 ITVNAVCPGFVETPMA 192

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  103 bits (259), Expect = 4e-27
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 6/205 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSY 69
           LQGKV +ITG +  IGE  A   ++ GA+ VL A  ++ L E   E +   + S      
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSP---HV 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  D++  +D E  V  A+  +G LDI+ NNAGI    +    D       +I+ VN  G
Sbjct: 58  VPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRKIMEVNYFG 115

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               TK A   +    +GSI+  +S+ G IG     AY +SKH + G   +   EL    
Sbjct: 116 PVALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPN 175

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           I V  V P  + + +A   L  D  
Sbjct: 176 ISVTVVCPGLIDTNIAMNALSGDGS 200

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  101 bits (254), Expect = 2e-26
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 17/205 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
            S R +GKVALITGG   IG   A  F + GAKV +     +       +         G
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--------G 52

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              + CDV     ++ +      ++G++D++ NNAGI+        + D+ ++ +++ +N
Sbjct: 53  VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFE--EFDEEKYNKMIKIN 110

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG----GVTSHAYTSSKHGVVGLMKNTA 182
           L GA   T     ++K +  G+I++ AS  G IG    G T +A T  K G++ L +  A
Sbjct: 111 LNGAIYTTYEFLPLLKLSKNGAIVNIASNAG-IGTAAEGTTFYAIT--KAGIIILTRRLA 167

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKG 207
            ELG++GIRVN V+P  V + M   
Sbjct: 168 FELGKYGIRVNAVAPGWVETDMTLS 192

Length = 255

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  100 bits (251), Expect = 6e-26
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 16/201 (7%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            KVAL+TG    IG   A+   + G KV I D  ++  ++  + +S     A     V  
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIA---VKA 58

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSVNL 127
           DV+    +  AV   V  +G L+++ NNAG+     ++             F+++ ++N+
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQ-------FDKVYNINV 111

Query: 128 VGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            G   G + A    K  G G  II+  S  GV+G      Y+S+K  V GL +  A +L 
Sbjct: 112 GGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLA 171

Query: 187 RFGIRVNCVSPYAVSSPMAKG 207
             GI VN  +P  V +PM   
Sbjct: 172 SEGITVNAYAPGIVKTPMMFD 192

Length = 256

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 6e-26
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 7/190 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCS 68
           RL GKVAL+TGG   +G   AR F++ GA  ++I     + GE+   ++ +  +      
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGA---KAV 59

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           +V  D++  +D    V  A   +G+LD + N AG+ D     ILD     F+R  +VN+ 
Sbjct: 60  FVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRG--TILDTSPELFDRHFAVNVR 117

Query: 129 GAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
             F   + A ++M+     G+I++  S+    G     AY +SK  +  L +N A  L R
Sbjct: 118 APFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLR 177

Query: 188 FGIRVNCVSP 197
             IRVN ++ 
Sbjct: 178 NRIRVNGLNI 187

Length = 260

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  100 bits (250), Expect = 9e-26
 Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 6/197 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDISSSSSSANGCSY 69
           ++GK ALITG +  IG   A+  ++ G  + L+A  +D L E++ +++   +        
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKL-EALAKELEDKTG--VEVEV 60

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  D++  + +E   +    + G +D++ NNAG         L+    E E ++ +N++ 
Sbjct: 61  IPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGP--FLELSLDEEEEMIQLNILA 118

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               TK     M   G G II+  S  G+I       Y+++K  V+   +    EL   G
Sbjct: 119 LTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTG 178

Query: 190 IRVNCVSPYAVSSPMAK 206
           ++V  V P    +    
Sbjct: 179 VKVTAVCPGPTRTEFFD 195

Length = 265

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 99.0 bits (247), Expect = 1e-25
 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 15  VALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           V +ITG +  IG   A  F++ GAK VL A   + L E    ++      A     V  D
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELA-REVRELGGEA---IAVVAD 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V     +E A +TAV ++G++D   NNAG+    +    D    EF R+  VN +G   G
Sbjct: 58  VADAAQVERAADTAVERFGRIDTWVNNAGVAVFGR--FEDVTPEEFRRVFDVNYLGHVYG 115

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG--IR 191
           T  A   ++  G G++I+  S+ G        AY++SKH V G  ++   EL   G  I 
Sbjct: 116 TLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPIS 175

Query: 192 VNCVSPYAVSSP 203
           V  V P A+++P
Sbjct: 176 VTLVQPTAMNTP 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 99.2 bits (247), Expect = 2e-25
 Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 4/187 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L  KVAL+T     IG   AR  ++ GA V+++  K    +     +     S  G    
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV-- 65

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            C V K +D E  V TAV+ +G +DI+ +NA  V+    NILD+ +  +++IL VN+   
Sbjct: 66  -CHVGKAEDRERLVATAVNLHGGVDILVSNAA-VNPFFGNILDSTEEVWDKILDVNVKAT 123

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            L TK     M+  G GS++  +SV           Y  SK  ++GL KN A EL    I
Sbjct: 124 ALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNI 183

Query: 191 RVNCVSP 197
           RVNC++P
Sbjct: 184 RVNCLAP 190

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 98.9 bits (246), Expect = 2e-25
 Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 6/196 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCS 68
           +L GKVA++TGGA  IG+      ++ GAKV+I  +   +  E++  ++           
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYA-- 60

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DV+K +D    V  AV+ +GK+DI+ NNAGI  +     L+ +  ++ER++ VNL 
Sbjct: 61  -VQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNRE--DWERVIDVNLS 117

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             F  T      +  A  G IIS +S+ G  GG     Y+++K G++G  K+ A+EL + 
Sbjct: 118 SVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKT 177

Query: 189 GIRVNCVSPYAVSSPM 204
            + VN + P  + + M
Sbjct: 178 NVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 99.1 bits (247), Expect = 2e-25
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 5/196 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK  LITG A  IG   A   +++GA+++I DI  +  E     +      A+   + 
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPF- 65

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             +VT ++++E A+       G +D++ NNAGI  + +    +  + E+  +++VN    
Sbjct: 66  --NVTHKQEVEAAIEHIEKDIGPIDVLINNAGI--QRRHPFTEFPEQEWNDVIAVNQTAV 121

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           FL ++  AR M     G II+  S+   +G  T   Y +SK  V  L +   VEL R  I
Sbjct: 122 FLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181

Query: 191 RVNCVSPYAVSSPMAK 206
           +VN ++P    + M K
Sbjct: 182 QVNGIAPGYFKTEMTK 197

Length = 254

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 19/205 (9%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDISSSSSSAN 65
           M   +  +V +ITG +  +G   AR F++ GAKV L+A  ++ L E++  +I ++   A 
Sbjct: 2   MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL-EALAAEIRAAGGEA- 59

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFE 120
               V  DV   + ++ A + A  + G +D   NNA +      ++  P        EF 
Sbjct: 60  --LAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTP-------EEFR 110

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R+  V  +G   GT  A R M+P  RG+II   S           AY ++KH + G   +
Sbjct: 111 RVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDS 170

Query: 181 TAVEL--GRFGIRVNCVSPYAVSSP 203
              EL      + V  V P AV++P
Sbjct: 171 LRCELLHDGSPVSVTMVQPPAVNTP 195

Length = 334

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 98.2 bits (245), Expect = 2e-25
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 9/194 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           KVAL+TG +  IG   AR  ++ G +V        LG    ED+++ S+S      V  D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVS-------LGLRNPEDLAALSASGGDVEAVPYD 53

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
               +D    V+    ++G++D++ +NAGI       + +   AE E   S+N++     
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTT--LREGSDAELEAHFSINVIAPAEL 111

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
           T+     ++ AG G ++   S+ G      +  Y++SK  +  L      E    G+RV+
Sbjct: 112 TRALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVS 171

Query: 194 CVSPYAVSSPMAKG 207
            V P  V +PMA+G
Sbjct: 172 AVCPGFVDTPMAQG 185

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 98.2 bits (245), Expect = 3e-25
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDV 74
           AL+TGG+  IG+  A   ++ GA V+I   K  D    V  +I      A     V  DV
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKA---VVVRADV 57

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           ++ +D+E        ++G+LD++ +NA     A   + +   A ++  ++ NL       
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAA--GAFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           + AA++M+  G G I++ +S+  +       A  ++K  +  L++  AVELG  GIRVN 
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 195 VSPYAVSSPMAKGF 208
           VSP  + +     F
Sbjct: 176 VSPGVIDTDALAHF 189

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 97.9 bits (244), Expect = 4e-25
 Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 8/197 (4%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGC 67
             L  KVA++TG +  IG   AR  +  G  V +         + +  +I ++   A   
Sbjct: 1   MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIA- 59

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
             V  DV     +    + A + +G++D++ NNAG++      I D D  +F+R ++ NL
Sbjct: 60  --VQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGT--IADFDLEDFDRTIATNL 115

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            GAF+  + AAR +   GR   +ST+ +   + G     Y +SK  V GL+   A EL  
Sbjct: 116 RGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYG--PYAASKAAVEGLVHVLANELRG 173

Query: 188 FGIRVNCVSPYAVSSPM 204
            GI VN V+P  V++ +
Sbjct: 174 RGITVNAVAPGPVATEL 190

Length = 245

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 97.9 bits (244), Expect = 4e-25
 Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 10/207 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+GK AL+TGG   IG       +  GA+V     ++   + + E ++           
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCA-RN--QKELDECLTEWREKGFKVEG 59

Query: 70  VHCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIV--DEAKPNILDNDQAEFERILSVN 126
             CDV+   + +  ++T  S + GKL+I+ NNAG     EAK    D  + ++  I+S N
Sbjct: 60  SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAK----DYTEEDYSLIMSTN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
              A+  ++ A  ++K +G G+I+  +SV GVI   +   Y ++K  +  L ++ A E  
Sbjct: 116 FEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWA 175

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           +  IRVN V+P+ +++P+ +  ++  +
Sbjct: 176 KDNIRVNAVAPWVIATPLVEPVIQQKE 202

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 98.3 bits (245), Expect = 5e-25
 Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 15/199 (7%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+ KVA+ITGG G +G   AR  ++ GAKV       + G+ V ++I++    A     +
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIA---L 59

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG------------IVDEAKPNILDNDQAE 118
             DV     +E A    V+Q+G +DI+ N AG               E + N  D D+  
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 119 FERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLM 178
           +E +  +NL G+FL ++   + M     GSII+ +S+          AY+++K  V    
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 179 KNTAVELGRFGIRVNCVSP 197
           +  AVE    G+RVN ++P
Sbjct: 180 QWLAVEFATTGVRVNAIAP 198

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 97.1 bits (242), Expect = 1e-24
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 11/196 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA---------DIKDDLGESVCEDISSSS 61
           L GKVA +TG +  IG   A   +K GA V++A              L  ++ E      
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
           ++      +  DV  E  +   V   V Q+G+LDI+ NNAG +  +   + D     F+ 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS--LVEDTPAKRFDL 118

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +  VNL G +L ++ A   M  AG+G I++ +    +       AY + K G+  L    
Sbjct: 119 MQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGL 178

Query: 182 AVELGRFGIRVNCVSP 197
           A EL R GI VN + P
Sbjct: 179 AAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 97.1 bits (242), Expect = 1e-24
 Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVAL+TG    +G+  A   ++ GA ++ A           E      +       +
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS-----EPSETQQQVEALGRRFLSL 57

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D++  + I+  V++AV ++G +DI+ NNAGI+  A     +  + +++ +++VNL   
Sbjct: 58  TADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRAD--AEEFSEKDWDDVMNVNLKSV 115

Query: 131 FLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           F  T+ AA+   K    G II+ AS+    GG+   +YT+SKH V GL K  A E    G
Sbjct: 116 FFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKG 175

Query: 190 IRVNCVSP 197
           I VN ++P
Sbjct: 176 INVNAIAP 183

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 97.0 bits (242), Expect = 1e-24
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 24/204 (11%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GK  LITG  G IG    +   + G  V+ ADI  +    + E +     S      V
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLS-LV 60

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP-------NILDNDQAEFERIL 123
             D+T ++ +E  ++ +  +YGK+D      G V+ A P          D    +F   L
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKID------GAVNCAYPRNKDYGKKFFDVSLDDFNENL 114

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH----------AYTSSKHG 173
           S++L  +FL ++  A+  K  G G++++ +S+ GV+                 Y + K G
Sbjct: 115 SLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAG 174

Query: 174 VVGLMKNTAVELGRFGIRVNCVSP 197
           ++ L K  A       IRVNCVSP
Sbjct: 175 IIHLTKYLAKYFKDSNIRVNCVSP 198

Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 2e-24
 Identities = 74/217 (34%), Positives = 103/217 (47%), Gaps = 30/217 (13%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI--------ADIKDDLGESVCEDIS 58
           MS RLQGK ALITGG   IG   AR F   GA+V I           + +LGES    I 
Sbjct: 1   MS-RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALV-IR 58

Query: 59  SSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE 118
           + +           DV  +K +  A+      +G+LD +F NAG+   A   + D D+A 
Sbjct: 59  ADAG----------DVAAQKALAQALA---EAFGRLDAVFINAGVAKFAP--LEDWDEAM 103

Query: 119 FERILSVNLVGAFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           F+R  + N+ G +   +    ++  PA   SI+   S+   IG   S  Y +SK  ++ L
Sbjct: 104 FDRSFNTNVKGPYFLIQALLPLLANPA---SIVLNGSINAHIGMPNSSVYAASKAALLSL 160

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            K  + EL   GIRVN VSP  V +P   G L L + 
Sbjct: 161 AKTLSGELLPRGIRVNAVSPGPVQTP-LYGKLGLPEA 196

Length = 249

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 95.3 bits (237), Expect = 5e-24
 Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 8/190 (4%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           +P   G+VAL+TG A  IG   A      G +V++AD+  + G  V + +  ++      
Sbjct: 5   NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAW----- 59

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            ++  DV  E  +   V   + Q+G+LD +  NA I D     +     A + R+L+VNL
Sbjct: 60  -FIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNL 118

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            G  L  KH A  ++ A  G+I++ AS         + AY +SK G++ L    A+ LG 
Sbjct: 119 TGPMLLAKHCAPYLR-AHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP 177

Query: 188 FGIRVNCVSP 197
             IRVN VSP
Sbjct: 178 -EIRVNAVSP 186

Length = 255

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 94.9 bits (236), Expect = 8e-24
 Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 16/205 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R +G+VAL+TG +  IG   AR   +HG KV+    + D      E +++   SA   + 
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDK----IEALAAECQSAGYPTL 58

Query: 70  V--HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVN 126
               CD++ E+ I +  +   +Q+  +D+  NNAG+   A+P  +L      ++ +  VN
Sbjct: 59  FPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGL---ARPEPLLSGKTEGWKEMFDVN 115

Query: 127 LVGAFLGTKHAARVMKPAG--RGSIISTASVCG--VIGGVTSHAYTSSKHGVVGLMKNTA 182
           ++   + T+ A + MK      G II+  S+ G  V      H Y ++KH V  L +   
Sbjct: 116 VLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLR 175

Query: 183 VEL--GRFGIRVNCVSPYAVSSPMA 205
            EL   +  IR   +SP  V +  A
Sbjct: 176 QELREAKTHIRATSISPGLVETEFA 200

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 94.1 bits (234), Expect = 8e-24
 Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 8/192 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K AL+TG +  IGE  ARL    G +V I          +    +       G   +  D
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARD---EARLAAAAAQELEGVLG---LAGD 54

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V  E D+  AV+     +G LD + NNAG+       + +    E+  +L  NL GAF  
Sbjct: 55  VRDEADVRRAVDAMEEAFGGLDALVNNAGV--GVMKPVEELTPEEWRLVLDTNLTGAFYC 112

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
              AA  +   G G+I++  S+ G        AY +SK G++GL +   ++L    IRV 
Sbjct: 113 IHKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVV 172

Query: 194 CVSPYAVSSPMA 205
            V P +V +  A
Sbjct: 173 NVMPGSVDTGFA 184

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 93.9 bits (234), Expect = 2e-23
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 5/199 (2%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
            L+TG A  IG   AR  ++ GA+V   D   +    +  D+               DV 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFAT---YKLDVA 57

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
               ++  V     +YG +D++ N AGI+      I      +++   +VN  G F  ++
Sbjct: 58  DSAAVDEVVQRLEREYGPIDVLVNVAGILRLGA--IDSLSDEDWQATFAVNTFGVFNVSQ 115

Query: 136 HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
             +  MK    G+I++  S    +  +   AY +SK  +  L K   +EL  +GIR N V
Sbjct: 116 AVSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVV 175

Query: 196 SPYAVSSPMAKGFLKLDDD 214
           SP +  + M +     +  
Sbjct: 176 SPGSTDTEMQRQLWNDEYG 194

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 93.5 bits (233), Expect = 3e-23
 Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 11/201 (5%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKVAL+T  +  IG   AR  ++ GA+V I     +  E    ++ +  +       V  
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVL---AVVA 57

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+T  +DI+  V  A   +G++DI+ NNAG          +    ++     + L+    
Sbjct: 58  DLTDPEDIDRLVEKAGDAFGRVDILVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVIR 115

Query: 133 GTKHAARVMKPAGRGSIISTASVCGV---IGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
             +     MK  G G I++ +S+         V S+    ++ G++GL+K  + EL   G
Sbjct: 116 IVRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNV---ARAGLIGLVKTLSRELAPDG 172

Query: 190 IRVNCVSPYAVSSPMAKGFLK 210
           + VN V P  + +   +  L+
Sbjct: 173 VTVNSVLPGYIDTERVRRLLE 193

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 92.5 bits (230), Expect = 6e-23
 Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 27/202 (13%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVAL+TG +  +G   A++ ++ GAKV++A  + +  + +  +I +   +A+    V
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAH---VV 63

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT  + I+ AV  A ++ G +DI+ NN+G+    K  ++D   A+F+ +   N  GA
Sbjct: 64  SLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK--LVDVTPADFDFVFDTNTRGA 121

Query: 131 FLGTKHAARVM----------KPAGRGSIISTASVCGV-----IGGVTSHAYTSSKHGVV 175
           F   +  A+ M          KP GR  II+ ASV G+     IG      Y  SK  VV
Sbjct: 122 FFVAQEVAKRMIARAKGAGNTKPGGR--IINIASVAGLRVLPQIG-----LYCMSKAAVV 174

Query: 176 GLMKNTAVELGRFGIRVNCVSP 197
            + +  A+E GR GI VN + P
Sbjct: 175 HMTRAMALEWGRHGINVNAICP 196

Length = 258

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 91.7 bits (228), Expect = 7e-23
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 8/196 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K   ITG A  IG   A LF+++G  V + DI +D   ++  ++      A        D
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELG-----AENVVAGALD 55

Query: 74  VTKEKDIENAVNT-AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           VT       A+   A +  G+LD +FNNAG+         D   A  +R++ +N+ G   
Sbjct: 56  VTDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFE--DVPLAAHDRMVDINVKGVLN 113

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           G   A   +K      +I+TAS   + G      Y+++K  V GL +   VE  R GIRV
Sbjct: 114 GAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRV 173

Query: 193 NCVSPYAVSSPMAKGF 208
             V P+ V +P+    
Sbjct: 174 ADVWPWFVDTPILTKG 189

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 93.1 bits (232), Expect = 7e-23
 Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 13/202 (6%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
             L GKV ++TG A  IG   AR     GAK+ + D+++    ++  ++           
Sbjct: 5   TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDD----RVL 60

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DVT    ++ A   AV ++G +D++  NAGI      ++   D   F R++ VNL+
Sbjct: 61  TVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGG--SVAQVDPDAFRRVIDVNLL 118

Query: 129 GAFLGTKHAARVMKPA---GRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           G F    H  R   PA    RG ++  +S+          AY +SK GV        +E+
Sbjct: 119 GVF----HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEV 174

Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
              G+ V       + + + + 
Sbjct: 175 AHHGVTVGSAYLSWIDTDLVRD 196

Length = 296

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 92.8 bits (231), Expect = 7e-23
 Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 11/174 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              GKVA+ITG A   G   AR+ +  G K+++AD++ D  +    ++ +  +   G   
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLG--- 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV+    +E   + A+ ++G + ++FNNAG+   A   + +N  A++E +L VNL G
Sbjct: 60  VRTDVSDAAQVEALADAALERFGAVHLLFNNAGV--GAGGLVWENSLADWEWVLGVNLWG 117

Query: 130 AFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
              G +    +M       PA  G I++TAS+ G++       Y  SKH VV L
Sbjct: 118 VIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSL 171

Length = 287

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 92.3 bits (230), Expect = 7e-23
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 25/193 (12%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G+V L+TGG   IG   AR F   GA V+           VC   +  +       + 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVV-----------VCGRRAPETVDGRPAEFH 52

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDNDQAEFERILSV 125
             DV     +   V+  V ++G+LD++ NNAG     +  EA P          E+I+ +
Sbjct: 53  AADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRF-------HEKIVEL 105

Query: 126 NLVGAFLGTKHAARVMKP-AGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL+   L  + A  VM+   G GSI++  SV G      + AY ++K G++ L ++ AVE
Sbjct: 106 NLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVE 165

Query: 185 LGRFGIRVNCVSP 197
                +RVN V  
Sbjct: 166 WAP-KVRVNAVVV 177

Length = 252

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 92.2 bits (229), Expect = 2e-22
 Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 16/205 (7%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSS 62
             + +  L GKVA++TG A  +G   A   ++ GA V++ D+   L    V ++I ++ +
Sbjct: 3   RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGA 62

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFER 121
            A     V  D+++    +  V TAV   G LDI+ NNAGI  D    N+ D    E++ 
Sbjct: 63  KA---VAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDE---EWDA 115

Query: 122 ILSVNLVGAFLGTKHAA---RVMKPAGRGS----IISTASVCGVIGGVTSHAYTSSKHGV 174
           +++V+L G FL T++AA   R    A  G     I++T+S  G++G V    Y ++K G+
Sbjct: 116 VIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGI 175

Query: 175 VGLMKNTAVELGRFGIRVNCVSPYA 199
             L  + A  LGR+G+R N + P A
Sbjct: 176 TALTLSAARALGRYGVRANAICPRA 200

Length = 306

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 90.0 bits (224), Expect = 5e-22
 Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 10/193 (5%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
            ITG A  IG   A LF+  G +V   DI +    ++  ++      A        DVT 
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVTD 59

Query: 77  EKDIENAVN--TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
               + A+    A +  G+LD++FNNAGI+    P   D      +R++ +N+ G   G 
Sbjct: 60  RAAWDAALADFAAATG-GRLDVLFNNAGIL-RGGP-FEDIPLEAHDRVIDINVKGVLNGA 116

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
             A   +K      +I+T+S   + G      Y+++K  V GL +   +E  R GIRV  
Sbjct: 117 HAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVAD 176

Query: 195 VSPYAVSSPMAKG 207
           V P  V + M  G
Sbjct: 177 VMPLFVDTAMLDG 189

Length = 260

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 1e-21
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 23/191 (12%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
             KVAL+TG +  IG   A   ++ G +V         G S   + + ++    G   + 
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF--------GTS--RNPARAAPIP-GVELLE 51

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSVN 126
            DVT +  ++ AV+  +++ G++D++ NNAG+      +E+         A+ + +   N
Sbjct: 52  LDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSI-------AQAQALFDTN 104

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G    T+     M+  G G II+ +SV G +       Y +SKH V G  ++   E+ 
Sbjct: 105 VFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVR 164

Query: 187 RFGIRVNCVSP 197
           +FGIRV+ V P
Sbjct: 165 QFGIRVSLVEP 175

Length = 270

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.5 bits (220), Expect = 2e-21
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 8/197 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
            VAL+TGG   IG   AR  +  G  + I D  DD  E +        +      +   D
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD--EELAATQQELRALGVEVIFFPAD 60

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V      E  ++ A + +G++D + NNAG+  + + ++LD     F+R+L++NL G F  
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 134 TKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           T+  A+ M      +     SI+  +SV  ++       Y  SK G+    +  A  L  
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 188 FGIRVNCVSPYAVSSPM 204
            GI V  V P  + + M
Sbjct: 181 EGIGVYEVRPGLIKTDM 197

Length = 256

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 88.0 bits (218), Expect = 3e-21
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 7/194 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R +GKV ++TG A  IG   A   +  GA+VL+ D   +L   V  +I ++  +A     
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDR-SELVHEVLAEILAAGDAA---HV 56

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+      +  V  AV ++G++D++ NN G    AKP     ++ + E  +  +L  
Sbjct: 57  HTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKP-YEHYEEEQIEAEIRRSLFP 115

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
                +     M    +G I++ +S+     G+    Y+++K GV  L  + A E  R G
Sbjct: 116 TLWCCRAVLPHMLERQQGVIVNVSSI--ATRGIYRIPYSAAKGGVNALTASLAFEHARDG 173

Query: 190 IRVNCVSPYAVSSP 203
           IRVN V+P    +P
Sbjct: 174 IRVNAVAPGGTEAP 187

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 87.4 bits (217), Expect = 3e-21
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
            LITG +  IG   AR F+K G  V +A  + D  + +  ++ +             DVT
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNP---NPSVEVEILDVT 57

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFLGT 134
            E+  +  +    ++ G LD++  NAG+    K   L +   + F   +  NL+GA    
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGV---GKGTSLGDLSFKAFRETIDTNLLGAAAIL 114

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           + A    +  GRG ++  +SV  + G   + AY++SK  +  L ++   ++ + GIRV  
Sbjct: 115 EAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174

Query: 195 VSPYAVSSPMA 205
           ++P  + +P+ 
Sbjct: 175 INPGFIDTPLT 185

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 87.5 bits (217), Expect = 4e-21
 Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 13/190 (6%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHC 72
           +V L+TG +  +G   AR F++ GA+V++   +  +  E+V  +    + +         
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQA------ 54

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD-----EAKPNILDNDQAEFERILSVNL 127
           DV     ++  +  A + +G +D + NNA ++D     + +      D  ++++ L   +
Sbjct: 55  DVRDRDQVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAV 113

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            GA    +      K  G G +I+  +       V  H YT++K  ++G  +N A ELG 
Sbjct: 114 KGALNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGP 173

Query: 188 FGIRVNCVSP 197
           +GI VN VS 
Sbjct: 174 YGITVNMVSG 183

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 87.4 bits (217), Expect = 4e-21
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 4/178 (2%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
           VA + G    +G   AR F+  G  V +A  ++   E++  DI   +        V  D 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDA--GGSAKAVPTDA 58

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
             E ++    +    + G L+++  NAG        IL+     FE++  +   G FL  
Sbjct: 59  RDEDEVIALFDLIEEEIGPLEVLVYNAG--ANVWFPILETTPRVFEKVWEMAAFGGFLAA 116

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           + AA+ M   GRG+II T +   + G     A+  +K  +  L ++ A ELG  GI V
Sbjct: 117 REAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.5 bits (223), Expect = 5e-21
 Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 20/193 (10%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADI---KDDLGESVCEDISSSSSSANGC 67
           L GKVAL+TG A  IG   A + ++ GA V+  D+    + L  +V   +        G 
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRV--------GG 258

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVN 126
           + +  D+T              ++G LDI+ +NAGI    +   L N D+A ++ +L+VN
Sbjct: 259 TALALDITAPDAPARIAEHLAERHGGLDIVVHNAGIT---RDKTLANMDEARWDSVLAVN 315

Query: 127 LVGAFLGTKH--AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           L+     T+   AA  +   GR  I+  +S+ G+ G      Y +SK GV+GL++  A  
Sbjct: 316 LLAPLRITEALLAAGALGDGGR--IVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPL 373

Query: 185 LGRFGIRVNCVSP 197
           L   GI +N V+P
Sbjct: 374 LAERGITINAVAP 386

Length = 450

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 86.5 bits (214), Expect = 8e-21
 Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L  ++ L+TG +  IG  AA  ++++GA V++    ++    V + I+           +
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++ +         Y +LD + +NAG++ +  P    N Q  ++ +  VN+   
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQ-VWQDVXQVNVNAT 120

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ T+    ++  +  GS++ T+S  G  G     AY  SK    GL +  A E  +  +
Sbjct: 121 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNL 180

Query: 191 RVNCVSPYAVSSPM-AKGF 208
           RVNC++P    + M A  F
Sbjct: 181 RVNCINPGGTRTAMRASAF 199

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 86.4 bits (214), Expect = 1e-20
 Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 4/192 (2%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K+AL+TG    IG   AR     G +V+         +   +       + +       D
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG--NDCAKDWFEEYGFTEDQVRLKELD 60

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           VT  ++   A+     + G +DI+ NNAGI  ++          E+  +++ NL   F  
Sbjct: 61  VTDTEECAEALAEIEEEEGPVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNV 118

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
           T+     M   G G II+ +SV G+ G      Y+++K G++G  K  A E  R+GI VN
Sbjct: 119 TQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVN 178

Query: 194 CVSPYAVSSPMA 205
           C++P  +++PM 
Sbjct: 179 CIAPGYIATPMV 190

Length = 245

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.9 bits (213), Expect = 1e-20
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 9/202 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANGCSY 69
           L+ KV ++TG    IG   A   +K G+ V++ A  + +      + +  +     G   
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--- 60

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV+  +  E      + +YG  DI+ NNAG+     P  L+ D    ++ +S +   
Sbjct: 61  VLADVSTREGCETLAKATIDRYGVADILVNNAGL-GLFSP-FLNVDDKLIDKHISTDFKS 118

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               ++  A+ M+    G+I++ ASV G+        Y + K  V+ L K  A+EL    
Sbjct: 119 VIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-K 175

Query: 190 IRVNCVSPYAVSSPMAKGFLKL 211
           IRVN ++P  V + + +   K+
Sbjct: 176 IRVNAIAPGFVKTKLGESLFKV 197

Length = 252

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 85.3 bits (211), Expect = 3e-20
 Identities = 57/190 (30%), Positives = 102/190 (53%), Gaps = 12/190 (6%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS-- 68
           L GKVA+ITG    +G+  A   +K GA ++   + +          + +   A G    
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-------APETQAQVEALGRKFH 58

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           ++  D+ ++KDI++ V+ AV   G +DI+ NNAGI+   + ++L+    +++ ++++N  
Sbjct: 59  FITADLIQQKDIDSIVSQAVEVMGHIDILINNAGII--RRQDLLEFGNKDWDDVININQK 116

Query: 129 GAF-LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
             F L    A + +K    G II+ AS+    GG+   +YT+SK  V+GL +  A EL +
Sbjct: 117 TVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQ 176

Query: 188 FGIRVNCVSP 197
           + I VN ++P
Sbjct: 177 YNINVNAIAP 186

Length = 251

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 84.9 bits (211), Expect = 4e-20
 Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 18/206 (8%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY- 69
             GK   +TG A  IG   A  F + GAKV+  D               +  +     + 
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQ--------------AFLTQEDYPFA 51

Query: 70  -VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
               DV+    +       +++ G LD++ N AGI+     + L ++   +++  +VN  
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDED--WQQTFAVNAG 109

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   +      +    G+I++  S    +  +   AY +SK  +  L K   +EL  +
Sbjct: 110 GAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPY 169

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
           G+R N VSP +  + M +     +D 
Sbjct: 170 GVRCNVVSPGSTDTDMQRTLWVDEDG 195

Length = 252

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 84.1 bits (208), Expect = 7e-20
 Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 9/189 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG-CSYVHC 72
           KV LITG +  IG   A L +  G  V I   +D    +  E+ + +  +A G    V  
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARD---AAAAEETADAVRAAGGRACVVAG 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DV  E D+    +   S +G+LD + NNAGIV  + P + D D A   R+   N++GA+L
Sbjct: 60  DVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP-LADMDAARLRRMFDTNVLGAYL 118

Query: 133 GTKHAARVM---KPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELGRF 188
             + AAR +   +    G+I++ +S+   +G    +  Y  SK  V  L    A ELG  
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPH 178

Query: 189 GIRVNCVSP 197
           G+RVN V P
Sbjct: 179 GVRVNAVRP 187

Length = 248

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 84.5 bits (209), Expect = 8e-20
 Identities = 61/195 (31%), Positives = 87/195 (44%), Gaps = 10/195 (5%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M    Q +  L+TGG   IG+  A      GA V+I     D   +  E+I +    A  
Sbjct: 1   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGA 59

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             Y   DVT E  +  AV+ A + +G+L  + + AG  +   P I   D   + R + +N
Sbjct: 60  VRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGP-ITQIDSDAWRRTVDLN 118

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH----AYTSSKHGVVGLMKNTA 182
           + G     KHAAR +   G GS +  +S    I    +H    AY  +K  V  LMK  A
Sbjct: 119 VNGTMYVLKHAARELVRGGGGSFVGISS----IAASNTHRWFGAYGVTKSAVDHLMKLAA 174

Query: 183 VELGRFGIRVNCVSP 197
            ELG   +RVN + P
Sbjct: 175 DELGPSWVRVNSIRP 189

Length = 276

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 83.4 bits (207), Expect = 8e-20
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 21/202 (10%)

Query: 14  KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCS--YV 70
           KVAL+TG    IG    R  +K G   V++     + G++  E +      A G S  + 
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLR-----AEGLSVRFH 55

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV----DEAKPNILDNDQAEFERILSVN 126
             DVT +  IE A +    +YG LDI+ NNAGI     D++ P      + +    +  N
Sbjct: 56  QLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTP-----TREQARETMKTN 110

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
             G    T+    ++K +  G I++ +S      G  + AY  SK  +  L +  A EL 
Sbjct: 111 FFGTVDVTQALLPLLKKSPAGRIVNVSS----GLGSLTSAYGVSKAALNALTRILAKELK 166

Query: 187 RFGIRVNCVSPYAVSSPMAKGF 208
             GI+VN   P  V + M  G 
Sbjct: 167 ETGIKVNACCPGWVKTDMGGGK 188

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 84.1 bits (208), Expect = 8e-20
 Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 11/196 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+G+V L+TGGA  +G      F   GA+V + D      +S        ++  +    
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD------KSAAGLQELEAAHGDAVVG 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNI---LDNDQAEFERILSVN 126
           V  DV    D + AV   V+ +GK+D +  NAGI D +   +    D     F+ +  +N
Sbjct: 56  VEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHIN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G  L  K AA     A RGS+I T S  G         YT++KH VVGL+K  A EL 
Sbjct: 116 VKGYLLAVK-AALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA 174

Query: 187 RFGIRVNCVSPYAVSS 202
            + +RVN V+P  +SS
Sbjct: 175 PY-VRVNGVAPGGMSS 189

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 1e-19
 Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 17/200 (8%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHC 72
           KV +ITG +  IG   A L ++ G  V +  +++ D  E+V + I      A     V  
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA---VAA 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DV  E D+         + G+LD + NNAGI+ EA+  +   D A   RI + N+VG+FL
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGIL-EAQMRLEQMDAARLTRIFATNVVGSFL 118

Query: 133 GTKHAARVMKP--AGR-GSIISTASVCGVIGGVTSHA-YTSSKHGV----VGLMKNTAVE 184
             + A + M     GR G+I++ +S+   +G    +  Y +SK  +    +GL K  A E
Sbjct: 119 CAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE 178

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN V P  + + +
Sbjct: 179 ----GIRVNAVRPGVIYTEI 194

Length = 248

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 84.1 bits (208), Expect = 2e-19
 Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 8/197 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL--GESVCEDISSSSSSANGC 67
           RLQG+ ALITG    IG   A  F++ GA + +  + ++      V + I +    A   
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVA- 110

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
             +  D+  E      V  AV + G LDI+ N AG    A  +I D    +F+     N+
Sbjct: 111 --LPGDLKDEAFCRQLVERAVKELGGLDILVNIAG-KQTAVKDIADITTEQFDATFKTNV 167

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
              F   K A   + P    SII+T S+       T   Y S+K  +V   K  A ++  
Sbjct: 168 YAMFWLCKAAIPHLPPG--ASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAE 225

Query: 188 FGIRVNCVSPYAVSSPM 204
            GIRVN V+P  V +P+
Sbjct: 226 KGIRVNAVAPGPVWTPL 242

Length = 300

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 82.9 bits (205), Expect = 2e-19
 Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 11/199 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           + GK+ L+TGG+  IG   A+ F + GA+V+I+  K +     C D +   S+   C  +
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAE----ACADAAEELSAYGECIAI 59

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D++ E+ IE  V     +  +LD++ NNAG    A   +    ++ +++++ +N+   
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGA--PLEAFPESGWDKVMDINVKSV 117

Query: 131 FLGTKHAARVMKPAGR----GSIISTASVCGVIG-GVTSHAYTSSKHGVVGLMKNTAVEL 185
           F  T+    +++ A        +I+  S+ G++  G+ +++Y +SK  V  L +  A EL
Sbjct: 118 FFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKEL 177

Query: 186 GRFGIRVNCVSPYAVSSPM 204
               I VN ++P    S M
Sbjct: 178 AGEHITVNAIAPGRFPSKM 196

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 84.6 bits (210), Expect = 4e-19
 Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 6/189 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              GK+ ++TG    IG   A  F++ GA+V+ +DI +   E   E I ++ + A+  +Y
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAH--AY 369

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DV+    +E       +++G  DI+ NNAGI   A    LD    +++R+L VNL G
Sbjct: 370 R-VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI-GMAGG-FLDTSAEDWDRVLDVNLWG 426

Query: 130 AFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
              G +   R M   G  G I++ AS        +  AY +SK  V+ L +    EL   
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAA 486

Query: 189 GIRVNCVSP 197
           GI V  + P
Sbjct: 487 GIGVTAICP 495

Length = 582

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 82.1 bits (203), Expect = 5e-19
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 7/195 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G+ AL+TG +  IG   A   ++ GA+V++         +  E +     SA+  ++ 
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAF- 66

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVG 129
             DVT    +  A++   ++ G +DI+ NNAG+        L++  A+ FER+L  N+  
Sbjct: 67  --DVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTP---LEDFPADAFERLLRTNISS 121

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F   +  AR M   G G II+ ASV   +       YT++K  V  L K  A +  + G
Sbjct: 122 VFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHG 181

Query: 190 IRVNCVSPYAVSSPM 204
           ++ N ++P    +P+
Sbjct: 182 LQCNAIAPGYFDTPL 196

Length = 255

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 81.5 bits (201), Expect = 9e-19
 Identities = 50/188 (26%), Positives = 100/188 (53%), Gaps = 8/188 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVA++TG    +G+  A   ++ G  ++  +I +       E I   ++       +
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT-----ETIEQVTALGRRFLSL 62

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+ K   I   +  AV+++G +DI+ NNAG++   + + ++  + +++ ++++N+   
Sbjct: 63  TADLRKIDGIPALLERAVAEFGHIDILVNNAGLI--RREDAIEFSEKDWDDVMNLNIKSV 120

Query: 131 FLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           F  ++ AA+     G G  II+ AS+    GG+   +YT+SK GV+G+ +  A E  +  
Sbjct: 121 FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN 180

Query: 190 IRVNCVSP 197
           I VN ++P
Sbjct: 181 INVNAIAP 188

Length = 253

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 81.0 bits (200), Expect = 1e-18
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 14/199 (7%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
            ++TG A  IG   AR   + GA V+  D+   L     + +  +            DV 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL----------DVA 50

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFLGT 134
               +    +  ++++G +D + N AG++   +P   D    E +E+  +VN+ G F   
Sbjct: 51  DAAAVREVCSRLLAEHGPIDALVNCAGVL---RPGATDPLSTEDWEQTFAVNVTGVFNLL 107

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           +  A  MK    G+I++ AS    +  ++  AY +SK  +  L K   +EL  +G+R N 
Sbjct: 108 QAVAPHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNV 167

Query: 195 VSPYAVSSPMAKGFLKLDD 213
           VSP +  + M +     +D
Sbjct: 168 VSPGSTDTAMQRTLWHDED 186

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 80.7 bits (200), Expect = 1e-18
 Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 30/213 (14%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG------ESVCEDISSSSSSA 64
           L+ ++ L+TG    IG  AA  +++HGA V++      LG      E+V ++I ++    
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVIL------LGRTEEKLEAVYDEIEAAGGPQ 63

Query: 65  --------NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ 116
                      +  +             +T   Q+G+LD + +NAG++ E  P +   D 
Sbjct: 64  PAIIPLDLLTATPQNYQ--------QLADTIEEQFGRLDGVLHNAGLLGELGP-MEQQDP 114

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
             ++ ++ VN+   F+ T+    ++  +   S++ T+S  G  G     AY  SK    G
Sbjct: 115 EVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEG 174

Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSSPM-AKGF 208
           +M+  A E     +RVNC++P    + M A  F
Sbjct: 175 MMQVLADEYQGTNLRVNCINPGGTRTAMRASAF 207

Length = 247

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 80.4 bits (199), Expect = 1e-18
 Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 27/202 (13%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
             ALITG +  IG+  A  F+K G  + L+A  +D L E++  ++ S+   A        
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKAA---AYSI 62

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D++  + I   +   + Q+G  D++ NNAG+       +L+   ++++ ++ +NL   F 
Sbjct: 63  DLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTG--PLLEMPLSDWQWVIQLNLTSVFQ 120

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA----------YTSSKHGVVGLMKNTA 182
                   M+  G G II+          V+S A          Y  SK  +    K  A
Sbjct: 121 CCSAVLPGMRARGGGLIIN----------VSSIAARNAFPQWGAYCVSKAALAAFTKCLA 170

Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
            E    GIRV  ++  AV++P+
Sbjct: 171 EEERSHGIRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 23/206 (11%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
            M+ R  GKV ++TG A  IG   A   +  GA+V++ D + +L   V  ++ ++   A 
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVD-RSELVHEVAAELRAAGGEAL 59

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP-------NILDNDQAE 118
               +  D+      + A+  AV  +G++D++ NN G    AKP        I    +AE
Sbjct: 60  A---LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQI----EAE 112

Query: 119 FERILSVNLVGAFLGTKHAA-RVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
             R L   L         A    M   G G+I++ +S+     G+    Y+++K GV  L
Sbjct: 113 IRRSLFPTLWCC-----RAVLPHMLAQGGGAIVNVSSI--ATRGINRVPYSAAKGGVNAL 165

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSP 203
             + A E    GIRVN V+P    +P
Sbjct: 166 TASLAFEYAEHGIRVNAVAPGGTEAP 191

Length = 260

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 80.6 bits (199), Expect = 2e-18
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 8/196 (4%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
           VA++TG +  IG   A   +  G  + I D+ DD  +   E ++   ++     Y   D+
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDD--DQATEVVAEVLAAGRRAIYFQADI 60

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
            +  D E  ++ A   +G+LD + NNAGI    + ++LD  +  F+R++++NL G F  T
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 135 KHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           +  AR M            SII   S+   +       Y  SK G+    +  A  L   
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADE 180

Query: 189 GIRVNCVSPYAVSSPM 204
           GI V+ + P  + + M
Sbjct: 181 GIAVHEIRPGLIHTDM 196

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 80.0 bits (197), Expect = 3e-18
 Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 11/203 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G+ AL+TG +G IGE  ARL    GA V +   + +  E++  ++             
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER------VKIF 57

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             +++   +++     A +    +DI+ NNAGI  +     +     +++ +L VNL   
Sbjct: 58  PANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGL--FVRMSDEDWDSVLEVNLTAT 115

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  T+     M     G II+  SV GV G      Y +SK G++G  K+ A E+    +
Sbjct: 116 FRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNV 175

Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
            VNCV+P  + S M     KL+D
Sbjct: 176 TVNCVAPGFIESAMTG---KLND 195

Length = 245

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 79.7 bits (197), Expect = 5e-18
 Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 5/192 (2%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K   +TG A  IG   A   +  GA++ + D   D       D  +   +     +   D
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVP--EHRALD 58

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           ++    +        + +G +D++ N AGI      + L ++Q  + R++ VNL+G    
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQ--WRRMVDVNLMGPIHV 116

Query: 134 TKHAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            +     M  AGRG  +++ +S  G++      AY++SK G+ GL +    +L R GI V
Sbjct: 117 IETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGV 176

Query: 193 NCVSPYAVSSPM 204
           + V P AV +P+
Sbjct: 177 SVVVPGAVKTPL 188

Length = 272

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 79.0 bits (195), Expect = 6e-18
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 8/195 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY--VH 71
           ++AL+TGG G IG    +  +K G +V      +        +       A G  +  V 
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRV----AANCGPNEERAEAWLQEQGALGFDFRVVE 56

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DV+  +  + AV    ++ G +D++ NNAGI  +A    +     ++  ++  NL   F
Sbjct: 57  GDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMT--YEQWSAVIDTNLNSVF 114

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             T+     M+  G G II+ +SV G  G      Y+++K G++G  K  A E    G+ 
Sbjct: 115 NVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVT 174

Query: 192 VNCVSPYAVSSPMAK 206
           VN +SP  +++ M  
Sbjct: 175 VNTISPGYIATDMVM 189

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 79.2 bits (195), Expect = 8e-18
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 16/196 (8%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           G+ A+ITGGA  IG      F++ GA+V++ D+           + +     +G   V C
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHG---VMC 62

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG--- 129
           DV   +++ +  + A    G +D++F+NAGIV    P I++    ++  ++ V+L G   
Sbjct: 63  DVRHREEVTHLADEAFRLLGHVDVVFSNAGIV-VGGP-IVEMTHDDWRWVIDVDLWGSIH 120

Query: 130 ---AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
              AFL      R+++    G ++ TAS  G++      AY  +K+GVVGL +  A E+ 
Sbjct: 121 TVEAFL-----PRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT 175

Query: 187 RFGIRVNCVSPYAVSS 202
             GI V+ + P  V +
Sbjct: 176 ADGIGVSVLCPMVVET 191

Length = 275

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 78.7 bits (194), Expect = 1e-17
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL  +VA++TG    +G   A  F++ GA VLIA   +   + V E I ++   A+    
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAH---V 63

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVNLV 128
           V  D+   +        AV  +G+LDI+ NN G      PN +L     +     + N+ 
Sbjct: 64  VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVG---GTMPNPLLSTSTKDLADAFTFNVA 120

Query: 129 GAFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            A   T  A  +M + +G GS+I+ +S  G + G    AY ++K  +    +  A++L  
Sbjct: 121 TAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP 180

Query: 188 FGIRVNCVSP 197
             IRVN ++P
Sbjct: 181 -RIRVNAIAP 189

Length = 263

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 3e-17
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 16/202 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GK  L+TG +  IGE AA  F++ GA V+    ++DL ++V + I+ +   A     
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDA---MA 93

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDNDQAEFERILS 124
           V CD++    ++  V     + G +DI+ NNAG      + E+    LD    + ER + 
Sbjct: 94  VPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAES----LDRWH-DVERTMV 148

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS--HAYTSSKHGVVGLMKNTA 182
           +N        +  A  M   G G II+ A+  GV+   +     Y +SK  +  + +   
Sbjct: 149 LNYYAPLRLIRGLAPGMLERGDGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRVIE 207

Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
            E G  G+    +    V++PM
Sbjct: 208 TEWGDRGVHSTTLYYPLVATPM 229

Length = 293

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 76.2 bits (188), Expect = 6e-17
 Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 25/194 (12%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLI---------ADIKDDLGESVCEDISSSSSSA 64
            VAL+TG A  IG   A   +  G +V++           +KD+L           ++  
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDEL-----------NALR 49

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
           N    V  D++      + V  A   +G+ D++ NNA              +  +  +  
Sbjct: 50  NSAVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPL--GQGSEDAWAELFG 107

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAV 183
           +NL   +L  +  AR +  +  GSII+          +T + AY  SK  + GL ++ A+
Sbjct: 108 INLKAPYLLIQAFARRLAGSRNGSIINI-IDAMTDRPLTGYFAYCMSKAALEGLTRSAAL 166

Query: 184 ELGRFGIRVNCVSP 197
           EL    IRVN ++P
Sbjct: 167 ELAPN-IRVNGIAP 179

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 75.0 bits (185), Expect = 2e-16
 Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 39/200 (19%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIA----DIKDDLGESVCEDISSSSSSANGC 67
           Q KVAL+TG +  IG+  AR  +  G  V  A    D  +DL             ++ G 
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-------------ASLGV 48

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI----------VDEAKPNILDNDQA 117
             +  DVT E  I+ AV+T +++ G++D++ NNAG           +DEA+         
Sbjct: 49  HPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEAR--------R 100

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           +FE    VNL GA   T+     M+    G II+ +S+ G I       Y ++K  + G 
Sbjct: 101 QFE----VNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGF 156

Query: 178 MKNTAVELGRFGIRVNCVSP 197
                +E+  FGI V  + P
Sbjct: 157 SDALRLEVAPFGIDVVVIEP 176

Length = 273

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 9/201 (4%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
            LITG +  IG    R     G   +IA  +D    +    + +S S       +  DVT
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRL---HILELDVT 57

Query: 76  KE-KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
            E  +   AV   +     LD++ NNAGI+    P   + D  +   +  VN++G  L T
Sbjct: 58  DEIAESAEAVAERLGD-AGLDVLINNAGILHSYGP-ASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTS---HAYTSSKHGVVGLMKNTAVELGRFGIR 191
           +    ++    R  II+ +S  G IG  TS   ++Y +SK  +  L K+ AVEL R GI 
Sbjct: 116 QAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 192 VNCVSPYAVSSPMAKGFLKLD 212
           V  + P  V + M   F K  
Sbjct: 176 VVSLHPGWVRTDMGGPFAKNK 196

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 19/194 (9%)

Query: 11  LQGKVALITG-GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           L+GKV +++G G G +G   A   ++ GA V++A    +  + V  +I            
Sbjct: 3   LKGKVVVVSGVGPG-LGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---ALA 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  D+T E    N V  A+ ++G++D + NNA  V   KP + D D A +  ++ +N++G
Sbjct: 59  VPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKP-LADADFAHWRAVIELNVLG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH------AYTSSKHGVVGLMKNTAV 183
               T+     +  +G GSI+   S+      V  H      AY  +K  ++   ++ A 
Sbjct: 118 TLRLTQAFTPALAESG-GSIVMINSM------VLRHSQPKYGAYKMAKGALLAASQSLAT 170

Query: 184 ELGRFGIRVNCVSP 197
           ELG  GIRVN V+P
Sbjct: 171 ELGPQGIRVNSVAP 184

Length = 258

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 74.4 bits (183), Expect = 4e-16
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 13/211 (6%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA--DIKDDLGESVCEDISSSSSSANGCS 68
           L GK+AL+TG +  IG   A    + GA V I    I   L     E+I +       C 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQL-PGTAEEIEARGGK---CI 56

Query: 69  YVHCDVTKEKDIENAV-NTAVSQYGKLDIMFNNA-----GIVDEAKPNILDNDQAEFERI 122
            V CD + + ++E      A  Q G+LDI+ NNA      I+        +     ++ I
Sbjct: 57  PVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDI 116

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            +V L   +  + +AA +M  AG+G I+  +S  G +  + + AY   K  +  +  + A
Sbjct: 117 NNVGLRAHYACSVYAAPLMVKAGKGLIVIISST-GGLEYLFNVAYGVGKAAIDRMAADMA 175

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
            EL   G+ V  + P  V + +     + D+
Sbjct: 176 HELKPHGVAVVSLWPGFVRTELVLEMPEDDE 206

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.6 bits (181), Expect = 6e-16
 Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 28/201 (13%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCS 68
           ++  +  L+TGG+  +G   AR F++ GA+V++   + +D  E++ +++   + +     
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIA----- 56

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGK-LDIMFNNAGIVD-----EAKPNILDNDQAEFERI 122
            +  DVT  + ++    TA   +GK +  + NNA + D     +A+    D    +F++ 
Sbjct: 57  -LQADVTDREQVQAMFATATEHFGKPITTVVNNA-LADFSFDGDARKKADDITWEDFQQQ 114

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------VTSHAYTSSKHGVV 175
           L  ++ GA    + A   M+  G G II+       IG        V  H YT++K  ++
Sbjct: 115 LEGSVKGALNTIQAALPGMREQGFGRIIN-------IGTNLFQNPVVPYHDYTTAKAALL 167

Query: 176 GLMKNTAVELGRFGIRVNCVS 196
           GL +N A ELG +GI VN VS
Sbjct: 168 GLTRNLAAELGPYGITVNMVS 188

Length = 253

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 74.3 bits (182), Expect = 6e-16
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL--GESVCEDISSSSSSAN 65
           S RL+ + AL+TGG   IG  AA  +++ GA V I+ +  +    + V + I      A 
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA- 102

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               +  D++ EK   + V+ A    G LDIM   AG    A P+I D    +F++  ++
Sbjct: 103 --VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAG-KQVAIPDIADLTSEQFQKTFAI 159

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+   F  T+ A  ++ P G  SII+T+S+           Y ++K  ++   +  A ++
Sbjct: 160 NVFALFWLTQEAIPLL-PKG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 186 GRFGIRVNCVSPYAVSSPM 204
              GIRVN V+P  + + +
Sbjct: 218 AEKGIRVNIVAPGPIWTAL 236

Length = 294

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 72.7 bits (179), Expect = 1e-15
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 19/192 (9%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIA--------DIKDDLGESVCEDISSSSSSAN 65
           K  LITG +  IGE  AR F+K GAK+++         ++ D+LG      +        
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLP------ 54

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               +  DV+  + IE A+     ++  +DI+ NNAG+     P   + D  ++E ++  
Sbjct: 55  ----LQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDP-AQEADLEDWETMIDT 109

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+ G    T+    +M    +G II+  S+ G       + Y ++K  V     N   +L
Sbjct: 110 NVKGLLNVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDL 169

Query: 186 GRFGIRVNCVSP 197
              GIRV  + P
Sbjct: 170 IGTGIRVTNIEP 181

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-15
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSVNL 127
           DVT    +  AV TAV  +G+LDI+ NNAG      ++E         ++E    +  N 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEV-------TESEARAQIDTNF 109

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            GA   T+     ++    G II  +S+ G+     S  Y +SK  + G+ +  A E+  
Sbjct: 110 FGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAE 169

Query: 188 FGIRVNCVSP 197
           FGI+V  V P
Sbjct: 170 FGIKVTLVEP 179

Length = 275

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 72.6 bits (179), Expect = 1e-15
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 5/143 (3%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKV +ITG    IG+  AR  +K GA V+IA   ++ GE    +I   + +A     +  
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAK-VEVIQL 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D++    +       ++++ +LDI+ NNAGI+  A P  L  D   FE   +VN +G FL
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGIM--APPRRLTKDG--FELQFAVNYLGHFL 115

Query: 133 GTKHAARVMKPAGRGSIISTASV 155
            T     V+K +    I++ +S+
Sbjct: 116 LTNLLLPVLKASAPSRIVNVSSI 138

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 72.4 bits (178), Expect = 2e-15
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 16/205 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCS 68
              GKVAL+TG +  IG+  A   ++ G  + +   +     E   E+I +    A    
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKA---L 57

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNA--GIVDEAKPNILDNDQAEFERILSVN 126
            V  +V   + I+        ++G+LD+  NNA  G++   +P  ++ +++ ++  +++N
Sbjct: 58  AVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVL---RP-AMELEESHWDWTMNIN 113

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS---SKHGVVGLMKNTAV 183
                   + AA++M+  G G IIS +S+ G I  + +  YT+   SK  +  L +  AV
Sbjct: 114 AKALLFCAQEAAKLMEKVGGGKIISLSSL-GSIRYLEN--YTTVGVSKAALEALTRYLAV 170

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGF 208
           EL   GI VN VS  AV +   K F
Sbjct: 171 ELAPKGIAVNAVSGGAVDTDALKHF 195

Length = 250

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 2e-15
 Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDISSSSSSAN 65
           L+GKV LI GGA ++G   AR  +  GAK +      A  K D  E+V   + ++ + A 
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETV-AAVKAAGAKA- 63

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
                  D+T    +E   + A + +G+ DI  N  G V   K  I++  +AE++ + +V
Sbjct: 64  --VAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKV--LKKPIVEISEAEYDEMFAV 119

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N   AF   K A R +   G+   + T S+ G      S AY  SK  V    +  + E 
Sbjct: 120 NSKSAFFFIKEAGRHLNDNGKIVTLVT-SLLGAFTPFYS-AYAGSKAPVEHFTRAASKEF 177

Query: 186 GRFGIRVNCVSPYAVSSP 203
           G  GI V  V P  + +P
Sbjct: 178 GARGISVTAVGPGPMDTP 195

Length = 257

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 69.6 bits (170), Expect = 5e-15
 Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 3/97 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M  +L GKVA++TGG   IG   A L +K GAKV++ DI  + G++  E+I++    A  
Sbjct: 10  MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALF 69

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI 103
            SY   D+ K+ D +  ++  ++ + ++D++F NAG+
Sbjct: 70  VSY---DMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 71.1 bits (175), Expect = 6e-15
 Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 13/198 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+ K  L+TG +G IG+  A   +  GA++L+            E +++         +
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN----AEKLEALAARLPYPGRHRW 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
           V  D+T E   E AV     + G ++++ NNAG+   A   +L++ D    ER+L++NL 
Sbjct: 58  VVADLTSEAGRE-AVLARAREMGGINVLINNAGVNHFA---LLEDQDPEAIERLLALNLT 113

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIG--GVTSHAYTSSKHGVVGLMKNTAVELG 186
                T+    +++      +++  S  G IG  G  S  Y +SK  + G  +    EL 
Sbjct: 114 APMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYAS--YCASKFALRGFSEALRRELA 171

Query: 187 RFGIRVNCVSPYAVSSPM 204
             G+RV  ++P A  + M
Sbjct: 172 DTGVRVLYLAPRATRTAM 189

Length = 263

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 70.2 bits (172), Expect = 9e-15
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 18/203 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDISSSSSSAN 65
           M     GK AL+TG    IG    +  +K GA+V+ ++  + DL   V E          
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVREC--------P 52

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
           G   V  D++      +A   A+   G +D++ NNA +    +P  L+  +  F+R   V
Sbjct: 53  GIEPVCVDLSDW----DATEEALGSVGPVDLLVNNAAVA-ILQP-FLEVTKEAFDRSFDV 106

Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAV 183
           N+      ++  AR M   G  GSI++ +S       +T+H  Y S+K  +  L K  A+
Sbjct: 107 NVRAVIHVSQIVARGMIARGVPGSIVNVSSQAS-QRALTNHTVYCSTKAALDMLTKVMAL 165

Query: 184 ELGRFGIRVNCVSPYAVSSPMAK 206
           ELG   IRVN V+P  V + M +
Sbjct: 166 ELGPHKIRVNSVNPTVVMTDMGR 188

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 12/201 (5%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV---CEDISSSSSS 63
           M   L G V +ITG +  IG+  A  F++ GA++++A   ++  ++V   C  + +    
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLV 60

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
                 V  DVT    ++     A S  G++D+  NN G+   A     +      E+++
Sbjct: 61  ------VPTDVTDADQVKALATQAASFGGRIDVWVNNVGV--GAVGRFEETPIEAHEQVI 112

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
             NL+G       A  + K  G G  I+  S+ G      + AY++SK G+ G  +    
Sbjct: 113 QTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRG 172

Query: 184 ELGRF-GIRVNCVSPYAVSSP 203
           EL     I V  V P  + +P
Sbjct: 173 ELADHPDIHVCDVYPAFMDTP 193

Length = 330

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 7e-14
 Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 15/207 (7%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           S    L GK AL+TGG   IG        + GA+V+          S  +D+        
Sbjct: 2   SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTT------ARSRPDDLPE------ 49

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
           G  +V  D+T  +         + + G +DI+ +  G               E++  L++
Sbjct: 50  GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNL 109

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--GGVTSHAYTSSKHGVVGLMKNTAV 183
           NL+ A    +     M   G G II   S+   +     T+  Y ++K  +    K+ + 
Sbjct: 110 NLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTA-YAAAKAALSTYSKSLSK 168

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLK 210
           E+   G+RVN VSP  + +  A    +
Sbjct: 169 EVAPKGVRVNTVSPGWIETEAAVALAE 195

Length = 260

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 68.3 bits (167), Expect = 7e-14
 Identities = 57/193 (29%), Positives = 83/193 (43%), Gaps = 12/193 (6%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
            V LITG +  IG   A  F   G +V     K        ED+ + +  A G + V  D
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKA-------EDVEALA--AAGFTAVQLD 52

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V     +        +++G LD++ NNAG    A   +LD       R    N V A +G
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAGY--GAMGPLLDGGVEAMRRQFETN-VFAVVG 109

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
              A   +    RG +++  SV GV+    + AY +SK  V  L     +EL  FG++V 
Sbjct: 110 VTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVM 169

Query: 194 CVSPYAVSSPMAK 206
            V P A++S  A 
Sbjct: 170 EVQPGAIASQFAS 182

Length = 274

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 8e-14
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 20/193 (10%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            K+A++TG +   G       +K G  V IA +++       E++ S ++  N    +  
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLV-IATMRN---PEKQENLLSQATQLNLQQNIKV 58

Query: 73  ---DVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDNDQAEFERILS 124
              DVT +  I N     + + G++D++ NNAG      V+E     ++    E+ +   
Sbjct: 59  QQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIP---VE----EYRKQFE 110

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            N+ GA   T+     M+    G II+ +S+ G +G      Y SSK+ + G  ++  +E
Sbjct: 111 TNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLE 170

Query: 185 LGRFGIRVNCVSP 197
           L  FGI V  + P
Sbjct: 171 LKPFGIDVALIEP 183

Length = 280

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 66.7 bits (163), Expect = 1e-13
 Identities = 58/202 (28%), Positives = 82/202 (40%), Gaps = 23/202 (11%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M     GK  L+ GG+  IG    R F   GA V           +  +D +   +   G
Sbjct: 1   MGA-FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFT-------YAGSKDAAERLAQETG 52

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
            + V  D         AV   V + G LDI+  NAGI        LD D  + +R+  +N
Sbjct: 53  ATAVQTDSADRD----AVIDVVRKSGALDILVVNAGIAVFGDALELDAD--DIDRLFKIN 106

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCG----VIGGVTSHAYTSSKHGVVGLMKNTA 182
           +   +  +  AAR M   GR  II   SV G    V G     AY +SK  + G+ +  A
Sbjct: 107 IHAPYHASVEAARQMPEGGR--IIIIGSVNGDRMPVAGMA---AYAASKSALQGMARGLA 161

Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
            + G  GI +N V P  + +  
Sbjct: 162 RDFGPRGITINVVQPGPIDTDA 183

Length = 237

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 9/198 (4%)

Query: 13  GKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
           G  A++TG    IG+  A   +K G   +LI+  ++ L ++V ++I            + 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKL-DAVAKEIEEKYGVETKT--IA 57

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMF--NNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            D +   DI   +   +     LDI    NN GI        L+  + E + I++VN++ 
Sbjct: 58  ADFSAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMA 114

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               T+     M    +G+I++ +S  G+I       Y++SK  +    +    E    G
Sbjct: 115 TLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 190 IRVNCVSPYAVSSPMAKG 207
           I V  + PY V++ M+K 
Sbjct: 175 IDVQSLLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 18/201 (8%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI----ADIKDDLG---ESVCEDISSS 60
              L GK   ITG +  IG   A   ++ GA ++I    A+    L     +  E+I ++
Sbjct: 1   MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA 60

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A     +  DV  E  +  AV  AV ++G +DI  NNA  ++       D     F+
Sbjct: 61  GGQA---LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLT--GTEDTPMKRFD 115

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV----IGGVTSHAYTSSKHGVVG 176
            +  +N+ G FL ++     +K +    I++ +    +        T  AYT +K+G+  
Sbjct: 116 LMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHT--AYTMAKYGMSL 173

Query: 177 LMKNTAVELGRFGIRVNCVSP 197
                A E    GI VN + P
Sbjct: 174 CTLGLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 51/199 (25%), Positives = 74/199 (37%), Gaps = 16/199 (8%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           ++GKV L+TG    IG          GA KV  A            D  S +        
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAA----------ARDPESVTDLGPRVVP 53

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DVT    +  A   A      + I+ NNAGI       +L+ D+      +  N  G
Sbjct: 54  LQLDVTDPASVAAAAEAA----SDVTILVNNAGIFRTGSL-LLEGDEDALRAEMETNYFG 108

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
                +  A V+   G G+I++  SV   +       Y++SK     L +    EL   G
Sbjct: 109 PLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQG 168

Query: 190 IRVNCVSPYAVSSPMAKGF 208
            RV  V P  + + MA G 
Sbjct: 169 TRVLGVHPGPIDTDMAAGL 187

Length = 238

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 65.3 bits (159), Expect = 6e-13
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHC 72
            +AL+TGG+  IG   A L ++ G  V +   ++    + V   I+ +   A     +  
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV---LQA 58

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAF 131
           D++ E  +             L  + NNAGI+       ++N  AE   R+LS N+ G F
Sbjct: 59  DISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQ--CTVENLTAERINRVLSTNVTGYF 116

Query: 132 LGTKHAARVM--KPAGRG-SIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELGR 187
           L  + A + M  K  G G +I++ +S    +G    +  Y +SK  +  L    ++E+  
Sbjct: 117 LCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176

Query: 188 FGIRVNCVSP 197
            GIRVNCV P
Sbjct: 177 QGIRVNCVRP 186

Length = 247

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 57/218 (26%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLI--------ADI-KDDLGESVCEDISSSSS 62
             KVALITGGA  IG   AR     G +V I        AD    +L       +   S+
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL-----NALRPGSA 59

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNA--------GIVDEAKPNILDN 114
           +A     +  D+     +   V   V+ +G+LD + NNA        G + EA+ + L  
Sbjct: 60  AA-----LQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDL-- 112

Query: 115 DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-------- 166
                    + NL   F  ++ AA  ++   RG+I++   +         HA        
Sbjct: 113 --------FASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDI---------HAERPLKGYP 154

Query: 167 -YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP 203
            Y ++K  +  L ++ A+EL    +RVN V+P A+  P
Sbjct: 155 VYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWP 191

Length = 249

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 2/126 (1%)

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DVT    I+  V  A + +G +D++ NNAG   E    I ++  AE  R   VN+ GA 
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGA--IEESPLAEMRRQFEVNVFGAV 114

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             TK     M+   RG I++  S+ G+I       Y  SK  + G+ ++ A E+  FGI 
Sbjct: 115 AMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIH 174

Query: 192 VNCVSP 197
           V  V P
Sbjct: 175 VTAVEP 180

Length = 277

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 19/200 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G   LITGG   IG   AR F + G  V+I       G    E ++ +         +
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIIT------GRRE-ERLAEAKKELPNIHTI 55

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI---VDEAKPNI-LDNDQAEFERIL--S 124
             DV   + +E      +S+Y  LDI+ NNAGI   +D   P   LD    E +  L   
Sbjct: 56  VLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGP 115

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           + L+ AFL   H    +K     +I++ +S    +    +  Y ++K  +         +
Sbjct: 116 IRLIKAFL--PH----LKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQ 169

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           L   G+ V  + P AV + +
Sbjct: 170 LKDTGVEVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 3e-12
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 17/192 (8%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            KV +ITGG+  +G+  A+ F++ GA V+I     +  E    +I            V  
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQV---LTVQM 57

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAG---IV--DEAKPNILDNDQAEFERILSVNL 127
           DV   +D++  V     ++G++D + NNA    I   ++   N        +  ++ + L
Sbjct: 58  DVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVN-------GWNSVIDIVL 110

Query: 128 VGAFLGTKHAARV-MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            G F  ++   +  ++   +G+II+  +      G       ++K GV+ + +  AVE G
Sbjct: 111 NGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWG 170

Query: 187 R-FGIRVNCVSP 197
           R +GIRVN ++P
Sbjct: 171 RKYGIRVNAIAP 182

Length = 252

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 62.5 bits (152), Expect = 7e-12
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 11/185 (5%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
           AL+ G +  IG   A   +  G  V +   + +  E + + I +    A        DVT
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVA---FPLDVT 69

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
               +++ V  A    G+++++ + AG  D     + +    +FE  + ++LVGA    +
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAG--DTYFGKLHEISTEQFESQVQIHLVGAN---R 124

Query: 136 HAARV---MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            A  V   M    RG +I   S   +       AY ++K G+  ++ N  +EL   G+R 
Sbjct: 125 LATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRA 184

Query: 193 NCVSP 197
           + V P
Sbjct: 185 SIVHP 189

Length = 274

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 20/202 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD--DLGESVCEDISSSSSSANGCS 68
           ++ K  L+TG    IG+        HGAK + A ++D       V +             
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGD-------KVV 53

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEA---KPNILDNDQAEFERILSV 125
            +  DVT  + I+ A   A      +D++ NNAG++  A   +   L+  + E +    V
Sbjct: 54  PLRLDVTDPESIKAAAAQA----KDVDVVINNAGVLKPATLLEEGALEALKQEMD----V 105

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+ G     +  A V+K  G G+I++  SV  +        Y++SK     L +    EL
Sbjct: 106 NVFGLLRLAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAEL 165

Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
              G  V  V P  + + MA G
Sbjct: 166 AAQGTLVLSVHPGPIDTRMAAG 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 18  ITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           ITG +  IG+  AR +++ GA + L+A   D L     +  ++    A   S    DV  
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDAL-----QAFAARLPKAARVSVYAADVRD 61

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGI---VDEAKPNILDNDQAEFERILSVNLVGAFLG 133
              +  A    ++ +G  D++  NAGI       +      D A F  ++  N  G  + 
Sbjct: 62  ADALAAAAADFIAAHGLPDVVIANAGISVGTLTEERE----DLAVFREVMDTNYFG-MVA 116

Query: 134 TKH---AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           T     A   M+ A RG+++  ASV GV G   + AY++SK   +  +++  VEL   G+
Sbjct: 117 TFQPFIAP--MRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGV 174

Query: 191 RVNCVSPYAVSSPM 204
           RV  ++P  + +PM
Sbjct: 175 RVVTIAPGYIRTPM 188

Length = 257

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 36/210 (17%)

Query: 20  GGAGSIGECAARLFSKHGAKVL------------IADIKDDLGESVCEDISSSSSSANGC 67
               SI    A+  ++ GA+V+            + ++  +L   V              
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADV-------------- 48

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSV 125
             +  DVT ++DI+          GK+D + ++  +  E       LD  +  F + L +
Sbjct: 49  --IPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDI 106

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCG--VIGGVTSHAYTSSKHGVVGLMKNTAV 183
           +        K A  +M   G  SI++ + +    V  G        +K  +  L +  A 
Sbjct: 107 SAYSFISLAKAAKPLMNEGG--SIVALSYIAAERVFPGYGG--MGVAKAALESLARYLAY 162

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           ELGR GIRVN +S     +    G    D 
Sbjct: 163 ELGRKGIRVNTISAGPTKTTAGSGIGGFDK 192

Length = 239

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 22/190 (11%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           +  LITG +  IG   AR     G +V  A  + +      ED+++    A G      D
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRV-FATCRKE------EDVAALE--AEGLEAFQLD 55

Query: 74  VTKEKDIENAVNTAVSQY-GKLDIMFNN-----AGIVDEAKPNILDNDQAEFERILSVNL 127
             + + I   V   +    G+LD +FNN      G V++     L   +A+FE     N 
Sbjct: 56  YAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEAL---RAQFE----ANF 108

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            G    T+    VM+  G+G I+  +S+ G++      AY +SK  + GL     +EL  
Sbjct: 109 FGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQG 168

Query: 188 FGIRVNCVSP 197
            GI V+ + P
Sbjct: 169 SGIHVSLIEP 178

Length = 277

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 35/178 (19%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDISSSSSSANGCS 68
            L GKV LITG +  IG   A   ++ GA V L+A   + L E +  +I     +  G +
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDE-LVAEI----RAKGGTA 422

Query: 69  YVH-CDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-IVDEAKPNILD--NDQAEFERILS 124
           + + CD+T    +++ V   ++++G +D + NNAG  +  +  N  D  +D   +ER ++
Sbjct: 423 HAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHD---YERTMA 479

Query: 125 VN------LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-----AYTSSK 171
           VN      L+   L        M+    G +++ +S+     GV ++     AY +SK
Sbjct: 480 VNYFGAVRLILGLLPH------MRERRFGHVVNVSSI-----GVQTNAPRFSAYVASK 526

Length = 657

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 14/128 (10%)

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNI---LDNDQAEFERILSVNLVG 129
           D+T   D   A    V      D++ NNAGI  EA   +   ++  +  FE     N+ G
Sbjct: 59  DLTDAIDRAQAAEWDV------DVLLNNAGIG-EAGAVVDIPVELVRELFE----TNVFG 107

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               T+   R M   G+G ++ T+S+ G+I G  + AY +SKH +  + +    EL  FG
Sbjct: 108 PLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFG 167

Query: 190 IRVNCVSP 197
           I+V  V+P
Sbjct: 168 IQVATVNP 175

Length = 257

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 18/194 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              GK  ++ GG   I    A+ F++ GA V +A    +  ++    +  +     G S 
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDNDQAEFERILS 124
              DV     +E A      ++G +D++ + A             N        F+ ++ 
Sbjct: 66  ---DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSAN-------GFKTVVD 115

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIIS-TASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           ++L+G F   K A  +++  G  SII  +A    V   + +H   ++K GV  L +  A+
Sbjct: 116 IDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHV-CAAKAGVDMLTRTLAL 173

Query: 184 ELGRFGIRVNCVSP 197
           E G  GIRVN + P
Sbjct: 174 EWGPEGIRVNSIVP 187

Length = 264

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 29/192 (15%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
            ++ G  G+IG   A+L S HG +V+ A                 SS          D+T
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA---------------GRSSGD-----YQVDIT 40

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
            E  I+        + G  D + + AG  + A    L +    F+R L+  L+G     +
Sbjct: 41  DEASIKA----LFEKVGHFDAIVSTAGDAEFAPLAELTDAD--FQRGLNSKLLGQINLVR 94

Query: 136 HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
           H    +     GSI  T+ +          A  +    + G ++  A+EL R GIR+N V
Sbjct: 95  HGLPYLND--GGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPR-GIRINAV 151

Query: 196 SPYAVSSPMAKG 207
           SP  V   +   
Sbjct: 152 SPGVVEESLEAY 163

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 18/198 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-----LGE--SVCEDISSSSSS 63
           L GK   ITG +  IG+  A   ++ GA V+IA    +      G   +  E+I ++   
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           A  C     D+  E  +  AV  AV ++G +DI+ NNA  +       LD     ++ ++
Sbjct: 61  ALPCI---VDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLT--GTLDTPMKRYDLMM 115

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV----IGGVTSHAYTSSKHGVVGLMK 179
            VN  G +L +K     +K +    I++ +    +        T  AYT +K+G+   + 
Sbjct: 116 GVNTRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHT--AYTMAKYGMSMCVL 173

Query: 180 NTAVELGRFGIRVNCVSP 197
             A E    GI VN + P
Sbjct: 174 GMAEEFKPGGIAVNALWP 191

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 4   ANSMSPRLQGKVALITGGAGSIG-ECAARLFSKHGAKVLIAD--IKDDLGESVCEDISSS 60
           A S   +  G V L+TGGAG IG   A  L  ++GA++++          E   + +++ 
Sbjct: 197 AASAPLK-PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAAL 255

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
            +      Y+  DVT    +   +     +YG +D + + AG++ +A   +      +FE
Sbjct: 256 EALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDA--LLAQKTAEDFE 313

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY 167
            +L+        G  + A+ +        +  +SV    GG     Y
Sbjct: 314 AVLAPK----VDGLLNLAQALADEPLDFFVLFSSVSAFFGGAGQADY 356

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 8/186 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K  LITG     G   A+     G  VL   +  +   +  +++    S       +  D
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGA--KELRRVCSDR--LRTLQLD 56

Query: 74  VTKEKDIENAVNTAVSQYGKLDI--MFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
           VTK + I+ A        G+  +  + NNAGI+       L     ++ + + VNL G  
Sbjct: 57  VTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLP-MDDYRKCMEVNLFGTV 115

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             TK    +++ A +G +++ +S+ G +      AY +SK  V     +   EL  +G++
Sbjct: 116 EVTKAFLPLLRRA-KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVK 174

Query: 192 VNCVSP 197
           V+ + P
Sbjct: 175 VSIIEP 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 35/206 (16%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA-------- 64
           GK  +ITG    IG+  AR  ++ GA+V++A          C D++    +A        
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMA----------CRDMAKCEEAAAEIRRDTL 50

Query: 65  NGCSYV-HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           N    V H D+   K I       +++  +LD++ NNAG++        D     FE   
Sbjct: 51  NHEVIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDG----FEMQF 106

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV------------TSHAYTSSK 171
            VN +G FL T     ++K +    I++ +S+    G +            T  AY  SK
Sbjct: 107 GVNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSK 166

Query: 172 HGVVGLMKNTAVELGRFGIRVNCVSP 197
              V   +  A  L   G+ VN + P
Sbjct: 167 LANVLFTRELARRLQGTGVTVNALHP 192

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 57.3 bits (139), Expect = 3e-10
 Identities = 35/195 (17%), Positives = 71/195 (36%), Gaps = 20/195 (10%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            +V L+ GG G++G    + F   G  V   D+ +             +  A+    V  
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAE-------------NEEADASIIVLD 47

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAF 131
             +  +  +  V +     GK+D +   AG    A  +       + ++ +   NL  +F
Sbjct: 48  SDSFTEQAKQVVASVARLSGKVDALICVAG--GWAGGSAKSKSFVKNWDLMWKQNLWTSF 105

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG--RFG 189
           + +  A + +   G   ++ T +   +        Y ++K  V  L ++ A E      G
Sbjct: 106 IASHLATKHLLSGGL--LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAG 163

Query: 190 IRVNCVSPYAVSSPM 204
              N + P  + +P 
Sbjct: 164 STANAILPVTLDTPA 178

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 17/196 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M  +L+G+VA++TGG+  IG     L  + GA V I    ++   S    +      A  
Sbjct: 2   MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN--DQA---EFE- 120
            +   CDV  E D+        +++G +D++ NNAG   + + +   +  D A   E E 
Sbjct: 62  LAAR-CDVLDEADVAAFAAAVEARFGGVDMLVNNAG---QGRVSTFADTTDDAWRDELEL 117

Query: 121 RILSV-NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           +  SV N   AFL       +++ +   SI+   S+  +       A ++++ G++ L+K
Sbjct: 118 KYFSVINPTRAFLP------LLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVK 171

Query: 180 NTAVELGRFGIRVNCV 195
           + A EL   G+RVN +
Sbjct: 172 SLATELAPKGVRVNSI 187

Length = 265

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 57.3 bits (138), Expect = 4e-10
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 8/195 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           ++A +TGG G IG    +   K G KV+     +    S           A G  ++  +
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN----SPRRVKWLEDQKALGFDFIASE 59

Query: 74  --VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
             V      + A +   ++ G++D++ NNAGI  +     +   + ++  ++  NL   F
Sbjct: 60  GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMT--REDWTAVIDTNLTSLF 117

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             TK     M   G G II+ +SV G  G      Y+++K G+ G   + A E+   G+ 
Sbjct: 118 NVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVT 177

Query: 192 VNCVSPYAVSSPMAK 206
           VN VSP  + + M K
Sbjct: 178 VNTVSPGYIGTDMVK 192

Length = 246

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 57.5 bits (139), Expect = 5e-10
 Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 33/209 (15%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSS---S 61
           +MS  ++GK  +I+GG   IG+     F++ G  +    +   +    + ED+       
Sbjct: 1   NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIK 60

Query: 62  SSANGCSYVHCDVTKE--KDIENAVNTAVSQYGKLDIMFNNAGIVDEA-----------K 108
           + A   + +  +  KE  K I+         + ++D   +NA I   A           K
Sbjct: 61  AKAYPLNILEPETYKELFKKIDE-------DFDRVDFFISNAIISGRAVVGGYTKFMRLK 113

Query: 109 PNILDNDQAEFERILSVNLVGAFL-GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY 167
           P  L+N        +    V AF+ G + AA+ M+  G GSIIS +S   ++       +
Sbjct: 114 PKGLNN--------IYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH 165

Query: 168 TSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
            +SK  V  ++K  A ELG   IRVN VS
Sbjct: 166 GTSKAAVETMVKYAATELGEKNIRVNAVS 194

Length = 260

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 57.0 bits (137), Expect = 5e-10
 Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 10/199 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCEDISSSSSSANGCS 68
           L+GKVAL+TG +  IG   A+  +  GA V I   + K++  E+V E I S+  SA    
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYE-IQSNGGSAFSIG 60

Query: 69  YVHCDVTKEKDIENAVNTAVSQY---GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
                +   + + ++++  +       K DI+ NNAGI   A   I +  +  F+R++SV
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA--FIEETTEQFFDRMVSV 118

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N    F   + A   ++   R  II+ +S    I      AY+ +K  +  +    A +L
Sbjct: 119 NAKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQL 176

Query: 186 GRFGIRVNCVSPYAVSSPM 204
           G  GI VN + P  + + M
Sbjct: 177 GARGITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 56.7 bits (137), Expect = 9e-10
 Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 9/190 (4%)

Query: 14  KVALITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY--V 70
            V LITG +  IG   A RL S    +  +     DL +     +  ++ +  G +   +
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKK--GRLWEAAGALAGGTLETL 58

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV   K +  AV         +D++  NAG+        L  D      +  VN+ G 
Sbjct: 59  QLDVCDSKSVAAAVERV--TERHVDVLVCNAGVGLLGPLEALSED--AMASVFDVNVFGT 114

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
               +     MK  G G I+ T+SV G+ G   +  Y +SK  + GL ++ AV+L  F +
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 191 RVNCVSPYAV 200
            ++ +    V
Sbjct: 175 HLSLIECGPV 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 12/185 (6%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K  LITG +  IG  AA    + G +VL A  K D       D++  +S   G + +  D
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPD-------DVARMNSL--GFTGILLD 53

Query: 74  VTKEKDIENAVNTAVS-QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           +   + +E A +  ++    +L  +FNNAG       + +   Q   E+  S N  G   
Sbjct: 54  LDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQ--MEQQFSTNFFGTHQ 111

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            T      M P G G I+ T+SV G+I      AY +SK+ +        +EL   GI+V
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKV 171

Query: 193 NCVSP 197
           + + P
Sbjct: 172 SLIEP 176

Length = 256

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 12/193 (6%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GKVAL+TG +  IG   A   +  GA V I   ++   ++  E I    S+      +
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK--QAADETIREIESNGGKAFLI 61

Query: 71  HCDVTK----EKDIENAVNTAVSQYG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
             D+      +K +E   N    + G  ++DI+ NNAGI  +    I +  +  F+ I++
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQG--TIENTTEEIFDEIMA 119

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           VN+   F   +    +++  GR   IS+A V   +G   S AY  SK  +  +    A  
Sbjct: 120 VNIKAPFFLIQQTLPLLRAEGRVINISSAEV--RLGFTGSIAYGLSKGALNTMTLPLAKH 177

Query: 185 LGRFGIRVNCVSP 197
           LG  GI VN + P
Sbjct: 178 LGERGITVNTIMP 190

Length = 254

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 45/221 (20%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           +V ++ G AG IG+  AR     G KVL+AD  ++  E+  + +  +       S    D
Sbjct: 3   EVVVVIG-AGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDV---STQEVD 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V+  + ++    TA +  G +  + + AG         +   QA  E IL V+L G  L 
Sbjct: 58  VSSRESVKALAATAQT-LGPVTGLVHTAG---------VSPSQASPEAILKVDLYGTALV 107

Query: 134 TKHAARVMKPAGRGSIISTAS-----------------------------VCGVIGGVTS 164
            +   +V+ P G G +I++ S                                 I   + 
Sbjct: 108 LEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIED-SL 166

Query: 165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA 205
           HAY  +K      +   AV+ G  G R+N +SP  +S+P+A
Sbjct: 167 HAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLA 207

Length = 275

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 54.5 bits (131), Expect = 5e-09
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 9/189 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK+A  T  +  IG   AR+ ++ GA V++    ++  +   E I S S+     SY+
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVD--VSYI 63

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVNLVG 129
             D+TK +D+E  V   +   G+ DI F + G     KP   ++    ++E  + + L  
Sbjct: 64  VADLTKREDLERTVK-ELKNIGEPDIFFFSTG---GPKPGYFMEMSMEDWEGAVKLLLYP 119

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNTAVELGRF 188
           A   T+     M+  G G II + SV  +   + + A ++  +  + GL++  A ELG  
Sbjct: 120 AVYLTRALVPAMERKGFGRIIYSTSV-AIKEPIPNIALSNVVRISMAGLVRTLAKELGPK 178

Query: 189 GIRVNCVSP 197
           GI VN + P
Sbjct: 179 GITVNGIMP 187

Length = 263

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK A++TGG   +G    R  ++ GA V++   + D+       I       +G   V
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-------DGVEVV 76

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+   + +       +    ++DI+ NNAG++  A P     D  E +   + N +G 
Sbjct: 77  MLDLADLESVRAFAERFLDSGRRIDILINNAGVM--ACPETRVGDGWEAQ--FATNHLGH 132

Query: 131 FLGTKHAARVMKPAGRGSIISTAS 154
           F         +       +++ +S
Sbjct: 133 FALVNLLWPALAAGAGARVVALSS 156

Length = 315

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 43/222 (19%), Positives = 74/222 (33%), Gaps = 59/222 (26%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           +ITG A  IG   A L    G  V+  D+++                    + V  D++ 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE--------------------ADVIADLST 42

Query: 77  EKDIENAVNTAVSQYGK-LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
            +    A+   +++    LD + N AG+                  +L VN  G     +
Sbjct: 43  PEGRAAAIADVLARCSGVLDGLVNCAGV----------GGTTVAGLVLKVNYFGLRALME 92

Query: 136 HAARVMKPAGRGSIISTASVCGV--------------------------IGGVTSH-AYT 168
                ++     + +  +S+ G                             G   + AY 
Sbjct: 93  ALLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYA 152

Query: 169 SSKHGV-VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
            SK  + V   +  A  L   G+RVN V+P  V +P+ + FL
Sbjct: 153 GSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFL 194

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 41/194 (21%), Positives = 68/194 (35%), Gaps = 12/194 (6%)

Query: 15  VALITGGAGSIGECAAR-LFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH-- 71
           V ++TG +  IG   A  L  +    V++      L  S             G       
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVL-----LARSEEPLQELKEELRPGLRVTTVK 55

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            D++    +E  +       G+ D++ NNAG +      I   D  E ++   +NL    
Sbjct: 56  ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSK-IEFIDLDELQKYFDLNLTSPV 114

Query: 132 LGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
             T    R  K  G + ++++ +S   V        Y SSK       +  A E     +
Sbjct: 115 CLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDV 172

Query: 191 RVNCVSPYAVSSPM 204
           RV   +P  V + M
Sbjct: 173 RVLSYAPGVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 45/192 (23%), Positives = 71/192 (36%), Gaps = 16/192 (8%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS---SSSSSANGCSYVH 71
           +AL+T      G  +A   ++ G  V            VC D S   ++   A       
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTV------------VCHDASFADAAERQAFESENPG 50

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
                E+  E  V+  +   G +D++ +N  I     P I    +A+  +      +  F
Sbjct: 51  TKALSEQKPEELVDAVLQAGGAIDVLVSNDYIPRPMNP-IDGTSEADIRQAFEALSIFPF 109

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
              + A   MK AG GSII   S         +  Y  ++   V L ++ A EL R  I 
Sbjct: 110 ALLQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNIL 169

Query: 192 VNCVSPYAVSSP 203
           V  + P   +SP
Sbjct: 170 VYAIGPNFFNSP 181

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)

Query: 93  KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIIST 152
           + D++ +NA I+D+ +   L   + E  R +  N+VG     + A  +MK    G  I  
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIE--RAIRANVVGTRRLLEAARELMKAKRLGRFILI 88

Query: 153 ASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           +SV G+ G      Y +SK  + GL +  A E    G+    V+    +   
Sbjct: 89  SSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSG 140

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 53.0 bits (127), Expect = 1e-08
 Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 30/223 (13%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
            A++TG A  IG   A    + G +V++         +       ++   N       D+
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVL-HYHRSAAAASTLAAELNARRPNSAVTCQADL 61

Query: 75  TKEKDI----ENAVNTAVSQYGKLDIMFNNAGI--------------VDEAKPNILDNDQ 116
           +    +    E  ++     +G+ D++ NNA                V + K   L+   
Sbjct: 62  SNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKS--LEVQV 119

Query: 117 AEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHA---YTSS 170
           AE   +   N +  +   K  A+         R + +S  ++C  +          YT +
Sbjct: 120 AE---LFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMA 176

Query: 171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           KH + GL ++ A+EL    IRVN V+P     P A  F   +D
Sbjct: 177 KHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQED 219

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 26/198 (13%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           L+GK  LI G A   SI    A+  ++ GA++      + L + V E+++       G  
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRV-EELAEE----LGSD 58

Query: 69  YV-HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV--DEAKPNILDNDQAEFERILSV 125
            V  CDVT ++ I+    T   ++GKLD + ++      +E K + LD  +  F   + +
Sbjct: 59  LVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDI 118

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-------IGGVTSHAYTSSKHGVVGLM 178
           +   +F     AAR +   G GSI++   +          + GV   A  +S       +
Sbjct: 119 S-AYSFTALAKAARPLMNNG-GSILTLTYLGSERVVPNYNVMGVAKAALEAS-------V 169

Query: 179 KNTAVELGRFGIRVNCVS 196
           +  A +LG+ GIRVN +S
Sbjct: 170 RYLAADLGKEGIRVNAIS 187

Length = 259

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 13/193 (6%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG--CSYVHCDV 74
           L+TG +  IG   A   +  G ++ +             +   S+  A G     +  DV
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDA----ESVVSAIQAQGGNARLLQFDV 57

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLVGAFLG 133
                    +   ++++G    +  NAGI  D A P + +    +++ ++  NL G F  
Sbjct: 58  ADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSE---EDWDIVIHTNLDG-FYN 113

Query: 134 TKHAARVMKPAGR--GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             H   +     R  G II+ ASV GV+G      Y+++K G++G  K  AVEL +  I 
Sbjct: 114 VIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKIT 173

Query: 192 VNCVSPYAVSSPM 204
           VNC++P  + + M
Sbjct: 174 VNCIAPGLIDTEM 186

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 23/195 (11%)

Query: 13  GKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           GK  LITG A   SI    A+   + GA++          E++ + +   +      + V
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTY----QPEALRKRVEKLAERLGESALV 56

Query: 71  -HCDVTKEKDIENAVNTAVSQYGKLDIMFN---NAGIVDEAKPNILDNDQAEFERILSVN 126
             CDV+ +++I+         +GKLD + +    A  V    P  LD  +  F + L ++
Sbjct: 57  LPCDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGP-FLDTSRKGFLKALDIS 115

Query: 127 LVGAFLG-TKHAARVMKPAGRGSIISTASVCGVIGG-VTSHAY---TSSKHGVVGLMKNT 181
              + +   K A  +M P G  SI++       +G       Y     +K  +   ++  
Sbjct: 116 -AYSLVSLAKAALPIMNPGG--SIVTL----SYLGSERVVPGYNVMGVAKAALESSVRYL 168

Query: 182 AVELGRFGIRVNCVS 196
           A ELGR GIRVN +S
Sbjct: 169 AYELGRKGIRVNAIS 183

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 46/201 (22%), Positives = 78/201 (38%), Gaps = 18/201 (8%)

Query: 10  RLQGKVALITGG--AGSIGECAARLFSKHGA-----------KVLIADIKDDLGESVCED 56
           +L+ KVA++TG      IG    +  ++ GA           K +   +  D    + E+
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 57  ISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ 116
           +  +       S +  D+T+    +  +N    Q G   I+ NNA        + L    
Sbjct: 63  LLKNGVK---VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLT--A 117

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
            E ++   VN+    L +   AR       G II+  S       V   AY ++K  +  
Sbjct: 118 EELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDA 177

Query: 177 LMKNTAVELGRFGIRVNCVSP 197
           L  + A E+   GI VN ++P
Sbjct: 178 LTSSLAAEVAHLGITVNAINP 198

Length = 256

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 3e-08
 Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 18/189 (9%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
           ALI G  G IG   AR  +  G ++L+             D  + +  A           
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLL----------SGRDAGALAGLAAE-VGALARPA 49

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
                E  V     + G LD++   AG +   KP +     A + RIL  NL GA L  K
Sbjct: 50  DVAA-ELEVWALAQELGPLDLLVYAAGAI-LGKP-LARTKPAAWRRILDANLTGAALVLK 106

Query: 136 HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
           HA  ++    R   +       ++ G++  AY ++K  +   ++    E+   G+R+  V
Sbjct: 107 HALALLAAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEVR--GLRLTLV 162

Query: 196 SPYAVSSPM 204
            P AV + +
Sbjct: 163 RPPAVDTGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 51.9 bits (124), Expect = 3e-08
 Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 5/198 (2%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
             L  K  L+TG +  +GE  A+ ++  GA V++        E V + I  +        
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 69  YVHCDVTKEKDIEN-AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ-AEFERILSVN 126
                  +EK+ E  A   A +  GKLD + + AG      P  LD    AE+     +N
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSP--LDFQTVAEWVNQYRIN 119

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            V     T+    ++K +   S+I      G         + +SK  +  L K  A E  
Sbjct: 120 TVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWE 179

Query: 187 RFG-IRVNCVSPYAVSSP 203
           RFG +R N + P  ++SP
Sbjct: 180 RFGNLRANVLVPGPINSP 197

Length = 239

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 3e-08
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 26/188 (13%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVL-IA--DIKDDLGESVCEDISSSSSSANGCSYV 70
           +  L+TG    IG   +   +  G +V+ IA   I D  GE    D++    +A      
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTA------ 57

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
                       A    +++   +D + NN GI   A P  L   D A  + +  +N+  
Sbjct: 58  ------------ATLAQINEIHPVDAIVNNVGI---ALPQPLGKIDLAALQDVYDLNVRA 102

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           A   T+     MK   +G I++  S   + G +   +Y+++K  +VG  +  A+EL  +G
Sbjct: 103 AVQVTQAFLEGMKLREQGRIVNICSR-AIFGALDRTSYSAAKSALVGCTRTWALELAEYG 161

Query: 190 IRVNCVSP 197
           I VN V+P
Sbjct: 162 ITVNAVAP 169

Length = 234

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.2 bits (123), Expect = 5e-08
 Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 32/207 (15%)

Query: 11  LQGKVALITGGA--GSIGECAARLFSKHGAKV-----------LIADIKDDLGESVCEDI 57
           L  K+AL+TG +    IG    R  +  G  +           +   + D     + E+I
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 58  SSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNA-----GIVDEAKPNIL 112
            S       C ++  D+++             + G   I+ NNA       ++E     L
Sbjct: 63  ESYGVR---CEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQL 119

Query: 113 DNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--VTSHAYTSS 170
           D   A   R  ++ L  AF     A +    AG G II+  S  G   G      AY ++
Sbjct: 120 DKHYAVNVRA-TMLLSSAF-----AKQYDGKAG-GRIINLTS--GQSLGPMPDELAYAAT 170

Query: 171 KHGVVGLMKNTAVELGRFGIRVNCVSP 197
           K  +    K+ A EL   GI VN V+P
Sbjct: 171 KGAIEAFTKSLAPELAEKGITVNAVNP 197

Length = 256

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 8e-08
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           P   G+VA++TG    +G   A   +  GA V++A    D G++    I++++  A+  +
Sbjct: 12  PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGAD-VT 70

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI 103
               D+T    +  A +   + Y ++D++ NNAG+
Sbjct: 71  LQELDLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 16/195 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   L GK  LITG +  IG  AA  F+  G  + +     D  E++  D+ ++      
Sbjct: 1   MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVA 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  D++  +  E     A    G +DI+ NNAG +      + D D A +     + 
Sbjct: 61  VHAL--DLSSPEAREQLAAEA----GDIDILVNNAGAIPGG--GLDDVDDAAWRAGWELK 112

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G    T+ A   MK  G G I+   +V G  G      Y     G   LM  T   LG
Sbjct: 113 VFGYIDLTRLAYPRMKARGSGVIV---NVIGAAGENPDADYICGSAGNAALMAFTRA-LG 168

Query: 187 ----RFGIRVNCVSP 197
                 G+RV  V+P
Sbjct: 169 GKSLDDGVRVVGVNP 183

Length = 259

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 4/127 (3%)

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-VDEAKPNILDNDQAEFERILSVNLVGA 130
            DVT    +   V+ A +  G++D++ +NAG  +  A   + D   A+  R +  NL+G+
Sbjct: 55  LDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSD---AQIRRQIDTNLIGS 111

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
               + A   ++  G G I+  +S  G I       Y ++K G+ G ++  A E+  FGI
Sbjct: 112 IQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGI 171

Query: 191 RVNCVSP 197
               V P
Sbjct: 172 EFTIVEP 178

Length = 276

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 23/151 (15%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVL--------IADIKDDLGESVCEDISSSSSSANG 66
           + L+TG     GEC  R F + G KV+        + ++KD+LG+++             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL------------- 48

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
                 DV     IE  + +  +++  +D++ NNAG+    +P    +   ++E ++  N
Sbjct: 49  -YIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKAS-VEDWETMIDTN 106

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCG 157
             G    T+     M     G II+  S  G
Sbjct: 107 NKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137

Length = 248

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 23/215 (10%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           +  G   LITGGA  IG   A+ F + G  V+I        E    +  + +   +    
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRN----EERLAEAKAENPEIHT--- 54

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE----AKPNILDNDQAEFERIL-- 123
             CDV         V     +Y  L+++ NNAGI          ++LD+ + E    L  
Sbjct: 55  EVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
            + L    L   H  R  +P    +II+ +S    +   ++  Y ++K  +         
Sbjct: 115 PIRLTALLL--PHLLR--QPE--ATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALRE 168

Query: 184 ELGRFGIRVNCVSPYAVSSPM----AKGFLKLDDD 214
           +L    + V  ++P  V +      A+G + L   
Sbjct: 169 QLKDTSVEVIELAPPLVDTTEGNTQARGKMPLSAF 203

Length = 245

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 34/218 (15%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           M   L+GK  ++ G A   SI    AR     GAK++     + L + V E   +     
Sbjct: 1   MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQE 60

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLD-----IMFNNAGIVDEAKPNILDNDQAEF 119
           +    + CDVT +++I     T   + G +      I F N    ++ +   L+  +  F
Sbjct: 61  S--LLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFAN---KEDLRGEFLETSRDGF 115

Query: 120 ---ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-------IGGVTSHAYTS 169
              + I + +L          A+ +   G GSI++   + G        + GV   +  +
Sbjct: 116 LLAQNISAYSLTA----VAREAKKLMTEG-GSIVTLTYLGGERVVQNYNVMGVAKASLEA 170

Query: 170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           S       +K  A +LG+ GIRVN +S   + +  AKG
Sbjct: 171 S-------VKYLANDLGKDGIRVNAISAGPIRTLSAKG 201

Length = 257

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 15/200 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+GK   I G +  +G   A    K GA+V I    +   E+  + +  + S      Y
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCI----NSRNENKLKRMKKTLSKYGNIHY 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV+  +   N +  A      +D +    G   E        + +  E +L+ ++  
Sbjct: 58  VVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVE----EFSGLEEMLTNHIKI 113

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGRF 188
                  + R +K     SI+  +S+ G+        +Y  +K G+   ++  A EL   
Sbjct: 114 PLYAVNASLRFLKEGS--SIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGR 171

Query: 189 GIRVNCVSPYAVSSPMAKGF 208
           GIRVN ++P    + ++  F
Sbjct: 172 GIRVNGIAP----TTISGDF 187

Length = 238

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 69/216 (31%)

Query: 29  AARLFSKHGAKVLIADIKD---DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN 85
            ARL    GA+V+  D ++    L   +  D+   +S                     ++
Sbjct: 1   TARLLRFLGARVIGVDRREPGMTLDGFIQADLGDPAS---------------------ID 39

Query: 86  TAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP- 143
            AV+   G++D +FN AG+     P       A  E +  VN    FLG +H    + P 
Sbjct: 40  AAVAALPGRIDALFNIAGV-----PGT-----APVELVARVN----FLGLRHLTEALLPR 85

Query: 144 -AGRGSIISTASVCG---------------------VIGGVTSHA------YTSSKHGV- 174
            A  G+I++ AS+ G                         + +H       Y  SK  + 
Sbjct: 86  MAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALI 145

Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK 210
           +  M+      G  GIRVNCV+P  V +P+   F  
Sbjct: 146 LWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRS 181

Length = 241

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 44/202 (21%), Positives = 82/202 (40%), Gaps = 21/202 (10%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           +  +ITG +  +GE  A    + G  V+ I+  ++       E    +    +  ++   
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK------ELTKLAEQYNSNLTFHSL 55

Query: 73  DVTKEKDIENAVNTAVSQYGKLDI----MFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           D+    ++E   N  +S   + ++    + NNAG+V   KP I   +  E    + +NL+
Sbjct: 56  DLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKP-IEKAESEELITNVHLNLL 114

Query: 129 GAFLGT----KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
              + T    KH     K   R   IS+ +      G +  AY SSK G+    +  A E
Sbjct: 115 APMILTSTFMKHTKD-WKVDKRVINISSGAAKNPYFGWS--AYCSSKAGLDMFTQTVATE 171

Query: 185 --LGRFGIRVNCVSPYAVSSPM 204
                + +++   SP  + + M
Sbjct: 172 QEEEEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 7/192 (3%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           LI G    I    AR ++  GA++ +A    +  E + +D+ +  + A   S    D+  
Sbjct: 5   LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVA--VSTHELDILD 62

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
                  +++        DI+    G + +      + D A   R    N  G       
Sbjct: 63  TASHAAFLDSLP---ALPDIVLIAVGTLGDQA--ACEADPALALREFRTNFEGPIALLTL 117

Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
            A   +  G G+I+  +SV G  G  +++ Y S+K  +   +      L + G+ V  V 
Sbjct: 118 LANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVK 177

Query: 197 PYAVSSPMAKGF 208
           P  V +PM  G 
Sbjct: 178 PGFVRTPMTAGL 189

Length = 243

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 44.9 bits (106), Expect = 9e-06
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 9/144 (6%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH- 71
           G+  LITG    IG+ AA   +K G  V +        E   ++I + S + N   ++H 
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQN--IFLHI 58

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-IVDEAKPNILDNDQAEFERILSVNLVGA 130
            D++  K +   V     +  KL ++ NNAG +V++ +       +   E+  + N +G 
Sbjct: 59  VDMSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELT-----EDGLEKNFATNTLGT 113

Query: 131 FLGTKHAARVMKPAGRGSIISTAS 154
           ++ T H   V++      +I+ +S
Sbjct: 114 YILTTHLIPVLEKEEDPRVITVSS 137

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 24/198 (12%)

Query: 14  KVALITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
             ALITG +  IG   A  L   H   +L+     +  + +  ++        G +    
Sbjct: 4   PTALITGASRGIGAAIARELAPTH--TLLLGGRPAERLDELAAELP-------GATPFPV 54

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+T  + I      AV Q G+LD++ +NAG+ D     + ++   E+   L VN+V    
Sbjct: 55  DLTDPEAIA----AAVEQLGRLDVLVHNAGVADLGP--VAESTVDEWRATLEVNVVAPAE 108

Query: 133 GTKH---AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            T+    A R    A  G ++   S  G+       +Y +SK  +  L      E     
Sbjct: 109 LTRLLLPALR----AAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREE-EPGN 163

Query: 190 IRVNCVSPYAVSSPMAKG 207
           +RV  V P    + M +G
Sbjct: 164 VRVTSVHPGRTDTDMQRG 181

Length = 227

>gnl|CDD|181162 PRK07904, PRK07904, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 17/197 (8%)

Query: 17  LITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDV 74
           L+ GG   IG     R      A+V++A + DD   ++    + ++ +S+     +  D 
Sbjct: 12  LLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASS--VEVIDFDA 69

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL-----VG 129
                    ++ A +  G +D+     G++ +A+   L  +Q +  +I  +N      VG
Sbjct: 70  LDTDSHPKVIDAAFAG-GDVDVAIVAFGLLGDAEE--LWQNQRKAVQIAEINYTAAVSVG 126

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
             LG K     M+  G G II+ +SV G     ++  Y S+K G+ G        L  +G
Sbjct: 127 VLLGEK-----MRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALREYG 181

Query: 190 IRVNCVSPYAVSSPMAK 206
           +RV  V P  V + M+ 
Sbjct: 182 VRVLVVRPGQVRTRMSA 198

Length = 253

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 29/208 (13%)

Query: 1   MLQANSMSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS 58
           M QA+ +   + GK  LI G A   SI    A+     GA++      D L + V     
Sbjct: 1   MAQASGL---MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRV----E 53

Query: 59  SSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQ 116
             ++        HCDVT E  I+    T   ++GKLD + +  G  D  E     +D  +
Sbjct: 54  PLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSR 113

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV--------IGGVTSHAYT 168
             F   + +++       + A ++M     GSI+ T +  G         + GV   A  
Sbjct: 114 DNFTMTMDISVYSFTAVAQRAEKLMTDG--GSIL-TLTYYGAEKVMPHYNVMGVAKAALE 170

Query: 169 SSKHGVVGLMKNTAVELGRFGIRVNCVS 196
           +S       +K  AV+LG   IRVN +S
Sbjct: 171 AS-------VKYLAVDLGPKNIRVNAIS 191

Length = 272

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           + AL+TG A  IG   A   + HG  V +  +   D  E++  +I +    A     +  
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRA---VALQA 66

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+  E ++   V  A +  G + ++ NNA + +    +     +A ++R ++ NL   F+
Sbjct: 67  DLADEAEVRALVARASAALGPITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFV 124

Query: 133 GTKHAARVMKPAGRGSII 150
             +  AR +    RG ++
Sbjct: 125 LAQAFARALPADARGLVV 142

Length = 258

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 13/120 (10%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLI----ADIKDDLGESVCEDISSSSSSANGCS--YV 70
           L+TGG G +G   AR  ++ GA+ L+    +   D   E++  ++      A G     V
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAEL-----EARGAEVTVV 58

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV+    +   +    +    L  + + AG++ +A   + +    +F R+L+  + GA
Sbjct: 59  ACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDAL--LANMTAEDFARVLAPKVTGA 116

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSY 69
           L GK AL+TG +  IG   A++ +  GA V++    K      V  +I ++   A   S 
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRA---SA 60

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNA 101
           V  D+T E+ +   ++TA  ++G LD +  NA
Sbjct: 61  VGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 34/202 (16%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLI---ADIKDDLGESVCEDISSSSSSAN 65
           LQGK  LITG A   SI    A+L  KHGA++     +++ +   + + E+I        
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI-------- 57

Query: 66  GCSYV-HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERI 122
           GC++V   DVT  K I N  +    ++G  D + +     D  E K   +D     F   
Sbjct: 58  GCNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNS 117

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV--------IGGVTSHAYTSSKHGV 174
           L ++       ++ A  +M   G    I T +  G         + GV   A  +S    
Sbjct: 118 LHISCYSLLELSRSAEALMHDGGS---IVTLTYYGAEKVIPNYNVMGVAKAALEAS---- 170

Query: 175 VGLMKNTAVELGRFGIRVNCVS 196
              +K  A ++G   IRVN +S
Sbjct: 171 ---VKYLANDMGENNIRVNAIS 189

Length = 260

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 42.2 bits (99), Expect = 8e-05
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 5/142 (3%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKV +ITG    IG   AR F+ HGA V++A        +    I      A     +  
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKAR-VEAMTL 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+   + ++       ++   L ++  NA +   A P  L  D    E    VN +G F 
Sbjct: 60  DLASLRSVQRFAEAFKAKNSPLHVLVCNAAVF--ALPWTLTEDG--LETTFQVNHLGHFY 115

Query: 133 GTKHAARVMKPAGRGSIISTAS 154
             +    V++ +    +I  +S
Sbjct: 116 LVQLLEDVLRRSAPARVIVVSS 137

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 41.3 bits (98), Expect = 9e-05
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 25/129 (19%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLI------------ADIKDDLGESVCEDISSSS 61
              LITGG G +G   AR  ++ GA+ L+            A +  +L  +         
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGAR------ 54

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
                 + V CDV     +   +    +  G L  + + AG++D+    +       F  
Sbjct: 55  -----VTVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDG--VLASLTPERFAA 107

Query: 122 ILSVNLVGA 130
           +L+    GA
Sbjct: 108 VLAPKAAGA 116

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 45/175 (25%)

Query: 17  LITGGAGSIGECAARLFSKHGAK--VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
           L+TGG G +G    RL  + G    V + D++         ++    S     +Y+  DV
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFS------PELLEDFSKLQVITYIEGDV 54

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           T ++D+  A+  +       D++ + A I+D          +A  + I+ VN+     GT
Sbjct: 55  TDKQDLRRALQGS-------DVVIHTAAIIDVFG-------KAYRDTIMKVNVK----GT 96

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGG------------------VTSHAYTSSK 171
           ++       AG   ++ T+S+  V+G                        Y  SK
Sbjct: 97  QNVLDACVKAGVRVLVYTSSM-EVVGPNSYGQPIVNGDETTPYESTHQDPYPESK 150

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 13/199 (6%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           L+T  +  IG   AR   K GA+V+I+   ++  E   +++            V  D++ 
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG----EVYAVKADLSD 59

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN----DQAEFERILSVNLVGAFL 132
           + D++N V  A    G +D +  NAG V   +P +L      D  E   +  V     +L
Sbjct: 60  KDDLKNLVKEAWELLGGIDALVWNAGNV-RCEPCMLHEAGYSDWLEAALLHLV--APGYL 116

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT-SSKHGVVGLMKNTAVELGRFGIR 191
            T      ++   +G ++  +SV  V   +        ++ G+V L K  +   G  GIR
Sbjct: 117 TTLLIQAWLEKKMKGVLVYLSSV-SVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIR 175

Query: 192 VNCVSPYAVSSPMAKGFLK 210
              V   +  +P A+  L 
Sbjct: 176 AYTVLLGSFDTPGARENLA 194

Length = 259

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 16/188 (8%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           L+ GG+  IG   AR F+  GA+V IA    D   +    +               D+T 
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL----GGGAPVRTAALDITD 56

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
           E     AV+   ++ G  D +   A   D     +     A  +  +     GA+     
Sbjct: 57  EA----AVDAFFAEAGPFDHVVITA--ADTPGGPVRALPLAAAQAAMDSKFWGAY----R 106

Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
            AR  + A  GS+   +    V    +     +    +  L +  A+EL    +RVN VS
Sbjct: 107 VARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVS 164

Query: 197 PYAVSSPM 204
           P  V +P+
Sbjct: 165 PGLVDTPL 172

Length = 230

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 39/172 (22%), Positives = 61/172 (35%), Gaps = 34/172 (19%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
            +TGG G +G    +   ++G KVL+    + LGE+  E I  +   A+    +  D+T+
Sbjct: 2   FVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAH-ERIEEAGLEADRVRVLEGDLTQ 60

Query: 77  EK---DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
                    +   A    GK+D + + A   D          QA  E     N+     G
Sbjct: 61  PNLGLSAAASRELA----GKVDHVIHCAASYDF---------QAPNEDAWRTNID----G 103

Query: 134 TKHAARVMKPAGRGSI--ISTASVCGVIGGVT-----------SHAYTSSKH 172
           T+H   +           +STA V G   G              + Y  SK 
Sbjct: 104 TEHVLELAARLDIQRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKA 155

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 25/199 (12%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLG--ESVCEDISSSSSSANG 66
           L GK AL+TG A   SI    A+     GA++ I  + D+ G  E    +++      N 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP---LNP 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERILS 124
             ++ CDV  +  IE    T   ++GKLDI+ +        E   +     +  F R L 
Sbjct: 61  SLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALE 120

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-------IGGVTSHAYTSSKHGVVGL 177
           ++        K A  +M     GSI++   + GV       + GV   A  +S       
Sbjct: 121 ISAYSLAPLCKAAKPLMSEG--GSIVTLTYLGGVRAIPNYNVMGVAKAALEAS------- 171

Query: 178 MKNTAVELGRFGIRVNCVS 196
           ++  A ELG   IRVN +S
Sbjct: 172 VRYLAAELGPKNIRVNAIS 190

Length = 258

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI 42
           +   L GK  L+TGG GSIG    R   K   K +I
Sbjct: 244 IGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEII 279

Length = 588

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 16/31 (51%), Positives = 18/31 (58%)

Query: 14 KVALITGGAGSIGECAARLFSKHGAKVLIAD 44
             LITGGAG IG   AR F K G +V+  D
Sbjct: 1  MRVLITGGAGFIGSNLARFFLKQGWEVIGFD 31

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 32/208 (15%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           MS  L GK  ++ G A   SI    A+     GA V+     D + +S+ + +       
Sbjct: 1   MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDL-- 58

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE---AKPNILDNDQAEFER 121
                V CDV  ++ IE A  T   + GK+D      GIV     AK   L  +  +  R
Sbjct: 59  ----LVECDVASDESIERAFATIKERVGKID------GIVHAIAYAKKEELGGNVTDTSR 108

Query: 122 --------ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKH 172
                   I + +L+      K+A  ++ P   G+ I T +  G    + ++     +K 
Sbjct: 109 DGYALAQDISAYSLIAV---AKYARPLLNP---GASIVTLTYFGSERAIPNYNVMGIAKA 162

Query: 173 GVVGLMKNTAVELGRFGIRVNCVSPYAV 200
            +   ++  A +LG+ GIRVN +S  AV
Sbjct: 163 ALESSVRYLARDLGKKGIRVNAISAGAV 190

Length = 252

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 8/194 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           +  LITG +  +G   AR F+  G  + +   + D  E +  ++ +        +    D
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIK-VAVAALD 61

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI-LSVNLVGAFL 132
           V     +         + G LD +  NAGI    K   L   +    +     N V A  
Sbjct: 62  VNDHDQVFEVFAEFRDELGGLDRVIVNAGI---GKGARLGTGKFWANKATAETNFVAALA 118

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIG--GVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
             + A  + +  G G ++  +SV  V G  GV + AY +SK GV  L +    EL +  I
Sbjct: 119 QCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKA-AYAASKAGVASLGEGLRAELAKTPI 177

Query: 191 RVNCVSPYAVSSPM 204
           +V+ + P  + S M
Sbjct: 178 KVSTIEPGYIRSEM 191

Length = 248

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 39.2 bits (91), Expect = 8e-04
 Identities = 31/152 (20%), Positives = 46/152 (30%), Gaps = 25/152 (16%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           L+TGGAG IG          G  V   D   D                +G  +V  D+T 
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD----------GLDPLLSGVEFVVLDLTD 53

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
              ++             D + + A       P+   +D AEF  +          GT +
Sbjct: 54  RDLVDELAKGVP------DAVIHLAAQSSV--PDSNASDPAEFLDV-------NVDGTLN 98

Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYT 168
                + AG    +  +SV  V G        
Sbjct: 99  LLEAARAAGVKRFVFASSVSVVYGDPPPLPID 130

Length = 314

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.8 bits (90), Expect = 9e-04
 Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 10/202 (4%)

Query: 11  LQGKVALITG--GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           LQGK  LITG     SI    A+   + GA++    + D L E V +  +   S      
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSEL---- 59

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV--DEAKPNILDNDQAEFERILSVN 126
              CDV  + +I          +  LD + ++ G    +    + LD+   E        
Sbjct: 60  VFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEI 119

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNTAVEL 185
              +      AAR M   GR S I   S  G +  + ++     +K  +   ++ TA  L
Sbjct: 120 SAYSLPALAKAARPMM-RGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACL 178

Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
           G+ GIR N +S   + +  A G
Sbjct: 179 GKEGIRCNGISAGPIKTLAASG 200

Length = 261

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 17/30 (56%), Positives = 18/30 (60%)

Query: 13 GKVALITGGAGSIGECAARLFSKHGAKVLI 42
          GK  L+TGGAGSIG    R   K G K LI
Sbjct: 2  GKTILVTGGAGSIGSELVRQILKFGPKKLI 31

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 6/96 (6%)

Query: 14  KVALITGGAGSIG-ECAARLFS----KHGAKVLIADIKDDLGESVCEDISSSSSSAN-GC 67
           KV L+TG    +G     RL +         +++A       E+ C  + +S   A    
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI 103
            YV  D++    +  A      +Y +LD ++ NAGI
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGI 97

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 14/190 (7%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
             LITG    IG+  A  ++K G +V    I     +SV +++ + S++    ++   DV
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQV----IACGRNQSVLDELHTQSANIFTLAF---DV 55

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
           T     + A++         ++   NAG  +      +D       R+ +VN++G     
Sbjct: 56  TDHPGTKAALSQLPFI---PELWIFNAGDCEYMDDGKVD--ATLMARVFNVNVLGVANCI 110

Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
           +     +    R  I+   S+   +    + AY +SK  V    +   ++L   GI V  
Sbjct: 111 EGIQPHLSCGHRVVIV--GSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVT 168

Query: 195 VSPYAVSSPM 204
           V P  V++P+
Sbjct: 169 VFPGFVATPL 178

Length = 240

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 13/128 (10%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED---ISSSSSSA 64
           +P       LITGG G +G   AR  +  GA+ L+      L            ++   A
Sbjct: 145 APGGLDGTYLITGGLGGLGLLVARWLAARGARHLVL-----LSRRGPAPRAAARAALLRA 199

Query: 65  NGC--SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
            G   S V CDVT    +   +   ++  G L  + + AG++ +A   + +   A F  +
Sbjct: 200 GGARVSVVRCDVTDPAALAALL-AELAAGGPLAGVIHAAGVLRDA--LLAELTPAAFAAV 256

Query: 123 LSVNLVGA 130
           L+  + GA
Sbjct: 257 LAAKVAGA 264

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 36/207 (17%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           M   +QGK  LI G A   SI    A+  +  GA++      + LG+ V        + +
Sbjct: 1   MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-----KPLAES 55

Query: 65  NGCSYV-HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFER 121
            G  +V  CDV     ++        ++GKLD + +  G  D  E K    D  +  F R
Sbjct: 56  LGSDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSR 115

Query: 122 ILSVNLVGAFLGT---KHAARVMKPAGR-------GS--IISTASVCGVIGGVTSHAYTS 169
            +   ++  F  T   K AA++M   G        GS  ++   +V GV           
Sbjct: 116 TM---VISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGV----------- 161

Query: 170 SKHGVVGLMKNTAVELGRFGIRVNCVS 196
           +K  +   ++  A + G  GIRVN +S
Sbjct: 162 AKAALEASVRYLAADYGPQGIRVNAIS 188

Length = 271

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 5/123 (4%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHC 72
              +ITG +  +G  AA+  ++ G   ++   +D L  E   +++     S    S +HC
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDS---YSVLHC 58

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+     +   V+        LD +  NA +               FE  + VN +G FL
Sbjct: 59  DLASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADG-FELTVGVNHLGHFL 117

Query: 133 GTK 135
            T 
Sbjct: 118 LTN 120

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09291	257	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK08017	256	oxidoreductase; Provisional	99.98
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.95
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.94
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.92
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.9
PRK06720	169	hypothetical protein; Provisional	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
PLN00198	338	anthocyanidin reductase; Provisional	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02650	351	dihydroflavonol-4-reductase	99.84
PLN02572	442	UDP-sulfoquinovose synthase	99.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.83
PLN02214	342	cinnamoyl-CoA reductase	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.82
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.81
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.78
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.77
PLN02686	367	cinnamoyl-CoA reductase	99.76
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.76
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.75
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.74
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.73
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.72
PLN02427	386	UDP-apiose/xylose synthase	99.72
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.72
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.69
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.69
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.68
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.67
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.66
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
PLN02260	668	probable rhamnose biosynthetic enzyme	99.65
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.64
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.64
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.64
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.63
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.62
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.6
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.59
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.59
PLN02206	442	UDP-glucuronate decarboxylase	99.58
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.58
PLN02996	491	fatty acyl-CoA reductase	99.56
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.56
CHL00194	317	ycf39 Ycf39; Provisional	99.55
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.54
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.53
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.53
PRK07201	657	short chain dehydrogenase; Provisional	99.47
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.45
PRK05865	854	hypothetical protein; Provisional	99.44
PLN02778	298	3,5-epimerase/4-reductase	99.39
PLN02503	605	fatty acyl-CoA reductase 2	99.38
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.37
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.37
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.36
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.34
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.31
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.31
PRK08309	177	short chain dehydrogenase; Provisional	99.28
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.26
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.25
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.23
PLN02260	668	probable rhamnose biosynthetic enzyme	99.22
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.13
PLN00016	378	RNA-binding protein; Provisional	99.08
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.06
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.05
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	99.01
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.99
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.94
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.94
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.94
PRK12320	699	hypothetical protein; Provisional	98.93
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.93
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.88
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.78
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.76
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.7
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.69
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.63
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.59
COG2910	211	Putative NADH-flavin reductase [General function p	98.58
PTZ00325	321	malate dehydrogenase; Provisional	98.52
PLN00106	323	malate dehydrogenase	98.51
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.5
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.47
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.47
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.41
PRK09620	229	hypothetical protein; Provisional	98.39
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.33
PRK14982	340	acyl-ACP reductase; Provisional	98.2
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.19
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.16
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.12
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.09
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.06
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.02
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.96
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.96
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.94
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.91
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.85
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.83
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.81
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.79
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.73
PRK06849	389	hypothetical protein; Provisional	97.7
PRK05086	312	malate dehydrogenase; Provisional	97.69
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.69
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.67
KOG2774	366	consensus NAD dependent epimerase [General functio	97.67
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.65
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.61
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.57
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.57
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.56
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.56
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.55
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.55
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.54
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.48
COG3268	382	Uncharacterized conserved protein [Function unknow	97.48
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.45
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.45
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.39
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.34
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.33
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.33
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.32
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.31
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.29
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.28
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.27
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.24
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.21
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.2
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.19
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.18
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.18
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.17
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.16
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.15
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.14
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.14
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.12
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.11
PRK09496	453	trkA potassium transporter peripheral membrane com	97.11
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.1
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.1
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.07
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.07
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.06
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.05
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.04
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.01
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.0
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.0
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.99
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.99
PLN00203	519	glutamyl-tRNA reductase	96.97
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.96
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.96
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.96
PRK05442	326	malate dehydrogenase; Provisional	96.94
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.93
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.93
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.93
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.92
PRK14968	188	putative methyltransferase; Provisional	96.91
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.91
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.9
PRK04148	134	hypothetical protein; Provisional	96.87
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.87
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.86
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.82
PTZ00117	319	malate dehydrogenase; Provisional	96.79
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.76
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.76
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.76
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.74
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.73
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.72
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.72
PRK08655	437	prephenate dehydrogenase; Provisional	96.7
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.7
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.68
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.68
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.67
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.66
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.65
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.64
PLN02602	350	lactate dehydrogenase	96.64
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.6
PLN02928	347	oxidoreductase family protein	96.56
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.54
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.54
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.53
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.52
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.49
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.47
PRK08223	287	hypothetical protein; Validated	96.46
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.44
PRK09496	453	trkA potassium transporter peripheral membrane com	96.42
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.4
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.38
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.35
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.33
PLN02494	477	adenosylhomocysteinase	96.32
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.31
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.3
PRK08328	231	hypothetical protein; Provisional	96.3
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.26
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.26
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.24
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.23
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.22
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.21
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.18
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.17
PLN02740	381	Alcohol dehydrogenase-like	96.16
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.15
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.15
PRK07877	722	hypothetical protein; Provisional	96.15
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.12
PRK06223	307	malate dehydrogenase; Reviewed	96.12
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	96.11
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.09
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.07
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.06
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.04
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.03
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.02
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.02
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.02
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.96
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.96
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.95
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.95
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.94
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.91
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.91
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.91
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.89
PRK12480	330	D-lactate dehydrogenase; Provisional	95.88
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.88
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.83
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.79
PRK14851	679	hypothetical protein; Provisional	95.78
PTZ00354	334	alcohol dehydrogenase; Provisional	95.76
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.74
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.71
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.71
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.67
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.66
PRK13243	333	glyoxylate reductase; Reviewed	95.66
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.65
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.64
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.64
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.61
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.6
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.58
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.54
PRK07411	390	hypothetical protein; Validated	95.54
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.53
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.52
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.51
PLN02827	378	Alcohol dehydrogenase-like	95.48
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.48
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.48
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.48
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.47
PLN03139	386	formate dehydrogenase; Provisional	95.43
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.41
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.4
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.35
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.35

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4e-47  Score=298.02  Aligned_cols=198  Identities=30%  Similarity=0.426  Sum_probs=182.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+.||+|+|||||+|||.++|.+|+++|++++++.|+.++++.+.+++++..... ++..++||++|.+++.++++++.
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999988887766554 69999999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++||++|+||||||...  .....+.+.+++...|++|++|++.+++.++|+|++++.|+||++||.+|..+.|....|+
T Consensus        87 ~~fg~vDvLVNNAG~~~--~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISL--VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HhcCCCCEEEecCcccc--ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            99999999999999986  3456778889999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCC--cEEEEEeCCcccCccccccCC
Q 044923          169 SSKHGVVGLMKNTAVELGRFG--IRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +||+|+++|+++|+.|+.+.+  |++ .|+||+|+|++....+.
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~  207 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELL  207 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhc
Confidence            999999999999999999977  556 99999999997665443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.2e-47  Score=295.31  Aligned_cols=193  Identities=23%  Similarity=0.350  Sum_probs=184.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+.+|++||||||+|||.++|+.|+++|++|++++|+.++++++.++++...+  ..+.++++|+++++++.++.+++.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~--v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG--VEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC--ceEEEEECcCCChhHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999999998764  4689999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +++.||+||||||+....  ++.+.++++.++++++|+.+.+.+++.++|.|.+++.|.||+++|.++..|.|..+.|++
T Consensus        81 ~~~~IdvLVNNAG~g~~g--~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~A  158 (265)
T COG0300          81 RGGPIDVLVNNAGFGTFG--PFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSA  158 (265)
T ss_pred             cCCcccEEEECCCcCCcc--chhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHH
Confidence            999999999999998654  689999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ||+++.+|+++|+.|+.++||+|.+|+||++.|+++.
T Consensus       159 TKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         159 TKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            9999999999999999999999999999999999986

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.1e-46  Score=284.55  Aligned_cols=190  Identities=30%  Similarity=0.460  Sum_probs=179.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|+++|||||||||.++|++|+++|++|++++|+.++++++.+++.+     ..+..+..|++|.++++.+++.+.+
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-----~~~~~~~~DVtD~~~~~~~i~~~~~   77 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-----GAALALALDVTDRAAVEAAIEALPE   77 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-----CceEEEeeccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999998875     2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +|+++|+||||||....  .++.+.+.++|++++++|+.|.++.+++++|.|.+++.|.||++||.++..++|+...||+
T Consensus        78 ~~g~iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~A  155 (246)
T COG4221          78 EFGRIDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGA  155 (246)
T ss_pred             hhCcccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchh
Confidence            99999999999999854  5789999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|+++..|++.|+.|+..++|||..|+||.+.|....
T Consensus       156 TK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s  192 (246)
T COG4221         156 TKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFS  192 (246)
T ss_pred             hHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecc
Confidence            9999999999999999999999999999999765433

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-42  Score=275.97  Aligned_cols=194  Identities=26%  Similarity=0.323  Sum_probs=175.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN--VDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEecCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999998877777766654322  357889999999999999999985


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                       ++|++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.+.+..|+
T Consensus        82 -~~g~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~  158 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSN  158 (263)
T ss_pred             -hhCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhH
Confidence             58999999999997643  357788999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|+|+++|+++++.|++++||+||+|+||+++|++...
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (263)
T PRK08339        159 VVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ  197 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence            999999999999999999999999999999999998643

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-42  Score=272.11  Aligned_cols=193  Identities=23%  Similarity=0.282  Sum_probs=169.5

Q ss_pred             CCCccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         7 ~~~~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      |+..++||+++||||+  +|||+++|++|+++|++|++++|+. ..++..+++..     ..+.+++||++|++++++++
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~   74 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-----EEDLLVECDVASDESIERAF   74 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-----CceeEEeCCCCCHHHHHHHH
Confidence            5566899999999999  8999999999999999999999873 33333333321     24678999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV  162 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  162 (214)
                      +++.+++|++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.+++.++|+|.+  .|+||++||.++..+.+
T Consensus        75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~  152 (252)
T PRK06079         75 ATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIP  152 (252)
T ss_pred             HHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCC
Confidence            99999999999999999986431  245778899999999999999999999999999975  48999999999998999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+.+|+++|+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        153 NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence            999999999999999999999999999999999999999998644

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=6.3e-43  Score=255.04  Aligned_cols=196  Identities=36%  Similarity=0.576  Sum_probs=179.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+..|.++||||++|||++|++.|+++|++|++.+++....+++...+....    .+..+.||+++.++++..+++..
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~----~h~aF~~DVS~a~~v~~~l~e~~   85 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG----DHSAFSCDVSKAHDVQNTLEEME   85 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC----ccceeeeccCcHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999888888888876542    46789999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhh--ccCCCCeEEEecCCCcccCCCCCcc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVM--KPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+|++++|+||||+....  .+..+..++|+..+.+|+.|.|+++|++.+.|  .+++.++||++||+.+..++-++.-
T Consensus        86 k~~g~psvlVncAGItrD~--~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtn  163 (256)
T KOG1200|consen   86 KSLGTPSVLVNCAGITRDG--LLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTN  163 (256)
T ss_pred             HhcCCCcEEEEcCcccccc--ceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchh
Confidence            9999999999999998543  57788999999999999999999999999984  4444559999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      |+++|+++.+|+|+.++|++++|||||.|+||++.|||++.+.+
T Consensus       164 YAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~  207 (256)
T KOG1200|consen  164 YAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP  207 (256)
T ss_pred             hhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH
Confidence            99999999999999999999999999999999999999988754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.2e-42  Score=266.29  Aligned_cols=193  Identities=31%  Similarity=0.528  Sum_probs=181.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+.+|++||||||++|||+++|++||++|+.+++.+.+.+..+++.++++.. +   ++..+.||++|.+++.+..++++
T Consensus        34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g---~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G---EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C---ceeEEEecCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998865 2   68999999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||+....  ++.+.+.+++++++++|+.|++..+++|+|.|.+.+.|+||.++|.+|..+.++...||
T Consensus       110 ~e~G~V~ILVNNAGI~~~~--~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Yc  187 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGK--KLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYC  187 (300)
T ss_pred             HhcCCceEEEeccccccCC--CccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhh
Confidence            9999999999999998643  57889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHH---ccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVEL---GRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~---~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|+.+|.+++..|+   ..+||+...|+|+.++|+|...
T Consensus       188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999997   4567999999999999999874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.8e-42  Score=272.39  Aligned_cols=191  Identities=24%  Similarity=0.311  Sum_probs=165.7

Q ss_pred             ccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++|++|||||++  |||+++|++|+++|++|++.+|+.+..+.. +++....+   ....+++|++|+++++++++++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~g---~~~~~~~Dv~d~~~v~~~~~~~   79 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESLG---SDFVLPCDVEDIASVDAVFEAL   79 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHhcC---CceEEeCCCCCHHHHHHHHHHH
Confidence            47899999999997  999999999999999999999875433332 23322211   1346899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+++|++|+||||||.....  ..++.+.+.++|++.+++|+.+++.++++++|+|.+  +|+||++||.++..+.|.+.
T Consensus        80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~  157 (271)
T PRK06505         80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYN  157 (271)
T ss_pred             HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccc
Confidence            99999999999999986421  135678899999999999999999999999999974  48999999999998999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|+++|+|+.+|+|+++.|++++||+||+|+||+++|++..
T Consensus       158 ~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        158 VMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA  198 (271)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence            99999999999999999999999999999999999999854

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-41  Score=272.34  Aligned_cols=191  Identities=19%  Similarity=0.279  Sum_probs=165.2

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+  .. .++++|++|+++++++++++
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~--~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG--SD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC--Cc-eEEEecCCCHHHHHHHHHHH
Confidence            4679999999997  89999999999999999999998853 2222233322211  12 56899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+++|++|+||||||...+.  ..++.+.+.++|+++|++|+.+++.+++.++|+|.++  |+||++||.++..+.|.+.
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~  155 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYVPHYN  155 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCCCcch
Confidence            99999999999999986421  2457788999999999999999999999999999763  7899999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|++||+|+.+|+++++.|++++||+||+|+||+++|++..
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS  196 (274)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh
Confidence            99999999999999999999999999999999999998754

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.1e-41  Score=268.62  Aligned_cols=195  Identities=39%  Similarity=0.585  Sum_probs=178.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+.||++||||+++|||+++|++|++.|++|++++|+++.+++..+.+........++..+.||+++++++.+++++..
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999888887655444578999999999999999999999


Q ss_pred             HH-cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhH-HHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC-c
Q 044923           89 SQ-YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG-AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS-H  165 (214)
Q Consensus        89 ~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~  165 (214)
                      ++ +|++|++|||||...+.. ++.+.+.++|++++++|+.| .+.+.+.+.|++++++.|.|+++||..+..+.+.. .
T Consensus        84 ~~~~GkidiLvnnag~~~~~~-~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTG-SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCC-ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence            98 699999999999986543 68999999999999999994 77777888888888889999999999999887666 7


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +|+++|+|+++|+|+++.|++++|||||+|+||.+.|++
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            999999999999999999999999999999999999998

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.6e-41  Score=266.11  Aligned_cols=191  Identities=21%  Similarity=0.285  Sum_probs=166.4

Q ss_pred             CccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcc---hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHH
Q 044923            9 PRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDL---GESVCEDISSSSSSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus         9 ~~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+...   ++++.+++.     ..++.++++|++|+++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~   77 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-----GQESLLLPCDVTSDEEITAC   77 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-----CCceEEEecCCCCHHHHHHH
Confidence            45789999999997  899999999999999999999876432   233322221     13577889999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG  161 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  161 (214)
                      ++++.+++|++|++|||||....  ...++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.
T Consensus        78 ~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~  155 (257)
T PRK08594         78 FETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVV  155 (257)
T ss_pred             HHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCC
Confidence            99999999999999999998642  1245678899999999999999999999999999975  4899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +.+.+|++||+|+++|+++++.|++++||+||+|+||+++|++.+
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  200 (257)
T PRK08594        156 QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK  200 (257)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHh
Confidence            999999999999999999999999999999999999999999754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.4e-41  Score=271.74  Aligned_cols=198  Identities=19%  Similarity=0.225  Sum_probs=168.2

Q ss_pred             CCCccCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC---------C-CCCCceEEEeeC
Q 044923            7 MSPRLQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS---------S-SANGCSYVHCDV   74 (214)
Q Consensus         7 ~~~~~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~---------~-~~~~v~~~~~D~   74 (214)
                      +..+++||++|||||  ++|||+++|+.|+++|++|++ +|+.+.++.+...+....         + .......+++|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            345689999999999  899999999999999999998 788777777766554210         0 001245788898


Q ss_pred             --CC------------------HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHH
Q 044923           75 --TK------------------EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT  134 (214)
Q Consensus        75 --~~------------------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  134 (214)
                        ++                  +++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              43                  3489999999999999999999999865332346788999999999999999999999


Q ss_pred             HHHHHhhccCCCCeEEEecCCCcccCCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCccccc
Q 044923          135 KHAARVMKPAGRGSIISTASVCGVIGGVTS-HAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       135 ~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +.++|+|.++  |+||++||..+..+.|.+ ..|++||+|+++|+++++.|+++ +||+||+|+||+++|++...
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence            9999999764  899999999998888865 48999999999999999999986 79999999999999999764

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-41  Score=266.36  Aligned_cols=197  Identities=33%  Similarity=0.500  Sum_probs=177.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..... ..++.++++|++|++++.++++++.
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVA-GARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccC-CceEEEEEccCCCHHHHHHHHHHHH
Confidence            347899999999999999999999999999999999998888777777754211 2357889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||||.....  +..+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+..+.+...+|+
T Consensus        82 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFA--DPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYP  159 (260)
T ss_pred             HHhCCCcEEEECCCcCCCC--ChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHH
Confidence            9999999999999976432  35677899999999999999999999999999888789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|+|++.|+++++.|++++||+||+|+||+++|++...+
T Consensus       160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~  199 (260)
T PRK07063        160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW  199 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh
Confidence            9999999999999999999999999999999999987654

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-41  Score=266.12  Aligned_cols=198  Identities=23%  Similarity=0.337  Sum_probs=178.9

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |..+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++....+. .++.++++|++|++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG-ARLLAARCDVLDEADVAAFAAA   80 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEEecCCCHHHHHHHHHH
Confidence            345689999999999999999999999999999999999988887777766544321 2577899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.+|++|+||||||....  .++.+.+.++|.+.+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....
T Consensus        81 ~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  158 (265)
T PRK07062         81 VEARFGGVDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVA  158 (265)
T ss_pred             HHHhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchH
Confidence            99999999999999998643  3567889999999999999999999999999999888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|+++.+|+++++.|+.++||+||+|+||+++|+++..
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  199 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRR  199 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence            99999999999999999999999999999999999998653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=264.89  Aligned_cols=190  Identities=24%  Similarity=0.285  Sum_probs=164.9

Q ss_pred             cCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++||++|||||++  |||+++|++|+++|++|++.+|+. ..++..+++....+   ...++++|++|+++++++++++.
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g---~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG---CNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC---CceEEEccCCCHHHHHHHHHHHH
Confidence            6789999999998  999999999999999999998874 33333444433222   12457899999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           89 SQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +++|++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.+++.+.|+|.+  +|+||++||..+..+.|.+..
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~  159 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNV  159 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccc
Confidence            9999999999999975421  235678899999999999999999999999999964  489999999999888999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus       160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASS  199 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh
Confidence            9999999999999999999999999999999999999854

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1e-40  Score=263.79  Aligned_cols=192  Identities=28%  Similarity=0.507  Sum_probs=169.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+..  +...+.+....   .++.++++|++|+++++++++++.+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALG---RKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999887642  33333343322   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+....|+
T Consensus        80 ~~g~iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~  157 (251)
T PRK12481         80 VMGHIDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYT  157 (251)
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchH
Confidence            99999999999998653  3567889999999999999999999999999997764 58999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|+++|+++++.|++++||+||+|+||+++|++...+
T Consensus       158 asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~  197 (251)
T PRK12481        158 ASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL  197 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc
Confidence            9999999999999999999999999999999999987643

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=270.29  Aligned_cols=195  Identities=21%  Similarity=0.216  Sum_probs=166.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC----------cchhhHHHHhhccCCCCCCceEEEeeCCCHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD----------DLGESVCEDISSSSSSANGCSYVHCDVTKEK   78 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~----------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   78 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.          +.++++.+.+....   .++.+++||++|++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~   80 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAG---GRGIAVQVDHLVPE   80 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcC---CceEEEEcCCCCHH
Confidence            457899999999999999999999999999999999974          33444445554322   24678899999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCC-cccC--CCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCC
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNA-GIVD--EAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASV  155 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~  155 (214)
                      +++++++++.+.+|++|++|||| |...  +...++.+.+.++|.+.+++|+.+++.++++++|+|.+++.|+||++||.
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~  160 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence            99999999999999999999999 7531  11235677889999999999999999999999999988777999999997


Q ss_pred             Cccc---CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          156 CGVI---GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       156 ~~~~---~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .+..   +.+....|++||+|+.+|+++++.|+++.||+||+|+||+++|++..
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML  214 (305)
T ss_pred             cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence            6543   33456789999999999999999999999999999999999999854

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=264.24  Aligned_cols=192  Identities=22%  Similarity=0.303  Sum_probs=166.1

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+..+.+ +++.....   .+.+++||++|+++++++++++
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~-~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYV-EPLAEELD---APIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHHHhhc---cceEEecCcCCHHHHHHHHHHH
Confidence            4789999999998  5999999999999999999999986432222 22222111   2457899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+++|++|++|||||...+.  ..++.+.+.++|++++++|+.+++++++.++|+|++  .|+||++||..+..+.+.+.
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~  160 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYN  160 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccch
Confidence            99999999999999986421  235678899999999999999999999999999964  47899999999988889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|+++|+|+.+|+++++.|++++||+||+|+||+++|++.+.
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG  202 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence            999999999999999999999999999999999999998654

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-40  Score=265.75  Aligned_cols=193  Identities=33%  Similarity=0.568  Sum_probs=173.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||+++|+.|+++|++|++++|+ +.+++..+++....   .++.++.+|++|++++.++++++.+
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG---GKAKAYHVDISDEQQVKDFASEIKE   78 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC---CeEEEEEeecCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999998 66666666665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||...+. .++.+.+.++|++++++|+.+++.+++.++|+|++++ |+||++||..+..+.+...+|++
T Consensus        79 ~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  156 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAA-GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNA  156 (272)
T ss_pred             HcCCcCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHH
Confidence            999999999999986432 3467788999999999999999999999999998765 89999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+|++.|+++++.|+.++||+||+|+||+++|++.+..
T Consensus       157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  195 (272)
T PRK08589        157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL  195 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh
Confidence            999999999999999999999999999999999987643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=264.49  Aligned_cols=192  Identities=21%  Similarity=0.246  Sum_probs=164.6

Q ss_pred             cCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++||++|||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+   ....++||++|+++++++++++.
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD---SELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC---CceEEECCCCCHHHHHHHHHHHH
Confidence            78999999997  67999999999999999999988764 33333344432222   24578999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCC--CC-CCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           89 SQYGKLDIMFNNAGIVDEAK--PN-ILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      +++|++|++|||||...+..  .+ +.+.+.++|+..+++|+.+++.+++.+.|.|+++ +|+||++||..+..+.|++.
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~  158 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYN  158 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcc
Confidence            99999999999999864321  11 3467888999999999999999999999999755 48999999999998999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|+++|+|+.+|+++++.|++++||+||+|+||+++|++...
T Consensus       159 ~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        159 VMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG  200 (261)
T ss_pred             cchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence            999999999999999999999999999999999999998654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.4e-40  Score=264.03  Aligned_cols=193  Identities=25%  Similarity=0.317  Sum_probs=167.3

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCc--chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDD--LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+...   .+.++++|++|+++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN---PSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC---cceEeecCcCCHHHHHHHHH
Confidence            4689999999986  89999999999999999998876543  23344444433221   35678999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      ++.+++|++|+||||||....  ...++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.|.
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~  157 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPN  157 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcc
Confidence            999999999999999997642  1245778899999999999999999999999999975  489999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +..|+++|+|+.+|+++++.|++++||+||+|+||+++|++...
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~  201 (258)
T PRK07370        158 YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA  201 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc
Confidence            99999999999999999999999999999999999999998643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-40  Score=263.06  Aligned_cols=190  Identities=17%  Similarity=0.221  Sum_probs=164.1

Q ss_pred             cCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++||++|||||++  |||+++|++|+++|++|++++|+. +.++..+++....+   .+.++.||++|+++++++++++.
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~   79 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG---SDIVLPCDVAEDASIDAMFAELG   79 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccC---CceEeecCCCCHHHHHHHHHHHH
Confidence            7899999999986  999999999999999999998873 44444455543322   35678999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCC---CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           89 SQYGKLDIMFNNAGIVDEAK---PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      +++|++|++|||||......   ..+.+.+.++|++.+++|+.+++.+++.+.|.+++  +|+||++||.++..+.+.+.
T Consensus        80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~  157 (262)
T PRK07984         80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYN  157 (262)
T ss_pred             hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcc
Confidence            99999999999999864321   12456788999999999999999999999997754  47899999999988899999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        158 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  198 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence            99999999999999999999999999999999999998754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-40  Score=263.62  Aligned_cols=200  Identities=23%  Similarity=0.324  Sum_probs=174.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |..++++|++|||||++|||+++|++|+++|++|++++| +.+.++...+++....+  .++.++++|++|+++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~   79 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG--IKAKAYPLNILEPETYKELFK   79 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHH
Confidence            345688999999999999999999999999999988865 44555555555543222  357899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCC----CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDE----AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG  161 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  161 (214)
                      ++.+.++++|++|||||..++    ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.
T Consensus        80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (260)
T PRK08416         80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI  159 (260)
T ss_pred             HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC
Confidence            999999999999999997532    1234667788999999999999999999999999998878899999999988889


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +.+..|++||+|++.|+++++.|+.++||+||+|+||+++|++.+.+
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~  206 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF  206 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc
Confidence            99999999999999999999999999999999999999999986543

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-40  Score=261.65  Aligned_cols=195  Identities=36%  Similarity=0.562  Sum_probs=175.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++....   .++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG---GEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999888777777765543   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y~  168 (214)
                      +++++|++|||||...+. .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+. .+.+.+..|+
T Consensus        80 ~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~  158 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYA  158 (254)
T ss_pred             hcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhH
Confidence            999999999999986432 35678889999999999999999999999999998888999999998886 5778889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||++++.|+++++.|+.++||+|++|+||+++|++.+.+
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        159 ASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc
Confidence            9999999999999999999999999999999999987643

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-40  Score=268.65  Aligned_cols=193  Identities=26%  Similarity=0.399  Sum_probs=176.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+++|++||||||+|||++++++|+++|++|++++|+++.++++.+++....   .++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG---AEVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999988888777776532   257788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|+|.+++.|+||+++|..+..+.|.+..|+
T Consensus        80 ~~~g~iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~  157 (330)
T PRK06139         80 SFGGRIDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYS  157 (330)
T ss_pred             HhcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHH
Confidence            999999999999998654  357888999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccC-CcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRF-GIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~  206 (214)
                      +||+++.+|+++++.|+.+. ||+|++|+||+++|++..
T Consensus       158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~  196 (330)
T PRK06139        158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFR  196 (330)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccc
Confidence            99999999999999999875 999999999999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.5e-40  Score=261.33  Aligned_cols=191  Identities=25%  Similarity=0.309  Sum_probs=164.7

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|++.. .+..+++....+   ....+++|++|+++++++++++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~   82 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELG---AFVAGHCDVTDEASIDAVFETL   82 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcC---CceEEecCCCCHHHHHHHHHHH
Confidence            4688999999997  899999999999999999998886422 222233322212   2456899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+++|++|++|||||...+.  ..++.+.+.++|++.+++|+.+++.+++.++|+|.+  .|+||++||.++..+.|.+.
T Consensus        83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~  160 (272)
T PRK08159         83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYN  160 (272)
T ss_pred             HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcch
Confidence            99999999999999986431  235678899999999999999999999999999965  48999999999888899999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|++||+|+.+|+++++.|+.++||+||+|+||+++|++..
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        161 VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS  201 (272)
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence            99999999999999999999999999999999999998754

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=253.20  Aligned_cols=188  Identities=21%  Similarity=0.223  Sum_probs=167.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++..+++|++|+++++++++++.+
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT---DNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CCeEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988888877775542   2567889999999999999999999


Q ss_pred             HcC-CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           90 QYG-KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        90 ~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      ++| ++|++|||||...+ ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|.||++||..+   .+.+..|
T Consensus        79 ~~g~~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y  154 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGV  154 (227)
T ss_pred             HhCCCCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchh
Confidence            998 99999999986433 23577889999999999999999999999999998764 689999999654   3567899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +++|+|+++|+++++.|++++||+||+|+||+++|+.
T Consensus       155 ~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        155 ESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            9999999999999999999999999999999999984

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.1e-40  Score=259.07  Aligned_cols=191  Identities=23%  Similarity=0.265  Sum_probs=162.8

Q ss_pred             CccCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            9 PRLQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         9 ~~~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      ..+++|+++||||  ++|||+++|++|+++|++|++++|+.  +..+++.+++.      ..+.++++|++|++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP------EPAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC------CCCcEEeCCCCCHHHHHHHH
Confidence            4578999999999  89999999999999999999998764  22333333321      14678999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV  162 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  162 (214)
                      +++.+++|++|++|||||.....  ..++.+.+.++|++++++|+.+++.+++.++|+|++  +|+||++++.. ..+.|
T Consensus        77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~  153 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWP  153 (256)
T ss_pred             HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCC
Confidence            99999999999999999986431  134677889999999999999999999999999975  47899998753 45677


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+..|++||+|+.+|+++++.|++++||+||+|+||+++|++.+.+
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~  199 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI  199 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc
Confidence            8889999999999999999999999999999999999999986543

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-39  Score=258.84  Aligned_cols=190  Identities=18%  Similarity=0.210  Sum_probs=160.4

Q ss_pred             cCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++|++|||||  ++|||+++|++|+++|++|++++|.....+. .+++....+   ....+++|++|+++++++++++.
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFG---SDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcC---CcceeeccCCCHHHHHHHHHHHH
Confidence            67999999996  6899999999999999999998764222222 222222211   22468899999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCC---CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           89 SQYGKLDIMFNNAGIVDEAK---PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      +++|++|++|||||...+..   ..+.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+.+.
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~  157 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYN  157 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcc
Confidence            99999999999999864321   12346788999999999999999999999999954  47899999999988889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|++||+|+++|+++++.|++++||+||+|+||+++|++..
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~  198 (260)
T PRK06997        158 TMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS  198 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc
Confidence            99999999999999999999999999999999999998754

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=257.81  Aligned_cols=193  Identities=36%  Similarity=0.510  Sum_probs=171.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++..+.+|++|+++++++++++.+
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG---GKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999888877777765433   2577889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCC-C-CCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGG-V-TSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~-~-~~~~  166 (214)
                      .+|++|++|||||....  .++.+.+.++|++++++|+.+++.+++.+.|.|.+++ .++||++||..+..+. + ....
T Consensus        83 ~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~  160 (253)
T PRK05867         83 ELGGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSH  160 (253)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccc
Confidence            99999999999998643  3567889999999999999999999999999997764 5789999998876543 3 4579


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~  201 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP  201 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc
Confidence            99999999999999999999999999999999999998654

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=262.01  Aligned_cols=190  Identities=32%  Similarity=0.558  Sum_probs=169.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC---------cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD---------DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      +++|++|||||++|||+++|++|+++|++|++++++.         +.+++..+++....   .++.++.+|++|++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG---GEAVANGDDIADWDGAA   80 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcC---CceEEEeCCCCCHHHHH
Confidence            7899999999999999999999999999999998765         55555555554432   25678899999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC------CCeEEEecCC
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG------RGSIISTASV  155 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~~sS~  155 (214)
                      ++++++.+.+|++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.++|+|.++.      .|+||++||.
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~  158 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG  158 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence            9999999999999999999998653  3577889999999999999999999999999997542      3799999999


Q ss_pred             CcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          156 CGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       156 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .+..+.+++..|+++|+|+++|+++++.|++++||+||+|+|| +.|++..
T Consensus       159 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~  208 (286)
T PRK07791        159 AGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE  208 (286)
T ss_pred             hhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch
Confidence            9999999999999999999999999999999999999999999 8898754

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-39  Score=258.99  Aligned_cols=193  Identities=27%  Similarity=0.452  Sum_probs=175.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|++++.++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG---FDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999877777766665332   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.+....|+
T Consensus        80 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (275)
T PRK05876         80 LLGHVDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYG  157 (275)
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHH
Confidence            99999999999998643  3577889999999999999999999999999997765 68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|+++.+|+++++.|+.++||+|++|+||+++|++..+
T Consensus       158 asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        158 VAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence            999999999999999999999999999999999998654

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=9.6e-39  Score=256.15  Aligned_cols=193  Identities=54%  Similarity=0.923  Sum_probs=173.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..    ..++.++++|++|+++++++++++.+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG----EPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC----CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987666655555422    13578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||...+...++.+.+.++|++++++|+.+++.+++++.|.|.+++.|+||+++|..+..+.+...+|++
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~  170 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTG  170 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHH
Confidence            99999999999998654334577889999999999999999999999999998877889999999999888888889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|++++.+++.++.|++++||+|++++||++.|++..
T Consensus       171 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        171 SKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL  207 (280)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence            9999999999999999999999999999999998754

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=8e-39  Score=256.36  Aligned_cols=196  Identities=30%  Similarity=0.460  Sum_probs=176.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++....   .++.++++|++|++++..+++++.+
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG---GEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998877777766665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCC-------------CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAK-------------PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~-------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      +++++|++|||||...+..             .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~  163 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN  163 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence            9999999999999754321             246678899999999999999999999999999888889999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          157 GVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       157 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +..+.+....|+++|+|++.|+++++.|+.++||+||+|+||++.|++.+.+
T Consensus       164 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  215 (278)
T PRK08277        164 AFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL  215 (278)
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh
Confidence            9999999999999999999999999999999999999999999999986544

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-39  Score=252.94  Aligned_cols=198  Identities=38%  Similarity=0.620  Sum_probs=178.7

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+.+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+.+....   .++.++.+|++|.+++.++++++
T Consensus         2 ~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~   78 (253)
T PRK06172          2 SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG---GEALFVACDVTRDAEVKALVEQT   78 (253)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHH
Confidence            356889999999999999999999999999999999999887777666665432   25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.+|++|++|||||...+. .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.+.+..|
T Consensus        79 ~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y  157 (253)
T PRK06172         79 IAAYGRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIY  157 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchh
Confidence            99999999999999986433 34677899999999999999999999999999988878899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +++|++++.|+++++.|+.++||+|++|+||+++|++.++..
T Consensus       158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~  199 (253)
T PRK06172        158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAY  199 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhc
Confidence            999999999999999999999999999999999999987653

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=251.75  Aligned_cols=192  Identities=32%  Similarity=0.501  Sum_probs=170.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+ ..++..+.+....   .++.++++|++|++++.++++++.
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG---RRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998764 3455555554432   256788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC--Ccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT--SHA  166 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--~~~  166 (214)
                      +.++++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.+.  +..
T Consensus        82 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  159 (254)
T PRK06114         82 AELGALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAH  159 (254)
T ss_pred             HHcCCCCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcch
Confidence            999999999999998653  3567889999999999999999999999999998888899999999998876654  689


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++|+|++.|+++++.|+.++||+||+|+||+++|++..
T Consensus       160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~  199 (254)
T PRK06114        160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT  199 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence            9999999999999999999999999999999999999864

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=252.40  Aligned_cols=189  Identities=33%  Similarity=0.486  Sum_probs=169.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|++++.++++++.+
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG------ERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CeeEEEEecCCCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999998876666555441      2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||.....  . .+.+.++|++.+++|+.+++.+++.++|+|+ ++.|+||++||..+..+.+.+..|++
T Consensus        77 ~~g~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~a  152 (261)
T PRK08265         77 RFGRVDILVNLACTYLDD--G-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPA  152 (261)
T ss_pred             HhCCCCEEEECCCCCCCC--c-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHH
Confidence            999999999999976432  2 3568899999999999999999999999997 55789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.|+++++.|+.++||+||+|+||+++|++....
T Consensus       153 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~  191 (261)
T PRK08265        153 SKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL  191 (261)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh
Confidence            999999999999999999999999999999999986543

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-38  Score=250.80  Aligned_cols=190  Identities=19%  Similarity=0.269  Sum_probs=169.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||++|||+++|++|+ +|++|++++|+.+.++++.+++.....  ..+.+++||++|+++++++++++.+.+|+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGA--TSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccC--CceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999 599999999999888888877765432  24678999999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      +|++|||||...+.  +..+.+.+++.+++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+.+..|+++|+
T Consensus        78 id~lv~nag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  155 (246)
T PRK05599         78 ISLAVVAFGILGDQ--ERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKA  155 (246)
T ss_pred             CCEEEEecCcCCCc--hhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHH
Confidence            99999999986432  344567778899999999999999999999998764 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|+++++.|++++||+||+|+||+++|++....
T Consensus       156 a~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~  191 (246)
T PRK05599        156 GLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM  191 (246)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC
Confidence            999999999999999999999999999999986543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=251.22  Aligned_cols=193  Identities=32%  Similarity=0.522  Sum_probs=173.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||++++++|+++|++|++++|+ +..++..+.+....   .++.++++|+++.+++.++++++.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG---RKVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999988 45555555554332   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+.+..|+
T Consensus        87 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (258)
T PRK06935         87 EEFGKIDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYT  164 (258)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhH
Confidence            999999999999998643  356778899999999999999999999999999988889999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.++++++.|+.++||+||.|+||+++|++.+.
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence            999999999999999999999999999999999998654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.4e-39  Score=258.39  Aligned_cols=197  Identities=22%  Similarity=0.275  Sum_probs=155.7

Q ss_pred             CCCccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhh---------ccCCCC---CCceEEEe
Q 044923            7 MSPRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS---------SSSSSA---NGCSYVHC   72 (214)
Q Consensus         7 ~~~~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~---------~~~~~~---~~v~~~~~   72 (214)
                      |..+++||++||||++  +|||+++|+.|+++|++|++.++.+ .++...+...         ...+..   .++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            5677899999999996  9999999999999999999976541 1111101000         000000   01111223


Q ss_pred             eCCCH------------------HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHH
Q 044923           73 DVTKE------------------KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT  134 (214)
Q Consensus        73 D~~~~------------------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  134 (214)
                      |+++.                  ++++++++++.+++|++|+||||||.......++.+.+.++|++.+++|+.|++.++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            33333                  468999999999999999999999975432346788999999999999999999999


Q ss_pred             HHHHHhhccCCCCeEEEecCCCcccCCCCCc-cchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCcccc
Q 044923          135 KHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       135 ~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++++|+|+++  |+||+++|..+..+.|.+. .|++||+|+++|+++++.|+++ +||+||+|+||++.|++..
T Consensus       161 ~a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        161 SHFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             HHHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence            9999999764  7899999999988888875 8999999999999999999987 5999999999999999864

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.3e-38  Score=251.32  Aligned_cols=181  Identities=33%  Similarity=0.535  Sum_probs=166.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+..              .++.+++||++|+++++++++++.+
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------------~~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------------NDVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999876431              1467899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +++++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+.+.+.+|++
T Consensus        69 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  146 (258)
T PRK06398         69 KYGRIDILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVT  146 (258)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhh
Confidence            99999999999998643  3577889999999999999999999999999998887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|+.+. |+||+|+||+++|++...
T Consensus       147 sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        147 SKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             hHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence            9999999999999999875 999999999999998654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=250.64  Aligned_cols=194  Identities=29%  Similarity=0.421  Sum_probs=175.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++..+.+|++|+++++++++++.+
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG---IKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999877777766665432   2467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.++||++||..+..+.+....|++
T Consensus        83 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (254)
T PRK08085         83 DIGPIDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAA  160 (254)
T ss_pred             hcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHH
Confidence            99999999999998643  3567889999999999999999999999999998777899999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.+++.++.|+.++||+||+|+||+++|++....
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~  199 (254)
T PRK08085        161 SKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL  199 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh
Confidence            999999999999999999999999999999999987643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.1e-38  Score=249.94  Aligned_cols=191  Identities=31%  Similarity=0.523  Sum_probs=166.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.+.+++|+++||||++|||+++|+.|+++|++|+++.++.+..   .+.+...     ++.++++|++|++++.+++++
T Consensus         1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~-----~~~~~~~Dl~~~~~~~~~~~~   72 (255)
T PRK06463          1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK-----GVFTIKCDVGNRDQVKKSKEV   72 (255)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC-----CCeEEEecCCCHHHHHHHHHH
Confidence            45568899999999999999999999999999998887654322   2222221     367899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-CCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-GGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~~~~~  165 (214)
                      +.+.++++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+.. +.++..
T Consensus        73 ~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (255)
T PRK06463         73 VEKEFGRVDVLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTT  150 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCcc
Confidence            99999999999999998643  356778899999999999999999999999999877789999999988875 456778


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||+|+++|+++++.|+.++||+|++|+||+++|++...
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence            899999999999999999999999999999999999998643

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=8.4e-40  Score=244.21  Aligned_cols=187  Identities=34%  Similarity=0.559  Sum_probs=167.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+|++||+.||||++++++|+++|..+.++..+.|+.+... ++++..+ ..++.|++||+++..+++++++++..
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p-~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINP-SVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCC-CceEEEEEeccccHHHHHHHHHHHHH
Confidence            678999999999999999999999999999888888877765543 3444333 34789999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCCCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      .+|.+|++||+||+..          ..+|++++++|+.|.+..+...+|+|.++.   +|.|||+||+.|..|.|..+.
T Consensus        80 ~fg~iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV  149 (261)
T KOG4169|consen   80 TFGTIDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV  149 (261)
T ss_pred             HhCceEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh
Confidence            9999999999999863          456999999999999999999999998874   679999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHH--HccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVE--LGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e--~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++||+++.+|+|+++.+  |.+.||++++||||+++|++.+++
T Consensus       150 Y~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  150 YAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             hhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHH
Confidence            999999999999999877  577899999999999999998766

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.6e-38  Score=249.42  Aligned_cols=192  Identities=26%  Similarity=0.470  Sum_probs=169.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||++++++|+++|++|++++++.  .++..+.+....   .++..+++|++|.+++.++++++.+
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALG---RRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            68899999999999999999999999999999887653  234444444321   2567899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++++|++|||||...+.  ++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+....|+
T Consensus        82 ~~~~~D~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (253)
T PRK08993         82 EFGHIDILVNNAGLIRRE--DAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYT  159 (253)
T ss_pred             HhCCCCEEEECCCCCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchH
Confidence            999999999999986433  467889999999999999999999999999997764 58999999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|+|+++|+++++.|+.++||+||+|+||+++|++...+
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~  199 (253)
T PRK08993        160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL  199 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh
Confidence            9999999999999999999999999999999999986543

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.2e-38  Score=259.83  Aligned_cols=192  Identities=23%  Similarity=0.306  Sum_probs=164.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|++++|||||+|||+++|++|+++|++|++++|++++++++.+++....+ ..++..+.+|+++  ++.+.++++.+.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~-~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS-KTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC-CcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            689999999999999999999999999999999999988888877765432 1256788999985  3334444555554


Q ss_pred             C--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-C-CCCCccc
Q 044923           92 G--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-G-GVTSHAY  167 (214)
Q Consensus        92 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~-~~~~~~y  167 (214)
                      +  ++|++|||||...+....+.+.+.+++++++++|+.|++.+++.++|.|.+++.|+||++||.++.. + .|....|
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence            4  5679999999875433356788999999999999999999999999999988889999999998864 3 5888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++||+++++|+++++.|++++||+|++|+||+++|++..
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            999999999999999999999999999999999999865

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=250.92  Aligned_cols=188  Identities=22%  Similarity=0.220  Sum_probs=169.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||++|||+++|++|+++|++|++++|+++.+++..+++...    .++.++++|++|+++++++++++.+.++++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY----GEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc----CCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            6999999999999999999999999999999988777777776543    146789999999999999999999999999


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhc-cCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMK-PAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      |+||||||.......++.+.+.++|.+.+++|+.+++.+++.++|.|. +++.|+||++||..+..+.+....|+++|++
T Consensus        78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa  157 (259)
T PRK08340         78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAG  157 (259)
T ss_pred             CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHH
Confidence            999999998643333567788999999999999999999999999886 4567899999999999889999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +.+|+|+++.|++++||+||+|+||+++|++.+
T Consensus       158 ~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        158 LVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEeccCcccCccHH
Confidence            999999999999999999999999999999864

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=255.82  Aligned_cols=192  Identities=25%  Similarity=0.423  Sum_probs=173.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++..    ...+..+.||++|+++++++++++.+
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG----DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC----CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998877776666532    12466778999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|+|.++ .|+||++||..+..+.+.+..|++
T Consensus        82 ~~g~id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  158 (296)
T PRK05872         82 RFGGIDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCA  158 (296)
T ss_pred             HcCCCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHH
Confidence            99999999999998653  457888999999999999999999999999999765 489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.|+++++.|+.++||+|++++||+++|++.+..
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence            999999999999999999999999999999999987653

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-38  Score=248.36  Aligned_cols=191  Identities=27%  Similarity=0.368  Sum_probs=165.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|++|||||++|||+++|++|+++|++|++.. ++.+..++...++....   ..+..+++|+++.+++..+++++.+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG---GSAFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC---CceEEEecccCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998875 55566666655554432   2467889999999999999988876


Q ss_pred             H----cC--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           90 Q----YG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        90 ~----~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      .    ++  ++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+.  |+||++||..+..+.+.
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~  154 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPD  154 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCC
Confidence            3    34  89999999997532  356788999999999999999999999999999764  78999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..+|++||+++++++++++.|+.++||+||+|+||+++|++..++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  199 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL  199 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc
Confidence            999999999999999999999999999999999999999987543

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-38  Score=247.52  Aligned_cols=195  Identities=33%  Similarity=0.509  Sum_probs=176.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+++....   ..+.++++|++|.++++++++++.+
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG---GKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999998877777777765432   2467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||.... ..++.+.+.++|++.+++|+.+++.++++++|+|.+.+.++||++||..+..+.+++..|++
T Consensus        82 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  160 (252)
T PRK07035         82 RHGRLDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSI  160 (252)
T ss_pred             HcCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHH
Confidence            99999999999997532 23467788999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ||++++.|+++++.|+.++||+|++|+||+++|++....
T Consensus       161 sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~  199 (252)
T PRK07035        161 TKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL  199 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc
Confidence            999999999999999999999999999999999987654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-38  Score=248.88  Aligned_cols=193  Identities=30%  Similarity=0.481  Sum_probs=176.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+....   .++.++++|++|++++.++++++.+
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG---IEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998877777666665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+.  ++.+.+.++|++++++|+.+++.+.+.++|+|.+++.++||++||..+..+.+.+..|++
T Consensus        84 ~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRI--PMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAA  161 (265)
T ss_pred             hCCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHH
Confidence            999999999999987543  567889999999999999999999999999998888899999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|+.++||+|++|+||.+.|++..+
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhh
Confidence            99999999999999999999999999999999998654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=247.48  Aligned_cols=196  Identities=35%  Similarity=0.524  Sum_probs=172.8

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |..++++|+++||||++|||+++|+.|+++|++|+++.|+. +..+...+++....   .++.++.+|++|.+++.++++
T Consensus         1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~i~~~~~   77 (261)
T PRK08936          1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG---GEAIAVKGDVTVESDVVNLIQ   77 (261)
T ss_pred             CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHH
Confidence            45568999999999999999999999999999999888854 34444555554332   257789999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~  164 (214)
                      ++.+.++++|++|||||...+.  ++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..+.+.+
T Consensus        78 ~~~~~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~  155 (261)
T PRK08936         78 TAVKEFGTLDVMINNAGIENAV--PSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLF  155 (261)
T ss_pred             HHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCC
Confidence            9999999999999999986543  467788999999999999999999999999998765 6899999999999899999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+|+++|+|+..|+++++.|+.++||+|++|+||+++|++..+
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  198 (261)
T PRK08936        156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc
Confidence            9999999999999999999999999999999999999998654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=246.84  Aligned_cols=194  Identities=27%  Similarity=0.408  Sum_probs=176.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||++++++|+++|++|++.+|+++..++..+.+....   .++..+++|++|+++++++++++.+
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG---LSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877777666665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+  .++.+.+.++|++++++|+.+++.+.+.+.+.|.+++.++||++||..+..+.+.+..|++
T Consensus        84 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~  161 (255)
T PRK07523         84 EIGPIDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTA  161 (255)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHH
Confidence            99999999999998654  3567889999999999999999999999999998888899999999999889999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.+++.++.|++++||+|++|+||++.|++....
T Consensus       162 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~  200 (255)
T PRK07523        162 TKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL  200 (255)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh
Confidence            999999999999999999999999999999999987654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=7.9e-38  Score=248.62  Aligned_cols=188  Identities=33%  Similarity=0.487  Sum_probs=162.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+..      ..++.++.+|++|.+++.++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH------GDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc------CCceEEEEeccCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876655543321      12577899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCH----HHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQ----AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .++++|++|||||..... .++.+.+.    ++|++.+++|+.+++.++++++|.|.+.+ |++|+++|..+..+.+...
T Consensus        76 ~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~  153 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGP  153 (262)
T ss_pred             HhCCCCEEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCc
Confidence            999999999999975321 22333333    57999999999999999999999997654 7899999999998888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|+++|+|+++|+++++.|++++ |+||+|+||++.|++..
T Consensus       154 ~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~  193 (262)
T TIGR03325       154 LYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG  193 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence            99999999999999999999987 99999999999999864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=251.07  Aligned_cols=190  Identities=27%  Similarity=0.382  Sum_probs=166.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++|++|||||++|||+++|++|+++|++|++.+|+.  +..+++.+.+....   .++.++++|++|++++.++++++
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG---RKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcC---CeEEEEEccCCCHHHHHHHHHHH
Confidence            47889999999999999999999999999999987653  33444444443321   25678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.+|++|++|||||...+. .++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+.+...+|
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y  199 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDY  199 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchh
Confidence            99999999999999975322 34678899999999999999999999999999965  3789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +++|+|++.|+++++.|++++||+||+|+||+++|++.
T Consensus       200 ~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence            99999999999999999999999999999999999985

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=255.56  Aligned_cols=193  Identities=28%  Similarity=0.400  Sum_probs=175.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++....   .++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g---~~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG---GEALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999888877777776433   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+.+..|+
T Consensus        81 ~~~g~iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  158 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYC  158 (334)
T ss_pred             HHCCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHH
Confidence            999999999999998643  356788999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHcc--CCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGR--FGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~--~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++|+++++|+++++.|+..  .+|+|+.|+||.++|++..
T Consensus       159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence            9999999999999999875  4799999999999999754

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=248.15  Aligned_cols=190  Identities=35%  Similarity=0.519  Sum_probs=173.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++||||||+|||++++++|+++|++|++.+|+++.+++..+.+.       .+.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-------cceEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998877666555442       367889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|++
T Consensus        75 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  152 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCA  152 (273)
T ss_pred             HcCCCCEEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHH
Confidence            99999999999998753  3567889999999999999999999999999999998999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.|+++++.|+.+.||+++.|+||++.|++....
T Consensus       153 sKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        153 SKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence            999999999999999999999999999999999986543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.9e-38  Score=230.51  Aligned_cols=187  Identities=20%  Similarity=0.256  Sum_probs=171.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+.|-++|||||++|||+++|++|.+.|..||+++|+++.+++..+...       .+....||+.|.++++++++++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-------~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-------EIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-------chheeeecccchhhHHHHHHHHHh
Confidence            4678999999999999999999999999999999999998888777654       467789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +|+.+|++|||||+..+....-.+...++.++.+.+|+.+++++++.++|++.+++.+.||++||.-+..|....+.||+
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYca  154 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCA  154 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchh
Confidence            99999999999999865433223445677899999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      +|+|++.|+.+|+.+++..+|.|..+.|..|+|+
T Consensus       155 TKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         155 TKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999997

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.8e-37  Score=244.48  Aligned_cols=200  Identities=32%  Similarity=0.493  Sum_probs=177.4

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI   80 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~   80 (214)
                      |..+..|  .+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++....   .++.++.+|++|++++
T Consensus         1 ~~~~~~~--~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~i   75 (255)
T PRK06113          1 MFNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQEL   75 (255)
T ss_pred             CCCcccc--CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHH
Confidence            5555544  4789999999999999999999999999999999998877777666665432   2577889999999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      .++++.+.+.++++|++|||||...+.  + .+.+.++|++.+++|+.+++.+++.+.|+|.+.+.++||++||..+..+
T Consensus        76 ~~~~~~~~~~~~~~d~li~~ag~~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  152 (255)
T PRK06113         76 SALADFALSKLGKVDILVNNAGGGGPK--P-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK  152 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCC--C-CCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence            999999999999999999999986543  2 3678899999999999999999999999998777789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+.+..|+++|+|+++|+++++.++.+.||+||+|+||+++|++.+..
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~  200 (255)
T PRK06113        153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc
Confidence            999999999999999999999999999999999999999999986643

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.4e-37  Score=245.05  Aligned_cols=197  Identities=29%  Similarity=0.423  Sum_probs=177.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++....+ ..++.++.+|+++++++.++++++.+
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP-EREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999998877777766654421 23678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.+....|++
T Consensus        85 ~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         85 HWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            99999999999998532  3466788999999999999999999999999998887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|++++.|+++++.|+.+.||++++|+||++.|++...+.
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~  202 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPL  202 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccccc
Confidence            9999999999999999999999999999999999976543

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-37  Score=250.23  Aligned_cols=191  Identities=30%  Similarity=0.414  Sum_probs=167.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc--chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD--LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++|++|||||++|||+++++.|+++|++|++.+++.+  ..++..+.+....   .++.+++||++|+++++++++++
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~  128 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG---RKAVALPGDLKDEAFCRQLVERA  128 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC---CeEEEEecCCCCHHHHHHHHHHH
Confidence            478899999999999999999999999999998887543  2334444444322   25778999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.++++|+||||||..... .++.+.+.++|++.+++|+.+++.+++.++|+|.+  .++||++||..+..+.+.+..|
T Consensus       129 ~~~~g~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y  205 (300)
T PRK06128        129 VKELGGLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDY  205 (300)
T ss_pred             HHHhCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhH
Confidence            99999999999999975432 35678899999999999999999999999999975  3789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++||++++.|+++++.|+.++||+||+|+||+++|++..
T Consensus       206 ~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~  244 (300)
T PRK06128        206 ASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP  244 (300)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence            999999999999999999999999999999999999864

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-37  Score=246.07  Aligned_cols=194  Identities=25%  Similarity=0.346  Sum_probs=169.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-------hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-------GESVCEDISSSSSSANGCSYVHCDVTKEKDIEN   82 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~   82 (214)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+.+.       +++..+++....   .++.++++|+++++++.+
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG---GQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC---CceEEEEecCCCHHHHHH
Confidence            4688999999999999999999999999999999997653       233334443322   257889999999999999


Q ss_pred             HHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-
Q 044923           83 AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-  161 (214)
Q Consensus        83 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-  161 (214)
                      +++++.+.++++|++|||||...+.  ++.+.+.++|++++++|+.+++.+++++.|+|.+++.++||++||..+..+. 
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~  157 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLT--GTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKW  157 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCC--CcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccc
Confidence            9999999999999999999986543  4677899999999999999999999999999998878899999998887776 


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC-cccCcccccc
Q 044923          162 -VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPY-AVSSPMAKGF  208 (214)
Q Consensus       162 -~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg-~v~t~~~~~~  208 (214)
                       +++.+|++||++++.|+++++.|+.++||+|++|+|| +++|++.+.+
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~  206 (273)
T PRK08278        158 FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNL  206 (273)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhc
Confidence             8889999999999999999999999999999999999 6899876654

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=245.96  Aligned_cols=192  Identities=22%  Similarity=0.286  Sum_probs=170.4

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++....+  .++.++++|++|++++.++++  
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~--   77 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG--VDVAVHALDLSSPEAREQLAA--   77 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcC--CceEEEEecCCCHHHHHHHHH--
Confidence            4567899999999999999999999999999999999998877777666654322  257789999999999988875  


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                        .++++|++|||+|...+  .++.+.+.++|+.++++|+.+++.+++.++|.|.+++.|+||++||..+..+.+.+..|
T Consensus        78 --~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y  153 (259)
T PRK06125         78 --EAGDIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICG  153 (259)
T ss_pred             --HhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHh
Confidence              35899999999998643  35778899999999999999999999999999998877899999999998888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|+|++.|+++++.|+.+.||+||+|+||+++|++..+
T Consensus       154 ~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  193 (259)
T PRK06125        154 SAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLT  193 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHH
Confidence            9999999999999999999999999999999999997543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-37  Score=244.38  Aligned_cols=190  Identities=25%  Similarity=0.398  Sum_probs=164.7

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ...+++|++|||||++|||++++++|+++|++|++++|++. .++..+++....   .++.++++|++|++++.++++++
T Consensus         3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK12823          3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAG---GEALALTADLETYAGAQAAMAAA   78 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcC---CeEEEEEEeCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999753 334444443322   25678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.++++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+.  .+...+|
T Consensus        79 ~~~~~~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y  155 (260)
T PRK12823         79 VEAFGRIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPY  155 (260)
T ss_pred             HHHcCCCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCcc
Confidence            9999999999999996432 235678899999999999999999999999999988878899999998764  2355789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +++|++++.|+++++.|++++||+|++|+||+++||+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence            9999999999999999999999999999999999986

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=245.35  Aligned_cols=188  Identities=24%  Similarity=0.325  Sum_probs=167.5

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +..+++||++|||||++|||++++++|+++|++|++++|+.+..      .      ..++.++++|++|++++++++++
T Consensus         3 ~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~~~D~~~~~~~~~~~~~   70 (260)
T PRK06523          3 FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L------PEGVEFVAADLTTAEGCAAVARA   70 (260)
T ss_pred             cCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c------CCceeEEecCCCCHHHHHHHHHH
Confidence            34468899999999999999999999999999999999975421      1      12467899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-CCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~  165 (214)
                      +.+.++++|++|||||.......++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+ ...
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~  150 (260)
T PRK06523         71 VLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTT  150 (260)
T ss_pred             HHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcc
Confidence            9999999999999999754333456778899999999999999999999999999988788999999999988766 788


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|+++|++++.|++.++.|+.++||++++|+||+++|++..
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~  191 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV  191 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH
Confidence            99999999999999999999999999999999999999864

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=248.66  Aligned_cols=195  Identities=25%  Similarity=0.362  Sum_probs=171.2

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ...+++|+++||||+||||+++|+.|+++|++|++++|+.+.++++.+++....   .++.++++|++|++++.++++++
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~---~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG---GDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHH
Confidence            345788999999999999999999999999999999999888777776665432   25678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCC--CHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-CCCCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDN--DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-GGVTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~~~~  164 (214)
                      .+.+|++|++|||||.....  ++.+.  +.++++..+++|+.|++.+++.++|.|++.+.++||++||.++.. +.|..
T Consensus       112 ~~~~g~id~li~~AG~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~  189 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRR--PLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLF  189 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCc--chhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCc
Confidence            99999999999999986543  23332  467899999999999999999999999988889999999977654 36778


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|+++|+|+++|+++++.|+.++||+|++|+||+++|++...
T Consensus       190 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~  232 (293)
T PRK05866        190 SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP  232 (293)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc
Confidence            8999999999999999999999999999999999999999764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=244.83  Aligned_cols=195  Identities=33%  Similarity=0.570  Sum_probs=174.0

Q ss_pred             ccCCcEEEEecCCC-hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAG-SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~-gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|+++||||+| |||+++++.|+++|++|++++|+.+.+++..+.+....+. .++.++++|++++++++++++++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL-GRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999985 9999999999999999999999887777776666542221 257789999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+|++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .|+||+++|..+..+.+.+..|
T Consensus        93 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  170 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHY  170 (262)
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcch
Confidence            999999999999997643  3567889999999999999999999999999998776 7899999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|+|+++|+++++.|+.++||+|++|+||+++|++...
T Consensus       171 ~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        171 AAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence            9999999999999999999999999999999999998653

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.2e-37  Score=244.14  Aligned_cols=190  Identities=31%  Similarity=0.503  Sum_probs=171.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||+++++.|+++|++|++++|+.+..++...++....   .++.++++|++|+++++++++++.++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG---GKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999877777766665432   2577899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.+....|+++|
T Consensus        79 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (256)
T PRK08643         79 DLNVVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTK  156 (256)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHH
Confidence            99999999998643  3467788999999999999999999999999997764 47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.|++.++.|+.++||+|++|+||+++|+++.+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        157 FAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH
Confidence            999999999999999999999999999999998754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-37  Score=245.06  Aligned_cols=191  Identities=23%  Similarity=0.288  Sum_probs=166.9

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCC-----------cchhhHHHHhhccCCCCCCceEEEeeCCC
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKD-----------DLGESVCEDISSSSSSANGCSYVHCDVTK   76 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   76 (214)
                      .++||++|||||+  +|||+++|++|+++|++|++++++.           +..++..+++...   ..++.++++|++|
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~D~~~   79 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN---GVKVSSMELDLTQ   79 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc---CCeEEEEEcCCCC
Confidence            5889999999999  4999999999999999999876431           1112222333322   2357889999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           77 EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        77 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      ++++.++++++.+.+|++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~  157 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQ  157 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence            999999999999999999999999998643  357888999999999999999999999999999888789999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          157 GVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       157 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +..+.+++..|+++|++++.|+++++.|+.++||+|++|+||+++|++.
T Consensus       158 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~  206 (256)
T PRK12859        158 FQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM  206 (256)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC
Confidence            9999999999999999999999999999999999999999999999864

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=253.32  Aligned_cols=194  Identities=22%  Similarity=0.292  Sum_probs=168.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++....+ ..++.++++|++|.++++++++++.
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP-DAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999998888877777765432 2357889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC--------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--------  160 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------  160 (214)
                      +.++++|+||||||...+   +..+.+.++|+.++++|+.|++.+++.++|.|.+. .++||++||..+..+        
T Consensus        89 ~~~~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             HhCCCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence            999999999999998653   23456778999999999999999999999999765 579999999877543        


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCcccCccccc
Q 044923          161 ----GVTSHAYTSSKHGVVGLMKNTAVEL--GRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       161 ----~~~~~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                          ++.+..|+.||+|+..|++.++.++  ...||+||+++||++.|++..+
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence                2456789999999999999999864  4578999999999999998643

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=246.22  Aligned_cols=187  Identities=36%  Similarity=0.506  Sum_probs=164.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.      .++.++++|++|+++++++++++.+.
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG------DHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999998877666555431      24678999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHH----HHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAE----FERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      ++++|++|||||..... .++.+.+.++    |++++++|+.+++.+++.++|.|+++ .|+||+++|..+..+.++...
T Consensus        78 ~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~  155 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPL  155 (263)
T ss_pred             cCCCCEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCch
Confidence            99999999999986422 2345556654    89999999999999999999998765 489999999999998888999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++|++++.|+++++.|+++ +|+||+|+||+++|++..
T Consensus       156 Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        156 YTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcC
Confidence            999999999999999999988 499999999999999854

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.5e-37  Score=243.34  Aligned_cols=190  Identities=32%  Similarity=0.499  Sum_probs=168.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+..++..+.+.      .++.++++|++|++++.++++++.
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG------ENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC------CceEEEEccCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999988765554433321      246789999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|++|||||...+...++.+.+.++|++.+++|+.+++.+++.+.|+|.+. .++||++||..+..+.+.+.+|+
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~  158 (255)
T PRK05717         80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYA  158 (255)
T ss_pred             HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchH
Confidence            99999999999999875443456778999999999999999999999999999765 47899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++|++++.|++.++.++.+ +|+|++|+||+++|++..
T Consensus       159 ~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~  195 (255)
T PRK05717        159 ASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPS  195 (255)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence            9999999999999999986 599999999999998743

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-37  Score=249.97  Aligned_cols=198  Identities=30%  Similarity=0.513  Sum_probs=172.6

Q ss_pred             cCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHH
Q 044923            4 ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIEN   82 (214)
Q Consensus         4 ~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~   82 (214)
                      +.+|+.+++||++|||||++|||+++|++|+++|++|++.+++. +..++..+++....   .++.++++|++|++++.+
T Consensus         3 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dv~d~~~~~~   79 (306)
T PRK07792          3 RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG---AKAVAVAGDISQRATADE   79 (306)
T ss_pred             cccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHHH
Confidence            45677889999999999999999999999999999999988753 44556666665432   357889999999999999


Q ss_pred             HHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-------CCCeEEEecCC
Q 044923           83 AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-------GRGSIISTASV  155 (214)
Q Consensus        83 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~g~iv~~sS~  155 (214)
                      +++++.+ +|++|+||||||...+.  .+.+.+.++|+..+++|+.+++.+++.+.|+|.++       ..|+||++||.
T Consensus        80 ~~~~~~~-~g~iD~li~nAG~~~~~--~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~  156 (306)
T PRK07792         80 LVATAVG-LGGLDIVVNNAGITRDR--MLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSE  156 (306)
T ss_pred             HHHHHHH-hCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCc
Confidence            9999999 99999999999987543  46788999999999999999999999999998653       13799999999


Q ss_pred             CcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          156 CGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       156 ~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+..+.+....|+++|++++.|++.++.|+.++||+||+|+|| ..|+|....
T Consensus       157 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~  208 (306)
T PRK07792        157 AGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADV  208 (306)
T ss_pred             ccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhh
Confidence            9998889999999999999999999999999999999999999 488876543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-37  Score=268.28  Aligned_cols=190  Identities=32%  Similarity=0.502  Sum_probs=170.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ...||++|||||++|||+++|++|+++|++|++++|+.+.++++.+.+.      .++..+.+|++|+++++++++++.+
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG------DEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998877766655442      2456789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+. .++.+.+.++|++++++|+.+++.+++.++|+|.  +.|+||++||.++..+.+++..|++
T Consensus       340 ~~g~id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~a  416 (520)
T PRK06484        340 RWGRLDVLVNNAGIAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCA  416 (520)
T ss_pred             HcCCCCEEEECCCCcCCC-CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHH
Confidence            999999999999986432 3567889999999999999999999999999993  3589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.|+++++.|+.++||+||+|+||+++|++....
T Consensus       417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  455 (520)
T PRK06484        417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLAL  455 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhh
Confidence            999999999999999999999999999999999987543

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-37  Score=247.29  Aligned_cols=184  Identities=24%  Similarity=0.343  Sum_probs=166.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc-
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY-   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-   91 (214)
                      +|+++||||++|||+++|++|+++|++|++++|+.+.++++.+    .     .+.++.+|++|+++++++++++.+.+ 
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~-----~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E-----GLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C-----CceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999998766544332    1     36788999999999999999998776 


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      |++|++|||||...+.  .+.+.+.++|+.++++|+.|++.+++.++|.|.+++.++||++||..+..+.+....|+++|
T Consensus        75 g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  152 (277)
T PRK05993         75 GRLDALFNNGAYGQPG--AVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASK  152 (277)
T ss_pred             CCccEEEECCCcCCCC--CcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHH
Confidence            6899999999987543  56788999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.|+++++.|+.++||+|++|+||+++|++..+
T Consensus       153 ~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        153 FAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            999999999999999999999999999999998653

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=5.6e-37  Score=241.65  Aligned_cols=192  Identities=31%  Similarity=0.491  Sum_probs=169.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||.++|++|+++|++|++++|+..  ++..+.+....   .++.++.+|+++++++.++++++.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALG---RRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999998652  33334333322   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|++|||||...+.  ++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+
T Consensus        77 ~~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  154 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRRA--DAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYT  154 (248)
T ss_pred             HcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhH
Confidence            999999999999987543  456788999999999999999999999999997765 68999999999888888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|++++.++++++.|+.++||+|++|+||++.|++.++.
T Consensus       155 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~  194 (248)
T TIGR01832       155 ASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQAL  194 (248)
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcc
Confidence            9999999999999999999999999999999999986543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-37  Score=241.15  Aligned_cols=186  Identities=25%  Similarity=0.392  Sum_probs=166.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ||+++||||++|||+++++.|+++|++|++++|+.+.+++..+.+....   .++.++++|++|+++++++++++.+.++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP---GQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999877777766665432   2578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.++ ..|+||++||..+..+.+...+|+++|
T Consensus        78 ~id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  155 (252)
T PRK07677         78 RIDALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  155 (252)
T ss_pred             CccEEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHH
Confidence            99999999996532  356788999999999999999999999999998664 368999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCc
Q 044923          172 HGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSP  203 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~  203 (214)
                      +|++.|+++++.|+.+ +||+|++|+||+++|+
T Consensus       156 aa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        156 AGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             HHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence            9999999999999975 6999999999999964

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.9e-37  Score=243.95  Aligned_cols=183  Identities=31%  Similarity=0.396  Sum_probs=166.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|+++||||+||||++++++|+++|++|++++|+.+.+++...         .++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---------~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---------LGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---------CCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            57999999999999999999999999999999998765543321         136789999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|
T Consensus        73 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (273)
T PRK06182         73 GRIDVLVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATK  150 (273)
T ss_pred             CCCCEEEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHH
Confidence            999999999998643  356788999999999999999999999999999988889999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +++++|+++++.|+.+.||+|++|+||+++|++.
T Consensus       151 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        151 FALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             HHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence            9999999999999999999999999999999975

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=240.79  Aligned_cols=189  Identities=26%  Similarity=0.378  Sum_probs=168.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...   . ++.++.+|++|++++.++++++.+++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA---A-RVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC---C-eeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999987766655554321   1 578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++|||||..... ....+.+.++|+.++++|+.|++.+++.++|.|.+++.++||++||..+..+.+....|++||+
T Consensus        78 ~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~  156 (257)
T PRK07024         78 LPDVVIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKA  156 (257)
T ss_pred             CCCEEEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHH
Confidence            999999999986432 2223367899999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++.|+++++.|+.++||+|++|+||.++|++..
T Consensus       157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  190 (257)
T PRK07024        157 AAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA  190 (257)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh
Confidence            9999999999999999999999999999999865

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.9e-37  Score=264.44  Aligned_cols=192  Identities=32%  Similarity=0.540  Sum_probs=173.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      ..+.++++|++|+++++++++++.+
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   75 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG------PDHHALAMDVSDEAQIREGFEQLHR   75 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEeccCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999998877766655542      2467899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCC-eEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|+||||||...+...++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||..+..+.+.+..|+
T Consensus        76 ~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~  155 (520)
T PRK06484         76 EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYS  155 (520)
T ss_pred             HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHH
Confidence            9999999999999854433456788999999999999999999999999999876655 999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|+.+.||+|++|+||+++|++..+
T Consensus       156 asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        156 ASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh
Confidence            999999999999999999999999999999999998754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=8.3e-37  Score=242.01  Aligned_cols=192  Identities=19%  Similarity=0.260  Sum_probs=165.5

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSK----HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++||||++|||+++|++|++    +|++|++++|+.+.+++..+++..... ...+.++++|++|+++++++++++.+.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERS-GLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCC-CceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            689999999999999999997    799999999998888877777754221 235788999999999999999999988


Q ss_pred             cCCc----cEEEeCCcccCCCCCCCCC-CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccCCCC
Q 044923           91 YGKL----DIMFNNAGIVDEAKPNILD-NDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIGGVT  163 (214)
Q Consensus        91 ~g~i----d~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~  163 (214)
                      +|.+    |+||||||..........+ .+.++|++.+++|+.+++.+++.++|.|.+++  .++||++||..+..+.+.
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence            7643    6999999976432122232 35789999999999999999999999998653  479999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +..|+++|+|++.|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  204 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ  204 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH
Confidence            99999999999999999999999999999999999999998764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=240.14  Aligned_cols=194  Identities=29%  Similarity=0.464  Sum_probs=176.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|++++.++++++.+
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG---GAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999877777766665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||+|...+  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.+++.+|++
T Consensus        85 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (256)
T PRK06124         85 EHGRLDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPA  162 (256)
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHH
Confidence            99999999999998643  3567888999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.+++.++.|+.+.||+|++|+||+++|++....
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~  201 (256)
T PRK06124        163 AKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM  201 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh
Confidence            999999999999999999999999999999999986543

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-36  Score=266.35  Aligned_cols=194  Identities=29%  Similarity=0.409  Sum_probs=176.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..++++++|||||+||||+++|++|+++|++|++++|+.+.++++.+.+.....   ++.+++||++|++++.++++++.
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA---VAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998888777777654332   57889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+|++|++|||||....  .++.+.+.++|++++++|+.|++.+++.++|.|.+++ .|+||++||.++..+.+....|
T Consensus       388 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  465 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAY  465 (582)
T ss_pred             HhcCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHH
Confidence            999999999999998653  3567889999999999999999999999999998876 4899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|+++++.|+.++||+|++|+||+++|++.+.
T Consensus       466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  505 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVAT  505 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhc
Confidence            9999999999999999999999999999999999998664

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=239.14  Aligned_cols=193  Identities=26%  Similarity=0.440  Sum_probs=169.1

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |..+++||++|||||++|||+++|++|+++|++|++++|+++.. +..+++....   .++.++.+|+++++++.+++++
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   76 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ---PRAEFVQVDLTDDAQCRDAVEQ   76 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC---CceEEEEccCCCHHHHHHHHHH
Confidence            34568999999999999999999999999999999999987665 4445554332   2578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.++++|++|||||.....  .+... .++|++.+++|+.+++.+++.++|.+++. .++||++||..+..+.+.+..
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~--~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~  152 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVNDGV--GLEAG-REAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSG  152 (258)
T ss_pred             HHHhcCCCCEEEECCcccCCC--cccCC-HHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCch
Confidence            999999999999999975432  33444 48999999999999999999999998765 489999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|++++.+++.++.|+.++||+|+.|+||.++|++.+.
T Consensus       153 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~  193 (258)
T PRK08628        153 YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN  193 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence            99999999999999999999999999999999999998654

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=4.2e-36  Score=241.58  Aligned_cols=194  Identities=28%  Similarity=0.455  Sum_probs=172.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~   79 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG---AEVLGVRTDVSDAAQVEALADAALE   79 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998877777666665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC------CeEEEecCCCcccCCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR------GSIISTASVCGVIGGVT  163 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------g~iv~~sS~~~~~~~~~  163 (214)
                      .+|++|+||||||...+  .++.+.+.++|+..+++|+.|++.+++.++|.|.+++.      ++||++||.++..+.+.
T Consensus        80 ~~g~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  157 (287)
T PRK06194         80 RFGAVHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA  157 (287)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC
Confidence            99999999999999754  35677889999999999999999999999999987654      79999999999999899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHcc--CCcEEEEEeCCcccCcccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGR--FGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~--~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ...|+++|++++.|+++++.|+..  .+|+++.++||++.|++....
T Consensus       158 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~  204 (287)
T PRK06194        158 MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE  204 (287)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence            999999999999999999999874  579999999999999987543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=238.75  Aligned_cols=190  Identities=38%  Similarity=0.585  Sum_probs=170.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+.+|++|||||++|||+++|+.|+++|++|++++|+.+..+...+.+.      .++.++++|++|++++.++++++.+
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG------PAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998877666555442      1467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|++|||||...+  .++.+.+.++|+..+++|+.+++.+++.+++.|.+++ .++||++||..+..+.+.+.+|+
T Consensus        77 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  154 (257)
T PRK07067         77 RFGGIDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYC  154 (257)
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhh
Confidence            99999999999998643  3567788999999999999999999999999997653 47999999999888999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||++++.|+++++.|+.++||+|++|.||+++|+++..
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~  193 (257)
T PRK07067        155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ  193 (257)
T ss_pred             hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence            999999999999999999999999999999999998653

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-36  Score=237.63  Aligned_cols=184  Identities=29%  Similarity=0.426  Sum_probs=165.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.      ..  .   ...+.++++|++|++++.++++++.+
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~--~---~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TV--D---GRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hh--c---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998643      11  1   12577899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.++ +.|+||++||..+..+.+.+..|+
T Consensus        72 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~  149 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYG  149 (252)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhH
Confidence            99999999999997643  346778899999999999999999999999999865 458999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|++.++.|+.++ |++++|+||+++|++...
T Consensus       150 ~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~  187 (252)
T PRK07856        150 AAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSEL  187 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhh
Confidence            99999999999999999987 999999999999998654

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-36  Score=237.14  Aligned_cols=191  Identities=36%  Similarity=0.602  Sum_probs=169.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+. .+..+++..     .++..+++|+++++++.++++++.
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLG-----GNAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhC-----CceEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998653 222222221     245689999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+.+..|+
T Consensus        85 ~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  162 (255)
T PRK06841         85 SAFGRIDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYC  162 (255)
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHH
Confidence            999999999999998643  345677899999999999999999999999999888789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.+++.++.|++++||+|++|+||+++|++.++
T Consensus       163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK  201 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence            999999999999999999999999999999999998654

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=238.51  Aligned_cols=190  Identities=25%  Similarity=0.445  Sum_probs=173.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||+||||++++++|+++|++|++++|+.+.+++..+.+....   .++.++++|++|++++.++++++.+.+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG---GDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999999887777776665432   25778999999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|+||||||...+.  .+.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+....|+++|++
T Consensus        78 id~lI~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa  155 (270)
T PRK05650         78 IDVIVNNAGVASGG--FFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAG  155 (270)
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHH
Confidence            99999999987543  4678889999999999999999999999999988878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++|+++++.|+.+.||++++|+||+++|++....
T Consensus       156 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        156 VVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence            99999999999999999999999999999987654

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-36  Score=237.07  Aligned_cols=192  Identities=38%  Similarity=0.638  Sum_probs=168.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||+++||||++|||.+++++|+++|++|++++|+.+..+...+++.        ..++++|++|+++++++++++.+
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~   75 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------GLFVPTDVTDEDAVNALFDTAAE   75 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------CcEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998765555444331        25788999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-CCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~y~  168 (214)
                      .++++|++|||||...+...++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+ ++..|+
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~  155 (255)
T PRK06057         76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYT  155 (255)
T ss_pred             HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchH
Confidence            9999999999999875433456678899999999999999999999999999887788999999987776653 678899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++|+++..+++.++.++.++||+|++|+||+++|++....+
T Consensus       156 ~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~  196 (255)
T PRK06057        156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELF  196 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhc
Confidence            99999999999999999999999999999999999876543

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-36  Score=237.16  Aligned_cols=193  Identities=27%  Similarity=0.372  Sum_probs=172.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|+++||||++|||+++|+.|+++|++|++++|+++..++..+++....   .++.++.+|++|++++..+++++.+
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG---RRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC---CceEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999877777666665332   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+. .++.+.+.++|++.+++|+.+++.+++.+.+.|.+.+ ++||++||..+..+.+++..|++
T Consensus        79 ~~g~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~  156 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKM  156 (258)
T ss_pred             HcCCccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHH
Confidence            999999999999986443 3466788999999999999999999999999997653 79999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.+++.++.|++++||++++++||++.|++...
T Consensus       157 sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~  194 (258)
T PRK07890        157 AKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG  194 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH
Confidence            99999999999999999999999999999999998653

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=245.85  Aligned_cols=195  Identities=22%  Similarity=0.298  Sum_probs=166.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..... ..++.++.+|++|.++++++++++.
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP-GADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998777666666553321 1357889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc---------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---------  159 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  159 (214)
                      +.++++|+||||||...+.    ...+.++++..+++|+.|++.+++.++|.|++.+.++||++||.++..         
T Consensus        91 ~~~~~iD~li~nAg~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTP----KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCccccCC----CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            9999999999999986432    345667899999999999999999999999988778999999986543         


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEE--eCCcccCcccccc
Q 044923          160 ----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV--SPYAVSSPMAKGF  208 (214)
Q Consensus       160 ----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v--~Pg~v~t~~~~~~  208 (214)
                          +.+...+|++||++++.|++.++.++++.|++++++  +||+++|++.+.+
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence                233456899999999999999999998888877655  6999999987654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.1e-36  Score=235.47  Aligned_cols=192  Identities=26%  Similarity=0.370  Sum_probs=168.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|+++||||++|||+++|++|+++|++|++.. ++....++..+++....   ..+..+.+|++|.+++.++++++.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG---FDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999988754 44444444444443322   3567789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|++
T Consensus        78 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~  155 (246)
T PRK12938         78 EVGEIDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYST  155 (246)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHH
Confidence            99999999999998643  3567889999999999999999999999999998887889999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|+.+.||++++|+||++.|++...
T Consensus       156 sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        156 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh
Confidence            99999999999999999999999999999999998654

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=232.30  Aligned_cols=196  Identities=24%  Similarity=0.265  Sum_probs=172.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC--HHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK--EKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--~~~~~~~~~~~   87 (214)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.+..+...+++.....  ..+.++++|+++  .+++.++++++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH--PEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC--CCcceEEeeecccchHHHHHHHHHH
Confidence            37889999999999999999999999999999999998877777666654322  245778999986  56889999999


Q ss_pred             HHHc-CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           88 VSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        88 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      .+.+ +++|++|||||...+. .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+++|+++|..+..+.+....
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HHHhCCCCCEEEEeccccccC-CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccc
Confidence            9988 8999999999976432 3567889999999999999999999999999998887899999999999999898999


Q ss_pred             chhhHHHHHHHHHHHHHHHccC-CcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRF-GIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|++++.|+++++.|+.++ +|+|++|+||+++|++..+.
T Consensus       160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~  202 (239)
T PRK08703        160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS  202 (239)
T ss_pred             hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc
Confidence            9999999999999999999886 69999999999999986654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=237.89  Aligned_cols=183  Identities=28%  Similarity=0.495  Sum_probs=164.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++++.+..+.            .++.++++|++|+++++++++++.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH------------ENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987754321            1467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCC-------CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAK-------PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV  162 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~-------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  162 (214)
                      .++++|++|||||...+..       .+..+.+.++|++++++|+.+++.+++.+.|+|.+++.++||++||..+..+.+
T Consensus        74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~  153 (266)
T PRK06171         74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE  153 (266)
T ss_pred             HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC
Confidence            9999999999999764321       123467899999999999999999999999999988789999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc-Ccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS-SPM  204 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~-t~~  204 (214)
                      ....|+++|++++.|+++++.|++++||+||+|+||++. |++
T Consensus       154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~  196 (266)
T PRK06171        154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGL  196 (266)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCC
Confidence            999999999999999999999999999999999999997 555

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-36  Score=236.67  Aligned_cols=193  Identities=34%  Similarity=0.541  Sum_probs=168.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+ .++..+++....   .++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG---HRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999864 333333343221   2567899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y~  168 (214)
                      .++++|++|||||....  .++.+.+.++|++.+++|+.+++.+.+.++|++.+.+.++||++||..+. .+.+.+..|+
T Consensus        79 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~  156 (263)
T PRK08226         79 KEGRIDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYA  156 (263)
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHH
Confidence            99999999999998643  35678889999999999999999999999999987777899999998774 5667889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|++++.++++++.|+.++||+|++|+||.++|++.+..
T Consensus       157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~  196 (263)
T PRK08226        157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESI  196 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhh
Confidence            9999999999999999999999999999999999987643

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.7e-36  Score=244.52  Aligned_cols=187  Identities=20%  Similarity=0.278  Sum_probs=163.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.       .+.++++|++|.++++++++++.+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-------~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-------GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-------hCeEEEccCCCHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999877666555542       267899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc----------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI----------  159 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------  159 (214)
                      .++++|+||||||...+.    ...+.++|+..+++|+.+++.+++.++|.|++.+.++||++||.++..          
T Consensus        96 ~~~~iD~li~nAg~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~  171 (315)
T PRK06196         96 SGRRIDILINNAGVMACP----ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHF  171 (315)
T ss_pred             cCCCCCEEEECCCCCCCC----CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCc
Confidence            999999999999986421    345677899999999999999999999999888778999999976532          


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          160 --GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       160 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                        +.+.+..|++||++++.|++.++.++.+.||+|++|+||++.|++.+.
T Consensus       172 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~  221 (315)
T PRK06196        172 TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRH  221 (315)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcccc
Confidence              234456899999999999999999999999999999999999998654

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1e-35  Score=235.78  Aligned_cols=189  Identities=31%  Similarity=0.471  Sum_probs=167.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|++|||||++|||++++++|+++|++|+++.+ +.+..+...+++....   .++.++.+|++|+++++++++++.+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG---VRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999988865 4455555555554432   257889999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhh
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +++|++|||+|....  .++.+.+.++|++++++|+.+++.+.+++.++|.+++ .|+||++||..+..+.++...|+++
T Consensus        79 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  156 (256)
T PRK12743         79 GRIDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAA  156 (256)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHH
Confidence            999999999998654  3467789999999999999999999999999997653 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |++++.++++++.++.++||++++|+||+++|++..
T Consensus       157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~  192 (256)
T PRK12743        157 KHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG  192 (256)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc
Confidence            999999999999999999999999999999999754

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=9.6e-36  Score=233.11  Aligned_cols=181  Identities=17%  Similarity=0.204  Sum_probs=159.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||+++|++|+++|++|++++|+.+..   .+.+...     .+.++.+|++|++++.++++++.+.++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQA-----GAQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHc-----CCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            58999999999999999999999999999999987543   2223221     257789999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccCCCCCccchhh
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      ++|++|||||...+.  ...+.+.++|++++++|+.+++.+++.++|.|.+++  .++||++||..+..+.+.+.+|+++
T Consensus        74 ~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~as  151 (236)
T PRK06483         74 GLRAIIHNASDWLAE--KPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAAS  151 (236)
T ss_pred             CccEEEECCccccCC--CcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHH
Confidence            999999999976433  345678999999999999999999999999998765  6899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      |+++++|+++++.|+++ +|+||+|+||++.|+.
T Consensus       152 Kaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~  184 (236)
T PRK06483        152 KAALDNMTLSFAAKLAP-EVKVNSIAPALILFNE  184 (236)
T ss_pred             HHHHHHHHHHHHHHHCC-CcEEEEEccCceecCC
Confidence            99999999999999987 5999999999997754

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=236.88  Aligned_cols=191  Identities=21%  Similarity=0.302  Sum_probs=169.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.++...+.+....   .++.++.+|++|++++.++++++.
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~i~~~~~~~~   81 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG---PEGLGVSADVRDYAAVEAAFAQIA   81 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CceEEEECCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998877666655555432   246788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.+.+..|+
T Consensus        82 ~~~~~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~  158 (264)
T PRK07576         82 DEFGPIDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVC  158 (264)
T ss_pred             HHcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHH
Confidence            999999999999997543  356788899999999999999999999999999765 48999999999888899999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc-Cccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS-SPMA  205 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~-t~~~  205 (214)
                      ++|++++.|+++++.|+.++||+|++|+||++. |+..
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~  196 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM  196 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH
Confidence            999999999999999999999999999999997 6543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=9.6e-37  Score=239.64  Aligned_cols=183  Identities=31%  Similarity=0.543  Sum_probs=165.0

Q ss_pred             cCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc-CCccE
Q 044923           20 GGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY-GKLDI   96 (214)
Q Consensus        20 Gas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   96 (214)
                      |++  +|||+++|++|+++|++|++++|+.+.+++..+++....+    ..++++|++++++++++++++.+.+ |++|+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~----~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~   76 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG----AEVIQCDLSDEESVEALFDEAVERFGGRIDI   76 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT----SEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC----CceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence            666  9999999999999999999999999886666666655433    3469999999999999999999999 99999


Q ss_pred             EEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           97 MFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        97 li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      ||||+|...+  ...++.+.+.++|.+.+++|+.+++.+++.+.|+|++.  |+||++||..+..+.+.+..|+++|+|+
T Consensus        77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal  154 (241)
T PF13561_consen   77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAAL  154 (241)
T ss_dssp             EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHH
T ss_pred             EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHH
Confidence            9999998765  23567888999999999999999999999999988875  7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHcc-CCcEEEEEeCCcccCcccccc
Q 044923          175 VGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       175 ~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|+|+++.||++ +|||||+|+||++.|++.+..
T Consensus       155 ~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~  189 (241)
T PF13561_consen  155 EGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI  189 (241)
T ss_dssp             HHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH
T ss_pred             HHHHHHHHHHhccccCeeeeeecccceeccchhcc
Confidence            9999999999999 999999999999999986543

...

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=235.50  Aligned_cols=193  Identities=22%  Similarity=0.341  Sum_probs=166.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcc-hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      -++|+++||||++|||+++|++|+++| ++|++++|+++. ++++.+++.....  .++.++++|++|++++.++++++.
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGA--SSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCC--CceEEEEecCCChHHHHHHHHHHH
Confidence            357899999999999999999999995 999999998875 6766666655322  257889999999999999999988


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      + ++++|++|||+|...+...  ...+.++..+.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|+
T Consensus        84 ~-~g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~  160 (253)
T PRK07904         84 A-GGDVDVAIVAFGLLGDAEE--LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYG  160 (253)
T ss_pred             h-cCCCCEEEEeeecCCchhh--cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchH
Confidence            6 5899999999998643211  112455667899999999999999999999998889999999999888888888999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+++.+|+++++.|+.++||+|++|+||+++|++....
T Consensus       161 ~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        161 STKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA  200 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC
Confidence            9999999999999999999999999999999999987654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.6e-36  Score=234.78  Aligned_cols=192  Identities=26%  Similarity=0.337  Sum_probs=170.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEE-EecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.+|+++||||++|||+++++.|+++|++|++ ..|+.+..+++.+++....   .++.++.+|++|++++.++++++.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG---RKALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999776 4677766666666655432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|+||||||....  .++.+.+.++|+..+++|+.+++.++++++|.|.+++.++||++||..+..+.+....|++
T Consensus        79 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  156 (250)
T PRK08063         79 EFGRLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGV  156 (250)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHH
Confidence            99999999999997643  3567889999999999999999999999999999888899999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.++.+.||++++|+||++.|++...
T Consensus       157 sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        157 SKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence            99999999999999999999999999999999998654

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=234.26  Aligned_cols=194  Identities=33%  Similarity=0.566  Sum_probs=174.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+...+.+. .   ..++.++++|++|+++++++++++.+
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-A---GGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-c---CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999876666555554 1   13578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +++++|++|||+|...+  ..+.+.+.++++..+++|+.+++.+.+.+++.|++++.++|+++||..+..+.+....|++
T Consensus        78 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  155 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVA  155 (252)
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHH
Confidence            99999999999998654  3467788999999999999999999999999999888889999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|++++.++++++.|+.++||++++++||.+.|++..+.+
T Consensus       156 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~  195 (252)
T PRK06138        156 SKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIF  195 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhh
Confidence            9999999999999999999999999999999999876543

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=236.77  Aligned_cols=184  Identities=27%  Similarity=0.433  Sum_probs=167.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..+..           .++.++++|++|+++++++++.+.+.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-----------PGVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-----------CCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999986543210           246789999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      |++|+||||||....  .++.+.+.+++++.+++|+.|++.+++.++|+|++++.++||++||..+..+.|....|+++|
T Consensus        72 g~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  149 (270)
T PRK06179         72 GRIDVLVNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASK  149 (270)
T ss_pred             CCCCEEEECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHH
Confidence            999999999998654  356778999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++++.|++.++.|+++.||++++|+||++.|++....
T Consensus       150 ~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        150 HAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence            9999999999999999999999999999999987654

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=236.41  Aligned_cols=187  Identities=28%  Similarity=0.318  Sum_probs=167.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++.+.+..    .  .++..+.+|++|++++.++++++.+.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~----~--~~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH----P--DRALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc----C--CCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999876654443321    1  246788999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|++|||||....  .+..+.+.++|++++++|+.|++.+.+.++|+|++++.++||++||.++..+.+++..|+++|
T Consensus        77 ~~~d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK  154 (277)
T PRK06180         77 GPIDVLVNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSK  154 (277)
T ss_pred             CCCCEEEECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHH
Confidence            999999999998643  356788899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++++.++++++.|+.+.|+++++|+||.+.|++..
T Consensus       155 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        155 FALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence            99999999999999999999999999999998754

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=231.85  Aligned_cols=194  Identities=27%  Similarity=0.425  Sum_probs=175.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+++..+...+.+....   .++.++++|++|++++.++++++.
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   79 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG---GRAHAIAADLADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            44789999999999999999999999999999999998877776666664332   357889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||+|...+  .++.+.+.++|+..+++|+.+++.+.+.+.|.+.+++.|++|++||..+..+.+....|+
T Consensus        80 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  157 (250)
T PRK12939         80 AALGGLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYV  157 (250)
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHH
Confidence            999999999999998754  346778899999999999999999999999999888789999999999998989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.+++.++.++.+++|+++.|+||+++|++.+.
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        158 ASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY  196 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence            999999999999999999999999999999999998754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-35  Score=233.44  Aligned_cols=192  Identities=21%  Similarity=0.278  Sum_probs=166.6

Q ss_pred             ccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCC-----------cchhhHHHHhhccCCCCCCceEEEeeCCC
Q 044923           10 RLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKD-----------DLGESVCEDISSSSSSANGCSYVHCDVTK   76 (214)
Q Consensus        10 ~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   76 (214)
                      .+++|++|||||++  |||.+++++|+++|++|++++|++           .......+++...   ..++.++++|+++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~   78 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY---GVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc---CCeEEEEECCCCC
Confidence            46789999999995  999999999999999999998872           1111122333222   1257889999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           77 EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        77 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      ++++.++++++.+.++++|++|||||....  .++.+.+.++|++.+++|+.+++.+.+.+.|.|.+...+++|++||..
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~  156 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQ  156 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCcc
Confidence            999999999999999999999999998643  356778899999999999999999999999999887788999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          157 GVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       157 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +..+.+.+..|+++|++++.++++++.|+.+.||+|++++||+++|++..
T Consensus       157 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        157 SLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence            88888889999999999999999999999999999999999999998654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=233.57  Aligned_cols=191  Identities=29%  Similarity=0.494  Sum_probs=169.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||.+++++|+++|++|++++|+.+..+...+.+....+ ..++.++.+|++|++++.++++++.+.++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG-EGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC-CceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999988777666665543321 12478899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|++|||||...+  .++.+.+.++|++.+++|+.+++.+.+.++|.|.+++ .++||++||..+..+.+...+|+++|
T Consensus        81 ~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  158 (259)
T PRK12384         81 RVDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAK  158 (259)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHH
Confidence            99999999998654  3567889999999999999999999999999998776 68999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcc-cCcccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAV-SSPMAK  206 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~  206 (214)
                      +|++.++++++.|+.++||+|++|+||.+ .|++..
T Consensus       159 aa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~  194 (259)
T PRK12384        159 FGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ  194 (259)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh
Confidence            99999999999999999999999999975 666654

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=233.83  Aligned_cols=191  Identities=27%  Similarity=0.412  Sum_probs=171.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+..+++.+.+....   .++.++.+|+++++++.++++++.+
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG---RRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877777666665432   2577889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-CCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP-AGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|++|||||...+  ..+.+.+.++|+.++++|+.+++.+.+.+.|.|.+ .+.+++|++||..+..+.++...|+
T Consensus        84 ~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  161 (263)
T PRK07814         84 AFGRLDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYG  161 (263)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhH
Confidence            99999999999997643  34677889999999999999999999999999977 4678999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++|++++.++++++.|+.+ +|++++|+||++.|++..
T Consensus       162 ~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~  198 (263)
T PRK07814        162 TAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE  198 (263)
T ss_pred             HHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence            9999999999999999987 699999999999998754

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=234.98  Aligned_cols=187  Identities=27%  Similarity=0.332  Sum_probs=169.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+|+++||||+||||++++++|+++|++|++++|+.+.++++.+...      ..+.++++|++|++++.++++++.+.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG------DRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc------CCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999999999999998776655444321      246788999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.++|.|++++.+++|++||..+..+.+....|+++|
T Consensus        76 ~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (275)
T PRK08263         76 GRLDIVVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASK  153 (275)
T ss_pred             CCCCEEEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHH
Confidence            999999999998754  356788999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++++.+++.++.|+.+.||+|+.++||++.|++..
T Consensus       154 aa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        154 WALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            99999999999999999999999999999999874

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=236.71  Aligned_cols=178  Identities=29%  Similarity=0.411  Sum_probs=153.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++||||+ +|||+++|++|+ +|++|++++|+.+.+++..+++....   .++.++++|++|++++.++++++ ++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~i~~~~~~~-~~~g   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG---FDVSTQEVDVSSRESVKALAATA-QTLG   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEeecCCHHHHHHHHHHH-HhcC
Confidence            589999998 699999999996 89999999998877766666664422   25788999999999999999988 5689


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  161 (214)
                      ++|+||||||...         ..++|++++++|+.+++.+++.+.|.|.++  +++|++||..+..+.           
T Consensus        76 ~id~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         76 PVTGLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             CCCEEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccc
Confidence            9999999999742         236799999999999999999999999754  668899998876542           


Q ss_pred             -------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          162 -------------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       162 -------------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                                         +.+..|++||+|+..++++++.|+.++||+||+|+||+++|++..+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~  209 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD  209 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence                               2467899999999999999999999999999999999999998754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.8e-37  Score=221.20  Aligned_cols=192  Identities=24%  Similarity=0.289  Sum_probs=168.9

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |..++.|+.+++||+..|||+++++.|++.|++|+...|+++.+..+.++...      -+.-+..|+++++.+.+.+. 
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~------~I~Pi~~Dls~wea~~~~l~-   73 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS------LIIPIVGDLSAWEALFKLLV-   73 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc------ceeeeEecccHHHHHHHhhc-
Confidence            56789999999999999999999999999999999999999888777665432      36778899999777666554 


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~  165 (214)
                         ..+.+|.++||||+...  .++.+.+.+++++.|++|+.+.+..+|...+-+..+ ..|.||++||.++..+..+..
T Consensus        74 ---~v~pidgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHt  148 (245)
T KOG1207|consen   74 ---PVFPIDGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHT  148 (245)
T ss_pred             ---ccCchhhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCce
Confidence               34689999999999754  478999999999999999999999999866655443 478899999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      .||++|+|+++++|+++.|+++.+||||+|.|-.+.|+|.+.-+.
T Consensus       149 vYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS  193 (245)
T KOG1207|consen  149 VYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS  193 (245)
T ss_pred             EEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC
Confidence            999999999999999999999999999999999999999887765

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3e-35  Score=239.63  Aligned_cols=191  Identities=18%  Similarity=0.191  Sum_probs=161.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|+++||||++|||+++|+.|+++| ++|++++|+.+..++..+++...   ...+.++.+|++|.++++++++++.+.+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP---KDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999 99999999987777666665422   1256788999999999999999999889


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccC---------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIG---------  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~---------  160 (214)
                      +++|++|||||...+. ....+.+.++|+.++++|+.+++.+++.++|+|++++  .++||++||..+..+         
T Consensus        80 ~~iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        80 RPLDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCCCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence            9999999999986432 1234568899999999999999999999999998764  589999999876421         


Q ss_pred             ------------------------CCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCcc-cCccccc
Q 044923          161 ------------------------GVTSHAYTSSKHGVVGLMKNTAVELG-RFGIRVNCVSPYAV-SSPMAKG  207 (214)
Q Consensus       161 ------------------------~~~~~~y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~Pg~v-~t~~~~~  207 (214)
                                              ...+.+|++||+|+..+++.++.++. +.||+|++|+||.| .|++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence                                    12356799999999999999999985 46999999999999 6998654

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-35  Score=231.60  Aligned_cols=191  Identities=28%  Similarity=0.420  Sum_probs=163.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|++|||||++|||+++++.|+++|++|+++.++ .+..+.....+    .  .++.++.+|++|++++.++++++.
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----G--DRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----C--CceEEEEcCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999887654 33333333222    1  257889999999999999999999


Q ss_pred             HHcCC-ccEEEeCCcccCC----CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           89 SQYGK-LDIMFNNAGIVDE----AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        89 ~~~g~-id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      +.++. +|++|||||....    ...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+.
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  155 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP  155 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC
Confidence            99987 9999999986421    123467888999999999999999999999999998777799999999887777777


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +..|+++|+++++|++.++.++.+.||+||+|+||+++|+...
T Consensus       156 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~  198 (253)
T PRK08642        156 YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS  198 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence            8899999999999999999999999999999999999998643

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-35  Score=235.10  Aligned_cols=193  Identities=31%  Similarity=0.460  Sum_probs=169.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+....   .++.++.+|++|.++++++++++
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG---VKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998754 3344444443221   35778999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.++++|++|||||...+. .++.+.+.++|...+++|+.+++.+++++++.|++  .++||++||..+..+.+....|
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y  195 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDY  195 (290)
T ss_pred             HHHcCCCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchh
Confidence            99999999999999986432 34678899999999999999999999999999965  3789999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|+|++.|+++++.++.++||+|++|+||+++|++...
T Consensus       196 ~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        196 SATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence            9999999999999999999999999999999999997653

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-35  Score=233.91  Aligned_cols=190  Identities=24%  Similarity=0.347  Sum_probs=168.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++.....  ..+.++.+|++|+++++++++++.+.+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG--TVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999988777766666654322  13456789999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      +|++|||+|....  .++.+.+.++|+..+++|+.+++.+++.++|.|.++ ..++||++||..+..+.+.+..|+++|+
T Consensus        79 id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  156 (272)
T PRK07832         79 MDVVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKF  156 (272)
T ss_pred             CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHH
Confidence            9999999998643  356788999999999999999999999999999764 3589999999998888999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++.+|+++++.|+.++||+|+.|+||.++|++.++
T Consensus       157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        157 GLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhc
Confidence            99999999999999999999999999999998664

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-35  Score=239.16  Aligned_cols=190  Identities=27%  Similarity=0.368  Sum_probs=169.5

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..++.+++++||||++|||+++|++|+++|++|++..|+.+..++..+++...... .++.+++||+++.+++.++.+++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~-~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKAN-QKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEECCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999999999999874333 36888999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-------  160 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------  160 (214)
                      ++.++++|++|||||++.+.    ...+.|.++.+|.+|++|+|.+++.++|.|+++..+|||++||..+...       
T Consensus       109 ~~~~~~ldvLInNAGV~~~~----~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~  184 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPP----FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLS  184 (314)
T ss_pred             HhcCCCccEEEeCcccccCC----cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhcc
Confidence            99999999999999998754    2557788999999999999999999999999988799999999876110       


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          161 ------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       161 ------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                            +....+|+.||.+...+++.|++.+.+ ||++++++||.+.|+
T Consensus       185 ~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~  232 (314)
T KOG1208|consen  185 GEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTT  232 (314)
T ss_pred             chhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCccccc
Confidence                  222335999999999999999999987 999999999999999

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-35  Score=231.21  Aligned_cols=195  Identities=38%  Similarity=0.598  Sum_probs=175.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||.++++.|+++|++|++++|+.+..++....+..    ..++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA----GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999998777666665543    12578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+....|+.
T Consensus        78 ~~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  156 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNA  156 (251)
T ss_pred             HhCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHH
Confidence            999999999999985432 3467788999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|++++.+++.++.++++.||++++++||++.|++.....
T Consensus       157 sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~  196 (251)
T PRK07231        157 SKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM  196 (251)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh
Confidence            9999999999999999999999999999999999876544

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-35  Score=231.92  Aligned_cols=195  Identities=31%  Similarity=0.463  Sum_probs=173.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+.++++...+....   .++.++.+|+++++++.++++++.
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG---GAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999887777766654432   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--------CCeEEEecCCCcccC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--------RGSIISTASVCGVIG  160 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~  160 (214)
                      +.++++|++|||+|....  .++.+.+.++|+.++++|+.+++.+++.++|.|.++.        .+++|++||..+..+
T Consensus        82 ~~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  159 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV  159 (258)
T ss_pred             HhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence            999999999999998643  3466778899999999999999999999999987653        479999999999888


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+...+|+++|++++.+++.++.++.++||+|++|+||+++|++....
T Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~  207 (258)
T PRK06949        160 LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHH  207 (258)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhc
Confidence            888999999999999999999999999999999999999999987643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.1e-35  Score=228.52  Aligned_cols=194  Identities=32%  Similarity=0.501  Sum_probs=174.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++....   .++.++.+|+++++++.++++++.
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG---VKVVIATADVSDYEEVTAAIEQLK   79 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---CeEEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999877766666654322   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||+|....  ..+.+.+.++|++.+++|+.+++.+.+.+.|.+.+++.+++|++||..+..+.+....|+
T Consensus        80 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  157 (239)
T PRK07666         80 NELGSIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYS  157 (239)
T ss_pred             HHcCCccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchH
Confidence            999999999999998643  346678899999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|+++..+++.++.|+.+.||+++.|.||.+.|++...
T Consensus       158 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~  196 (239)
T PRK07666        158 ASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD  196 (239)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh
Confidence            999999999999999999999999999999999998654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=2.8e-36  Score=235.81  Aligned_cols=192  Identities=26%  Similarity=0.324  Sum_probs=175.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|+|++|||||.|||++.|++||++|.+|++++|++++++.+.+++++...  ..+.++.+|.++.+.+   .+++++..
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~--vev~~i~~Dft~~~~~---ye~i~~~l  122 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK--VEVRIIAIDFTKGDEV---YEKLLEKL  122 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC--cEEEEEEEecCCCchh---HHHHHHHh
Confidence            359999999999999999999999999999999999999999999998866  4688999999998874   33344433


Q ss_pred             --CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           92 --GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        92 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                        .+|.+||||+|...+.+..+.+.+.+.+++.+.+|..+...+++.++|.|.++++|.||+++|.++..|.|.++.|++
T Consensus       123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysa  202 (312)
T KOG1014|consen  123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSA  202 (312)
T ss_pred             cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHH
Confidence              268889999999986666788888889999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+.++.|+++|+.|+.++||.|-++.|+.|.|+|....
T Consensus       203 sK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  203 SKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            999999999999999999999999999999999997644

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=230.43  Aligned_cols=190  Identities=25%  Similarity=0.343  Sum_probs=171.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+....   .++.++++|++|++++.++++++.+.+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG---VKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999877766666655432   257889999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+.|+|.+++.++||++||..+..+.+.+..|+++|
T Consensus        82 ~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (241)
T PRK07454         82 GCPDVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSK  159 (241)
T ss_pred             CCCCEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHH
Confidence            999999999998643  346778899999999999999999999999999888789999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++++.+++.++.|+.+.||++++|.||++.|++..
T Consensus       160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        160 AALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence            99999999999999999999999999999999854

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.9e-36  Score=223.14  Aligned_cols=187  Identities=26%  Similarity=0.346  Sum_probs=167.4

Q ss_pred             CcEEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH-H
Q 044923           13 GKVALITGGA-GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS-Q   90 (214)
Q Consensus        13 ~k~~lItGas-~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   90 (214)
                      -|.++|||++ ||||.++|++|+++|+.|+.+.|+.+...++..+.        .+.....|+++++++.++..++++ .
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~--------gl~~~kLDV~~~~~V~~v~~evr~~~   78 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF--------GLKPYKLDVSKPEEVVTVSGEVRANP   78 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh--------CCeeEEeccCChHHHHHHHHHHhhCC
Confidence            4788898877 69999999999999999999999987766655443        367789999999999999999998 6


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+|+||||..  ...+..+.+.++.+++|++|++|.+++++++. ++.-+.+|.|||+.|..+..|.|..+.|.+|
T Consensus        79 ~Gkld~L~NNAG~~--C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAs  155 (289)
T KOG1209|consen   79 DGKLDLLYNNAGQS--CTFPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSAS  155 (289)
T ss_pred             CCceEEEEcCCCCC--cccccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHH
Confidence            79999999999974  34567899999999999999999999999998 4444457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      |+|++.+++.|+.|+++.||+|..+.||.|.|+...+.++
T Consensus       156 KAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~l~  195 (289)
T KOG1209|consen  156 KAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKRLP  195 (289)
T ss_pred             HHHHHHhhhhcEEeeeccccEEEEecccceecccccCCCc
Confidence            9999999999999999999999999999999999887544

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-35  Score=232.22  Aligned_cols=193  Identities=31%  Similarity=0.477  Sum_probs=173.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..++..+.+....   .++.++++|++|.++++++++++.+
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG---GKAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC---ceEEEEECCCCCHHHHHHHHHHHHH
Confidence            4778999999999999999999999999999999999887777777765432   2567899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhh-ccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|++|||||...+.  +..+.+.++|+..+++|+.+++.+++.+++.+ ++.+.++||++||..+..+.+....|+
T Consensus        81 ~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~  158 (262)
T PRK13394         81 RFGSVDILVSNAGIQIVN--PIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYV  158 (262)
T ss_pred             HcCCCCEEEECCccCCCC--chhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccH
Confidence            999999999999986432  45667889999999999999999999999999 777788999999998888888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.+++.++.++.+.||+++.++||++.|++...
T Consensus       159 ~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~  197 (262)
T PRK13394        159 TAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK  197 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh
Confidence            999999999999999999899999999999999997543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=6.4e-35  Score=230.34  Aligned_cols=187  Identities=25%  Similarity=0.359  Sum_probs=168.4

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.         ....   ...+.++++|++|++++.++++++
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   70 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE---DYPFATFVLDVSDAAAVAQVCQRL   70 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc---CCceEEEEecCCCHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999875         1111   124678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.++++|++|||+|....  .++.+.+.++|++.+++|+.+++.+.+.+.|.|++++.++||++||..+..+.+....|
T Consensus        71 ~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  148 (252)
T PRK08220         71 LAETGPLDVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAY  148 (252)
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchh
Confidence            9999999999999998653  35677889999999999999999999999999988888999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++|++++.|+++++.|+.++||+|+++.||++.|++....
T Consensus       149 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~  189 (252)
T PRK08220        149 GASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTL  189 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhh
Confidence            99999999999999999999999999999999999986544

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=7.7e-35  Score=230.39  Aligned_cols=193  Identities=29%  Similarity=0.441  Sum_probs=165.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.+..++..+++...... ..+.+++||++|++++.++++++.+.
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS-KKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC-CceeEEEecCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999988877777666432221 24567799999999999999999999


Q ss_pred             cCCccEEEeCCcccCCC-CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-------
Q 044923           91 YGKLDIMFNNAGIVDEA-KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-------  162 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------  162 (214)
                      ++++|++|||||..... ..++.+.+.++|...+++|+.+++.++++++|.|++++.++||++||..+..+..       
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence            99999999999865321 2356788999999999999999999999999999988888999999987654311       


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 ---TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 ---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                         ....|+++|+++++|+++++.|+.++||+|+.++||.+.++.
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence               223699999999999999999999999999999999997764

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-35  Score=229.94  Aligned_cols=188  Identities=31%  Similarity=0.434  Sum_probs=166.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.      .++.++++|++|.+++..+++++.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   76 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG------ESALVIRADAGDVAAQKALAQALAE   76 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998765555444431      2467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||....  .++.+.+.++|+.++++|+.+++.+++++.|+|.+  .+++|+++|..+..+.+...+|++
T Consensus        77 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~  152 (249)
T PRK06500         77 AFGRLDAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAA  152 (249)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHH
Confidence            99999999999998643  34567889999999999999999999999999865  367999999888888999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|+.++||++++++||+++|++++.
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~  190 (249)
T PRK06500        153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK  190 (249)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh
Confidence            99999999999999999999999999999999998653

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=6.8e-35  Score=230.46  Aligned_cols=190  Identities=34%  Similarity=0.550  Sum_probs=171.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||++|||.+++++|+++|++|++++|+.+..++..+++....   .++.++.+|++|++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG---GKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999998777766666665432   25788999999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .+++|++||..+..+.+.+..|+++|+
T Consensus        78 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  155 (254)
T TIGR02415        78 FDVMVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKF  155 (254)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHH
Confidence            9999999998643  3567889999999999999999999999999998765 479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++.|++.++.|+.+.||+|+.++||+++|+++++.
T Consensus       156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~  191 (254)
T TIGR02415       156 AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI  191 (254)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhh
Confidence            999999999999999999999999999999987543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-35  Score=229.07  Aligned_cols=192  Identities=23%  Similarity=0.299  Sum_probs=171.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+..... ..++.++++|++|++++.++++++.+.++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC-CceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999998877777666654321 23578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-CccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-SHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-~~~y~~sK  171 (214)
                      ++|++|||||...+.  ++.+.+.+.+++.+++|+.+++.+++.+.|.+++.+.++||++||..+..+.+. ...|+.+|
T Consensus        81 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK  158 (248)
T PRK08251         81 GLDRVIVNAGIGKGA--RLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASK  158 (248)
T ss_pred             CCCEEEECCCcCCCC--CcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHH
Confidence            999999999986543  456678899999999999999999999999998888889999999998888775 68999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.+++.++.++...||++++|+||+++|++.+.
T Consensus       159 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  194 (248)
T PRK08251        159 AGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK  194 (248)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc
Confidence            999999999999999889999999999999998764

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=232.33  Aligned_cols=197  Identities=29%  Similarity=0.363  Sum_probs=174.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||+++++.|+++|++|++++|+.+..+...+++..... ..++.++++|++|++++.++++++.
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-AGAVRYEPADVTDEDQVARAVDAAT   81 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988776666665543321 1357888999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++++++|++|||||...+. .++.+.+.++|..++++|+.+++.+++.+.+.|.+++.++|+++||..+..+.+...+|+
T Consensus        82 ~~~~~~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  160 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETI-GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG  160 (276)
T ss_pred             HHcCCCCEEEECCCcccCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence            9999999999999975432 346678899999999999999999999999999887788999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.+++.++.++.+.||+++.|+||+++|++...
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence            999999999999999999999999999999999998754

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=3.3e-35  Score=238.82  Aligned_cols=187  Identities=18%  Similarity=0.211  Sum_probs=159.1

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           17 LITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        17 lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      |||||++|||++++++|+++| ++|++++|+.+..++..+++...   ..++.++++|++|.++++++++++.+.++++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP---KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC---CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 99999999887776666665422   12577889999999999999999998889999


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccC-------------
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIG-------------  160 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~-------------  160 (214)
                      +||||||...+. .+..+.+.++|+++|++|+.|++.+++.++|.|.+++  .|+||++||..+..+             
T Consensus        78 ~lInnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  156 (308)
T PLN00015         78 VLVCNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG  156 (308)
T ss_pred             EEEECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence            999999986432 2355778999999999999999999999999998775  689999999876421             


Q ss_pred             ----------------------CCCCccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcc-cCccccc
Q 044923          161 ----------------------GVTSHAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAV-SSPMAKG  207 (214)
Q Consensus       161 ----------------------~~~~~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v-~t~~~~~  207 (214)
                                            .+.+.+|++||+|...+++.++.++.+ .||+|++|+||+| .|++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence                                  123567999999988899999999965 6999999999999 7888654

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-35  Score=230.67  Aligned_cols=187  Identities=29%  Similarity=0.422  Sum_probs=169.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH-cC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ-YG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-~g   92 (214)
                      |++|||||++|||++++++|+++|++|++++|+.+.++++.+.+.     ..++.++++|++|.+++.++++.+.+. ++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-----AGNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999998877766655543     125788999999999999999988877 78


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|+||||||...+  ..+.+.+.++++.++++|+.+++.+++.+.++|++++.++||++||..+..+.+....|+.||+
T Consensus        77 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  154 (260)
T PRK08267         77 RLDVLFNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKF  154 (260)
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHH
Confidence            99999999998654  3567788999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++.|+++++.++.+.||++++|.||++.|++.+.
T Consensus       155 a~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        155 AVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence            99999999999999999999999999999998664

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-35  Score=231.28  Aligned_cols=191  Identities=25%  Similarity=0.397  Sum_probs=171.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++++.|+++|++|++++|+.+..++...++. .   ..++.++.+|++|++++.++++.+.+
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~---~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-Y---PGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-c---CCceEEEEccCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999877776666552 1   12578899999999999999998876


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                       ++++|++|||||....  .++.+.+.+++++++++|+.|++.+++.++|+|.+++.+++|++||..+..+.++...|++
T Consensus        78 -~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  154 (263)
T PRK09072         78 -MGGINVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCA  154 (263)
T ss_pred             -cCCCCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHH
Confidence             7899999999998643  3467788999999999999999999999999998887889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|+++..++++++.|+.+.||+|++|+||+++|++...
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~  192 (263)
T PRK09072        155 SKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE  192 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh
Confidence            99999999999999999999999999999999987543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=230.12  Aligned_cols=194  Identities=31%  Similarity=0.518  Sum_probs=169.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||.++|++|+++|++|++++|+.+.++...+.+....   .++.+++||++|+++++++++++.+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~---~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG---IDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998877666666654332   2567899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh-hccCCCCeEEEecCCCcccCCCC----C
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARV-MKPAGRGSIISTASVCGVIGGVT----S  164 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~g~iv~~sS~~~~~~~~~----~  164 (214)
                      .++++|++|||||....  .+..+.+.++|++.+++|+.+++.+.+.+.|+ +.+++.+++|++||..+..+.+.    .
T Consensus        86 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~  163 (259)
T PRK08213         86 RFGHVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDT  163 (259)
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCc
Confidence            99999999999997543  24567788999999999999999999999998 77777789999999887766544    4


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|+++|++++.+++.++.++.++||+++.++||++.|++..+.
T Consensus       164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~  207 (259)
T PRK08213        164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT  207 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh
Confidence            89999999999999999999999999999999999999876543

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=227.56  Aligned_cols=189  Identities=29%  Similarity=0.437  Sum_probs=166.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++||||++|||+++|+.|+++|++|+++.|+.+ ..++..+++....   .++.++.+|++|++++.++++++.
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG---GRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHH
Confidence            578899999999999999999999999999888876543 3444445444322   357889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+  .++||++||..+..+.+.+..|+
T Consensus        79 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~  154 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYA  154 (245)
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhH
Confidence            999999999999998643  35677889999999999999999999999999965  47899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ++|++++.++++++.|+.+.||++++++||+++|++.
T Consensus       155 ~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~  191 (245)
T PRK12937        155 ASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELF  191 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchh
Confidence            9999999999999999999999999999999999985

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-34  Score=228.25  Aligned_cols=192  Identities=32%  Similarity=0.551  Sum_probs=169.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|+++||||++|||.+++++|+++|++|++..+ +.+..++..+.+....   .++.++++|++|++++.++++++.+
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG---HDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            67899999999999999999999999999887654 4444455545554322   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+.  .+.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.+++..|++
T Consensus        81 ~~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  158 (247)
T PRK12935         81 HFGKVDILVNNAGITRDR--TFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSA  158 (247)
T ss_pred             HcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHH
Confidence            999999999999986542  456778899999999999999999999999998877789999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.++++++.|+.+.||+++.++||+++|++...
T Consensus       159 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (247)
T PRK12935        159 AKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE  196 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh
Confidence            99999999999999999999999999999999987654

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=229.61  Aligned_cols=190  Identities=27%  Similarity=0.385  Sum_probs=157.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC----cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD----DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      .+++|+++||||++|||+++|+.|+++|++|+++.++.    +..++..+++....   .++.++++|++|+++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAG---AKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhC---CcEEEEecCcCCHHHHHHHHH
Confidence            47889999999999999999999999999966665433    22333333343321   257789999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.+.++++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.+.|.|.+.  +++++++|.....+.+.+.
T Consensus        82 ~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~~  157 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFYS  157 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCcc
Confidence            999999999999999998643  346778899999999999999999999999999754  5677664333334567888


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|+++|+|++.|+++++.|+.++||+|++++||++.|++..
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~  198 (257)
T PRK12744        158 AYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY  198 (257)
T ss_pred             cchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence            99999999999999999999999999999999999999764

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=232.11  Aligned_cols=182  Identities=28%  Similarity=0.382  Sum_probs=163.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||++|||+++++.|+++|++|++++|+.+..+...+    .     .+.++.+|++|+++++++++++.+.+++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~-----~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----A-----GFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----C-----CCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            789999999999999999999999999999998765443321    1     3567899999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|++|||||....  .++.+.+.++|+..+++|+.|++.+++.++|.|.+. .|+||++||..+..+.+....|+++|++
T Consensus        73 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  149 (274)
T PRK05693         73 LDVLINNAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAA  149 (274)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHH
Confidence            9999999998643  356778999999999999999999999999999754 5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++.|+++++.|+.+.||+|++|+||+++|++.+.
T Consensus       150 l~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        150 VHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            9999999999999999999999999999998764

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=227.57  Aligned_cols=193  Identities=30%  Similarity=0.485  Sum_probs=168.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+++..+.+.+.+....   ..+.++.+|++|.++++++++++.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADG---GTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999998776666666654332   2457889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCC-CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEA-KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|+||||||..... ..++.+.+.++|++.+++|+.+++.+++.++|.+.+.+.++||++||..+..   ....|+
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~  156 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYG  156 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccH
Confidence            999999999999986431 2345677889999999999999999999999999887788999999987653   456899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|++++.++++++.++...||+++.++||.++|++....
T Consensus       157 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        157 LAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc
Confidence            9999999999999999999999999999999999987643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.7e-34  Score=227.83  Aligned_cols=193  Identities=36%  Similarity=0.619  Sum_probs=166.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc--hhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL--GESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNT   86 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~   86 (214)
                      .+++|+++||||++|||+++|+.|+++|++|+++.++.+.  .+...+... .... ..+.+..+|+++ .++++.+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGG-GRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCC-CcEEEEEecCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999998888887654  334433333 1110 256788899998 9999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-Cc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-SH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-~~  165 (214)
                      +.+.+|++|++|||||..... .++.+.+.++|++.+++|+.+++.+++.+.|.++++   +||++||..+. +.+. +.
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~  154 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQA  154 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcc
Confidence            999999999999999987532 257888999999999999999999999888888844   99999999999 8777 49


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|++||+|+.+|++.++.|+.++||+|++|+||++.|++.....
T Consensus       155 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~  198 (251)
T COG1028         155 AYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALE  198 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhh
Confidence            99999999999999999999999999999999999999987543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.3e-34  Score=228.20  Aligned_cols=193  Identities=31%  Similarity=0.504  Sum_probs=173.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+....   .++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG---GNAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999998877766666665432   25788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      ++++|++|||+|....  .++.+.+.++|+..+++|+.+++.+.+.+.+.|.+.+.+++|++||..+..+.+....|+++
T Consensus        78 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~s  155 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAAC  155 (250)
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHH
Confidence            9999999999998543  35677788999999999999999999999999988878899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+|++.++++++.++.+.||+++.++||+++|++....
T Consensus       156 K~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~  193 (250)
T TIGR03206       156 KGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDI  193 (250)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhh
Confidence            99999999999999988899999999999999986554

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.4e-34  Score=227.31  Aligned_cols=190  Identities=29%  Similarity=0.465  Sum_probs=169.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|+.|++.+|+.+.++...+.+.      .++.++.+|++|.+++.++++++.+
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG------ERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998888766655544331      2567889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+.  ++.+.+.++|++++++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|++
T Consensus        77 ~~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  154 (245)
T PRK12936         77 DLEGVDILVNNAGITKDG--LFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCA  154 (245)
T ss_pred             HcCCCCEEEECCCCCCCC--ccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHH
Confidence            999999999999986542  466778899999999999999999999999887777789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|+++..+++.++.++.+.|+++++++||+++|++..+
T Consensus       155 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        155 SKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence            99999999999999999999999999999999988654

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=230.52  Aligned_cols=191  Identities=23%  Similarity=0.358  Sum_probs=171.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+|++|||||+||||+++++.|+++|++|++++|+.+..++..+.+..... ..++.++.+|++|++++++ ++++.+.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNL-QQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            578999999999999999999999999999999998777766655543321 1357889999999999999 99999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|++|||||...+.  ...+.+.+++++.+++|+.+++.+.+.++|.|++.+.+++|++||..+..+.++...|+++|
T Consensus        80 ~~id~vv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         80 GRIDLLVNNAGYANGG--FVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             CCeeEEEECCcccccC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhH
Confidence            9999999999987543  45677899999999999999999999999999888788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++++.|+++++.|+.++||+++.++||.++|+++.
T Consensus       158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence            99999999999999999999999999999999765

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=225.36  Aligned_cols=174  Identities=22%  Similarity=0.280  Sum_probs=147.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||++|||+++++.|+++|++|++++|+.+++++..+++        ++.++++|++|+++++++++++.+   ++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~~~~---~i   70 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--------DVDAIVCDNTDPASLEEARGLFPH---HL   70 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------cCcEEecCCCCHHHHHHHHHHHhh---cC
Confidence            4899999999999999999999999999999877665554433        246788999999999999887653   69


Q ss_pred             cEEEeCCcccCC----CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           95 DIMFNNAGIVDE----AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        95 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      |++|||||....    ...++.+ +.++|++++++|+.+++.+++.++|.|++  .|+||++||..    .+.+..|+++
T Consensus        71 d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~as  143 (223)
T PRK05884         71 DTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAI  143 (223)
T ss_pred             cEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHH
Confidence            999999985321    1112333 57899999999999999999999999975  48999999976    3566899999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+|+.+|+++++.|+.++||+||+|+||+++|++..
T Consensus       144 Kaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~  179 (223)
T PRK05884        144 KAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD  179 (223)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh
Confidence            999999999999999999999999999999999754

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-34  Score=227.32  Aligned_cols=189  Identities=29%  Similarity=0.438  Sum_probs=166.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++.+.+.+...... ..+.++++|++|+++++++++++.+.++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE-GVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC-ceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            8999999999999999999999999999998 66666666555433221 134568899999999999999999999999


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |++|||||....  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.+.+..|+++|+++
T Consensus        81 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~  158 (251)
T PRK07069         81 SVLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAV  158 (251)
T ss_pred             cEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHH
Confidence            999999998654  346778899999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCC--cEEEEEeCCcccCccccc
Q 044923          175 VGLMKNTAVELGRFG--IRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       175 ~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~  207 (214)
                      +.|+++++.|+.+++  |+|+.|+||+++|++...
T Consensus       159 ~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        159 ASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             HHHHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence            999999999997765  999999999999998754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=2.1e-34  Score=225.43  Aligned_cols=190  Identities=26%  Similarity=0.339  Sum_probs=171.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ...+|.|+|||+-+|+|+.+|+.|.++|++|+...-+++..+++..+...     .+...++.|+|++++++++.+.+++
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s-----~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKS-----PRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcC-----CcceeEeeccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999888777777666541     2467789999999999999999998


Q ss_pred             HcC--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           90 QYG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        90 ~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+  .+-.||||||+.... ++.+=.+.+++++++++|++|++.+++.++|++++. +||||++||.+|..+.|..++|
T Consensus       101 ~l~~~gLwglVNNAGi~~~~-g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y  178 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFL-GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPY  178 (322)
T ss_pred             hcccccceeEEecccccccc-CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccc
Confidence            764  599999999977543 345557889999999999999999999999999876 7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+||+|++.|+.+++.|+.+.||.|..|.||...|+...
T Consensus       179 ~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  179 CVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999999999999875

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=227.67  Aligned_cols=191  Identities=40%  Similarity=0.620  Sum_probs=173.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||+++||++++++|+++|++|++++|+.+..+...+++....   .++.++.||++|+++++++++++.+.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG---GKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999887777766665432   25788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      ++++|++|||||...+.  .+.+.+.++++..+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++
T Consensus        79 ~~~~d~vi~~a~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~  156 (258)
T PRK12429         79 FGGVDILVNNAGIQHVA--PIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSA  156 (258)
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHH
Confidence            99999999999986543  4677888999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++..+++.++.|+.+.||+++.++||.+.|++..
T Consensus       157 k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        157 KHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR  192 (258)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence            999999999999999999999999999999998864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-34  Score=226.15  Aligned_cols=189  Identities=31%  Similarity=0.464  Sum_probs=163.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |++|||||++|||.++++.|+++|++|+++. |+.+..+....++....   .++.+++||++|+++++++++++.+.++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG---GRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            7899999999999999999999999988765 55555555555554432   2578999999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCC-Cccch
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVT-SHAYT  168 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~-~~~y~  168 (214)
                      ++|++|||||...+. .++.+.+.++|+..+++|+.+++.+++.+++.+..++   .++||++||..+..+.+. +.+|+
T Consensus        80 ~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~  158 (248)
T PRK06947         80 RLDALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYA  158 (248)
T ss_pred             CCCEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccH
Confidence            999999999986432 3467788999999999999999999999999886553   578999999988877664 57899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++|++++.|++.++.++.++||+|+.|+||+++|++..
T Consensus       159 ~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        159 GSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             hhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence            99999999999999999999999999999999999854

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-34  Score=226.47  Aligned_cols=192  Identities=27%  Similarity=0.369  Sum_probs=167.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|+++||||++|||+++++.|+++|++|++++|+. +..++..+.+....   .++.++.+|++|++++.++++++.+.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG---VEVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            48899999999999999999999999999998864 33344444443322   257889999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC------CCeEEEecCCCcccCCCCCc
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG------RGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~~~~~  165 (214)
                      +++|++|||||...+...++.+.+.++|+..+++|+.+++.+.+.+.+.|.++.      .++||++||..+..+.+...
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  158 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRG  158 (256)
T ss_pred             CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCc
Confidence            999999999998754444567888999999999999999999999999998654      35799999999998889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|+++|++++.+++.++.|+.++||++++|+||++.|++...
T Consensus       159 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        159 EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence            999999999999999999999999999999999999987653

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=256.26  Aligned_cols=193  Identities=23%  Similarity=0.327  Sum_probs=172.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++....   .++.++.+|++|.++++++++++.+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG---GTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999888777777665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCC--CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILD--NDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+|++|++|||||.....  .+.+  .+.++++.++++|+.+++.+++.++|.|++++.++||++||.++..+.+....|
T Consensus       445 ~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  522 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRR--SVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAY  522 (657)
T ss_pred             hcCCCCEEEECCCCCCCC--ChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchH
Confidence            999999999999976432  2222  235789999999999999999999999998888999999999999889999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|+++++|+++++.|+.+.||+|++|+||+++|++...
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence            9999999999999999999999999999999999998754

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-34  Score=225.31  Aligned_cols=190  Identities=29%  Similarity=0.435  Sum_probs=163.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|++|||||++|||.+++++|+++|++|++..+ +++..++..+.+....   .++.++++|++|.+++.++++++.+.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG---GEALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC---CcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999888764 4444444444444322   246789999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCC-Cccc
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVT-SHAY  167 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~-~~~y  167 (214)
                      +++|++|||||...+. .++.+.+.++|++++++|+.+++.+++.+++.|.++.   .|+||++||..+..+.+. +..|
T Consensus        79 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y  157 (248)
T PRK06123         79 GRLDALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDY  157 (248)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccch
Confidence            9999999999986543 3466788999999999999999999999999997542   478999999988888776 4689


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++|++++.|+++++.|+.++||+|+.|+||.+.|++..
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        158 AASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence            999999999999999999999999999999999999754

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.7e-34  Score=225.14  Aligned_cols=188  Identities=24%  Similarity=0.394  Sum_probs=163.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++||||++|||+++|++|+++|++|++++|+. +..+...+++....   .++.++++|++|++++.++++++.+.++++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG---GNARLLQFDVADRVACRTLLEADIAEHGAY   77 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC---CeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999998887653 44555555554432   257889999999999999999999999999


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHH-HhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAA-RVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      |++|+|+|.....  ++.+.+.++|+.++++|+.+++.+++.++ |.+.+++.++||++||..+..+.+.+..|+++|++
T Consensus        78 ~~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a  155 (239)
T TIGR01831        78 YGVVLNAGITRDA--AFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAG  155 (239)
T ss_pred             CEEEECCCCCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHH
Confidence            9999999986543  45677899999999999999999999874 66665667899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +..++++++.|+.++||++++|+||+++|++..+.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (239)
T TIGR01831       156 LIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV  190 (239)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh
Confidence            99999999999999999999999999999997643

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2.1e-34  Score=215.29  Aligned_cols=191  Identities=28%  Similarity=0.333  Sum_probs=158.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |.++||||++|||..++++|.+. |..+++. .|+++.+   .+++........++.+++.|+++.++++++++++.+--
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            56999999999999999999976 6665554 4556664   22222222223478999999999999999999999874


Q ss_pred             --CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-----------CCeEEEecCCCcc
Q 044923           92 --GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-----------RGSIISTASVCGV  158 (214)
Q Consensus        92 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----------~g~iv~~sS~~~~  158 (214)
                        .++|+||||||...+- ......+.+.|.+.+++|..|+++++|+++|++++..           +..|||+||.++.
T Consensus        81 g~~GlnlLinNaGi~~~y-~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSY-NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             ccCCceEEEeccceeeec-ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence              5899999999998543 3456677888999999999999999999999998753           4489999998887


Q ss_pred             cCC---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          159 IGG---VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       159 ~~~---~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+.   ..+.+|.+||+|++.|+|.++.|+++.+|-|..+|||+|+|+|...-
T Consensus       160 ~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  160 IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC
Confidence            543   35679999999999999999999999999999999999999997643

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.4e-34  Score=224.49  Aligned_cols=189  Identities=29%  Similarity=0.463  Sum_probs=165.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |+++||||++|||+++|+.|+++|++|++++|+.+ ..++.......   ...++.++++|++|++++.++++++.+.++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF---TEDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999998854 11222222111   123578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++|||+|....  .++.+.+.++|++++++|+.+++.+++.++|.+++++.++||++||..+..+.+....|+++|+
T Consensus        80 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~  157 (245)
T PRK12824         80 PVDILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKA  157 (245)
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHH
Confidence            99999999998643  3467788999999999999999999999999998888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++|++.++.++.+.||+++.++||.+.|++.+.
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  192 (245)
T PRK12824        158 GMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ  192 (245)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence            99999999999999999999999999999998654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=5.5e-34  Score=232.97  Aligned_cols=194  Identities=18%  Similarity=0.206  Sum_probs=162.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...   ..++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP---PDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988777776666422   12578899999999999999999888


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC--CeEEEecCCCccc--------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR--GSIISTASVCGVI--------  159 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~~--------  159 (214)
                      .++++|+||||||...+. ....+.+.++|+.++++|+.|++.+++.++|.|++++.  ++||++||.....        
T Consensus        80 ~~~~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~  158 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIP  158 (322)
T ss_pred             hCCCccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccC
Confidence            888999999999986432 12345688999999999999999999999999987753  6999999965432        


Q ss_pred             ---------------------------CCCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCcc-cCccccc
Q 044923          160 ---------------------------GGVTSHAYTSSKHGVVGLMKNTAVELG-RFGIRVNCVSPYAV-SSPMAKG  207 (214)
Q Consensus       160 ---------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~Pg~v-~t~~~~~  207 (214)
                                                 ++....+|+.||.+...+++.++.++. ..||+|++++||.| .|++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        159 IPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             CCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence                                       012345899999999999999999984 46999999999999 5887654

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-34  Score=227.99  Aligned_cols=187  Identities=22%  Similarity=0.339  Sum_probs=166.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .|++|||||+||||++++++|+++|++|+++.|+.+..+++.+...      .++.++++|++|.+++.++++++.+.++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG------DRLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999999999999998766555443321      2578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|+||||||.....  +..+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.|....|+++|+
T Consensus        76 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  153 (276)
T PRK06482         76 RIDVVVSNAGYGLFG--AAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW  153 (276)
T ss_pred             CCCEEEECCCCCCCc--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHH
Confidence            999999999987543  456778899999999999999999999999998888889999999998888899999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++.|+++++.++.+.||+++.++||.+.|++...
T Consensus       154 a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        154 GIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence            99999999999999999999999999999987543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.7e-34  Score=228.99  Aligned_cols=186  Identities=22%  Similarity=0.342  Sum_probs=153.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH----HHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI----ENAVNTAV   88 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~----~~~~~~~~   88 (214)
                      ++++||||++|||++++++|+++|++|+++.|+ .+.++.+.+++....+  ..+.++.+|++|++++    +++++++.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~~~~~~~~~~~~~~   79 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP--NSAVTCQADLSNSATLFSRCEAIIDACF   79 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC--CceEEEEccCCCchhhHHHHHHHHHHHH
Confidence            689999999999999999999999999987654 5566666565543222  2456789999999865    55666667


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCH-----------HHHHHHHhhhhhHHHHHHHHHHHhhccC------CCCeEEE
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQ-----------AEFERILSVNLVGAFLGTKHAARVMKPA------GRGSIIS  151 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~g~iv~  151 (214)
                      +.+|++|+||||||...+.  ++.+.+.           ++|.+++++|+.+++.+++.++|.|++.      ..+.||+
T Consensus        80 ~~~g~iD~lv~nAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        80 RAFGRCDVLVNNASAFYPT--PLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             HccCCceEEEECCccCCCC--cccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence            7889999999999986542  2333232           3699999999999999999999999643      2468999


Q ss_pred             ecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          152 TASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       152 ~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ++|..+..+.+.+.+|++||+|+++|+++++.|+.+.||+|++|+||++.|+
T Consensus       158 ~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       158 LCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             ehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            9999999889999999999999999999999999999999999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=223.16  Aligned_cols=184  Identities=21%  Similarity=0.327  Sum_probs=164.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++++||||+||||.++++.|+++|++|++++|+.+.++.+.+.+.      .++.++.+|++|.+++.++++++.+.+++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            368999999999999999999999999999998876655544431      25788999999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|++|||||..... .++.+.+.++|++++++|+.+++.+++.++|.|.+++.+++|++||..+..+.+....|+++|++
T Consensus        75 id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~  153 (248)
T PRK10538         75 IDVLVNNAGLALGL-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAF  153 (248)
T ss_pred             CCEEEECCCccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHH
Confidence            99999999975322 24567789999999999999999999999999988888899999999998888899999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ++.+++.++.++.++||++++|+||++.+++
T Consensus       154 ~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            9999999999999999999999999998444

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-34  Score=224.63  Aligned_cols=191  Identities=30%  Similarity=0.472  Sum_probs=169.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|+++||||++|||+.+++.|+++|++ |++++|+.+..+...+.+....   .++.++.+|+++++++.++++.+.
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG---AKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHH
Confidence            378899999999999999999999999999 9999998776666555553322   256788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.++++|++|||+|....  .++.+.+.++|+.++++|+.+++.+++.++|.|.+++ .+++|++||..+..+.+....|
T Consensus        80 ~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y  157 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAY  157 (260)
T ss_pred             HHhCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchh
Confidence            999999999999998643  3466788999999999999999999999999997654 5899999999988888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +++|+++++|+++++.|+.+.||++++++||++.|++.
T Consensus       158 ~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        158 CASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            99999999999999999999999999999999999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=222.86  Aligned_cols=197  Identities=25%  Similarity=0.412  Sum_probs=174.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC--CHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT--KEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~~~~~~~~~   87 (214)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++.....  .++.++.+|++  +++++.++++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG--PQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCC--CCceEEEecccCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998777777666654432  24567777876  789999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.++++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.++||++||..+..+.+.+.+|
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y  165 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAY  165 (247)
T ss_pred             HHHhCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCccc
Confidence            99999999999999986543 34567788999999999999999999999999998888999999999999898999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +++|++++.+++.++.++...||++++++||++.|++....+
T Consensus       166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~  207 (247)
T PRK08945        166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF  207 (247)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc
Confidence            999999999999999999999999999999999999765443

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=226.39  Aligned_cols=192  Identities=21%  Similarity=0.280  Sum_probs=170.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..++|+++||||++|||++++++|+++|++|+++.|+.+..++..+.+....   .++.++.+|++|++++.++++++.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG---GEAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4667999999999999999999999999999999998766665555544322   2577889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||....  .+..+.+.++|++.+++|+.+++.+++.++|.+.+++.++||++||..+..+.+....|++
T Consensus        84 ~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGA  161 (274)
T ss_pred             hcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHH
Confidence            99999999999998653  3456778899999999999999999999999998877889999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|++++.+++.++.++.+.||++++++||+++|++..
T Consensus       162 sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        162 AKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW  198 (274)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence            9999999999999999889999999999999998643

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=221.05  Aligned_cols=181  Identities=29%  Similarity=0.458  Sum_probs=153.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|++|||||++|||+++++.|+++|++|+++.++ .+..+++.++.        .+.++.+|++|.+++.++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~--------~~~~~~~D~~~~~~~~~~~~---   71 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET--------GATAVQTDSADRDAVIDVVR---   71 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh--------CCeEEecCCCCHHHHHHHHH---
Confidence            3779999999999999999999999999999887664 33333332221        24678899999998877664   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y  167 (214)
                       .++++|++|||||.....  +..+.+.++|++.+++|+.+++.+++.+++.|++  .+++|++||..+. .+.+....|
T Consensus        72 -~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  146 (237)
T PRK12742         72 -KSGALDILVVNAGIAVFG--DALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAY  146 (237)
T ss_pred             -HhCCCcEEEECCCCCCCC--CcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcch
Confidence             357899999999986432  4567789999999999999999999999999965  4789999998874 577888999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++|++++.+++.++.++.++||+||+|+||+++|++..
T Consensus       147 ~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~  185 (237)
T PRK12742        147 AASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP  185 (237)
T ss_pred             HHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence            999999999999999999999999999999999999854

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=223.32  Aligned_cols=188  Identities=22%  Similarity=0.292  Sum_probs=163.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..+|++|||||++|||++++++|+++|++|+++.++ .+..+.+.+.+....   .++.++++|++|.+++.++++++.+
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG---RRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999887664 444455555544322   2577899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+.  ++.+.+.++|++++++|+.+++.+++.+.+.+.+...+++|+++|..+..+.|.+..|++
T Consensus        84 ~~~~iD~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~  161 (258)
T PRK09134         84 ALGPITLLVNNASLFEYD--SAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTL  161 (258)
T ss_pred             HcCCCCEEEECCcCCCCC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHH
Confidence            999999999999986543  467888999999999999999999999999998877889999999878778888889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +|++++.+++.++.++.+. |+|++|+||++.|+.
T Consensus       162 sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~  195 (258)
T PRK09134        162 SKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSG  195 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCc
Confidence            9999999999999999775 999999999998754

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=223.10  Aligned_cols=191  Identities=26%  Similarity=0.383  Sum_probs=166.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|+++||||+||||+++|++|+++|++|++. .|+.+..++..+.+....   .++.++++|++|++++.++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG---GKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            678999999999999999999999999998775 677665555555543321   2577899999999999999999998


Q ss_pred             Hc------CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           90 QY------GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        90 ~~------g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      ++      +++|++|||||...+  ..+.+.+.+.|+..+++|+.+++.+.+.++|.+.+.  +++|++||..+..+.++
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~  156 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTG  156 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCC
Confidence            87      479999999998654  346778899999999999999999999999998654  68999999999888999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +..|+++|++++.++++++.++.+.|+++++++||++.|++..+.
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~  201 (254)
T PRK12746        157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL  201 (254)
T ss_pred             CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh
Confidence            999999999999999999999999999999999999999987654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.9e-33  Score=220.44  Aligned_cols=189  Identities=27%  Similarity=0.409  Sum_probs=166.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |++|||||++|||++++++|+++|++|+++.| +.+..++..++.....   .++.++.+|++|++++.++++++.+.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALG---FDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC---CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999998887 4444444444433221   3578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++|||||...+.  .+.+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+++..|+++|+
T Consensus        78 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~  155 (242)
T TIGR01829        78 PIDVLVNNAGITRDA--TFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKA  155 (242)
T ss_pred             CCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHH
Confidence            999999999986543  466788999999999999999999999999999888889999999999988999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++.+++.++.++.+.||+++.++||++.|++.+.
T Consensus       156 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  190 (242)
T TIGR01829       156 GMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA  190 (242)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc
Confidence            99999999999999999999999999999998654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-33  Score=221.00  Aligned_cols=179  Identities=31%  Similarity=0.490  Sum_probs=156.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||++++++|+++|++|++++|+....      .      ..++.++++|++++      ++++.+
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L------SGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c------CCcEEEEECChHHH------HHHHHH
Confidence            57899999999999999999999999999999998875321      0      12467889999987      555556


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||..... .++.+.+.++|++.+++|+.+++.+++.++|.+.+++.++||++||..+..+.+....|++
T Consensus        64 ~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  142 (235)
T PRK06550         64 WVPSVDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTA  142 (235)
T ss_pred             hhCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHH
Confidence            678999999999975322 3467788999999999999999999999999998887899999999999998899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.++++++.|+.+.||+|++|+||+++|++...
T Consensus       143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~  180 (235)
T PRK06550        143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA  180 (235)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc
Confidence            99999999999999999999999999999999998653

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=220.27  Aligned_cols=189  Identities=22%  Similarity=0.306  Sum_probs=167.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|+++||||++|||++++++|+++|++|++++|+++..+...+++.....  .++.++++|++|++++.++++++.+   
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~---   75 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA--VAVSTHELDILDTASHAAFLDSLPA---   75 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEecCCCChHHHHHHHHHHhh---
Confidence            37899999999999999999999999999999998777666666544322  3578899999999999999988765   


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++|||+|.....  ...+.+.+++.+.+++|+.+++.+++.+.|.|.+++.+++|++||..+..+.+....|+++|+
T Consensus        76 ~~d~vv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  153 (243)
T PRK07102         76 LPDIVLIAVGTLGDQ--AACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKA  153 (243)
T ss_pred             cCCEEEECCcCCCCc--ccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHH
Confidence            469999999986543  456788999999999999999999999999999888899999999999988899999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++.+++++++.|+.+.||++++|+||+++|++....
T Consensus       154 a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~  189 (243)
T PRK07102        154 ALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL  189 (243)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc
Confidence            999999999999999999999999999999986543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-33  Score=220.16  Aligned_cols=195  Identities=39%  Similarity=0.601  Sum_probs=174.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++.+|++|||||++|||.++++.|+++|++|+++ .|+.+..++..+.+....   .++.++.+|++|++++.++++++.
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG---GDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988 888777666666655421   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++||++|....  .++.+.+.++|++.+++|+.+++.+.+.+.|.+.+++.+++|++||..+..+.+....|+
T Consensus        79 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~  156 (247)
T PRK05565         79 EKFGKIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYS  156 (247)
T ss_pred             HHhCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHH
Confidence            999999999999998732  346678899999999999999999999999999888889999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++|++++.+++.++.++.+.|+++++++||+++|++.+...
T Consensus       157 ~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~  197 (247)
T PRK05565        157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS  197 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC
Confidence            99999999999999999999999999999999998876543

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.6e-33  Score=219.09  Aligned_cols=194  Identities=29%  Similarity=0.504  Sum_probs=167.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++++++||||++|||.++++.|+++|++|++++|+.+.+++..+++....   .++..+++|++++++++++++.+.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG---TEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998877776666655432   2577899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCC------CCC-CCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCC
Q 044923           90 QYGKLDIMFNNAGIVDEAK------PNI-LDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGG  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~------~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~  161 (214)
                      .++++|++|||||...+..      ..+ .+.+.++|..++++|+.+++.+.+.+.|.|.++ ..+.||++||.. ..+.
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~  157 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGN  157 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCC
Confidence            8899999999999754321      011 566889999999999999999999999999765 457899998864 5677


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +....|+++|++++.++++++.++.++||++++++||.+.|++...
T Consensus       158 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~  203 (253)
T PRK08217        158 MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA  203 (253)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence            8889999999999999999999999999999999999999998654

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-33  Score=218.30  Aligned_cols=193  Identities=34%  Similarity=0.530  Sum_probs=167.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC----cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD----DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +++|+++||||++|||+++|+.|+++|++|+++.|..    +..++..+++...   ...+.++.+|++|++++.+++++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA---GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc---CCcEEEEEccCCCHHHHHHHHHH
Confidence            6789999999999999999999999999998876643    3333333333322   12578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHH-HhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAA-RVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      +.+.++++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.+. +.+++++.+++|++||..+..+.+++.
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  158 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQV  158 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCc
Confidence            99999999999999998754  356778899999999999999999999999 777777778999999999998999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .|+.+|++++.+++.++.++.+.||+++.++||+++|++..+.
T Consensus       159 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  201 (249)
T PRK12827        159 NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA  201 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc
Confidence            9999999999999999999998999999999999999986543

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-33  Score=216.00  Aligned_cols=184  Identities=18%  Similarity=0.257  Sum_probs=157.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++.+ .       .++.+..+|++|+++++++++++.+  ++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-------~~~~~~~~D~~d~~~~~~~~~~~~~--~~   71 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-------PGVHIEKLDMNDPASLDQLLQRLQG--QR   71 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-------cccceEEcCCCCHHHHHHHHHHhhc--CC
Confidence            789999999999999999999999999999998876544322 1       1467788999999999999988754  48


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---CCCccchhh
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---VTSHAYTSS  170 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~y~~s  170 (214)
                      +|++|||||...+...++.+.+.+++...+++|+.+++.+++.++|.+++. .+.++++||..+..+.   ..+..|+++
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~s  150 (225)
T PRK08177         72 FDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKAS  150 (225)
T ss_pred             CCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHH
Confidence            999999999875544456778899999999999999999999999999754 4789999997766543   356789999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++++.|++.++.|+.++||++++|+||+++|++....
T Consensus       151 K~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~  188 (225)
T PRK08177        151 KAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN  188 (225)
T ss_pred             HHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC
Confidence            99999999999999999999999999999999997643

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.2e-33  Score=209.83  Aligned_cols=163  Identities=31%  Similarity=0.582  Sum_probs=147.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC--CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIK--DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      |++|||||++|||++++++|+++|. +|++++|+  .+..+++.+++....   .++.++++|++++++++++++++.+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG---AKITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT---SEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc---cccccccccccccccccccccccccc
Confidence            7899999999999999999999965 68888888  566666766666433   37899999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      ++++|++|||||...+  .++.+.+.++|+++|++|+.+++.+.+.++|    ++.++||++||.++..+.|.+.+|+++
T Consensus        78 ~~~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~as  151 (167)
T PF00106_consen   78 FGPLDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSAS  151 (167)
T ss_dssp             HSSESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHH
T ss_pred             cccccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHH
Confidence            9999999999999863  4678889999999999999999999999999    447999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 044923          171 KHGVVGLMKNTAVEL  185 (214)
Q Consensus       171 K~a~~~l~~~la~e~  185 (214)
                      |+|+++|+++++.|+
T Consensus       152 kaal~~~~~~la~e~  166 (167)
T PF00106_consen  152 KAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-33  Score=219.50  Aligned_cols=190  Identities=31%  Similarity=0.486  Sum_probs=168.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++++|||||+||||+++++.|+++|++|++++|+.+..++..+.+....   ..+.++.+|++|++++.++++++.++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG---GEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999877776666655432   2577889999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCC-CHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|++|||||.....  .+.+. +.+++++.+++|+.+++.+.+.+.|.|.+. .+++|++||..+..+.+.+..|+++|
T Consensus        78 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  154 (263)
T PRK06181         78 GIDILVNNAGITMWS--RFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASK  154 (263)
T ss_pred             CCCEEEECCCccccc--chhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHH
Confidence            999999999986543  45666 889999999999999999999999998765 47999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++++.+++.++.++.+.|++++++.||.+.|++.+..
T Consensus       155 ~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  191 (263)
T PRK06181        155 HALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA  191 (263)
T ss_pred             HHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence            9999999999999999999999999999999986644

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-33  Score=218.00  Aligned_cols=180  Identities=21%  Similarity=0.239  Sum_probs=155.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++++||||++|||++++++|+++|++|++++|+++.++++.+.    .   .++.+++||++|+++++++++++..   .
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~---~~~~~~~~D~~~~~~~~~~~~~~~~---~   71 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----S---ANIFTLAFDVTDHPGTKAALSQLPF---I   71 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c---CCCeEEEeeCCCHHHHHHHHHhccc---C
Confidence            7899999999999999999999999999999987665544332    1   2467899999999999999887642   5


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|++|+|||.....  +..+.+.++|++++++|+.+++.+++.+.|+|.+  .+++|++||..+..+.+....|+++|++
T Consensus        72 ~d~~i~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a  147 (240)
T PRK06101         72 PELWIFNAGDCEYM--DDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAA  147 (240)
T ss_pred             CCEEEEcCcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHH
Confidence            79999999975322  2345788999999999999999999999999964  3689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++.|++.++.|+.++||++++++||++.|++...
T Consensus       148 ~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~  181 (240)
T PRK06101        148 VAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK  181 (240)
T ss_pred             HHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence            9999999999999999999999999999998653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=5.5e-33  Score=245.77  Aligned_cols=190  Identities=34%  Similarity=0.507  Sum_probs=169.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++...+.+....+. ..+..+++|++|++++.++++++.+
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-GRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777666665533221 2467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.+...+|+
T Consensus       490 ~~g~iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~  567 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS  567 (676)
T ss_pred             hcCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH
Confidence            99999999999997643  3567788999999999999999999999999998765 57999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      ++|++++.++++++.|+++.||+||+|+||.+.+
T Consensus       568 aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       568 AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence            9999999999999999999999999999999964

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=215.09  Aligned_cols=179  Identities=22%  Similarity=0.325  Sum_probs=158.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.      ..        ...++.+|++|++++.++++++.+.+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~~--------~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------DF--------PGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------cc--------CceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999998643      00        12468899999999999999998877


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                       ++|++|||+|...+.  ++.+.+.++|++.+++|+.+++.+.+.++|.|++.+.++||++||.. ..+.+....|+++|
T Consensus        68 -~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK  143 (234)
T PRK07577         68 -PVDAIVNNVGIALPQ--PLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAK  143 (234)
T ss_pred             -CCcEEEECCCCCCCC--ChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHH
Confidence             689999999986543  45677899999999999999999999999999988888999999985 45677889999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++++.|+++++.|+.+.||++++|+||++.|++.+..
T Consensus       144 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~  180 (234)
T PRK07577        144 SALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT  180 (234)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc
Confidence            9999999999999999999999999999999987543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.5e-32  Score=216.36  Aligned_cols=194  Identities=36%  Similarity=0.547  Sum_probs=173.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+.+|+++||||+++||+++++.|+++|++|++++|+.+..+...+.+....   .++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG---GKARARQVDVRDRAALKAAVAAGVE   79 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999777666666665432   2478899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y~  168 (214)
                      .++++|++|||+|...+.  ++.+.+.+++++.++.|+.+++.+.+.++|.|.+++.+++|++||..+. .+.+....|+
T Consensus        80 ~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~  157 (251)
T PRK12826         80 DFGRLDILVANAGIFPLT--PFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYA  157 (251)
T ss_pred             HhCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHH
Confidence            999999999999987543  4567789999999999999999999999999988878899999999888 7888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|++++.+++.++.++.+.|++++.+.||.+.|+..+..
T Consensus       158 ~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (251)
T PRK12826        158 ASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL  197 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence            9999999999999999998999999999999999976543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-32  Score=216.19  Aligned_cols=191  Identities=26%  Similarity=0.385  Sum_probs=164.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|++|||||++|||++++++|+++|++|++..|+ .+...+....+....   .++.++.+|+++++++.++++++.
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG---GEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC---CeeEEEEeccCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999998877654 333333333333321   246788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||||...+.  ++.+.+.++|+..+++|+.+++.+++.+.|.+++.  +++|++||..+..+.++...|+
T Consensus        80 ~~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~  155 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFS--PFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYG  155 (252)
T ss_pred             HHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHH
Confidence            9999999999999986443  46677888999999999999999999999999764  7899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|++++.+++.++.|+.+ +|+++.+.||+++|++....
T Consensus       156 ~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~  194 (252)
T PRK06077        156 AMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESL  194 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhh
Confidence            9999999999999999988 99999999999999986543

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-33  Score=211.31  Aligned_cols=161  Identities=24%  Similarity=0.326  Sum_probs=145.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||++|||+++++.|+++ ++|++++|+..                    .++||++|++++++++++    ++++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~----~~~i   56 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEK----VGKV   56 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHh----cCCC
Confidence            6999999999999999999999 99999988642                    267999999999988764    4789


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |++|||||....  .++.+.+.++|++.+++|+.+++.+++.+.|+|.+.  ++|+++||..+..+.+.+..|+++|+++
T Consensus        57 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~sK~a~  132 (199)
T PRK07578         57 DAVVSAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATVNGAL  132 (199)
T ss_pred             CEEEECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHHHHHH
Confidence            999999997643  356788999999999999999999999999999754  7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ++|+++++.|+ ++||+|++|+||++.|++.
T Consensus       133 ~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        133 EGFVKAAALEL-PRGIRINVVSPTVLTESLE  162 (199)
T ss_pred             HHHHHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence            99999999999 8899999999999999874

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-33  Score=218.39  Aligned_cols=187  Identities=20%  Similarity=0.256  Sum_probs=159.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |+++||||++|||++++++|+++|++|++++|+. +.+++..+    ..  ..++.++++|++|++++.++++++.+.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----QY--NSNLTFHSLDLQDVHELETNFNEILSSIQ   75 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----cc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999999999999876 33222221    11  12577899999999999999999888765


Q ss_pred             C--cc--EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccc
Q 044923           93 K--LD--IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        93 ~--id--~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .  ++  ++|+|||...+. .++.+.+.++|.+.+++|+.+++.+++.++|.|.+. +.++||++||..+..+.+...+|
T Consensus        76 ~~~~~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  154 (251)
T PRK06924         76 EDNVSSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAY  154 (251)
T ss_pred             cccCCceEEEEcceecccC-cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHH
Confidence            3  22  899999986543 357788999999999999999999999999999875 45789999999999899999999


Q ss_pred             hhhHHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|++++.|++.++.|+.  +.||+|++|.||++.|++...
T Consensus       155 ~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~  196 (251)
T PRK06924        155 CSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ  196 (251)
T ss_pred             hHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence            9999999999999999974  568999999999999998653

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=213.07  Aligned_cols=192  Identities=28%  Similarity=0.397  Sum_probs=170.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.+..++..+++...     .+..+.+|++|.+++.++++++.
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD-----ALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc-----CceEEEeecCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999887665555544332     35678899999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++||++|...+  ..+.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+
T Consensus        78 ~~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  155 (239)
T PRK12828         78 RQFGRLDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYA  155 (239)
T ss_pred             HHhCCcCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhH
Confidence            999999999999997643  245667899999999999999999999999999888788999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.+++.++.++.+.||+++.+.||.+.|++...
T Consensus       156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~  194 (239)
T PRK12828        156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA  194 (239)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh
Confidence            999999999999999998899999999999999987543

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=216.36  Aligned_cols=186  Identities=31%  Similarity=0.487  Sum_probs=164.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|+++||||++|||+++++.|+++|++|++++|+.+..+.+.+.+..     .++.++++|++|++++.++++++.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-----ARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999999999999988776666555421     2578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++|||+|...+.  ++.+.+.++|...+++|+.+++.+.+.+++.+.+++.++||++||..+.. ..+...|+.+|+
T Consensus        77 ~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~~~~y~~sK~  153 (257)
T PRK07074         77 PVDVLVANAGAARAA--SLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-ALGHPAYSAAKA  153 (257)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-CCCCcccHHHHH
Confidence            999999999986543  45678899999999999999999999999999888788999999977653 346679999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++.++++++.++.++||+|++++||++.|++..
T Consensus       154 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        154 GLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence            9999999999999999999999999999999854

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-32  Score=233.02  Aligned_cols=192  Identities=29%  Similarity=0.467  Sum_probs=165.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+++|++|||||++|||+++++.|+++|++|++++++.. .+...+.....     +..++.+|++|+++++++++++.
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~-~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~  279 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GEALAAVANRV-----GGTALALDITAPDAPARIAEHLA  279 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999887432 12222211111     23578999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++|||||....  ..+.+.+.++|+.++++|+.+++.+.+.+.+.+..+..++||++||..+..+.+++..|+
T Consensus       280 ~~~g~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~  357 (450)
T PRK08261        280 ERHGGLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYA  357 (450)
T ss_pred             HhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHH
Confidence            999999999999998754  356788999999999999999999999999976555668999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|++++.|+++++.|+.++||++|+|+||+++|++...+
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~  397 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI  397 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc
Confidence            9999999999999999999999999999999999987643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=4.1e-32  Score=213.55  Aligned_cols=189  Identities=25%  Similarity=0.388  Sum_probs=163.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |++|||||++|||++++++|+++|++|++. .|+.+..++...++....   ..+.++++|++|+++++++++++.+.++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG---GKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC---CeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999998764 566665555555554432   2467899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCC-Cccch
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVT-SHAYT  168 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~-~~~y~  168 (214)
                      ++|++|||+|..... .++.+.+.++|+..+++|+.+++.+++.+++.+.++.   .+++|++||..+..+.|. +..|+
T Consensus        79 ~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~  157 (247)
T PRK09730         79 PLAALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYA  157 (247)
T ss_pred             CCCEEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchH
Confidence            999999999976432 3467788999999999999999999999999987653   578999999988887775 46899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++|++++.+++.++.|+.+.||++++++||.+.|++..
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        158 ASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            99999999999999999999999999999999999754

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-32  Score=211.65  Aligned_cols=190  Identities=31%  Similarity=0.473  Sum_probs=169.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +.+++++||||+|+||.+++++|+++|++|++++|+++..++..+.+...    ..+.++++|++|.+++.++++++.+.
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK----GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc----CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999887776666666432    25788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      ++++|++||++|....  .++.+.+.+++++.+++|+.+++.+++++++.+ +++.+++|++||..+..+.+....|+++
T Consensus        80 ~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~s  156 (237)
T PRK07326         80 FGGLDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNAS  156 (237)
T ss_pred             cCCCCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHH
Confidence            9999999999997643  346778899999999999999999999999998 4456899999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++..+++.++.|+.+.|+++++|+||.+.|++...
T Consensus       157 k~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~  193 (237)
T PRK07326        157 KFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH  193 (237)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc
Confidence            9999999999999999999999999999999987654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3.4e-32  Score=212.80  Aligned_cols=180  Identities=21%  Similarity=0.276  Sum_probs=148.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++++||||++|||+++|++|+++|  ..|++..|+...  .    .     ...++.++++|++|+++++++    .+.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~-----~~~~~~~~~~Dls~~~~~~~~----~~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----F-----QHDNVQWHALDVTDEAEIKQL----SEQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----c-----ccCceEEEEecCCCHHHHHHH----HHhc
Confidence            479999999999999999999985  556666664421  1    1     112578899999999988774    4556


Q ss_pred             CCccEEEeCCcccCCC----CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc---CCCCC
Q 044923           92 GKLDIMFNNAGIVDEA----KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---GGVTS  164 (214)
Q Consensus        92 g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---~~~~~  164 (214)
                      +++|++|||||.....    ..++.+.+.+.|++.+++|+.+++.+++.++|.|++++.++++++||..+..   +.+.+
T Consensus        66 ~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~  145 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGW  145 (235)
T ss_pred             CCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCc
Confidence            8999999999987532    2346678889999999999999999999999999888778999998865543   34667


Q ss_pred             ccchhhHHHHHHHHHHHHHHHcc--CCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGR--FGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~--~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|+++|++++.|+++++.|+.+  +||+|++|+||+++|++..++
T Consensus       146 ~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~  191 (235)
T PRK09009        146 YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF  191 (235)
T ss_pred             chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch
Confidence            89999999999999999999976  699999999999999997654

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-32  Score=215.57  Aligned_cols=196  Identities=34%  Similarity=0.555  Sum_probs=171.5

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |...+++|+++||||++|||+++++.|+++|++|++++|+.+..+++.+.....     ++.++.+|++|++++.+++++
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-----KVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC-----ceEEEEccCCCHHHHHHHHHH
Confidence            334588999999999999999999999999999999999876665554444321     467889999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCCcccCCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~  165 (214)
                      +.+.++++|+|||++|...+. ......+.++|++++++|+.+++.+++.+.+.+.+.+. +.++++||..+..+.+.+.
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~  158 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPT-GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRT  158 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCc
Confidence            999999999999999987332 34567788999999999999999999999999887766 7899999988888889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .|+.+|++++.+++.++.++.+.+++++++.||++.|++....
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~  201 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV  201 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH
Confidence            9999999999999999999988899999999999999987544

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1e-31  Score=211.11  Aligned_cols=193  Identities=34%  Similarity=0.551  Sum_probs=168.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|+++||||++|||.++++.|+++|++|+++.|+.+. .+...+++....   .++.++.+|++|++++.++++++.
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG---GKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999888776542 344444443221   357788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|++||+||...+  ....+.+.+++++.+++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.+....|+
T Consensus        79 ~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~  156 (248)
T PRK05557         79 AEFGGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYA  156 (248)
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhH
Confidence            999999999999998654  245677889999999999999999999999999887778999999998888889999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.+++.++.++.+.|+++++++||+++|++.+.
T Consensus       157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence            999999999999999999999999999999999987654

>PRK09291 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-32  Score=214.75  Aligned_cols=183  Identities=25%  Similarity=0.348  Sum_probs=160.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||+||||+++++.|+++|++|+++.|+.+..+++.+......   .++.++.+|++|++++.++++      +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~------~   72 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG---LALRVEKLDLTDAIDRAQAAE------W   72 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcceEEEeeCCCHHHHHHHhc------C
Confidence            5789999999999999999999999999999998766655555443322   257889999999998877654      3


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|+||||||....  .++.+.+.++|+..+++|+.+++.+++.+++.+.+.+.++||++||..+..+.+....|+++|+
T Consensus        73 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~  150 (257)
T PRK09291         73 DVDVLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKH  150 (257)
T ss_pred             CCCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHH
Confidence            89999999998754  3567889999999999999999999999999998887899999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++.+++.++.++.+.||+++.|+||++.|++..
T Consensus       151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            9999999999999999999999999999998754

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-32  Score=212.69  Aligned_cols=184  Identities=34%  Similarity=0.512  Sum_probs=160.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|+++||||++|||+++++.|+++|++|++++|+.+..+++.+..        ++.++.+|++|++++.++++.  
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~--   74 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET--------GCEPLRLDVGDDAAIRAALAA--   74 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCeEEEecCCCHHHHHHHHHH--
Confidence            4578999999999999999999999999999999999876655443322        246788999999988887764  


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                        ++++|++|||||....  .+..+.+.++|++.+++|+.+++.+.+++++.+.+++ .++||++||..+..+.+....|
T Consensus        75 --~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  150 (245)
T PRK07060         75 --AGAFDGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAY  150 (245)
T ss_pred             --hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHh
Confidence              5789999999998643  3456678899999999999999999999999987654 4799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++|++++.+++.++.++.+.||++++++||++.|++.+
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence            999999999999999999999999999999999999854

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.4e-32  Score=212.71  Aligned_cols=195  Identities=25%  Similarity=0.298  Sum_probs=181.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .+.++||||++|||+++|.++..+|++|.++.|+.+++++..+.++...... ++.+..+|++|.+++..+++++.+..+
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~-~v~~~S~d~~~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVE-DVSYKSVDVIDYDSVSKVIEELRDLEG  111 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccc-eeeEeccccccHHHHHHHHhhhhhccC
Confidence            3799999999999999999999999999999999999999999988665533 377899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      .+|.+|+|||..-++  .+.+.+.++++..+++|+++++.++++.+|.|++.. .|+|+.+||..+..+.+++++|+++|
T Consensus       112 ~~d~l~~cAG~~v~g--~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK  189 (331)
T KOG1210|consen  112 PIDNLFCCAGVAVPG--LFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSK  189 (331)
T ss_pred             CcceEEEecCccccc--ccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHH
Confidence            999999999998765  578999999999999999999999999999999886 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +|+.+|+..+++|+.++||+|....|+.+.||...+-..
T Consensus       190 ~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~  228 (331)
T KOG1210|consen  190 FALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK  228 (331)
T ss_pred             HHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc
Confidence            999999999999999999999999999999998766544

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-32  Score=214.37  Aligned_cols=183  Identities=17%  Similarity=0.220  Sum_probs=158.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH-HHHHc-
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT-AVSQY-   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~~~-   91 (214)
                      +++|||||+||||++++++|+++|++|++++|+.+..  .   ....   ..++.++++|++|++++++++++ +.+.+ 
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   73 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAA---GERLAEVELDLSDAAAAAAWLAGDLLAAFV   73 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhcc---CCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence            4699999999999999999999999999999876431  1   1111   12578899999999999998876 55555 


Q ss_pred             --CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           92 --GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        92 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                        +++|++|||||...+. .++.+.+.++|+..+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+++..|++
T Consensus        74 ~~~~~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  152 (243)
T PRK07023         74 DGASRVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCA  152 (243)
T ss_pred             cCCCceEEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHH
Confidence              3799999999986543 3466778999999999999999999999999998887889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|++++.+++.++.+ .+.||+++.|+||+++|++..
T Consensus       153 sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        153 TKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             HHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence            999999999999999 788999999999999999754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.6e-31  Score=208.51  Aligned_cols=192  Identities=34%  Similarity=0.552  Sum_probs=171.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++.+|++|||||+++||.++++.|+++|++|++++|+++..+.....+....   .++.++.+|++|++++.++++++.+
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG---GEARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999877766666555332   2577888999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++||++|.....  +..+.+.++|.+.++.|+.+++.+.+.+.|++.+.+.++||++||..+..+.+....|+.
T Consensus        79 ~~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~  156 (246)
T PRK05653         79 AFGALDILVNNAGITRDA--LLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSA  156 (246)
T ss_pred             HhCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHh
Confidence            999999999999986542  456778899999999999999999999999998877789999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|++++.+++.++.++.+.|++++.++||.+.+++..
T Consensus       157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence            9999999999999999889999999999999998765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=2.8e-31  Score=209.74  Aligned_cols=189  Identities=35%  Similarity=0.563  Sum_probs=168.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+.+....   .++.++.+|++|++++.++++++.+.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG---GSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999999998877766666554322   2578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++|||||.....  ...+.+.++++.+++.|+.+++.+++.++|.|++.+.+++|++||..+..+.+.+..|+.+|+
T Consensus        78 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~  155 (255)
T TIGR01963        78 GLDILVNNAGIQHVA--PIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKH  155 (255)
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHH
Confidence            999999999986543  345678899999999999999999999999998888889999999988888899999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++.+++.++.++.+.||+++.++||.+.|++..
T Consensus       156 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~  189 (255)
T TIGR01963       156 GLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE  189 (255)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH
Confidence            9999999999999888999999999999998743

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-31  Score=236.98  Aligned_cols=191  Identities=37%  Similarity=0.555  Sum_probs=172.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||+||||+++++.|+++|++|++++|+.+.++...+.+...    ..+.++.+|++|++++.++++++.+
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~----~~v~~v~~Dvtd~~~v~~~~~~~~~  494 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP----DRALGVACDVTDEAAVQAAFEEAAL  494 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc----CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999987776666655432    2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|++|||||....  .++.+.+.++|+..+++|+.+++.+++.+.+.|++++. |+||++||..+..+.++..+|+
T Consensus       495 ~~g~iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~  572 (681)
T PRK08324        495 AFGGVDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYG  572 (681)
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHH
Confidence            99999999999998754  35678899999999999999999999999999988764 8999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcc--cCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAV--SSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v--~t~~~~  206 (214)
                      ++|++++.+++.++.++.+.||+||.|+||.+  .|+++.
T Consensus       573 asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~  612 (681)
T PRK08324        573 AAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT  612 (681)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc
Confidence            99999999999999999999999999999999  787654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-31  Score=207.33  Aligned_cols=194  Identities=33%  Similarity=0.551  Sum_probs=168.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|++|||||+|+||+++++.|+++|++|++..|+.+ ..+...+.+....   .++.++.+|++|++++.++++++.+
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~   80 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG---RRAQAVQADVTDKAALEAAVAAAVE   80 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCcCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999877666543 3333444443322   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++||+||...+  ..+.+.+.++|.+.+++|+.+++.+.+.+.+++.+.+.+++|++||..+..+.+....|+.
T Consensus        81 ~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~  158 (249)
T PRK12825         81 RFGRIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAA  158 (249)
T ss_pred             HcCCCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHH
Confidence            99999999999997644  3456778999999999999999999999999998888889999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|++++.+++.++.++.+.|++++.++||.+.|++.....
T Consensus       159 sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~  198 (249)
T PRK12825        159 AKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI  198 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc
Confidence            9999999999999999889999999999999999876543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.6e-33  Score=200.10  Aligned_cols=192  Identities=34%  Similarity=0.549  Sum_probs=173.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+|-+++||||.+|+|++.|++|+++|++|++.+-..++.++..+++..      ++.|.+.|++.+++++.++...+.+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~------~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGG------KVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCC------ceEEeccccCcHHHHHHHHHHHHhh
Confidence            6788999999999999999999999999999999999999888888753      7899999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCC----CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------CCCeEEEecCCCcccC
Q 044923           91 YGKLDIMFNNAGIVDEAK----PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA------GRGSIISTASVCGVIG  160 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~g~iv~~sS~~~~~~  160 (214)
                      ||++|.++||||+....+    ..-...+.|++++++++|++|+|.+++...-+|-+.      .+|.||++.|.+..-+
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg  160 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG  160 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence            999999999999874221    112345789999999999999999999988888653      3789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..++++|++||.++.+++--++.+++..|||++.|.||.++||+....
T Consensus       161 q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl  208 (260)
T KOG1199|consen  161 QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL  208 (260)
T ss_pred             ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh
Confidence            999999999999999999999999999999999999999999997654

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=8e-31  Score=205.35  Aligned_cols=184  Identities=26%  Similarity=0.357  Sum_probs=161.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|+++||||+||||+++|+.|+++|+ +|++++|+.+..++       .   ..++.++.+|++|++++.++++.  
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~---~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L---GPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c---CCceEEEEecCCCHHHHHHHHHh--
Confidence            46789999999999999999999999999 89999998755432       1   12578899999999998887764  


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                        ++++|++||++|..... .++.+.+.++|...+++|+.+++.+++++.|.+++.+.+++|++||..+..+.+....|+
T Consensus        71 --~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~  147 (238)
T PRK08264         71 --ASDVTILVNNAGIFRTG-SLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYS  147 (238)
T ss_pred             --cCCCCEEEECCCcCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhH
Confidence              46899999999984322 356778899999999999999999999999999888889999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+|++++.+++.++.++.++|++++.+.||.++|++....
T Consensus       148 ~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~  187 (238)
T PRK08264        148 ASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL  187 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC
Confidence            9999999999999999999999999999999999986543

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=1.1e-30  Score=205.57  Aligned_cols=191  Identities=25%  Similarity=0.370  Sum_probs=163.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++|++|||||++|||++++++|+++|++|++++|+. +..+...+.+.....  ..+.++.+|++|.+++.++++++.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRP--GSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999864 334444444433222  2467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|++|||||...+.  ++.+.+.++|+.++++|+.+++.+.+++.|.+.++ .+.+++++|..+..+.++...|++
T Consensus        82 ~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~  158 (249)
T PRK09135         82 AFGRLDALVNNASSFYPT--PLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCA  158 (249)
T ss_pred             HcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHH
Confidence            999999999999986543  45667788999999999999999999999998765 478888888887788888899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.+++.++.++.+ +++++++.||++.||+...
T Consensus       159 sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        159 AKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             HHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccc
Confidence            999999999999999865 7999999999999998654

>PRK08017 oxidoreductase; Provisional

Probab=99.98  E-value=1.8e-30  Score=205.37  Aligned_cols=183  Identities=27%  Similarity=0.333  Sum_probs=162.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc-C
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY-G   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g   92 (214)
                      |+++||||+||||.++++.|+++|++|++++|+.++.+...+    .     ++..+.+|++|.+++.++++.+.+.. +
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----L-----GFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----C-----CCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            689999999999999999999999999999998765543321    1     35778999999999999999887754 6


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|.+|||+|...+  .++.+.+.+++++.+++|+.|++.+++.++|.+.+.+.+++|++||..+..+.+....|+++|+
T Consensus        74 ~~~~ii~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  151 (256)
T PRK08017         74 RLYGLFNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKY  151 (256)
T ss_pred             CCeEEEECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHH
Confidence            89999999997643  3466788999999999999999999999999999888889999999999989999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++.+.++++.++.+.|++++.+.||++.|++...
T Consensus       152 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  186 (256)
T PRK08017        152 ALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN  186 (256)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc
Confidence            99999999999999999999999999999987654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=2.4e-30  Score=202.39  Aligned_cols=187  Identities=32%  Similarity=0.514  Sum_probs=163.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +||||++++||.++++.|+++|++|+++.|+. +..+...+.+....   .++.++.+|++|+++++++++++.+.++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG---VKALGVVCDVSDREDVKAVVEEIEEELGPI   77 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999998875 44444444444332   257789999999999999999999999999


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |++||++|.....  .+.+.+.+++++.+++|+.+.+.+++.+.+++.+.+.+++|++||..+..+.+.+..|+++|+++
T Consensus        78 d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~  155 (239)
T TIGR01830        78 DILVNNAGITRDN--LLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGV  155 (239)
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHH
Confidence            9999999986432  35677889999999999999999999999999877778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +.+++.++.++.+.|++++.++||++.|++...
T Consensus       156 ~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~  188 (239)
T TIGR01830       156 IGFTKSLAKELASRNITVNAVAPGFIDTDMTDK  188 (239)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh
Confidence            999999999999999999999999999987643

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.9e-31  Score=206.03  Aligned_cols=184  Identities=22%  Similarity=0.239  Sum_probs=152.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|+++||||+||||++++++|+++|++|++++|+.+ ..+...+.+....   .++.++++|++|++++.++++++.+
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG---GRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999888753 4444555554322   2567899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-----cCCCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-----IGGVTS  164 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----~~~~~~  164 (214)
                      .++++|++|||||.....     .   .++...+++|+.+++.+++.+.|+|.+  .+++|++||..+.     .+.+.+
T Consensus        81 ~~~~~d~vi~~ag~~~~~-----~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~  150 (248)
T PRK07806         81 EFGGLDALVLNASGGMES-----G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEY  150 (248)
T ss_pred             hCCCCcEEEECCCCCCCC-----C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccc
Confidence            999999999999864211     1   125678999999999999999999964  3689999996543     234556


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|+++|++++.+++.++.|+++.||+|++|.||.+.|++...
T Consensus       151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~  193 (248)
T PRK07806        151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT  193 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh
Confidence            7899999999999999999999999999999999999887543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-30  Score=203.55  Aligned_cols=184  Identities=22%  Similarity=0.224  Sum_probs=139.2

Q ss_pred             CcccCCCCC-ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH
Q 044923            1 MLQANSMSP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD   79 (214)
Q Consensus         1 ~~~~~~~~~-~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   79 (214)
                      |.+..-|.+ .+++|+++||||++|||+++|++|+++|++|++++|+....  .... . . .   ....+.+|++|.++
T Consensus         1 ~~~~~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~--~~~~-~-~-~---~~~~~~~D~~~~~~   72 (245)
T PRK12367          1 MPQADPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN--SESN-D-E-S---PNEWIKWECGKEES   72 (245)
T ss_pred             CCCcchhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh--hhhh-c-c-C---CCeEEEeeCCCHHH
Confidence            444444433 47899999999999999999999999999999999876221  1111 1 1 1   12567899999987


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC---CCCeEEEecCCC
Q 044923           80 IENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA---GRGSIISTASVC  156 (214)
Q Consensus        80 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~~sS~~  156 (214)
                      +.+       .++++|++|||||...     ..+.+.++|++.+++|+.+++.+++.++|.|.++   +.+.+++.+|.+
T Consensus        73 ~~~-------~~~~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a  140 (245)
T PRK12367         73 LDK-------QLASLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEA  140 (245)
T ss_pred             HHH-------hcCCCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccc
Confidence            754       3568999999999742     2345789999999999999999999999999763   233344445655


Q ss_pred             cccCCCCCccchhhHHHHHHH---HHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          157 GVIGGVTSHAYTSSKHGVVGL---MKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       157 ~~~~~~~~~~y~~sK~a~~~l---~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +..+ +....|++||+|+..+   .+.++.|+.+.|++|+.++||+++|++.
T Consensus       141 ~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~  191 (245)
T PRK12367        141 EIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN  191 (245)
T ss_pred             ccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC
Confidence            5544 4667899999998644   3455556678899999999999999874

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-30  Score=199.96  Aligned_cols=180  Identities=18%  Similarity=0.236  Sum_probs=150.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++..    .     .+.++.+|++|.++++++++++..  ++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~-----~~~~~~~D~~~~~~v~~~~~~~~~--~~   70 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L-----GAEALALDVADPASVAGLAWKLDG--EA   70 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c-----cceEEEecCCCHHHHHHHHHHhcC--CC
Confidence            689999999999999999999999999999998765543321    1     246789999999999998876632  47


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC---ccchhh
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS---HAYTSS  170 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---~~y~~s  170 (214)
                      +|++|||+|..........+.+.++|+..+++|+.+++.+++.+.|.|.+. .+++++++|..+..+....   ..|+++
T Consensus        71 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~s  149 (222)
T PRK06953         71 LDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRAS  149 (222)
T ss_pred             CCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHh
Confidence            999999999874433445677899999999999999999999999998664 5789999998776654332   359999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++++.+++.++.++  .++++++|+||+++|++.++
T Consensus       150 K~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        150 KAALNDALRAASLQA--RHATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             HHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC
Confidence            999999999999886  47999999999999999765

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-30  Score=201.78  Aligned_cols=175  Identities=22%  Similarity=0.278  Sum_probs=151.2

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 044923           17 LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDI   96 (214)
Q Consensus        17 lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~   96 (214)
                      |||||++|||++++++|+++|++|++++|+.+..+...+.+..    ..++.++.+|++|++++.+++++    ++++|+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~   72 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----GAPVRTAALDITDEAAVDAFFAE----AGPFDH   72 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999999999987766665555432    13577899999999999888875    478999


Q ss_pred             EEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHHHH
Q 044923           97 MFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG  176 (214)
Q Consensus        97 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~  176 (214)
                      +|||+|...+  .++.+.+.++|++++++|+.+++.+++  .+.+.  +.++||++||..+..+.+....|+++|+++++
T Consensus        73 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  146 (230)
T PRK07041         73 VVITAADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEA  146 (230)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHH
Confidence            9999998654  356778899999999999999999999  44554  35899999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          177 LMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       177 l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++++.|+.+  |+|++++||++.|+++..
T Consensus       147 ~~~~la~e~~~--irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        147 LARGLALELAP--VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             HHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence            99999999975  999999999999998654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7e-30  Score=199.94  Aligned_cols=186  Identities=24%  Similarity=0.325  Sum_probs=159.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++||||++|||.++++.|+++|++|++++|+++..+...+.+...    .++.++++|+++++++.++++++.+
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY----GNIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999887666554554432    1468889999999999999999988


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-CCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-GGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~~~~~~y~  168 (214)
                      .++++|.+|+++|.....  ++.  +.++++..+++|+.+++.+.+.++|.+++  .+++|++||..+.. +.+....|+
T Consensus        78 ~~~~id~ii~~ag~~~~~--~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~  151 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVED--TVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYA  151 (238)
T ss_pred             HhCCCCEEEEcCCCcCCC--chH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHH
Confidence            889999999999975322  222  34889999999999999999999999865  37899999987643 567778899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ++|++++.+++.++.++.+.||+++.|+||++.|++.
T Consensus       152 ~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        152 VAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE  188 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence            9999999999999999999999999999999999864

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.97  E-value=2.3e-29  Score=188.57  Aligned_cols=191  Identities=24%  Similarity=0.289  Sum_probs=170.5

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++||++||+|-.  +.|++.||+.|.++|+.+.+++.++ ++++..+++.+..+   ...+++||+++.++++.+|.++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~---s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG---SDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc---CCeEEecCCCCHHHHHHHHHHH
Confidence            5899999999976  6999999999999999999999887 45555555544433   2467999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccC--CCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++++|++|.|||+.++..  .....+.+.+.|.|...+++..++...+++++.|+|..  .|.||.++-.++....|.+.
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYN  156 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYN  156 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCc
Confidence            999999999999999985  34567888999999999999999999999999999987  57899999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ..+.+|++|+.-+|.+|.+++++|||||+|+-|+++|-...
T Consensus       157 vMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas  197 (259)
T COG0623         157 VMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS  197 (259)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh
Confidence            99999999999999999999999999999999999985543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=5.4e-31  Score=197.06  Aligned_cols=192  Identities=22%  Similarity=0.241  Sum_probs=156.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+|++|+||+|+|||..++..+..++-..+..+++....+ . +.+.-..+  ..-.....|+++.+-+..+++..++++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~-~~L~v~~g--d~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-L-EGLKVAYG--DDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-c-cceEEEec--CCcceechHHHHHHHHHHHHhhhhhcC
Confidence            4688999999999999998888887765444443332222 1 11111111  122345678888888899999999999


Q ss_pred             CCccEEEeCCcccCCCCCCC-CCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchh
Q 044923           92 GKLDIMFNNAGIVDEAKPNI-LDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      |+.|++|||||..++....+ ...+.++|++.+++|+++.+-+.++++|.+++++ .+.+||+||.++..|++.|++||+
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~  160 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS  160 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh
Confidence            99999999999998754322 2567889999999999999999999999999985 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+|.++|++.++.|-. ++|+|.++.||.++|+|+...
T Consensus       161 ~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~i  198 (253)
T KOG1204|consen  161 SKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCI  198 (253)
T ss_pred             hHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHH
Confidence            99999999999999954 799999999999999998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3e-27  Score=183.58  Aligned_cols=179  Identities=25%  Similarity=0.357  Sum_probs=153.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..++..+..       ..+.++.+|++|++++++++++    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~----~~   70 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-------PGATPFPVDLTDPEAIAAAVEQ----LG   70 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-------ccceEEecCCCCHHHHHHHHHh----cC
Confidence            478999999999999999999999 99999999876544443322       1367889999999999888764    35


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|++||++|....  .++.+.+.++|.+.+++|+.+++.+++.+++.++++ .+++|++||..+..+.++...|+.+|+
T Consensus        71 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~  147 (227)
T PRK08219         71 RLDVLVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKF  147 (227)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHH
Confidence            89999999998643  245677889999999999999999999999998876 478999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++.+++.++.++... +++++|+||.+.+++...
T Consensus       148 a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~  181 (227)
T PRK08219        148 ALRALADALREEEPGN-VRVTSVHPGRTDTDMQRG  181 (227)
T ss_pred             HHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhh
Confidence            9999999999988766 999999999999887543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.95  E-value=8.5e-27  Score=225.59  Aligned_cols=186  Identities=16%  Similarity=0.156  Sum_probs=154.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcc-----------------------------------------
Q 044923           12 QGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDL-----------------------------------------   49 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~-----------------------------------------   49 (214)
                      +|+++|||||++|||+++|++|+++ |++|++++|+...                                         
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 6999999998210                                         


Q ss_pred             ---hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhh
Q 044923           50 ---GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN  126 (214)
Q Consensus        50 ---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  126 (214)
                         ..+..+.+......+..+.++.||++|.++++++++++.+. ++||+||||||....  ..+.+.+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD--KHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHH
Confidence               00011111111111235788999999999999999999887 689999999998754  357889999999999999


Q ss_pred             hhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +.|.+.+.+.+.+.+.    ++||++||..+..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|..
T Consensus      2153 v~G~~~Ll~al~~~~~----~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI----KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHhCC----CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            9999999888877543    4699999999999999999999999999999999999874  489999999999999854

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=1.8e-26  Score=192.13  Aligned_cols=174  Identities=20%  Similarity=0.209  Sum_probs=134.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||+++||||+||||++++++|+++|++|++++|+.+.+++.   .....   ..+..+.+|++|++++.+.+     
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~---~~v~~v~~Dvsd~~~v~~~l-----  243 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGED---LPVKTLHWQVGQEAALAELL-----  243 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcC---CCeEEEEeeCCCHHHHHHHh-----
Confidence            46799999999999999999999999999999999886544322   21111   23567899999998876543     


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC----CCeEEEecCCCcccCCCCCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG----RGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~~~~~~  165 (214)
                        +++|++|||||....     .+.+.+++++.+++|+.|++.+++.++|.|++++    ++.+|++|+ +.. ..+...
T Consensus       244 --~~IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~  314 (406)
T PRK07424        244 --EKVDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSP  314 (406)
T ss_pred             --CCCCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCch
Confidence              589999999997532     3568899999999999999999999999997764    245667665 333 334556


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|++||+|+..|++..+ +.  .++.+..+.||+++|++..
T Consensus       315 ~Y~ASKaAl~~l~~l~~-~~--~~~~I~~i~~gp~~t~~~~  352 (406)
T PRK07424        315 LYELSKRALGDLVTLRR-LD--APCVVRKLILGPFKSNLNP  352 (406)
T ss_pred             HHHHHHHHHHHHHHHHH-hC--CCCceEEEEeCCCcCCCCc
Confidence            89999999999985443 32  4577778899999998753

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.95  E-value=3.8e-26  Score=170.13  Aligned_cols=175  Identities=19%  Similarity=0.290  Sum_probs=145.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHH---HHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVC---EDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      |+++||||++|||.+++++|+++|+ .|++..|+++..+...   +++...   ..++.++.+|+++++++.++++++.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL---GAEVTVVACDVADRAALAAALAAIPA   77 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999997 5788888765544332   233222   23577889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|.+|||+|....  ..+.+.+.++|++.+++|+.+++.+.+.+.    +.+.+++|++||..+..+.+....|++
T Consensus        78 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~~~~~~~~~~y~~  151 (180)
T smart00822       78 RLGPLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAGVLGNPGQANYAA  151 (180)
T ss_pred             HcCCeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHHhcCCCCchhhHH
Confidence            89999999999998643  245677889999999999999999888873    345678999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                      +|++++.+++.++.    .|+++..+.||++.
T Consensus       152 sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      152 ANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999999887654    58899999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-26  Score=182.54  Aligned_cols=150  Identities=30%  Similarity=0.407  Sum_probs=128.9

Q ss_pred             HHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCC
Q 044923           29 AARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAK  108 (214)
Q Consensus        29 ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  108 (214)
                      +|++|+++|++|++++|+.+..+              ...++++|++|.++++++++++.   +++|+||||||....  
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~--------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT--------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh--------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--
Confidence            47899999999999999875431              12457899999999999988764   689999999997521  


Q ss_pred             CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc---------------------------CC
Q 044923          109 PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---------------------------GG  161 (214)
Q Consensus       109 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------------------~~  161 (214)
                              ++|+.++++|+.+++.+++.++|.|.+.  |+||++||.++..                           +.
T Consensus        62 --------~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (241)
T PRK12428         62 --------APVELVARVNFLGLRHLTEALLPRMAPG--GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV  131 (241)
T ss_pred             --------CCHHHhhhhchHHHHHHHHHHHHhccCC--cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC
Confidence                    2478999999999999999999999653  7999999988763                           55


Q ss_pred             CCCccchhhHHHHHHHHHHHH-HHHccCCcEEEEEeCCcccCccccc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTA-VELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la-~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +...+|++||+++++|++.++ .|++++||+||+|+||++.|+|..+
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        132 ALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence            677899999999999999999 9999999999999999999998764

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.94  E-value=4.7e-26  Score=172.98  Aligned_cols=198  Identities=20%  Similarity=0.255  Sum_probs=169.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC-----CeEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG-----AKVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g-----~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .|++||||++||||.+||++|.+..     .++++++|+.+++++.++.+.+..+ +...+.+++.|+++..++..+.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5999999999999999999999874     3488899999999999999988765 345678999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCC-------------------------CCCHHHHHHHHhhhhhHHHHHHHHHHHhh
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNIL-------------------------DNDQAEFERILSVNLVGAFLGTKHAARVM  141 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~-------------------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  141 (214)
                      ++++|.++|.++.|||.+......+.                         ..+.+++...|++|++|+|++.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999999753321110                         22456778899999999999999999999


Q ss_pred             ccCCCCeEEEecCCCcccC---------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          142 KPAGRGSIISTASVCGVIG---------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       142 ~~~~~g~iv~~sS~~~~~~---------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      -.+....+|.+||..+...         ..+..+|..||.+.+-|.-++...+.+-|+.-+.++||..-|.+...+.+
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            8887779999999877653         24456999999999999999999999999999999999999888766543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=1.5e-23  Score=171.52  Aligned_cols=168  Identities=17%  Similarity=0.169  Sum_probs=132.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++||++|||||+|+||++++++|+++|  ++|++.+|+......+.+.+..     .++.++.+|++|++++.++++   
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~l~~~~~---   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA-----PCLRFFIGDVRDKERLTRALR---   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC-----CcEEEEEccCCCHHHHHHHHh---
Confidence            468999999999999999999999986  6788888876543333322211     257889999999999888775   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                          ++|+|||+||....   +..+.   +....+++|+.|++.+++++.+    .+.+++|++||.....|   ..+|+
T Consensus        74 ----~iD~Vih~Ag~~~~---~~~~~---~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~  136 (324)
T TIGR03589        74 ----GVDYVVHAAALKQV---PAAEY---NPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYG  136 (324)
T ss_pred             ----cCCEEEECcccCCC---chhhc---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHH
Confidence                58999999997531   11222   2357899999999999998876    34568999999754433   46799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ++|++.+.+++.++.+++..|++++++.||.+..+
T Consensus       137 ~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       137 ATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            99999999999998888888999999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=5e-24  Score=160.47  Aligned_cols=174  Identities=23%  Similarity=0.392  Sum_probs=134.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc---chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA-KVLIADIKDD---LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++|||||++|||..+++.|+++|. ++++++|+..   ..++..++++...   ..+.+++||++|+++++++++++.+.
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g---~~v~~~~~Dv~d~~~v~~~~~~~~~~   78 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG---ARVEYVQCDVTDPEAVAAALAQLRQR   78 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE--TTSHHHHHHHHHTSHTT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC---CceeeeccCccCHHHHHHHHHHHHhc
Confidence            689999999999999999999985 5999999832   2334455555443   37899999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +++||.+||+||.....  .+.+.+.++++.++...+.|...+.+.+.+    ..-..+|.+||..+..+.+++..|+++
T Consensus        79 ~~~i~gVih~ag~~~~~--~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaA  152 (181)
T PF08659_consen   79 FGPIDGVIHAAGVLADA--PIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAA  152 (181)
T ss_dssp             SS-EEEEEE-------B---GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHH
T ss_pred             cCCcceeeeeeeeeccc--ccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHH
Confidence            99999999999997543  678899999999999999999988776644    445789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                      .+.++.|++....    .|.++.+|+.|+.+
T Consensus       153 N~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  153 NAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            9999999887664    47889999988764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.91  E-value=6.7e-23  Score=167.21  Aligned_cols=190  Identities=12%  Similarity=0.098  Sum_probs=142.6

Q ss_pred             CCcEEEEecCCChHHHH--HHHHHHHcCCeEEEEecCCcch------------hhHHHHhhccCCCCCCceEEEeeCCCH
Q 044923           12 QGKVALITGGAGSIGEC--AARLFSKHGAKVLIADIKDDLG------------ESVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~--ia~~L~~~g~~vi~~~r~~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      -+|++||||+++|||.+  +|+.| ++|++++++.+..+..            +.+.+.+....   ..+..+.||++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G---~~a~~i~~DVss~  115 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG---LYAKSINGDAFSD  115 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC---CceEEEEcCCCCH
Confidence            36999999999999999  89999 9999988887533221            12333333221   2456789999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCC-------------------CCCC-------------CCCHHHHHHHHhh
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAK-------------------PNIL-------------DNDQAEFERILSV  125 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-------------------~~~~-------------~~~~~~~~~~~~~  125 (214)
                      ++++++++++.+++|+||+||||+|......                   ....             ..+.++++.+++ 
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~-  194 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK-  194 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH-
Confidence            9999999999999999999999999873321                   0111             123344444433 


Q ss_pred             hhhHH-----HHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC--ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q 044923          126 NLVGA-----FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS--HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPY  198 (214)
Q Consensus       126 n~~~~-----~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg  198 (214)
                       ++|.     +.=+....++|.+  .+++|..|+.++....|.+  ..-+.+|++|+.-+|.++.++++.|+|+|++.+|
T Consensus       195 -vMggedw~~Wi~al~~a~lla~--g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g  271 (398)
T PRK13656        195 -VMGGEDWELWIDALDEAGVLAE--GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLK  271 (398)
T ss_pred             -hhccchHHHHHHHHHhcccccC--CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecC
Confidence             2333     2223445566654  4789999999999888877  4889999999999999999999999999999999


Q ss_pred             cccCccccccC
Q 044923          199 AVSSPMAKGFL  209 (214)
Q Consensus       199 ~v~t~~~~~~~  209 (214)
                      ++.|.....+.
T Consensus       272 ~~~T~Ass~Ip  282 (398)
T PRK13656        272 AVVTQASSAIP  282 (398)
T ss_pred             cccchhhhcCC
Confidence            99998776554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.90  E-value=4.5e-22  Score=164.43  Aligned_cols=176  Identities=17%  Similarity=0.134  Sum_probs=137.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||++|||||+|+||++++++|+++|++|++++|+..........+..    ..++.++.+|++|.+++.+++++.   
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~---   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL----AKKIEDHFGDIRDAAKLRKAIAEF---   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh----cCCceEEEccCCCHHHHHHHHhhc---
Confidence            5689999999999999999999999999999999877654433332221    124677899999999999888854   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  159 (214)
                        ++|+|||+|+...      ...+.+++...+++|+.+++.+++++.+.   ...+++|++||...+.           
T Consensus        75 --~~d~vih~A~~~~------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~  143 (349)
T TIGR02622        75 --KPEIVFHLAAQPL------VRKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRET  143 (349)
T ss_pred             --CCCEEEECCcccc------cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccC
Confidence              6899999999542      23345667889999999999999887431   1246899999964331           


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHcc----CCcEEEEEeCCcccCcc
Q 044923          160 -GGVTSHAYTSSKHGVVGLMKNTAVELGR----FGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 -~~~~~~~y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~Pg~v~t~~  204 (214)
                       +..+..+|+.+|++.+.+++.++.++.+    +|++++.+.|+.+..|.
T Consensus       144 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       144 DPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence             1233568999999999999999988754    48999999999999874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06720 hypothetical protein; Provisional

Probab=99.90  E-value=3.3e-22  Score=148.53  Aligned_cols=145  Identities=23%  Similarity=0.412  Sum_probs=117.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.+.+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++....   .++.++++|+++.+++++++++
T Consensus        10 ~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~v~~   86 (169)
T PRK06720         10 MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG---GEALFVSYDMEKQGDWQRVISI   86 (169)
T ss_pred             cccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998877666666665322   2466789999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-------CCCeEEEecCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-------GRGSIISTASVCGV  158 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~g~iv~~sS~~~~  158 (214)
                      +.+.+|++|++|||||..... ..+.+.+.++ ++  .+|+.+.+..++++.+.|.++       +.|++..+||.+..
T Consensus        87 ~~~~~G~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         87 TLNAFSRIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HHHHcCCCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            999999999999999987543 3455555555 44  677777888999999987765       35788888886654

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=6.1e-22  Score=169.28  Aligned_cols=174  Identities=17%  Similarity=0.231  Sum_probs=135.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC----C--CCCCceEEEeeCCCHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS----S--SANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~----~--~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .+||++|||||+||||++++++|+++|++|+++.|+.++++.+.+.+....    +  ...++.++.+|++|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            478999999999999999999999999999999999887766655543210    1  1124788999999998876543


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVT  163 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~  163 (214)
                             +++|+||||+|....        ...+|...+++|+.|...+++++.+    .+.++||++||.++. .+.+.
T Consensus       158 -------ggiDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p~  218 (576)
T PLN03209        158 -------GNASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFPA  218 (576)
T ss_pred             -------cCCCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCccc
Confidence                   589999999996521        1224778899999988888877654    356789999998764 23332


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      . .|. +|+++..+.+.+..++...||+++.|+||++.|++.
T Consensus       219 ~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d  258 (576)
T PLN03209        219 A-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTD  258 (576)
T ss_pred             c-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcc
Confidence            2 243 788888888999999989999999999999988753

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=1e-21  Score=160.70  Aligned_cols=175  Identities=17%  Similarity=0.181  Sum_probs=135.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+..+......... ....++.++.+|++|.+++.++++      
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALD-GAKERLKLFKADLLDEGSFELAID------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhcc-CCCCceEEEeCCCCCchHHHHHHc------
Confidence            4799999999999999999999999999998888876554432222211 111257889999999999888876      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC---------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV---------  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  162 (214)
                       ++|+|||+||....      ..+.+++...+++|+.+++.+++++.+.+.   .++||++||.++..+..         
T Consensus        77 -~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~---~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 -GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVSS---VKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             -CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcCC---ceEEEEecchhheecCCccCCCCCcc
Confidence             68999999996421      223456789999999999999999877542   36899999976653211         


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 -------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 -------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                   ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..|...
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCC
Confidence                         0246999999999999888765   3799999999999988754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=3.4e-20  Score=151.53  Aligned_cols=175  Identities=18%  Similarity=0.186  Sum_probs=131.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+||+++||||+|+||++++++|+++|++|+++.|+.+..+......... ....++.++.+|++|++++.++++     
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~-----   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALD-GAKERLKLFKADLLEESSFEQAIE-----   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhcc-CCCCceEEEecCCCCcchHHHHHh-----
Confidence            46899999999999999999999999999998888876554433322211 111357889999999999888877     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-CC--------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-GG--------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~--------  161 (214)
                        ++|++||+|+.....   .    .+.+...+++|+.++..+++.+...   .+..+||++||.+... +.        
T Consensus        77 --~~d~vih~A~~~~~~---~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 --GCDAVFHTASPVFFT---V----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             --CCCEEEEeCCCcCCC---C----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCC
Confidence              689999999974321   1    1123567899999999888876542   1345899999976532 11        


Q ss_pred             --------C-----CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 --------V-----TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 --------~-----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                              |     ....|+.||.+.+.+++.+..+   .|+++..+.|+.+.+|...
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCC
Confidence                    0     1356999999999988888765   3899999999999998654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=2.2e-20  Score=153.77  Aligned_cols=179  Identities=18%  Similarity=0.064  Sum_probs=127.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhc-cCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISS-SSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~-~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.. ......++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            578899999999999999999999999999999988654211 11121111 1111125788999999999999888865


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCCcccC------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIG------  160 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~------  160 (214)
                           .+|+|||+|+.....      ...+.+...+++|+.++..+++++.+...++++ .++|++||...+-.      
T Consensus        83 -----~~d~Vih~A~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA------VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             -----CCCEEEECCcccchh------hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence                 589999999975321      123446778899999999999999888765321 26888887532211      


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHcc---CCcEEEEEeCCc
Q 044923          161 ----GVTSHAYTSSKHGVVGLMKNTAVELGR---FGIRVNCVSPYA  199 (214)
Q Consensus       161 ----~~~~~~y~~sK~a~~~l~~~la~e~~~---~gi~v~~v~Pg~  199 (214)
                          ......|+.||.+.+.+++.++.+++-   .++.++.+.|+.
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  197 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR  197 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence                112457999999999999999887642   234445555654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.85  E-value=1.6e-19  Score=148.61  Aligned_cols=173  Identities=18%  Similarity=0.198  Sum_probs=128.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|+++||||+|+||++++++|+++|++|+++.|+.+....... +.... ...++.++.+|++|.+++.++++     
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQ-ELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcC-CCCceEEEEcCCCChHHHHHHHh-----
Confidence            668999999999999999999999999999888887654332221 11110 01146788999999998887765     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  161 (214)
                        ++|+|||+|+...     ...  .+.+...+++|+.++..+++++.+..   +.+++|++||.+.+...         
T Consensus        80 --~~d~vih~A~~~~-----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~g~~~~~~~~~~~  147 (338)
T PLN00198         80 --GCDLVFHVATPVN-----FAS--EDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAVSINKLSGTGLVM  147 (338)
T ss_pred             --cCCEEEEeCCCCc-----cCC--CChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceeeeccCCCCCCcee
Confidence              6899999999532     111  12245678999999999998876532   34689999997654311         


Q ss_pred             ---------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 ---------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 ---------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                     +...+|+.||.+.+.+++.++.+   +|+++..+.|+.+..|..
T Consensus       148 ~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~  203 (338)
T PLN00198        148 NEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSL  203 (338)
T ss_pred             ccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCc
Confidence                           12446999999999999888765   489999999999988853

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=1.8e-19  Score=145.88  Aligned_cols=172  Identities=15%  Similarity=0.071  Sum_probs=126.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch--hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG--ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      -++|++|||||+|+||++++++|+++|++|+++.|+.+..  ......+..   ...++.++.+|++|.+++.+++.   
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~d~~~~~~~l~---   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC---EEERLKVFDVDPLDYHSILDALK---   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc---CCCceEEEEecCCCHHHHHHHHc---
Confidence            4578999999999999999999999999999998864321  111222211   11257788999999998876665   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-C-----
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-V-----  162 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~-----  162 (214)
                          .+|.++|.++...       +. ..+++..+++|+.|++.+++++.+.+.   .++||++||..+.... +     
T Consensus        78 ----~~d~v~~~~~~~~-------~~-~~~~~~~~~~nv~gt~~ll~aa~~~~~---v~riV~~SS~~a~~~~~~~~~~~  142 (297)
T PLN02583         78 ----GCSGLFCCFDPPS-------DY-PSYDEKMVDVEVRAAHNVLEACAQTDT---IEKVVFTSSLTAVIWRDDNISTQ  142 (297)
T ss_pred             ----CCCEEEEeCccCC-------cc-cccHHHHHHHHHHHHHHHHHHHHhcCC---ccEEEEecchHheecccccCCCC
Confidence                6889998765431       11 124678999999999999999887642   3689999997654211 0     


Q ss_pred             ------CC----------ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 ------TS----------HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 ------~~----------~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                            .+          ..|+.||...+.++..++.+   .|++++.|.|+.+..|...
T Consensus       143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCC
Confidence                  01          15999999988888777654   4899999999999988643

>PLN02650 dihydroflavonol-4-reductase

Probab=99.84  E-value=2.5e-19  Score=148.15  Aligned_cols=174  Identities=18%  Similarity=0.138  Sum_probs=130.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ..|++|||||+|+||++++++|+++|++|+++.|+.+..+......... ....++.++.+|++|.+++.++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLP-GATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhcc-CCCCceEEEEecCCChhhHHHHHh------
Confidence            4688999999999999999999999999999888766554443322111 111246788999999998888776      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC----C-----
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG----V-----  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----~-----  162 (214)
                       .+|+|||+|+....     ..  .+.+...+++|+.++..+++++.+...   ..+||++||.+...+.    +     
T Consensus        77 -~~d~ViH~A~~~~~-----~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~---~~r~v~~SS~~~~~~~~~~~~~~~E~  145 (351)
T PLN02650         77 -GCTGVFHVATPMDF-----ES--KDPENEVIKPTVNGMLSIMKACAKAKT---VRRIVFTSSAGTVNVEEHQKPVYDED  145 (351)
T ss_pred             -CCCEEEEeCCCCCC-----CC--CCchhhhhhHHHHHHHHHHHHHHhcCC---ceEEEEecchhhcccCCCCCCccCcc
Confidence             58999999986421     11  122357789999999999998876421   3579999997543211    0     


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 -------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 -------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                   ...+|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|...
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~  199 (351)
T PLN02650        146 CWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFIS  199 (351)
T ss_pred             cCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCC
Confidence                         1137999999999999998776   4899999999999998643

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.84  E-value=5.1e-19  Score=150.25  Aligned_cols=183  Identities=16%  Similarity=0.062  Sum_probs=133.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-------h---------hHHHHhhccCCCCCCceEE
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-------E---------SVCEDISSSSSSANGCSYV   70 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-------~---------~~~~~~~~~~~~~~~v~~~   70 (214)
                      .+..+++|++|||||+|+||++++++|+++|++|++++|.....       +         +..+.+....  ..++.++
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~~v  118 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS--GKEIELY  118 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhh--CCcceEE
Confidence            44568899999999999999999999999999999876421100       0         0001111111  1247889


Q ss_pred             EeeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEE
Q 044923           71 HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSII  150 (214)
Q Consensus        71 ~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv  150 (214)
                      .+|++|.+++.+++++.     ++|+|||+|+....   .....+.+++...+++|+.|++.+++++...-.   ..++|
T Consensus       119 ~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~---~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~~~~V  187 (442)
T PLN02572        119 VGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---DCHLV  187 (442)
T ss_pred             ECCCCCHHHHHHHHHhC-----CCCEEEECCCcccC---hhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---CccEE
Confidence            99999999999888864     68999999976431   233445567788899999999999988765321   23699


Q ss_pred             EecCCCcccC------------------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          151 STASVCGVIG------------------------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       151 ~~sS~~~~~~------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ++||...+-.                        ......|+.+|.+.+.+++.++..   .|+++..+.|+.+..|..
T Consensus       188 ~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        188 KLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             EEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence            9998654311                        112357999999999999887765   589999999999988753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.83  E-value=8.1e-19  Score=145.25  Aligned_cols=177  Identities=18%  Similarity=0.188  Sum_probs=131.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ..++++|||||+|+||++++++|+++|++|+++.|+.+..+.....+..    ..++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE----GDRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc----CCeEEEEECCCCCHHHHHHHHc-----
Confidence            4678899999999999999999999999999988876554444333321    1257889999999998887765     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHH--HHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEF--ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  161 (214)
                        ++|+|||+|+...... .....+.+.+  .++++.|+.++..+++++.+..   +.+++|++||.+.+...       
T Consensus        79 --~~d~Vih~A~~~~~~~-~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~  152 (353)
T PLN02896         79 --GCDGVFHVAASMEFDV-SSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWR  152 (353)
T ss_pred             --CCCEEEECCccccCCc-cccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCC
Confidence              5899999999764321 1112233333  4677888899999888876542   23579999996554211       


Q ss_pred             ------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 ------------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 ------------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                        +...+|+.||.+.+.+++.++.+   .|+++..+.|+.+..|..
T Consensus       153 ~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        153 AVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFL  211 (353)
T ss_pred             CccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCc
Confidence                              01137999999999999988765   379999999999988854

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.83  E-value=4.5e-19  Score=146.77  Aligned_cols=174  Identities=15%  Similarity=0.161  Sum_probs=125.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEE-EEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi-~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |++|||||+|+||+++++.|.++|+.++ +.++.... .... .+.... ...++.++.+|++|.+++.+++++.     
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   73 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVA-QSERFAFEKVDICDRAELARVFTEH-----   73 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhcc-cCCceEEEECCCcChHHHHHHHhhc-----
Confidence            6799999999999999999999998855 44443221 1111 111100 1124678899999999998887752     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhc---c--CCCCeEEEecCCCccc--------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMK---P--AGRGSIISTASVCGVI--------  159 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~--~~~g~iv~~sS~~~~~--------  159 (214)
                      ++|+|||+||....      +.+.++++..+++|+.++..+++++.+.+.   +  .+..++|++||.+.+.        
T Consensus        74 ~~D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  147 (355)
T PRK10217         74 QPDCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDF  147 (355)
T ss_pred             CCCEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCC
Confidence            69999999997532      234566789999999999999999887542   1  2235899999854321        


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          160 -----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                           +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|.
T Consensus       148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPY  194 (355)
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCC
Confidence                 12235689999999999999998764   6778878887776654

>PLN02214 cinnamoyl-CoA reductase

Probab=99.83  E-value=9.1e-19  Score=144.37  Aligned_cols=167  Identities=20%  Similarity=0.218  Sum_probs=128.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH-HHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV-CEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|+++||||+|+||++++++|+++|++|+++.|+.+..... ...+...   ..++.++.+|++|.+++.++++    
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG---KERLILCKADLQDYEALKAAID----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC---CCcEEEEecCcCChHHHHHHHh----
Confidence            5688999999999999999999999999999999876543221 1222111   1246788999999999888876    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-------  162 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------  162 (214)
                         ++|+|||+|+...           +++...+++|+.++..+++++.+    .+..++|++||.++.++.+       
T Consensus        81 ---~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~  142 (342)
T PLN02214         81 ---GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAV  142 (342)
T ss_pred             ---cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcc
Confidence               6899999999631           13567899999999998887754    3345899999975443210       


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 --------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 --------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                    ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..|..
T Consensus       143 ~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~  196 (342)
T PLN02214        143 VDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPL  196 (342)
T ss_pred             cCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCC
Confidence                          1236999999999999888766   389999999999988754

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=9.5e-19  Score=142.86  Aligned_cols=174  Identities=18%  Similarity=0.232  Sum_probs=127.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+....... +........++.++.+|++|++++.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            47899999999999999999999999999998887654332222 11111111257889999999998887776      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-c-CC--------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-I-GG--------  161 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~-~~--------  161 (214)
                       ++|+|||+|+.....    .. ..  ....+++|+.++..+++++....   +..++|++||.+.. + +.        
T Consensus        76 -~~d~Vih~A~~~~~~----~~-~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~  144 (322)
T PLN02662         76 -GCEGVFHTASPFYHD----VT-DP--QAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVV  144 (322)
T ss_pred             -CCCEEEEeCCcccCC----CC-Ch--HHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcC
Confidence             689999999965321    11 11  24788999999999988876532   23579999996532 1 11        


Q ss_pred             -------CC-----CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 -------VT-----SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 -------~~-----~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                             |.     ...|+.+|.+.+.+++.+..+   .|+++..+.|+.+.+|...
T Consensus       145 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        145 DETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             CcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCC
Confidence                   10     137999999999888877654   4899999999999988643

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.81  E-value=2.3e-18  Score=137.57  Aligned_cols=175  Identities=19%  Similarity=0.173  Sum_probs=132.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++.|+||||||.||++|++.|+++||.|..+.|+++..+.. +.+.+..+...+...+..|++|+++++++++      
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLLDEGSFDKAID------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEeccccccchHHHHHh------
Confidence            679999999999999999999999999999999998874332 2333333333357889999999999999999      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-CCC------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-VTS------  164 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~~~------  164 (214)
                       ++|+|||.|....+..   .  +  .-.+.++..+.|+..+.+++...-   .-.++|++||.++..+. +..      
T Consensus        78 -gcdgVfH~Asp~~~~~---~--~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   78 -GCDGVFHTASPVDFDL---E--D--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             -CCCEEEEeCccCCCCC---C--C--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCccc
Confidence             7999999999875421   1  1  124788999989988888775533   24579999999988754 221      


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 ---------------HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ---------------~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                                     ..|+.||.-.+.-+--++.|   +|+....|+|+.|-.|....
T Consensus       147 dE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  147 DEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             ccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCccc
Confidence                           14777776555444444444   47999999999999888765

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=1.9e-18  Score=142.51  Aligned_cols=159  Identities=15%  Similarity=0.050  Sum_probs=114.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch--hhHHHHhhccC--CCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG--ESVCEDISSSS--SSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~--~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      |++|||||+|+||++++++|+++|++|++++|+.+..  +.. +.+....  .....+.++.+|++|.+++.++++..  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRI-EHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhh-hhhhhccccccccceeEEEeccCCHHHHHHHHHhC--
Confidence            6899999999999999999999999999998875421  111 1111100  00124788999999999999888864  


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc----------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI----------  159 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------  159 (214)
                         ++|+|||+|+.....      ...+.....+++|+.|+..+++++.+.-.+ ...++|++||.+.+-          
T Consensus        78 ---~~d~ViH~Aa~~~~~------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~  147 (343)
T TIGR01472        78 ---KPTEIYNLAAQSHVK------VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNET  147 (343)
T ss_pred             ---CCCEEEECCcccccc------hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCC
Confidence               589999999975421      122234567789999999999988764211 123689999954321          


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 -GGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 -~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                       +.....+|+.||.+.+.+++.++.++
T Consensus       148 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       148 TPFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence             11234689999999999999998775

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=5.2e-18  Score=140.19  Aligned_cols=172  Identities=17%  Similarity=0.225  Sum_probs=122.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC-CCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS-SSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+.+|+++||||+|+||++++++|+++|++|++++|.........+.+.... ....++.++.+|++|++++.+++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            3567899999999999999999999999999998875433222222221111 01124678899999999998887753 


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc---------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---------  159 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  159 (214)
                          ++|+|||+|+.....      .+.+++...+++|+.++..+.+++    .+.+..++|++||.+.+.         
T Consensus        81 ----~~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG------ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             ----CCCEEEEccccCCcc------ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence                799999999975321      133457889999999999877754    334446899999964321         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q 044923          160 --GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPY  198 (214)
Q Consensus       160 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg  198 (214)
                        +......|+.+|.+.+.+++.++.+  ..++++..+.|+
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~  185 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYF  185 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeec
Confidence              1113468999999999999988765  235666665543

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.78  E-value=2.5e-17  Score=136.16  Aligned_cols=176  Identities=18%  Similarity=0.065  Sum_probs=128.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC--CCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS--SSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ..+++|++|||||+|.||.+++++|.++|++|++++|................  ....++.++.+|++|.+++.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            45788999999999999999999999999999999886543222222221110  011246788999999988877776 


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----  161 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----  161 (214)
                            .+|+|||.|+.....      ...++....+++|+.|+..+.+++..    .+..++|++||.+.+...     
T Consensus        90 ------~~d~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~  153 (348)
T PRK15181         90 ------NVDYVLHQAALGSVP------RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPK  153 (348)
T ss_pred             ------CCCEEEECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCC
Confidence                  589999999975321      12233456799999999988877643    344579999986443211     


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 ------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                            .....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..|.
T Consensus       154 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        154 IEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRR  199 (348)
T ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcC
Confidence                  12357999999999998887665   47999999999998875

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.77  E-value=4e-17  Score=132.60  Aligned_cols=169  Identities=17%  Similarity=0.167  Sum_probs=123.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++||||||+||.+++++|+++|  .+|++..|..... .+..+.+..    ...+.++.+|++|++++.++++..    
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED----NPRYRFVKGDIGDRELVSRLFTEH----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc----CCCcEEEEcCCcCHHHHHHHHhhc----
Confidence            48999999999999999999987  6788876632111 111111111    124678899999999998888753    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  160 (214)
                       ++|+|||+|+....      +.+.+.++..+++|+.++..+++++.+.+.   ..++|++||...+..           
T Consensus        73 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~  142 (317)
T TIGR01181        73 -QPDAVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETT  142 (317)
T ss_pred             -CCCEEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCC
Confidence             58999999997532      223456778899999999998887766443   236999998543221           


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 -GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                       ......|+.+|.+.+.+++.++.+   .++++..+.|+.+..+.
T Consensus       143 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       143 PLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPY  184 (317)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCC
Confidence             112347999999999999998776   37899999999887664

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.77  E-value=5.1e-17  Score=134.36  Aligned_cols=171  Identities=18%  Similarity=0.177  Sum_probs=121.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCc--chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAK-VLIADIKDD--LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|||||+|+||++++++|+++|.+ |+.+++...  ..+... .+.   . ..++.++.+|++|.+++.+++++.    
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~---~-~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS---D-SERYVFEHADICDRAELDRIFAQH----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc---c-CCceEEEEecCCCHHHHHHHHHhc----
Confidence            5899999999999999999999987 444444321  111111 111   1 124677899999999998888752    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-----CCCeEEEecCCCcccC------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-----GRGSIISTASVCGVIG------  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~------  160 (214)
                       ++|+|||+|+.....      .+.+..+..+++|+.|+..+++++.+.|.+.     +..++|++||.+.+..      
T Consensus        73 -~~d~vih~A~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         73 -QPDAVMHLAAESHVD------RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             -CCCEEEECCcccCCc------chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence             799999999975321      1223456789999999999999998876421     2347999998643321      


Q ss_pred             ---------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 ---------------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 ---------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                                     ......|+.+|.+.+.+++.++.++   |+++..+.|+.+..|.
T Consensus       146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY  201 (352)
T ss_pred             ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence                           1123589999999999999988764   5666767777666554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.76  E-value=2.8e-17  Score=136.74  Aligned_cols=176  Identities=16%  Similarity=0.175  Sum_probs=125.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC--C-CCCCceEEEeeCCCHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS--S-SANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~-~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +.++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+. .+....  + ...++.++.+|++|.+++.++++ 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            567899999999999999999999999999998888765544432 221110  0 01246788999999999988887 


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-c----CC
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-I----GG  161 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~----~~  161 (214)
                            ++|.+||.|+...+..  ...    .+....++|+.+...+.+++...   .+-.++|++||..+. +    +.
T Consensus       128 ------~~d~V~hlA~~~~~~~--~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~  192 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAG--LSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPH  192 (367)
T ss_pred             ------hccEEEecCeeecccc--ccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCC
Confidence                  5789999998764321  111    11244567887777777765432   134479999996311 1    00


Q ss_pred             --C----------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 --V----------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 --~----------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                        +                ....|+.+|.+.+.+++.++.+   +|++++.+.|+.+.+|..
T Consensus       193 ~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        193 DLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGF  251 (367)
T ss_pred             CCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCC
Confidence              0                1236999999999999888765   589999999999999864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.76  E-value=2.9e-17  Score=134.14  Aligned_cols=160  Identities=21%  Similarity=0.199  Sum_probs=122.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++++||||+|+||+.+++.|+++|++|++++|+.+.....    .     ...+.++.+|++|.+++.++++       +
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-----~~~~~~~~~D~~~~~~l~~~~~-------~   64 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E-----GLDVEIVEGDLRDPASLRKAVA-------G   64 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c-----cCCceEEEeeCCCHHHHHHHHh-------C
Confidence            3699999999999999999999999999999976543221    1     1247789999999998888776       6


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  162 (214)
                      +|++||+|+.....        .+++...+++|+.++..+.+++..    .+.+++|++||...+...+           
T Consensus        65 ~d~vi~~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~  132 (328)
T TIGR03466        65 CRALFHVAADYRLW--------APDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPS  132 (328)
T ss_pred             CCEEEEeceecccC--------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCC
Confidence            89999999864211        123567889999998888887654    3446899999976543211           


Q ss_pred             ----CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 ----TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 ----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                          ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..+.
T Consensus       133 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~  175 (328)
T TIGR03466       133 SLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPR  175 (328)
T ss_pred             CcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCC
Confidence                1347999999999999988765   47999999999887654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.76  E-value=1.1e-16  Score=131.62  Aligned_cols=169  Identities=17%  Similarity=0.176  Sum_probs=118.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|+||+++++.|+++|++|+++.|..+........+.....  .++.++.+|++|.+++.++++.     .++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALLTEILHD-----HAI   74 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC--CCceEEEccCCCHHHHHHHHhc-----CCC
Confidence            589999999999999999999999999887654332222222222111  2457789999999998888763     279


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC------------C
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG------------V  162 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~  162 (214)
                      |++||+|+.....      ...+.....+++|+.++..+.+++    ++.+.+++|++||.+.+...            .
T Consensus        75 d~vvh~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~  144 (338)
T PRK10675         75 DTVIHFAGLKAVG------ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_pred             CEEEECCcccccc------chhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCC
Confidence            9999999975321      112334568899998888877654    34455689999996533110            2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      ....|+.+|.+.+.+++.++.+.  .++++..+.|+.+..
T Consensus       145 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g  182 (338)
T PRK10675        145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVG  182 (338)
T ss_pred             CCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecC
Confidence            35689999999999999987653  246666666544433

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.75  E-value=9.3e-17  Score=126.92  Aligned_cols=168  Identities=17%  Similarity=0.170  Sum_probs=112.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      ..++++++||||+|+||++++++|+++|++|+++.|+.+..+...   ..    ..++.++.+|++|. +++.+.+   .
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~----~~~~~~~~~Dl~d~~~~l~~~~---~   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---PQ----DPSLQIVRADVTEGSDKLVEAI---G   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---cc----CCceEEEEeeCCCCHHHHHHHh---h
Confidence            356799999999999999999999999999999888875433221   11    12578899999983 3332222   0


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc---CCCCCc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---GGVTSH  165 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---~~~~~~  165 (214)
                         .++|++|+++|..... .+         ...+++|+.+...+++++    .+.+.++||++||.....   +.+...
T Consensus        84 ---~~~d~vi~~~g~~~~~-~~---------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~  146 (251)
T PLN00141         84 ---DDSDAVICATGFRRSF-DP---------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNP  146 (251)
T ss_pred             ---cCCCEEEECCCCCcCC-CC---------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCc
Confidence               2799999999864211 11         112467887777777765    345567899999976432   222334


Q ss_pred             cchhhHHHHHHHHHHHHHH--HccCCcEEEEEeCCcccCcc
Q 044923          166 AYTSSKHGVVGLMKNTAVE--LGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e--~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .|...|.+...+...+..|  +...|++++.|.||++.++.
T Consensus       147 ~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        147 AYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDP  187 (251)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCC
Confidence            5666665444333333333  45679999999999998765

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.4e-16  Score=134.24  Aligned_cols=174  Identities=20%  Similarity=0.228  Sum_probs=142.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++||+++||||+|-||+++++++++.+.. +++.+|++.+.-....++....+ ..+..++-+|+.|.+.+.++++.. 
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcC-
Confidence            478999999999999999999999999865 88889999888888888887654 346788999999999999998854 


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                          ++|+++|.|+.-.  . |.-   +..+...+.+|++|+.++++++...    +-.++|++|+--+..|.   ..||
T Consensus       325 ----kvd~VfHAAA~KH--V-Pl~---E~nP~Eai~tNV~GT~nv~~aa~~~----~V~~~V~iSTDKAV~Pt---NvmG  387 (588)
T COG1086         325 ----KVDIVFHAAALKH--V-PLV---EYNPEEAIKTNVLGTENVAEAAIKN----GVKKFVLISTDKAVNPT---NVMG  387 (588)
T ss_pred             ----CCceEEEhhhhcc--C-cch---hcCHHHHHHHhhHhHHHHHHHHHHh----CCCEEEEEecCcccCCc---hHhh
Confidence                6999999999742  1 222   2335788899999999999888664    34569999996665433   4789


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      ++|...+.++.+++.+....+-++.+|.=|.|-.
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence            9999999999999987765567888888887753

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.73  E-value=2.4e-16  Score=128.53  Aligned_cols=168  Identities=17%  Similarity=0.198  Sum_probs=121.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|+||++++++|+++|++|++.+|...............    .++..+.+|+++++++.++++.     +++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~-----~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI----TRVTFVEGDLRDRELLDRLFEE-----HKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc----cceEEEECCCCCHHHHHHHHHh-----CCC
Confidence            4799999999999999999999999988766433222221221111    1467789999999999888763     479


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  163 (214)
                      |++||+||.....      ...++....++.|+.++..+++.+.    +.+..++|++||...+...           ..
T Consensus        72 d~vv~~ag~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~  141 (328)
T TIGR01179        72 DAVIHFAGLIAVG------ESVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAVYGEPSSIPISEDSPLGP  141 (328)
T ss_pred             cEEEECccccCcc------hhhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhhcCCCCCCCccccCCCCC
Confidence            9999999975321      1233456778899999988877653    3344689999886543211           12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ...|+.+|++.+.+++.++.+.  .++++..+.|+.+..+
T Consensus       142 ~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       142 INPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA  179 (328)
T ss_pred             CCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence            3679999999999999987652  4789999998777665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=5.4e-16  Score=121.14  Aligned_cols=169  Identities=17%  Similarity=0.151  Sum_probs=129.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|||||.|+||.+.++.+.++..  +|+.++.-.  .+.+.+.. +...    .+..++++|++|.+.+.+++++-  
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~-~~~~----~~~~fv~~DI~D~~~v~~~~~~~--   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD-VEDS----PRYRFVQGDICDRELVDRLFKEY--   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh-hhcC----CCceEEeccccCHHHHHHHHHhc--
Confidence            4689999999999999999998865  366665421  22222222 2211    26799999999999999998854  


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-----------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-----------  158 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------  158 (214)
                         ++|+++|-|+-.      ..|.+..+....+++|+.|++.+++++..+..+   -+++.+|.-.-+           
T Consensus        74 ---~~D~VvhfAAES------HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~Ft  141 (340)
T COG1088          74 ---QPDAVVHFAAES------HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFT  141 (340)
T ss_pred             ---CCCeEEEechhc------cccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcc
Confidence               799999999954      367788888999999999999999999887754   468888863221           


Q ss_pred             --cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          159 --IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       159 --~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                        -|+.+.++|++|||+...|++++...+   |+.+....|..-..|.
T Consensus       142 E~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPy  186 (340)
T COG1088         142 ETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPY  186 (340)
T ss_pred             cCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCC
Confidence              134456799999999999999999875   7888877776555554

>PLN02427 UDP-apiose/xylose synthase

Probab=99.72  E-value=3.5e-16  Score=130.98  Aligned_cols=172  Identities=16%  Similarity=0.190  Sum_probs=120.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+.+++|||||+|.||++++++|+++ |++|++++|+.+..+.+......  ....++.++.+|++|.+.+.++++   
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~--~~~~~~~~~~~Dl~d~~~l~~~~~---   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV--PWSGRIQFHRINIKHDSRLEGLIK---   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc--cCCCCeEEEEcCCCChHHHHHHhh---
Confidence            356678999999999999999999998 58999988875443222111000  011257889999999998887776   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------  161 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  161 (214)
                          .+|+|||+|+...+..  ..    .+....+..|+.+...+.+++..    .+ .++|++||...+-..       
T Consensus        86 ----~~d~ViHlAa~~~~~~--~~----~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e  150 (386)
T PLN02427         86 ----MADLTINLAAICTPAD--YN----TRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPK  150 (386)
T ss_pred             ----cCCEEEEcccccChhh--hh----hChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCc
Confidence                5799999999754321  11    11234456799888887776543    23 479999996432100       


Q ss_pred             --C------------------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 --V------------------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 --~------------------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                        |                        ....|+.+|.+.+.+++.++..   .|+++..+.|+.+..|.
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence              0                        1136999999999988876543   58999999999998875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.72  E-value=2.1e-16  Score=126.73  Aligned_cols=167  Identities=23%  Similarity=0.286  Sum_probs=123.4

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           17 LITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        17 lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      |||||+|.||.+|+++|.++|  +.|.+.+++......  ......    ....++.+|++|++++.++++       ++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~----~~~~~~~~Di~d~~~l~~a~~-------g~   67 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS----GVKEYIQGDITDPESLEEALE-------GV   67 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc----cceeEEEeccccHHHHHHHhc-------CC
Confidence            699999999999999999999  678888776543211  111111    122389999999999999988       78


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------------
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------------  161 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------  161 (214)
                      |+|||.|+.....       .....+.++++|+.|+-.+++++..    .+-.++|++||.+...+.             
T Consensus        68 d~V~H~Aa~~~~~-------~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   68 DVVFHTAAPVPPW-------GDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             ceEEEeCcccccc-------CcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999976432       1334688999999998888887754    456789999998876541             


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHH-HHc-cCCcEEEEEeCCcccCccccc
Q 044923          162 ----VTSHAYTSSKHGVVGLMKNTAV-ELG-RFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       162 ----~~~~~y~~sK~a~~~l~~~la~-e~~-~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                          .....|+.||+..+.++..... ++. ...++..+|.|..|..|.-..
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~  188 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR  188 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccc
Confidence                1224899999998888766554 111 125899999999998876443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=1.6e-15  Score=118.91  Aligned_cols=155  Identities=19%  Similarity=0.232  Sum_probs=119.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +++|||||.|-||++++.+|++.|++|+++++-...-.+.....        .+.++..|+.|.+.++++|++.     +
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~-----~   67 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEEN-----K   67 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhc-----C
Confidence            36999999999999999999999999999987554433332221        1578999999999999999865     8


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT----------  163 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  163 (214)
                      +|.|||.||...      ...+.+...+.++.|+.|+..+++++..    .+-..|||.||++.+ +.|.          
T Consensus        68 idaViHFAa~~~------VgESv~~Pl~Yy~NNv~gTl~Ll~am~~----~gv~~~vFSStAavY-G~p~~~PI~E~~~~  136 (329)
T COG1087          68 IDAVVHFAASIS------VGESVQNPLKYYDNNVVGTLNLIEAMLQ----TGVKKFIFSSTAAVY-GEPTTSPISETSPL  136 (329)
T ss_pred             CCEEEECccccc------cchhhhCHHHHHhhchHhHHHHHHHHHH----hCCCEEEEecchhhc-CCCCCcccCCCCCC
Confidence            999999999753      3446778899999999999987776644    444568877775543 3332          


Q ss_pred             --CccchhhHHHHHHHHHHHHHHHccCCcEEEEE
Q 044923          164 --SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV  195 (214)
Q Consensus       164 --~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v  195 (214)
                        ..+|+.||...+.+.+.++.-.   +.++..+
T Consensus       137 ~p~NPYG~sKlm~E~iL~d~~~a~---~~~~v~L  167 (329)
T COG1087         137 APINPYGRSKLMSEEILRDAAKAN---PFKVVIL  167 (329)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHhC---CCcEEEE
Confidence              3489999999999999998764   3444443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.69  E-value=2.7e-15  Score=124.06  Aligned_cols=165  Identities=18%  Similarity=0.212  Sum_probs=116.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcch---hhHHHHhhccCC---C-C-CCceEEEeeCCCHH------
Q 044923           15 VALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLG---ESVCEDISSSSS---S-A-NGCSYVHCDVTKEK------   78 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~---~~~~~~~~~~~~---~-~-~~v~~~~~D~~~~~------   78 (214)
                      +++||||||+||++++++|+++|  ++|+++.|+.+..   +.+.+.+.....   . . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  6799999876532   122222221110   0 0 36788999998753      


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV  158 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  158 (214)
                      ....+.       ..+|++||||+.....         ..+...+++|+.++..+++.+..    .+..+++++||.+..
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~---------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV---------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC---------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEcccccc
Confidence            222222       3799999999976321         12566778999888887776644    333459999998665


Q ss_pred             cCCC----------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          159 IGGV----------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       159 ~~~~----------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ....                ....|+.+|.+.+.+.+.++.    .|++++.+.||.+.++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN  197 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence            4311                124799999999988876543    3899999999999876

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.68  E-value=2.5e-15  Score=117.15  Aligned_cols=163  Identities=23%  Similarity=0.311  Sum_probs=125.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      ||||||+|.||.+++++|.++|..|+.+.|+...........        ++.++.+|++|.++++++++..     .+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~dl~~~~~~~~~~~~~-----~~d   67 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--------NVEFVIGDLTDKEQLEKLLEKA-----NID   67 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--------TEEEEESETTSHHHHHHHHHHH-----TES
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--------eEEEEEeecccccccccccccc-----Cce
Confidence            699999999999999999999999888877765443322222        5788999999999999999876     789


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CCC
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VTS  164 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~  164 (214)
                      .+||.|+....      ..+.+.....++.|+.+...+.+.+..    .+..++|++||...+...           ...
T Consensus        68 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~  137 (236)
T PF01370_consen   68 VVIHLAAFSSN------PESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPL  137 (236)
T ss_dssp             EEEEEBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHS
T ss_pred             EEEEeeccccc------ccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence            99999997421      112345678888898777776666644    434679999995443222           123


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ..|+.+|...+.+.+.+..+.   ++++..+.|+.+..+.
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  138 SPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccc---cccccccccccccccc
Confidence            569999999999999988764   8999999999998877

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.67  E-value=9.1e-17  Score=127.30  Aligned_cols=167  Identities=18%  Similarity=0.202  Sum_probs=119.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCc----eEEEeeCCCHHHHHHHHHHHHHH
Q 044923           16 ALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGC----SYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v----~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|||||+|-||++++++|++.+. .+++.++++..+-.+.+++...... .++    ..+.+|++|.+.+..++++.   
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~-~~v~~~~~~vigDvrd~~~l~~~~~~~---   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPD-PKVRFEIVPVIGDVRDKERLNRIFEEY---   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC---TTCEEEEE--CTSCCHHHHHHHHTT-----
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccc-cCcccccCceeecccCHHHHHHHHhhc---
Confidence            69999999999999999999985 5999999999998888888543321 123    34578999999999998765   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                        ++|++||.|+.-.-   +..+.   ...+.+++|+.|+..+++++..+    +-.++|++|+--+..   +...||+|
T Consensus        77 --~pdiVfHaAA~KhV---pl~E~---~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~---PtnvmGat  141 (293)
T PF02719_consen   77 --KPDIVFHAAALKHV---PLMED---NPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVN---PTNVMGAT  141 (293)
T ss_dssp             --T-SEEEE------H---HHHCC---CHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-----SHHHHH
T ss_pred             --CCCEEEEChhcCCC---ChHHh---CHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCC---CCcHHHHH
Confidence              89999999997421   12222   35788999999999999888764    345799999966554   33689999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                      |...+.++.+.+......+.++.+|.=|.|-
T Consensus       142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVl  172 (293)
T PF02719_consen  142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVL  172 (293)
T ss_dssp             HHHHHHHHHHHCCTSSSS--EEEEEEE-EET
T ss_pred             HHHHHHHHHHHhhhCCCCCcEEEEEEeccee
Confidence            9999999999998876677888888877764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.66  E-value=3.5e-15  Score=124.33  Aligned_cols=165  Identities=20%  Similarity=0.202  Sum_probs=119.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|++|||||+|.||+++++.|.++|++|+.++|.....      ....   ...+.++.+|++|.+++..+++      
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~---~~~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED---MFCHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc---cccceEEECCCCCHHHHHHHHh------
Confidence            678999999999999999999999999999998864311      0000   0124677899999888776654      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc------------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI------------  159 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------  159 (214)
                       ++|+|||.|+......  ..   ..+....++.|+.++..+.+++.    +.+..++|++||...+-            
T Consensus        85 -~~D~Vih~Aa~~~~~~--~~---~~~~~~~~~~N~~~t~nll~aa~----~~~vk~~V~~SS~~vYg~~~~~~~~~~~~  154 (370)
T PLN02695         85 -GVDHVFNLAADMGGMG--FI---QSNHSVIMYNNTMISFNMLEAAR----INGVKRFFYASSACIYPEFKQLETNVSLK  154 (370)
T ss_pred             -CCCEEEEcccccCCcc--cc---ccCchhhHHHHHHHHHHHHHHHH----HhCCCEEEEeCchhhcCCccccCcCCCcC
Confidence             6899999999754221  11   11224456788888887777654    33445799999964221            


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          160 -----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                           +......|+.+|.+.+.+++.++..   .|+++..+.|+.+..|.
T Consensus       155 E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        155 ESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF  201 (370)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence                 1223458999999999999887664   48999999999888874

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=5.8e-15  Score=123.71  Aligned_cols=164  Identities=13%  Similarity=0.156  Sum_probs=115.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH--HHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV--CEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~--~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++++||||||+||++++++|+++|++|+++.|+....+..  ........   .++.++.+|++|++++.++++.. 
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~---~~v~~v~~Dl~d~~~l~~~~~~~-  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL---PGAEVVFGDVTDADSLRKVLFSE-  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc---CCceEEEeeCCCHHHHHHHHHHh-
Confidence            4578999999999999999999999999999999986543211  11111111   25788999999999999888743 


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                        .+++|+||||++.....       .    ...+++|+.+...+.+++    ++.+.+++|++||.+...   ....|.
T Consensus       134 --~~~~D~Vi~~aa~~~~~-------~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~  193 (390)
T PLN02657        134 --GDPVDVVVSCLASRTGG-------V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQ  193 (390)
T ss_pred             --CCCCcEEEECCccCCCC-------C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHH
Confidence              12699999999853211       1    122456766665555544    445567899999987543   234678


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      .+|...+...+.     ...+++...+.|+.+..+
T Consensus       194 ~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~  223 (390)
T PLN02657        194 RAKLKFEAELQA-----LDSDFTYSIVRPTAFFKS  223 (390)
T ss_pred             HHHHHHHHHHHh-----ccCCCCEEEEccHHHhcc
Confidence            889887766543     235899999999877643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.65  E-value=1.1e-14  Score=129.85  Aligned_cols=174  Identities=18%  Similarity=0.201  Sum_probs=122.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++.|++|||||+|.||++++++|+++  +++|+.++|... .+... .+.... ...++.++.+|++|.+.+..++.. 
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-~~~~~-~l~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-CSNLK-NLNPSK-SSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-cchhh-hhhhcc-cCCCeEEEECCCCChHHHHHHHhh-
Confidence            467799999999999999999999998  678888877431 11111 111110 112578899999999887766532 


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccC------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIG------  160 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~------  160 (214)
                          .++|+|||+|+.....      ....+....+++|+.++..+.+++..    .+ ..++|++||...+-.      
T Consensus        79 ----~~~D~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~vyg~~~~~~~  144 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAD  144 (668)
T ss_pred             ----cCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchHHhCCCccccc
Confidence                2799999999975321      12233456789999888887776643    22 458999999643311      


Q ss_pred             --------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 --------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 --------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                              ......|+.+|.+.+.+++.+..+   .++++..+.|+.+..+.
T Consensus       145 ~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~  193 (668)
T PLN02260        145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN  193 (668)
T ss_pred             cCccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcC
Confidence                    112357999999999999988765   47889999999887664

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=1.2e-14  Score=118.00  Aligned_cols=162  Identities=25%  Similarity=0.308  Sum_probs=121.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc-
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL-   94 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i-   94 (214)
                      +|||||+|.||++++++|.++|++|+.++|.........          ..+.++.+|++|.+.+.+.++       .. 
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~-------~~~   65 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAK-------GVP   65 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHh-------cCC
Confidence            999999999999999999999999999998765443322          146788999999865555554       34 


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  163 (214)
                      |++||+|+......    .... +....+.+|+.++..+.+++..    .+..++|+.||.+...+.           +.
T Consensus        66 d~vih~aa~~~~~~----~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~  136 (314)
T COG0451          66 DAVIHLAAQSSVPD----SNAS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPP  136 (314)
T ss_pred             CEEEEccccCchhh----hhhh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCC
Confidence            99999999874321    1111 4567899999988888887765    445679997775544422           11


Q ss_pred             Cc--cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          164 SH--AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       164 ~~--~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ..  +|+.+|.+.+.+++.+..   ..|+.+..+.|+.+..|...
T Consensus       137 ~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         137 RPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCC
Confidence            11  499999999999999987   46899999999988766644

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.64  E-value=7.4e-15  Score=130.74  Aligned_cols=166  Identities=16%  Similarity=0.150  Sum_probs=120.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH-HHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD-IENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~   88 (214)
                      .+++++|||||+|.||++++++|+++ |++|+.++|.......    ...    ..++.++.+|++|.++ +.++++   
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~----~~~~~~~~gDl~d~~~~l~~~l~---  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG----HPRFHFVEGDISIHSEWIEYHIK---  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC----CCceEEEeccccCcHHHHHHHhc---
Confidence            56889999999999999999999986 7999999987643211    111    1246788999998655 344443   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----C--
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----G--  161 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~--  161 (214)
                          ++|+|||.|+...+..      ..++....+++|+.++..+.+++...    + .++|++||...+-.     .  
T Consensus       382 ----~~D~ViHlAa~~~~~~------~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E  446 (660)
T PRK08125        382 ----KCDVVLPLVAIATPIE------YTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDE  446 (660)
T ss_pred             ----CCCEEEECccccCchh------hccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCc
Confidence                6899999999765321      11223567899999999888877642    2 47999999643321     0  


Q ss_pred             --------C---CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 --------V---TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 --------~---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                              |   ....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..|..
T Consensus       447 ~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~  498 (660)
T PRK08125        447 DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRL  498 (660)
T ss_pred             cccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCc
Confidence                    1   1236999999999999988765   478999999998887753

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.64  E-value=6.1e-15  Score=116.70  Aligned_cols=159  Identities=19%  Similarity=0.249  Sum_probs=121.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +++||||||.|.||++++.+|.++|+.|+++++-........+..+.......++.+...|+.|.+.++++|++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            578999999999999999999999999999987443333333333333333457999999999999999999977     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------CC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------GG  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~  161 (214)
                      ++|.|+|-|+...-      ..+.+...+....|+.|++.+..    .|++.+...+|+.||+.-+-           +.
T Consensus        77 ~fd~V~Hfa~~~~v------geS~~~p~~Y~~nNi~gtlnlLe----~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAV------GESMENPLSYYHNNIAGTLNLLE----VMKAHNVKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhcc------chhhhCchhheehhhhhHHHHHH----HHHHcCCceEEEecceeeecCcceeeccCcCCC
Confidence            69999999998642      23456668999999999997655    45555566789888865442           11


Q ss_pred             C-CCccchhhHHHHHHHHHHHHHHHc
Q 044923          162 V-TSHAYTSSKHGVVGLMKNTAVELG  186 (214)
Q Consensus       162 ~-~~~~y~~sK~a~~~l~~~la~e~~  186 (214)
                      . ...+|+.+|.+++...+.+..-+.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc
Confidence            1 346899999999999998887653

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.63  E-value=1.1e-14  Score=120.31  Aligned_cols=162  Identities=19%  Similarity=0.194  Sum_probs=114.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC-CHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT-KEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~~~   91 (214)
                      +++|||||+|.||++++++|+++ |++|+.+.|+.+...    .+..    ...+.++.+|++ +.+.+.++++      
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~~----~~~~~~~~~Dl~~~~~~~~~~~~------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLVN----HPRMHFFEGDITINKEWIEYHVK------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhcc----CCCeEEEeCCCCCCHHHHHHHHc------
Confidence            46999999999999999999986 699999887653221    1111    124788899998 6666655544      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC----------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG----------  161 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  161 (214)
                       ++|+|||+|+...+..      ..++.+..+++|+.+...+.+++..    .+ .++|++||...+...          
T Consensus        68 -~~d~ViH~aa~~~~~~------~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~  135 (347)
T PRK11908         68 -KCDVILPLVAIATPAT------YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEAS  135 (347)
T ss_pred             -CCCEEEECcccCChHH------hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccc
Confidence             6899999999754321      1223456789999888887776643    33 479999996433210          


Q ss_pred             --------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 --------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 --------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                              .....|+.+|.+.+.+.+.++..   .|+++..+.|+.+..|.
T Consensus       136 ~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        136 PLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPG  183 (347)
T ss_pred             ccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCC
Confidence                    01126999999999998888754   47888888888776664

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.62  E-value=1.4e-14  Score=117.68  Aligned_cols=160  Identities=16%  Similarity=0.199  Sum_probs=110.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH--HcCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS--QYGK   93 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~~g~   93 (214)
                      +|||||+|.||++++++|+++|+.++++.|+.......             ..+..+|++|..+.+.+++++.+  .+++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            79999999999999999999999766665554322110             01123577776666666655543  3468


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------CC
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------GV  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~  162 (214)
                      +|+|||+|+.....     ..+.   ...++.|+.++..+.+++..    .+. ++|++||.+.+..           ..
T Consensus        69 ~d~Vih~A~~~~~~-----~~~~---~~~~~~n~~~t~~ll~~~~~----~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~  135 (308)
T PRK11150         69 IEAIFHEGACSSTT-----EWDG---KYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTDDFIEEREYEK  135 (308)
T ss_pred             ccEEEECceecCCc-----CCCh---HHHHHHHHHHHHHHHHHHHH----cCC-cEEEEcchHHhCcCCCCCCccCCCCC
Confidence            99999999964321     1122   34689999888887777643    333 5999999754321           11


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ....|+.+|.+.+.+++.+..+   .++++..+.|+.+..+.
T Consensus       136 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        136 PLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR  174 (308)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence            2357999999999998887654   47888888888877654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.60  E-value=9.7e-14  Score=110.46  Aligned_cols=184  Identities=11%  Similarity=0.092  Sum_probs=148.8

Q ss_pred             CcEEEEecC-CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGG-AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGa-s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ..+|||.|. +.-|++.+|.-|-++|+-|+++..+.+..+..+.+-      ...+..+..|..++.++...+.+..+..
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~------~~dI~~L~ld~~~~~~~~~~l~~f~~~L   76 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED------RPDIRPLWLDDSDPSSIHASLSRFASLL   76 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc------CCCCCCcccCCCCCcchHHHHHHHHHHh
Confidence            467899995 799999999999999999999998875443333322      1247778888888888877777776655


Q ss_pred             C--------------CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCCeEEEecC
Q 044923           92 G--------------KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP---AGRGSIISTAS  154 (214)
Q Consensus        92 g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~g~iv~~sS  154 (214)
                      .              .+..+|..-.... ..++++.++.+.|.+.++.|+..++..++.++|+++.   .+...|++.-|
T Consensus        77 ~~p~~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Ps  155 (299)
T PF08643_consen   77 SRPHVPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPS  155 (299)
T ss_pred             cCCCCCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCc
Confidence            3              3445555444443 3357889999999999999999999999999999998   44556667778


Q ss_pred             CCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          155 VCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       155 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ..+....|..++-.....++.+|++.|..|+++.||.|..+.-|.++-.
T Consensus       156 i~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  156 ISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            8888899999999999999999999999999999999999999988755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.59  E-value=5.4e-14  Score=114.30  Aligned_cols=162  Identities=18%  Similarity=0.220  Sum_probs=110.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           16 ALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +|||||+|.||.++++.|.++|+ .|++++|..... ... .+        ....+..|+++.+.++.+.+.   .++++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~--------~~~~~~~d~~~~~~~~~~~~~---~~~~~   67 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL--------ADLVIADYIDKEDFLDRLEKG---AFGKI   67 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh--------hheeeeccCcchhHHHHHHhh---ccCCC
Confidence            58999999999999999999998 688777654321 111 11        113456788887766655542   34589


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------CCC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------GVT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~  163 (214)
                      |+|||+|+....        ..+++...+++|+.++..+.+.+..    .+ .++|++||.+.+..           ...
T Consensus        68 D~vvh~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p  134 (314)
T TIGR02197        68 EAIFHQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERP  134 (314)
T ss_pred             CEEEECccccCc--------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCC
Confidence            999999996421        2234577889999988888887654    22 36999999654321           113


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ...|+.+|.+.+.+++....+. ..++++..+.|+.+..+.
T Consensus       135 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       135 LNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             CCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCC
Confidence            4579999999999988644332 225677777777766554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.59  E-value=4.7e-14  Score=113.38  Aligned_cols=143  Identities=20%  Similarity=0.231  Sum_probs=107.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||+|+||.+++++|.++|++|+++.|+                        .+|+.|++++.++++..     ++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~-----~~   51 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAI-----RP   51 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhC-----CC
Confidence            37999999999999999999999999988774                        36999999998887643     67


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  163 (214)
                      |++||+|+.....      .........+++|+.++..+.+.+..    .+ .++|++||.+.+.+.           ..
T Consensus        52 d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~  120 (287)
T TIGR01214        52 DAVVNTAAYTDVD------GAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNP  120 (287)
T ss_pred             CEEEECCcccccc------ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCC
Confidence            9999999975321      11233567789999888888877643    22 379999986433210           12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ...|+.+|.+.+.+++.+       +.++..+.|+.+..+.
T Consensus       121 ~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       121 LNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             cchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence            357999999988887765       4578889999887664

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.58  E-value=8.7e-14  Score=118.22  Aligned_cols=164  Identities=16%  Similarity=0.171  Sum_probs=113.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+++++|||||+|.||++++++|.++|++|++++|......+   ....... ..++.++..|+.++.     +      
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~-~~~~~~i~~D~~~~~-----l------  181 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFS-NPNFELIRHDVVEPI-----L------  181 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhcc-CCceEEEECCccChh-----h------
Confidence            467899999999999999999999999999988765322111   1111101 124677888887652     1      


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG----------  160 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  160 (214)
                       .++|+|||.|+...+..   .   ..+....+++|+.++..+.+++..    .+ .++|++||...+..          
T Consensus       182 -~~~D~ViHlAa~~~~~~---~---~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~  249 (442)
T PLN02206        182 -LEVDQIYHLACPASPVH---Y---KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETY  249 (442)
T ss_pred             -cCCCEEEEeeeecchhh---h---hcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCccc
Confidence             15899999999764321   1   123467889999999988887754    23 37999999754321          


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 ------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 ------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                            ......|+.+|.+.+.+++.+...   .|+++..+.|+.+..|.
T Consensus       250 ~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        250 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPR  296 (442)
T ss_pred             cccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCC
Confidence                  112357999999999988877654   36888888877776553

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.58  E-value=4.1e-14  Score=114.60  Aligned_cols=148  Identities=18%  Similarity=0.179  Sum_probs=108.2

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 044923           17 LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDI   96 (214)
Q Consensus        17 lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~   96 (214)
                      |||||+|.||.++++.|.++|++|+++.+.                       ..+|++|.++++++++..     ++|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~-----~~d~   52 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKE-----KPTY   52 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhcc-----CCCE
Confidence            699999999999999999999987765432                       137999999988887753     6899


Q ss_pred             EEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------------C-
Q 044923           97 MFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------------V-  162 (214)
Q Consensus        97 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------~-  162 (214)
                      |||+|+.....     ....++....++.|+.++..+++++..    .+..++|++||..-+.+.             + 
T Consensus        53 Vih~A~~~~~~-----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  123 (306)
T PLN02725         53 VILAAAKVGGI-----HANMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPP  123 (306)
T ss_pred             EEEeeeeeccc-----chhhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCC
Confidence            99999975311     001123456788899888877776654    334579999996432211             1 


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 --TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 --~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                        ....|+.+|.+.+.+.+.+..+   .++++..+.|+.+..+.
T Consensus       124 ~p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        124 EPTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPH  164 (306)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCC
Confidence              1224999999999888887655   37899999999887764

>PLN02996 fatty acyl-CoA reductase

Probab=99.56  E-value=1.8e-13  Score=117.70  Aligned_cols=178  Identities=15%  Similarity=0.158  Sum_probs=120.4

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCCcchh---hHHHHhh---------ccCC------CCCC
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGA---KVLIADIKDDLGE---SVCEDIS---------SSSS------SANG   66 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~---~vi~~~r~~~~~~---~~~~~~~---------~~~~------~~~~   66 (214)
                      ...++||+++||||||.||..+++.|++.+.   +|+++.|......   .+..++.         ...+      ...+
T Consensus         6 ~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k   85 (491)
T PLN02996          6 VQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK   85 (491)
T ss_pred             HHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence            3458999999999999999999999998653   4788887653211   1111111         1000      0136


Q ss_pred             ceEEEeeCCC-------HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHH
Q 044923           67 CSYVHCDVTK-------EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAAR  139 (214)
Q Consensus        67 v~~~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  139 (214)
                      +.++.+|+++       .+.++++++       .+|+|||+|+.....         +.....+++|+.|+..+.+.+..
T Consensus        86 v~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~---------~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         86 VTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD---------ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             EEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc---------CCHHHHHHHHHHHHHHHHHHHHh
Confidence            8899999984       333444444       689999999976421         23577889999999888776644


Q ss_pred             hhccCCCCeEEEecCCCcccCC---------C------------------------------------------------
Q 044923          140 VMKPAGRGSIISTASVCGVIGG---------V------------------------------------------------  162 (214)
Q Consensus       140 ~~~~~~~g~iv~~sS~~~~~~~---------~------------------------------------------------  162 (214)
                      .   .+..++|++||...+-..         +                                                
T Consensus       150 ~---~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (491)
T PLN02996        150 C---VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMER  226 (491)
T ss_pred             c---CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhH
Confidence            2   123468998886543110         0                                                


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          163 -----TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       163 -----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                           ....|+.||++.+.+++.++     .++++..+.|..|..+....+.
T Consensus       227 ~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~  273 (491)
T PLN02996        227 AKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFP  273 (491)
T ss_pred             HHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCC
Confidence                 11359999999998886543     3799999999999887655443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.56  E-value=1.1e-13  Score=112.04  Aligned_cols=145  Identities=14%  Similarity=0.124  Sum_probs=102.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|.||++++++|.++| +|+.++|...                    .+..|++|.+.+.++++..     ++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------------~~~~Dl~d~~~~~~~~~~~-----~~   55 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------------DYCGDFSNPEGVAETVRKI-----RP   55 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------------cccCCCCCHHHHHHHHHhc-----CC
Confidence            59999999999999999999999 7887776421                    1347999999998887753     68


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----CC------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----GG------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----~~------~~  163 (214)
                      |+|||+|+.....      ...++....+++|+.++..+.+++..    .+ .++|++||...+-     |.      ..
T Consensus        56 D~Vih~Aa~~~~~------~~~~~~~~~~~~N~~~~~~l~~aa~~----~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P  124 (299)
T PRK09987         56 DVIVNAAAHTAVD------KAESEPEFAQLLNATSVEAIAKAANE----VG-AWVVHYSTDYVFPGTGDIPWQETDATAP  124 (299)
T ss_pred             CEEEECCccCCcc------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEccceEECCCCCCCcCCCCCCCC
Confidence            9999999976432      12223466678899988888877654    22 3699998854321     11      12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ...|+.+|.+.+.+++.+..+       ...+.|+++..|
T Consensus       125 ~~~Yg~sK~~~E~~~~~~~~~-------~~ilR~~~vyGp  157 (299)
T PRK09987        125 LNVYGETKLAGEKALQEHCAK-------HLIFRTSWVYAG  157 (299)
T ss_pred             CCHHHHHHHHHHHHHHHhCCC-------EEEEecceecCC
Confidence            347999999999888765432       244555555544

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.55  E-value=1.9e-13  Score=111.59  Aligned_cols=147  Identities=12%  Similarity=0.069  Sum_probs=104.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||||.||++++++|.++|++|.++.|+.+.....    ..     ..+.++.+|++|++++.++++       ++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~-----~~v~~v~~Dl~d~~~l~~al~-------g~   65 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE-----WGAELVYGDLSLPETLPPSFK-------GV   65 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh-----cCCEEEECCCCCHHHHHHHHC-------CC
Confidence            699999999999999999999999999999986433211    11     147889999999999887776       68


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |++||+++...      .     +.....++|+.++..+.+++.    +.+-.++|++||.+... . ....|..+|...
T Consensus        66 d~Vi~~~~~~~------~-----~~~~~~~~~~~~~~~l~~aa~----~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~  128 (317)
T CHL00194         66 TAIIDASTSRP------S-----DLYNAKQIDWDGKLALIEAAK----AAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDI  128 (317)
T ss_pred             CEEEECCCCCC------C-----CccchhhhhHHHHHHHHHHHH----HcCCCEEEEeccccccc-c-CCChHHHHHHHH
Confidence            99999876321      0     122355677766666665553    44455899999865431 1 234678888877


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                      +.+.+       ..|+++..+.|+.+.
T Consensus       129 e~~l~-------~~~l~~tilRp~~~~  148 (317)
T CHL00194        129 EQKLK-------KSGIPYTIFRLAGFF  148 (317)
T ss_pred             HHHHH-------HcCCCeEEEeecHHh
Confidence            66543       247888888888554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.54  E-value=3.9e-13  Score=114.06  Aligned_cols=163  Identities=16%  Similarity=0.151  Sum_probs=113.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +.++++||||+|.||++++++|.++|++|++++|...........+..    ..++.++..|+.+..     +       
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~----~~~~~~~~~Di~~~~-----~-------  182 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG----NPRFELIRHDVVEPI-----L-------  182 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc----CCceEEEECcccccc-----c-------
Confidence            447899999999999999999999999999998754321111111111    124677788886642     1       


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc------------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI------------  159 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------  159 (214)
                      .++|+|||+|+...+..   .   .++....+++|+.++..+++++...    + .++|++||.+.+-            
T Consensus       183 ~~~D~ViHlAa~~~~~~---~---~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~  251 (436)
T PLN02166        183 LEVDQIYHLACPASPVH---Y---KYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYW  251 (436)
T ss_pred             cCCCEEEECceeccchh---h---ccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCcccc
Confidence            26899999999754321   1   1234678999999999888776543    2 3799999865331            


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          160 ----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 ----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                          +......|+.+|.+.+.+++.+...   .++++..+.|+.+..+.
T Consensus       252 ~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        252 GNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPR  297 (436)
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCC
Confidence                1112346999999999999887654   47888888887777654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.53  E-value=1.5e-13  Score=108.48  Aligned_cols=163  Identities=16%  Similarity=0.189  Sum_probs=96.8

Q ss_pred             EecCCChHHHHHHHHHHHcCC--eEEEEecCCcch---hhHHHHhhccCC-------CCCCceEEEeeCCCHH------H
Q 044923           18 ITGGAGSIGECAARLFSKHGA--KVLIADIKDDLG---ESVCEDISSSSS-------SANGCSYVHCDVTKEK------D   79 (214)
Q Consensus        18 ItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~---~~~~~~~~~~~~-------~~~~v~~~~~D~~~~~------~   79 (214)
                      ||||||.||..+.++|++++.  +|+++.|..+..   +.+.+.+.....       ...++.++.+|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999976  899999976432   222222221110       1347999999999854      3


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc
Q 044923           80 IENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI  159 (214)
Q Consensus        80 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  159 (214)
                      .+.+.+       .+|++||||+......         .+....++|+.|+..+++.+.    ..+..+++++||.....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~---------~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~  140 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA---------PYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAG  140 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTT
T ss_pred             hhcccc-------ccceeeecchhhhhcc---------cchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccC
Confidence            344433       6899999999875321         245577889988777666554    33334899999932211


Q ss_pred             CC--------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          160 GG--------------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       160 ~~--------------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ..                    .....|..||...+.+.+..+.+   .|+++..+.||.|-..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  141 SRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             S-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             CCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence            11                    11248999999999999888865   4789999999998763

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.53  E-value=6.7e-13  Score=99.78  Aligned_cols=141  Identities=17%  Similarity=0.203  Sum_probs=106.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      |+|+||||.+|+.++++|.++|++|.++.|++++.++           ..++.++++|+.|++++.+.++       +.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----------~~~~~~~~~d~~d~~~~~~al~-------~~d   62 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----------SPGVEIIQGDLFDPDSVKAALK-------GAD   62 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----------CTTEEEEESCTTCHHHHHHHHT-------TSS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----------ccccccceeeehhhhhhhhhhh-------hcc
Confidence            6899999999999999999999999999999876554           1368999999999988888777       799


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC---------cc
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS---------HA  166 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------~~  166 (214)
                      .+|+++|....           +            ...++.+.+.+++.+..++|++||.......+..         ..
T Consensus        63 ~vi~~~~~~~~-----------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~  119 (183)
T PF13460_consen   63 AVIHAAGPPPK-----------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPE  119 (183)
T ss_dssp             EEEECCHSTTT-----------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHH
T ss_pred             hhhhhhhhhcc-----------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhh
Confidence            99999985321           1            3445566677777777799999998866544432         13


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      |...|...+.+.       ...+++...+.|+.+..+.
T Consensus       120 ~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  120 YARDKREAEEAL-------RESGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             HHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTT
T ss_pred             hHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCC
Confidence            444444333222       2358999999999998765

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.47  E-value=2.8e-12  Score=114.37  Aligned_cols=163  Identities=18%  Similarity=0.146  Sum_probs=110.4

Q ss_pred             EEEEecCCChHHHHHHHHHH--HcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH--HHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFS--KHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI--ENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~--~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~--~~~~~~~~~~   90 (214)
                      ++|||||||.||++++++|+  ++|++|+++.|+... ....... .... ..++.++.+|++|++..  ...++++   
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~-~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~l---   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALA-AYWG-ADRVVPLVGDLTEPGLGLSEADIAEL---   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHH-HhcC-CCcEEEEecccCCccCCcCHHHHHHh---
Confidence            69999999999999999999  578999999996432 2222211 1111 12578899999985321  1112222   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  161 (214)
                       .++|++||+|+.....      .+   .....++|+.++..+.+.+.    +.+..++|++||.......         
T Consensus        76 -~~~D~Vih~Aa~~~~~------~~---~~~~~~~nv~gt~~ll~~a~----~~~~~~~v~~SS~~v~g~~~~~~~e~~~  141 (657)
T PRK07201         76 -GDIDHVVHLAAIYDLT------AD---EEAQRAANVDGTRNVVELAE----RLQAATFHHVSSIAVAGDYEGVFREDDF  141 (657)
T ss_pred             -cCCCEEEECceeecCC------CC---HHHHHHHHhHHHHHHHHHHH----hcCCCeEEEEeccccccCccCccccccc
Confidence             3799999999975321      12   24566889888777666553    3445679999987654211         


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          162 ----VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       162 ----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                          +....|+.+|...+.+.+.      ..|+++..+.|+.+..+
T Consensus       142 ~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        142 DEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             hhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence                1235699999999888753      24799999999988764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.45  E-value=2.1e-11  Score=87.61  Aligned_cols=185  Identities=18%  Similarity=0.223  Sum_probs=130.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      -++|+|-||-+.+|.++++.|..+++-|.-++-.+..-    .         ..-.++..|-+=.++-+.+..++.+..+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~----A---------d~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----A---------DSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----c---------cceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            46799999999999999999999999887766543210    0         0113344555556677777788877663


Q ss_pred             --CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           93 --KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        93 --~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                        ++|.++|-||-.-.....-.+. ....+-+++-.+....+..+....++++  .|.+-......+.-+.|+...|+.+
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMA  146 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDL-VKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMA  146 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhh-hhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHH
Confidence              7999999999764321110110 1112334444444445555666666665  3566677777777889999999999


Q ss_pred             HHHHHHHHHHHHHHH--ccCCcEEEEEeCCcccCccccccCCCCC
Q 044923          171 KHGVVGLMKNTAVEL--GRFGIRVNCVSPYAVSSPMAKGFLKLDD  213 (214)
Q Consensus       171 K~a~~~l~~~la~e~--~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  213 (214)
                      |+|++.|+++|+.+-  -+.|--+..|.|-..+|||.+++.+..|
T Consensus       147 KaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD  191 (236)
T KOG4022|consen  147 KAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD  191 (236)
T ss_pred             HHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc
Confidence            999999999999884  3456778899999999999999987544

>PRK05865 hypothetical protein; Provisional

Probab=99.44  E-value=3.7e-12  Score=114.67  Aligned_cols=130  Identities=18%  Similarity=0.212  Sum_probs=100.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||+|+||++++++|+++|++|++++|+....      ..      ..+.++.+|++|.+++.++++       ++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~------~~v~~v~gDL~D~~~l~~al~-------~v   62 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WP------SSADFIAADIRDATAVESAMT-------GA   62 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cc------cCceEEEeeCCCHHHHHHHHh-------CC
Confidence            599999999999999999999999999998874211      11      146788999999999888776       68


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |++||+|+...+               .+++|+.++..+.++    +.+.+.+++|++||..              |.+.
T Consensus        63 D~VVHlAa~~~~---------------~~~vNv~GT~nLLeA----a~~~gvkr~V~iSS~~--------------K~aa  109 (854)
T PRK05865         63 DVVAHCAWVRGR---------------NDHINIDGTANVLKA----MAETGTGRIVFTSSGH--------------QPRV  109 (854)
T ss_pred             CEEEECCCcccc---------------hHHHHHHHHHHHHHH----HHHcCCCeEEEECCcH--------------HHHH
Confidence            999999985321               357888887765554    4455567899999953              7777


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      +.+.+       ..|+++..+.|+.+..+
T Consensus       110 E~ll~-------~~gl~~vILRp~~VYGP  131 (854)
T PRK05865        110 EQMLA-------DCGLEWVAVRCALIFGR  131 (854)
T ss_pred             HHHHH-------HcCCCEEEEEeceEeCC
Confidence            76553       24789999999888765

>PLN02778 3,5-epimerase/4-reductase

Probab=99.39  E-value=1.6e-11  Score=99.52  Aligned_cols=137  Identities=22%  Similarity=0.273  Sum_probs=90.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .+++|||||+|.||++++++|.++|++|++..                           .|++|.+.+...++..     
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~-----   56 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAV-----   56 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhc-----
Confidence            47799999999999999999999999886421                           2344455554444432     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC--ccc-----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC--GVI-----------  159 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~--~~~-----------  159 (214)
                      ++|+|||+||......   .+...++....+++|+.++..+++++...    +.. .+++||.+  +..           
T Consensus        57 ~~D~ViH~Aa~~~~~~---~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv~-~v~~sS~~vy~~~~~~p~~~~~~~  128 (298)
T PLN02778         57 KPTHVFNAAGVTGRPN---VDWCESHKVETIRANVVGTLTLADVCRER----GLV-LTNYATGCIFEYDDAHPLGSGIGF  128 (298)
T ss_pred             CCCEEEECCcccCCCC---chhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCC-EEEEecceEeCCCCCCCcccCCCC
Confidence            6899999999864321   11123456789999999999888877553    222 34444322  110           


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEE
Q 044923          160 -----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV  192 (214)
Q Consensus       160 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v  192 (214)
                           +.+....|+.+|.+.+.+++.++..   .++|+
T Consensus       129 ~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~  163 (298)
T PLN02778        129 KEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV  163 (298)
T ss_pred             CcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee
Confidence                 1112357999999999999887532   34555

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.38  E-value=4.5e-11  Score=104.48  Aligned_cols=129  Identities=15%  Similarity=0.183  Sum_probs=87.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCCcch---hhHHHHhh---------ccCC------CCCCce
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA---KVLIADIKDDLG---ESVCEDIS---------SSSS------SANGCS   68 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~---~vi~~~r~~~~~---~~~~~~~~---------~~~~------~~~~v~   68 (214)
                      .++||+++||||||.||..+++.|++.+.   +|+++.|.....   +.+.+++.         +..+      ...++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            46899999999999999999999998753   578887754322   12211211         1111      124688


Q ss_pred             EEEeeCCCHH------HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhc
Q 044923           69 YVHCDVTKEK------DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMK  142 (214)
Q Consensus        69 ~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  142 (214)
                      .+.+|+++++      ..+.+.+       .+|++||+|+....         .+.++..+++|+.|+..+++.+...- 
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f---------~~~~~~a~~vNV~GT~nLLelA~~~~-  258 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF---------DERYDVAIDINTRGPCHLMSFAKKCK-  258 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc---------ccCHHHHHHHHHHHHHHHHHHHHHcC-
Confidence            8999999872      3333333       68999999997631         13467789999999988887665421 


Q ss_pred             cCCCCeEEEecCCCc
Q 044923          143 PAGRGSIISTASVCG  157 (214)
Q Consensus       143 ~~~~g~iv~~sS~~~  157 (214)
                        ...++|++||...
T Consensus       259 --~lk~fV~vSTayV  271 (605)
T PLN02503        259 --KLKLFLQVSTAYV  271 (605)
T ss_pred             --CCCeEEEccCcee
Confidence              1235888888543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.37  E-value=1.3e-11  Score=100.79  Aligned_cols=173  Identities=17%  Similarity=0.175  Sum_probs=123.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++.+++||||+|.+|++++++|.+++  ..+.+.+..+.......+....   ...++..+++|+.|..++.+.++    
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~---~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF---RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc---cCCceeEEecchhhhhhhhhhcc----
Confidence            56889999999999999999999998  6788888766422222222211   12368889999999999888877    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC---------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG---------  160 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------  160 (214)
                         +. .++|+|+..-+.      ....+.+..+++|+.|+-.+..++    ++.+..++|.+||..-..+         
T Consensus        76 ---~~-~Vvh~aa~~~~~------~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E  141 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVPD------FVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDE  141 (361)
T ss_pred             ---Cc-eEEEeccccCcc------ccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCC
Confidence               66 666666643222      223367889999998866655555    5566678999999765542         


Q ss_pred             ---CC--CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          161 ---GV--TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       161 ---~~--~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                         .|  ....|+.||+-.+.+.+....   ..+....++.|-.|..|.-..+
T Consensus       142 ~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~  191 (361)
T KOG1430|consen  142 SLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRL  191 (361)
T ss_pred             CCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccc
Confidence               23  224899999987777766553   4568888999988887765543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.37  E-value=3.2e-12  Score=99.33  Aligned_cols=102  Identities=17%  Similarity=0.252  Sum_probs=78.0

Q ss_pred             cEEEEecC-CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGG-AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGa-s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .+=.||.. |||||+++|++|+++|++|+++++...        +...       ....+|+++.+++.++++++.+.++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~-------~~~~~Dv~d~~s~~~l~~~v~~~~g   79 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE-------PHPNLSIREIETTKDLLITLKELVQ   79 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc-------cCCcceeecHHHHHHHHHHHHHHcC
Confidence            45566655 679999999999999999999875311        1100       0135899999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK  135 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  135 (214)
                      ++|++|||||....  .++.+.+.++|++++.+|   .+++.+
T Consensus        80 ~iDiLVnnAgv~d~--~~~~~~s~e~~~~~~~~~---~~~~~~  117 (227)
T TIGR02114        80 EHDILIHSMAVSDY--TPVYMTDLEQVQASDNLN---EFLSKQ  117 (227)
T ss_pred             CCCEEEECCEeccc--cchhhCCHHHHhhhcchh---hhhccc
Confidence            99999999998643  356788999999886654   455554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.36  E-value=6.4e-11  Score=96.15  Aligned_cols=168  Identities=17%  Similarity=0.192  Sum_probs=115.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCc---chhhHHHHhhcc----CCCCCCceEEEeeCCC------HHH
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIADIKDD---LGESVCEDISSS----SSSANGCSYVHCDVTK------EKD   79 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~---~~~~~~~~~~~~----~~~~~~v~~~~~D~~~------~~~   79 (214)
                      +++++|||||.+|+.+.++|..+ .++|++..|-.+   ..+.+.+.+...    .....++..+..|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999876 568999888554   122333333211    1123478899999994      344


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc
Q 044923           80 IENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI  159 (214)
Q Consensus        80 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  159 (214)
                      .+++.+       .+|.+|||++.....         ..+.+....|+.|+..+.+.+    ...+...+.++||++...
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v---------~pYs~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV---------FPYSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc---------CcHHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeecc
Confidence            444444       689999999987422         225778889998887766644    333233488888865543


Q ss_pred             CC--------------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 GG--------------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 ~~--------------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ..                    .....|+.||-+.+.+++...    .+|+++..+.||.+-.+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeeccCc
Confidence            21                    112589999999887777655    4599999999999976654

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.34  E-value=8.2e-12  Score=97.34  Aligned_cols=173  Identities=17%  Similarity=0.096  Sum_probs=127.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|++||||-||--|.-+|+.|.++|+.|.-+.|+...-. ..............++.+..+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            699999999999999999999999999998877532221 111222222223345778899999999999999988    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-----------cC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-----------IG  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~  160 (214)
                       .+|-++|-|+..      +...+.++...+.+++-.|+.++..+..-+-.  ..-++..-||..-+           -|
T Consensus        78 -~PdEIYNLaAQS------~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~--~~~rfYQAStSE~fG~v~~~pq~E~TP  148 (345)
T COG1089          78 -QPDEIYNLAAQS------HVGVSFEQPEYTADVDAIGTLRLLEAIRILGE--KKTRFYQASTSELYGLVQEIPQKETTP  148 (345)
T ss_pred             -Cchhheeccccc------cccccccCcceeeeechhHHHHHHHHHHHhCC--cccEEEecccHHhhcCcccCccccCCC
Confidence             789999999864      45667778889999999999999887755442  23456666663322           14


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHH---ccCCcEEEEEeCC
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVEL---GRFGIRVNCVSPY  198 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~---~~~gi~v~~v~Pg  198 (214)
                      +.+.++|+++|......+..++..|   +-.||-+|.=.|.
T Consensus       149 FyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         149 FYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             CCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence            4566899999999988888888775   3456667755543

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=4.3e-11  Score=94.65  Aligned_cols=126  Identities=22%  Similarity=0.287  Sum_probs=100.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      +||||++|-+|.++++.|. .+..|+.++|.+                        +|++|++.+.+++++.     ++|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~i~~~-----~PD   52 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEVIRET-----RPD   52 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHHHHhh-----CCC
Confidence            8999999999999999999 778898876643                        7999999999999987     899


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------CC
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------TS  164 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~  164 (214)
                      ++||+|++..      .+.-..+.+..+.+|..++..+++++...     +..+|++|+-.-+-+..           ..
T Consensus        53 vVIn~AAyt~------vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~  121 (281)
T COG1091          53 VVINAAAYTA------VDKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKGGPYKETDTPNPL  121 (281)
T ss_pred             EEEECccccc------cccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCCCCCCCCCCCCCh
Confidence            9999999864      23334457899999999999988877542     34688998754332211           23


Q ss_pred             ccchhhHHHHHHHHHHHH
Q 044923          165 HAYTSSKHGVVGLMKNTA  182 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la  182 (214)
                      ..||.||.+.+..++...
T Consensus       122 nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         122 NVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             hhhhHHHHHHHHHHHHhC
Confidence            589999999888877664

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.31  E-value=1.4e-11  Score=99.32  Aligned_cols=142  Identities=18%  Similarity=0.206  Sum_probs=98.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|-||.++.+.|.++|+.++.+.|+                        ..|++|.+++.+++++.     ++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~-----~p   52 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAF-----KP   52 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHh-----CC
Confidence            68999999999999999999999999888665                        47999999999998876     78


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  163 (214)
                      |+|||+|+...+      +.-.++.+..+++|+.++..+++.+..    . ..++|++||..-+-+.           ..
T Consensus        53 d~Vin~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~----~-~~~li~~STd~VFdG~~~~~y~E~d~~~P  121 (286)
T PF04321_consen   53 DVVINCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKE----R-GARLIHISTDYVFDGDKGGPYTEDDPPNP  121 (286)
T ss_dssp             SEEEE------H------HHHHHSHHHHHHHHTHHHHHHHHHHHH----C-T-EEEEEEEGGGS-SSTSSSB-TTS----
T ss_pred             CeEeccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHH----c-CCcEEEeeccEEEcCCcccccccCCCCCC
Confidence            999999997532      112345678999999888887777654    2 3579999996443221           12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ...|+.+|...+...+...    +   +...+.++++..+
T Consensus       122 ~~~YG~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~  154 (286)
T PF04321_consen  122 LNVYGRSKLEGEQAVRAAC----P---NALILRTSWVYGP  154 (286)
T ss_dssp             SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESS
T ss_pred             CCHHHHHHHHHHHHHHHhc----C---CEEEEecceeccc
Confidence            3589999999887777622    1   4555666666655

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.28  E-value=2.8e-10  Score=85.17  Aligned_cols=85  Identities=14%  Similarity=0.218  Sum_probs=70.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||| |+|.++++.|+++|++|++.+|+.+..+.+...+..    ...+.++++|++|++++.++++.+.+.+|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~----~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i   76 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT----PESITPLPLDYHDDDALKLAIKSTIEKNGPF   76 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc----CCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999998 777789999999999999999987666555444432    1257888999999999999999999999999


Q ss_pred             cEEEeCCccc
Q 044923           95 DIMFNNAGIV  104 (214)
Q Consensus        95 d~li~~ag~~  104 (214)
                      |++|+..=..
T Consensus        77 d~lv~~vh~~   86 (177)
T PRK08309         77 DLAVAWIHSS   86 (177)
T ss_pred             eEEEEecccc
Confidence            9999776543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.26  E-value=3.5e-10  Score=108.60  Aligned_cols=172  Identities=16%  Similarity=0.142  Sum_probs=113.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC----CeEEEEecCCcchhhHH---HHhhccC----CCCCCceEEEeeCCCHHHH-
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG----AKVLIADIKDDLGESVC---EDISSSS----SSANGCSYVHCDVTKEKDI-   80 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g----~~vi~~~r~~~~~~~~~---~~~~~~~----~~~~~v~~~~~D~~~~~~~-   80 (214)
                      .++++||||+|.||.++++.|++++    .+|+++.|+....+...   +......    ....++.++.+|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5889999999999999999999887    77888888754432221   1111110    0112578899999864210 


Q ss_pred             -HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc
Q 044923           81 -ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI  159 (214)
Q Consensus        81 -~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  159 (214)
                       ...++++.   ..+|++||+|+....      ..+   +......|+.|+..+++.+..    .+..+++++||.+...
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHW------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecC------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecC
Confidence             11122222   268999999997632      112   334556799888887776543    3345799999965431


Q ss_pred             C-----------------CC-----------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          160 G-----------------GV-----------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 ~-----------------~~-----------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .                 .+           ....|+.||.+.+.+++..+.    .|+++..+.||.|..+.
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCC
Confidence            1                 00           123599999999988876543    48999999999997664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.25  E-value=1.5e-10  Score=93.12  Aligned_cols=141  Identities=16%  Similarity=0.163  Sum_probs=94.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC-
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK-   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-   93 (214)
                      +++||||||.||++++++|.++|++|.++.|+.+..+.            ..+..+.+|+.|++++.++++.. +.+.. 
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~------------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~   67 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG------------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPE   67 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC------------CCCccccccCCCHHHHHHHHhcc-cCcCCc
Confidence            38999999999999999999999999999998764311            13556778999999999988643 22335 


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|.++++++...       +  .  .            ...+.++..+++.+-.+||++||.....+.       ..+..
T Consensus        68 ~d~v~~~~~~~~-------~--~--~------------~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~  117 (285)
T TIGR03649        68 ISAVYLVAPPIP-------D--L--A------------PPMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQ  117 (285)
T ss_pred             eeEEEEeCCCCC-------C--h--h------------HHHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHH
Confidence            899999877421       0  0  0            011234455556666789999986543221       12222


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .+.+.+.      ..|+....+.|+++...+
T Consensus       118 ~~~~l~~------~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       118 VHAHLDS------LGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             HHHHHHh------ccCCCEEEEeccHHhhhh
Confidence            2222211      138999999999876544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.23  E-value=3.3e-10  Score=91.07  Aligned_cols=154  Identities=19%  Similarity=0.113  Sum_probs=91.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      +|||||+|.||.++++.|+++|++|+++.|+.+.......           ..  ..|... ..       ..+.+.++|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~--~~~~~~-~~-------~~~~~~~~D   59 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG--YKPWAP-LA-------ESEALEGAD   59 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee--eecccc-cc-------hhhhcCCCC
Confidence            5899999999999999999999999999998765422110           00  112221 11       122335799


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC--CeEEEecCCCcccCCC------CC---
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR--GSIISTASVCGVIGGV------TS---  164 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~------~~---  164 (214)
                      +|||+||.....    ...+.+.....+++|+.++..+.+++..    .+.  ..+|++|+.. .++..      ..   
T Consensus        60 ~Vvh~a~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~  130 (292)
T TIGR01777        60 AVINLAGEPIAD----KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVG-YYGTSEDRVFTEEDSP  130 (292)
T ss_pred             EEEECCCCCccc----ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEE-EeCCCCCCCcCcccCC
Confidence            999999964321    1223455677889999887776666643    322  2455455432 22111      11   


Q ss_pred             ---ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          165 ---HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       165 ---~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                         ..|+..+...+...+    .+...++++..+.|+.+..+
T Consensus       131 ~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~  168 (292)
T TIGR01777       131 AGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP  168 (292)
T ss_pred             CCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence               112222222222222    22345799999999999765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.22  E-value=6.3e-10  Score=99.57  Aligned_cols=142  Identities=21%  Similarity=0.236  Sum_probs=98.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ..+++|||||+|.||+++++.|.++|++|.+                           ...|++|.+.+.+.++..    
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~---------------------------~~~~l~d~~~v~~~i~~~----  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY---------------------------GKGRLEDRSSLLADIRNV----  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe---------------------------eccccccHHHHHHHHHhh----
Confidence            3467999999999999999999999987631                           113677888887776654    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-----------cC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-----------IG  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~  160 (214)
                       ++|+|||+|+.....   ..+...++....+++|+.++..+++++...    +. +++++||.+.+           .+
T Consensus       428 -~pd~Vih~Aa~~~~~---~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~-~~v~~Ss~~v~~~~~~~~~~~~~p  498 (668)
T PLN02260        428 -KPTHVFNAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCREN----GL-LMMNFATGCIFEYDAKHPEGSGIG  498 (668)
T ss_pred             -CCCEEEECCcccCCC---CCChHHhCHHHHHHHHhHHHHHHHHHHHHc----CC-eEEEEcccceecCCcccccccCCC
Confidence             789999999986432   122234456889999999999988887653    22 34555443211           01


Q ss_pred             C-------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEe
Q 044923          161 G-------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS  196 (214)
Q Consensus       161 ~-------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~  196 (214)
                      .       +....|+.+|.+.+.+++.+..   ..++++..+.
T Consensus       499 ~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        499 FKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence            1       2235899999999999987642   2456666555

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.13  E-value=1.2e-09  Score=85.48  Aligned_cols=164  Identities=19%  Similarity=0.186  Sum_probs=115.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ...+++++||||+|+||++++..|..+|..|++++.-..........+.    .......+..|+..+     ++.    
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~----~~~~fel~~hdv~~p-----l~~----   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI----GHPNFELIRHDVVEP-----LLK----   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc----cCcceeEEEeechhH-----HHH----
Confidence            3567999999999999999999999999889998875433322222211    122456777788765     444    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-------  162 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------  162 (214)
                         .+|-++|.|+..+|..   ...   ...+++.+|+.++......+.+..     .+++..|+..-+ +.|       
T Consensus        91 ---evD~IyhLAapasp~~---y~~---npvktIktN~igtln~lglakrv~-----aR~l~aSTseVY-gdp~~hpq~e  155 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPH---YKY---NPVKTIKTNVIGTLNMLGLAKRVG-----ARFLLASTSEVY-GDPLVHPQVE  155 (350)
T ss_pred             ---HhhhhhhhccCCCCcc---ccc---CccceeeecchhhHHHHHHHHHhC-----ceEEEeeccccc-CCcccCCCcc
Confidence               5789999999887642   222   237789999999988777665543     457777765433 222       


Q ss_pred             ----------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 ----------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 ----------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                                ..+.|...|...+.|+..+.++   .||.|....+-.+..|.
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPr  204 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPR  204 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCc
Confidence                      2357999999999998888876   57877777766665554

>PLN00016 RNA-binding protein; Provisional

Probab=99.08  E-value=2.1e-09  Score=89.98  Aligned_cols=149  Identities=19%  Similarity=0.231  Sum_probs=94.3

Q ss_pred             CCcEEEEe----cCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHH----HhhccCCCCCCceEEEeeCCCHHHHHHH
Q 044923           12 QGKVALIT----GGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE----DISSSSSSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        12 ~~k~~lIt----Gas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~----~~~~~~~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      ..+++|||    ||||.||.+++++|+++|++|+++.|+.........    ......  ...+.++.+|++|   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            44789999    999999999999999999999999998654322110    000000  0136788899876   3333


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      +.     ..++|+||++++..           .+               .++.++..+++.+-.++|++||.+.+.....
T Consensus       126 ~~-----~~~~d~Vi~~~~~~-----------~~---------------~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~  174 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGKD-----------LD---------------EVEPVADWAKSPGLKQFLFCSSAGVYKKSDE  174 (378)
T ss_pred             hc-----cCCccEEEeCCCCC-----------HH---------------HHHHHHHHHHHcCCCEEEEEccHhhcCCCCC
Confidence            21     13689999987620           11               1233444455555668999999754422111


Q ss_pred             C--------ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          164 S--------HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       164 ~--------~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .        .++. +|...+.+.+       ..++++..+.|+.+..+.
T Consensus       175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCC
Confidence            0        1112 6777766543       247899999999888664

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.06  E-value=6.1e-09  Score=87.64  Aligned_cols=182  Identities=13%  Similarity=0.188  Sum_probs=120.3

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcC--C-eEEEEecCCcc--h-hhHHHH--------hhccCC-CCCCceEEEe
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHG--A-KVLIADIKDDL--G-ESVCED--------ISSSSS-SANGCSYVHC   72 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g--~-~vi~~~r~~~~--~-~~~~~~--------~~~~~~-~~~~v~~~~~   72 (214)
                      ...++||+++||||||++|+-+.+.|++.-  . ++.++-|....  . +.+.+.        +.+..+ ...++..+.+
T Consensus         7 ~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~G   86 (467)
T KOG1221|consen    7 VQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAG   86 (467)
T ss_pred             HHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccc
Confidence            345899999999999999999999999864  2 46666664321  1 111111        112211 2246777888


Q ss_pred             eCCCHH------HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC
Q 044923           73 DVTKEK------DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR  146 (214)
Q Consensus        73 D~~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  146 (214)
                      |+++++      +.+.+++       .+|++||+|+....         .|.++..+.+|.+|+..+.+.+....+-   
T Consensus        87 Di~~~~LGis~~D~~~l~~-------eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~l---  147 (467)
T KOG1221|consen   87 DISEPDLGISESDLRTLAD-------EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVKL---  147 (467)
T ss_pred             cccCcccCCChHHHHHHHh-------cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhhh---
Confidence            998743      3333333       79999999998643         3457889999999999888876655443   


Q ss_pred             CeEEEecCCCcccC--------CCCC--------------------------------ccchhhHHHHHHHHHHHHHHHc
Q 044923          147 GSIISTASVCGVIG--------GVTS--------------------------------HAYTSSKHGVVGLMKNTAVELG  186 (214)
Q Consensus       147 g~iv~~sS~~~~~~--------~~~~--------------------------------~~y~~sK~a~~~l~~~la~e~~  186 (214)
                      ..++.+|.+.....        ++..                                -.|.-+|+-.+.+...-     
T Consensus       148 ~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----  222 (467)
T KOG1221|consen  148 KALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----  222 (467)
T ss_pred             heEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----
Confidence            35888888776621        1100                                14555555433333322     


Q ss_pred             cCCcEEEEEeCCcccCccccccCCCCC
Q 044923          187 RFGIRVNCVSPYAVSSPMAKGFLKLDD  213 (214)
Q Consensus       187 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~  213 (214)
                      +.++.+..+.|..|-+...+++.+|.|
T Consensus       223 ~~~lPivIiRPsiI~st~~EP~pGWid  249 (467)
T KOG1221|consen  223 AENLPLVIIRPSIITSTYKEPFPGWID  249 (467)
T ss_pred             ccCCCeEEEcCCceeccccCCCCCccc
Confidence            347899999999999999888888755

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.05  E-value=1.9e-09  Score=84.23  Aligned_cols=174  Identities=17%  Similarity=0.141  Sum_probs=122.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++.|.++||||.|.||...+..++..  .++.+.++.-.-.. ....+...    ...+-.++..|+.+...+..++.+ 
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~----n~p~ykfv~~di~~~~~~~~~~~~-   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR----NSPNYKFVEGDIADADLVLYLFET-   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc----cCCCceEeeccccchHHHHhhhcc-
Confidence            34489999999999999999999987  45555443311000 11111111    123568899999999888777653 


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------  159 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------  159 (214)
                          .++|.|+|-|+...      .+.+.-+-....+.|++++..+.+...-..   +..++|.+|+..-+-        
T Consensus        79 ----~~id~vihfaa~t~------vd~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~  145 (331)
T KOG0747|consen   79 ----EEIDTVIHFAAQTH------VDRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVV  145 (331)
T ss_pred             ----CchhhhhhhHhhhh------hhhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccc
Confidence                38999999999763      233344456778899999998888776544   235689998843321        


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          160 -----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       160 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                           +.| -.+|+++|+|.+++.+++...|   |+.+..+.-+.|..|.+-
T Consensus       146 ~E~s~~nP-tnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~  193 (331)
T KOG0747|consen  146 GEASLLNP-TNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQY  193 (331)
T ss_pred             cccccCCC-CCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcC
Confidence                 222 2489999999999999999875   789998888888877643

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=99.01  E-value=3.1e-09  Score=88.94  Aligned_cols=81  Identities=27%  Similarity=0.360  Sum_probs=62.8

Q ss_pred             CccCCcEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEe
Q 044923            9 PRLQGKVALITGG----------------AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC   72 (214)
Q Consensus         9 ~~~~~k~~lItGa----------------s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (214)
                      .+++||++|||||                ||++|+++|++|+++|++|++++++.+ .+       .  .    .....+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~--~----~~~~~~  249 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T--P----AGVKRI  249 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C--C----CCcEEE
Confidence            3589999999999                455999999999999999999987652 11       0  0    123468


Q ss_pred             eCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCC
Q 044923           73 DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        73 D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  106 (214)
                      |+++.+++.+.+.   +.++++|++|+|||+...
T Consensus       250 dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        250 DVESAQEMLDAVL---AALPQADIFIMAAAVADY  280 (399)
T ss_pred             ccCCHHHHHHHHH---HhcCCCCEEEEccccccc
Confidence            9998888766654   567899999999998643

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.99  E-value=2.8e-09  Score=85.98  Aligned_cols=84  Identities=23%  Similarity=0.359  Sum_probs=65.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC---cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKD---DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      .+++|+++|+|| ||+|++++..|++.|++ |.++.|+.   ++.+++.+++.....   .+.+..+|+++.+++.+.++
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~---~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP---ECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC---CceeEEechhhhhHHHhhhc
Confidence            467899999999 69999999999999997 99999987   566666666643322   34556789988777765554


Q ss_pred             HHHHHcCCccEEEeCCccc
Q 044923           86 TAVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~  104 (214)
                             ..|++|||....
T Consensus       199 -------~~DilINaTp~G  210 (289)
T PRK12548        199 -------SSDILVNATLVG  210 (289)
T ss_pred             -------cCCEEEEeCCCC
Confidence                   569999998765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.94  E-value=4.9e-09  Score=94.97  Aligned_cols=177  Identities=14%  Similarity=0.194  Sum_probs=135.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchh---hHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGE---SVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..|.++|+||-||.|.++|+.|.++|++ +++++|+--+--   ...+.++..   +..|.+-..|++..+..++++++-
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~---GVqV~vsT~nitt~~ga~~Li~~s 1843 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR---GVQVQVSTSNITTAEGARGLIEES 1843 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc---CeEEEEecccchhhhhHHHHHHHh
Confidence            4699999999999999999999999998 788888643322   223333332   234444455777666667776543


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                       .+.+.+-.++|-|.+....  .+++.+++.++++-+-.+.++.++-+........-  ..+|.+||...-.++.++.-|
T Consensus      1844 -~kl~~vGGiFnLA~VLRD~--LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L--dyFv~FSSvscGRGN~GQtNY 1918 (2376)
T KOG1202|consen 1844 -NKLGPVGGIFNLAAVLRDG--LIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL--DYFVVFSSVSCGRGNAGQTNY 1918 (2376)
T ss_pred             -hhcccccchhhHHHHHHhh--hhcccChhHHHhhhccceeeeeehhhhhhhhCccc--ceEEEEEeecccCCCCccccc
Confidence             4567899999999987543  68899999999999999999999887776666543  458899998888899999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAV  200 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v  200 (214)
                      +-+..+++.+++.-+.+    |..=.+|..|.|
T Consensus      1919 G~aNS~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1919 GLANSAMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred             chhhHHHHHHHHHhhhc----CCCcceeeeecc
Confidence            99999999999877665    445556666665

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.94  E-value=1.6e-08  Score=86.48  Aligned_cols=130  Identities=19%  Similarity=0.223  Sum_probs=88.8

Q ss_pred             CcEEE----EecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           13 GKVAL----ITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        13 ~k~~l----ItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      |..+|    |+||++|+|.++++.|...|+.|+.+.+.....     ..    ....++..+.+|.+..++         
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-----~~----~~~~~~~~~~~d~~~~~~---------   95 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-----AA----GWGDRFGALVFDATGITD---------   95 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-----cc----CcCCcccEEEEECCCCCC---------
Confidence            45556    888899999999999999999999876554311     00    000112222223332222         


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                                                 .+++.        +.+.+++..++.|.+  .|+||+++|.....   ....|+
T Consensus        96 ---------------------------~~~l~--------~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~  135 (450)
T PRK08261         96 ---------------------------PADLK--------ALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAA  135 (450)
T ss_pred             ---------------------------HHHHH--------HHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHH
Confidence                                       22221        334566777887764  47899999977653   334699


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                      ++|+++.+|+|+++.|+ ++|++++.|.|++..
T Consensus       136 ~akaal~gl~rsla~E~-~~gi~v~~i~~~~~~  167 (450)
T PRK08261        136 AAQRALEGFTRSLGKEL-RRGATAQLVYVAPGA  167 (450)
T ss_pred             HHHHHHHHHHHHHHHHh-hcCCEEEEEecCCCC
Confidence            99999999999999999 789999999998743

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.94  E-value=2.2e-08  Score=78.15  Aligned_cols=146  Identities=16%  Similarity=0.196  Sum_probs=91.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      ++|+||||.+|+.+++.|.+.+++|.++.|+..  .+..+.+...     .+.++.+|..|++++.++++       ++|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~-----g~~vv~~d~~~~~~l~~al~-------g~d   66 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQAL-----GAEVVEADYDDPESLVAALK-------GVD   66 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHT-----TTEEEES-TT-HHHHHHHHT-------TCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhcc-----cceEeecccCCHHHHHHHHc-------CCc
Confidence            689999999999999999999999999999873  2233334332     35778999999999999988       899


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC--C--CccchhhH
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV--T--SHAYTSSK  171 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~--~~~y~~sK  171 (214)
                      .+|++.+...+        ..  ....        ..+.+++    ++.+-.++|. ||........  .  ....-..|
T Consensus        67 ~v~~~~~~~~~--------~~--~~~~--------~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k  123 (233)
T PF05368_consen   67 AVFSVTPPSHP--------SE--LEQQ--------KNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQK  123 (233)
T ss_dssp             EEEEESSCSCC--------CH--HHHH--------HHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHH
T ss_pred             eEEeecCcchh--------hh--hhhh--------hhHHHhh----hccccceEEE-EEecccccccccccccchhhhhh
Confidence            99999886421        11  1111        1222222    3334456764 5544443221  1  11233456


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +.++.+.+.       .+++...|.||+......
T Consensus       124 ~~ie~~l~~-------~~i~~t~i~~g~f~e~~~  150 (233)
T PF05368_consen  124 AEIEEYLRE-------SGIPYTIIRPGFFMENLL  150 (233)
T ss_dssp             HHHHHHHHH-------CTSEBEEEEE-EEHHHHH
T ss_pred             hhhhhhhhh-------ccccceeccccchhhhhh
Confidence            655544332       389999999998765443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12320 hypothetical protein; Provisional

Probab=98.93  E-value=1.3e-08  Score=90.39  Aligned_cols=135  Identities=15%  Similarity=0.119  Sum_probs=89.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|.||++++++|.++|++|++++|+...       ..  .   ..+.++.+|++|+. +.++++       ++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~~--~---~~ve~v~~Dl~d~~-l~~al~-------~~   61 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------AL--D---PRVDYVCASLRNPV-LQELAG-------EA   61 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------cc--c---CCceEEEccCCCHH-HHHHhc-------CC
Confidence            59999999999999999999999999999886431       00  0   14678999999873 444433       68


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |++||+|+....        .      ..++|+.++.++.+++.    +.+. ++|++||..+.   +  ..|.    ..
T Consensus        62 D~VIHLAa~~~~--------~------~~~vNv~Gt~nLleAA~----~~Gv-RiV~~SS~~G~---~--~~~~----~a  113 (699)
T PRK12320         62 DAVIHLAPVDTS--------A------PGGVGITGLAHVANAAA----RAGA-RLLFVSQAAGR---P--ELYR----QA  113 (699)
T ss_pred             CEEEEcCccCcc--------c------hhhHHHHHHHHHHHHHH----HcCC-eEEEEECCCCC---C--cccc----HH
Confidence            999999986311        0      11468877777666553    3433 69999986432   1  1232    12


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +.+.    ..   .++++..+.|..+..+.
T Consensus       114 E~ll----~~---~~~p~~ILR~~nVYGp~  136 (699)
T PRK12320        114 ETLV----ST---GWAPSLVIRIAPPVGRQ  136 (699)
T ss_pred             HHHH----Hh---cCCCEEEEeCceecCCC
Confidence            2221    11   34677777887777663

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.93  E-value=1.1e-08  Score=77.87  Aligned_cols=85  Identities=21%  Similarity=0.410  Sum_probs=68.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++++++|+||+|++|+.+++.|+++|++|++++|+.++++.+.+.+....    ......+|..+.+++.+.++   
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~---   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF----GEGVGAVETSDDAARAAAIK---   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc----CCcEEEeeCCCHHHHHHHHh---
Confidence            36789999999999999999999999999999999999888777776664322    23456789999888877765   


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                          +.|++|++.+..
T Consensus        97 ----~~diVi~at~~g  108 (194)
T cd01078          97 ----GADVVFAAGAAG  108 (194)
T ss_pred             ----cCCEEEECCCCC
Confidence                679998876643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.88  E-value=3.3e-08  Score=77.30  Aligned_cols=158  Identities=22%  Similarity=0.226  Sum_probs=97.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      ++||||||-||++++.+|.+.|.+|+++.|+....+...-.         .+       ...+.+.+...      ..+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---------~v-------~~~~~~~~~~~------~~~D   58 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP---------NV-------TLWEGLADALT------LGID   58 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---------cc-------cccchhhhccc------CCCC
Confidence            58999999999999999999999999999987654221110         00       01111111111      1699


Q ss_pred             EEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccchhhHH--
Q 044923           96 IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYTSSKH--  172 (214)
Q Consensus        96 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y~~sK~--  172 (214)
                      +|||-||..-..    ...+.+.-+..++.-+    ..++.+.....+. .+..+..-.|+.++++......|-....  
T Consensus        59 avINLAG~~I~~----rrWt~~~K~~i~~SRi----~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g  130 (297)
T COG1090          59 AVINLAGEPIAE----RRWTEKQKEEIRQSRI----NTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG  130 (297)
T ss_pred             EEEECCCCcccc----ccCCHHHHHHHHHHHh----HHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCC
Confidence            999999975322    1234555555555444    5566666666543 2455666677778877666555533332  


Q ss_pred             --HHHHHHHHHHHH---HccCCcEEEEEeCCcccCc
Q 044923          173 --GVVGLMKNTAVE---LGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       173 --a~~~l~~~la~e---~~~~gi~v~~v~Pg~v~t~  203 (214)
                        .+..+++.|=.+   ....|+||..+.-|.|-++
T Consensus       131 ~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~  166 (297)
T COG1090         131 DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP  166 (297)
T ss_pred             CChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence              344445444333   2345899999998888663

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.78  E-value=4e-08  Score=82.04  Aligned_cols=80  Identities=28%  Similarity=0.334  Sum_probs=61.8

Q ss_pred             ccCCcEEEEecC---------------CCh-HHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEee
Q 044923           10 RLQGKVALITGG---------------AGS-IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD   73 (214)
Q Consensus        10 ~~~~k~~lItGa---------------s~g-IG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D   73 (214)
                      +++||++|||||               |+| +|.++|++|..+|++|+++.++....          .+    .....+|
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~----~~~~~~~  247 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TP----PGVKSIK  247 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CC----CCcEEEE
Confidence            589999999999               667 99999999999999999887654321          01    1235689


Q ss_pred             CCCHHHH-HHHHHHHHHHcCCccEEEeCCcccCC
Q 044923           74 VTKEKDI-ENAVNTAVSQYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        74 ~~~~~~~-~~~~~~~~~~~g~id~li~~ag~~~~  106 (214)
                      +++.+++ +.++++   .++++|++|+|||+...
T Consensus       248 v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       248 VSTAEEMLEAALNE---LAKDFDIFISAAAVADF  278 (390)
T ss_pred             eccHHHHHHHHHHh---hcccCCEEEEccccccc
Confidence            9998888 555544   34689999999999754

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.76  E-value=5.5e-08  Score=75.78  Aligned_cols=99  Identities=16%  Similarity=0.209  Sum_probs=66.7

Q ss_pred             cEEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGS-IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~g-IG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .+-.||+.|+| ||+++|++|+++|++|+++.|+.....        ..  ...+.++.++     +..+..+.+.+.++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------~~--~~~v~~i~v~-----s~~~m~~~l~~~~~   80 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------EP--HPNLSIIEIE-----NVDDLLETLEPLVK   80 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------CC--CCCeEEEEEe-----cHHHHHHHHHHHhc
Confidence            46778876665 999999999999999999887542110        00  0134455532     23333444444556


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG  129 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~  129 (214)
                      ++|++|||||+....  +....+.++|..++++|.+.
T Consensus        81 ~~DivIh~AAvsd~~--~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         81 DHDVLIHSMAVSDYT--PVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CCCEEEeCCccCCce--ehhhhhhhhhhhhhhhhhhh
Confidence            899999999987432  34566788899999998643

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.70  E-value=1.6e-07  Score=73.79  Aligned_cols=137  Identities=21%  Similarity=0.303  Sum_probs=97.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++|-++-|-||||.+|+-++..|++.|.+|++-.|..+.--   ..+.- .+.-..+.+..-|+.|+++++++++    
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkv-mGdLGQvl~~~fd~~DedSIr~vvk----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKV-MGDLGQVLFMKFDLRDEDSIRAVVK----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheee-cccccceeeeccCCCCHHHHHHHHH----
Confidence            467889999999999999999999999999999999664321   22211 1222357889999999999999998    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                         .-++|||..|.-.+.+    +.+      .-++|+    +..+.+....++.+--++|.+|+..+...  ..+-|--
T Consensus       130 ---~sNVVINLIGrd~eTk----nf~------f~Dvn~----~~aerlAricke~GVerfIhvS~Lganv~--s~Sr~Lr  190 (391)
T KOG2865|consen  130 ---HSNVVINLIGRDYETK----NFS------FEDVNV----HIAERLARICKEAGVERFIHVSCLGANVK--SPSRMLR  190 (391)
T ss_pred             ---hCcEEEEeeccccccC----Ccc------cccccc----hHHHHHHHHHHhhChhheeehhhcccccc--ChHHHHH
Confidence               5689999999753321    111      223454    55566666777777778999999886633  2233455


Q ss_pred             hHHH
Q 044923          170 SKHG  173 (214)
Q Consensus       170 sK~a  173 (214)
                      +|++
T Consensus       191 sK~~  194 (391)
T KOG2865|consen  191 SKAA  194 (391)
T ss_pred             hhhh
Confidence            5554

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.69  E-value=1.4e-06  Score=74.93  Aligned_cols=184  Identities=16%  Similarity=0.114  Sum_probs=116.1

Q ss_pred             ccCCcEEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA-GSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        10 ~~~~k~~lItGas-~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .+.+|++|||||+ +-||.+++..|++.|+.||++..+- +...+..+.+-..+.. ....-+++.+.+...+++.+++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            5788999999999 5799999999999999999986543 3334555555444332 33456778899999999999998


Q ss_pred             HHHHcC--------------CccEEEeCCcccCCCCCCCCCCCH--HHHHHHHhhhhhHHHHHHHHHHHhhccCC---CC
Q 044923           87 AVSQYG--------------KLDIMFNNAGIVDEAKPNILDNDQ--AEFERILSVNLVGAFLGTKHAARVMKPAG---RG  147 (214)
Q Consensus        87 ~~~~~g--------------~id~li~~ag~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g  147 (214)
                      |.++..              .+|.+|.-|.+....  .+.+...  |.-.+.+-.|+   .+++-.+.++-..++   +-
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G--~l~~agsraE~~~rilLw~V---~Rliggl~~~~s~r~v~~R~  547 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG--ELADAGSRAEFAMRILLWNV---LRLIGGLKKQGSSRGVDTRL  547 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccC--ccccCCchHHHHHHHHHHHH---HHHHHHhhhhccccCcccce
Confidence            865321              378888888864322  3333332  22233444444   333333333333332   33


Q ss_pred             eEEEecCCCcccC-CCCCccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCccc
Q 044923          148 SIISTASVCGVIG-GVTSHAYTSSKHGVVGLMKNTAVEL--GRFGIRVNCVSPYAVS  201 (214)
Q Consensus       148 ~iv~~sS~~~~~~-~~~~~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~Pg~v~  201 (214)
                      ++|.-.|  ...+ +.+..+|+.+|++++.++.-+..|-  +. -+.+..-.-||++
T Consensus       548 hVVLPgS--PNrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtr  601 (866)
T COG4982         548 HVVLPGS--PNRGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTR  601 (866)
T ss_pred             EEEecCC--CCCCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeec
Confidence            4555444  2222 3456799999999999887776663  21 2444444556665

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.63  E-value=8.1e-07  Score=70.62  Aligned_cols=134  Identities=18%  Similarity=0.250  Sum_probs=91.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +.+|||||||.+|.+++++|.++|++|.+..|+.+......          ..+.....|+.++.++...++       +
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----------~~v~~~~~d~~~~~~l~~a~~-------G   63 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVLGDLRDPKSLVAGAK-------G   63 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----------CCcEEEEeccCCHhHHHHHhc-------c
Confidence            36899999999999999999999999999999987665544          157889999999999998888       7


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|.+++..+... ...     ..      ............+...     .+..+++.+|+.....  .....|..+|..
T Consensus        64 ~~~~~~i~~~~~-~~~-----~~------~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~  124 (275)
T COG0702          64 VDGVLLISGLLD-GSD-----AF------RAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAA  124 (275)
T ss_pred             ccEEEEEecccc-ccc-----ch------hHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHH
Confidence            889888888653 210     01      1111111122222221     2234577777766553  344578888887


Q ss_pred             HHHHHHHHHH
Q 044923          174 VVGLMKNTAV  183 (214)
Q Consensus       174 ~~~l~~~la~  183 (214)
                      .+...+....
T Consensus       125 ~e~~l~~sg~  134 (275)
T COG0702         125 VEAALRSSGI  134 (275)
T ss_pred             HHHHHHhcCC
Confidence            7766555443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.59  E-value=2.5e-07  Score=76.64  Aligned_cols=77  Identities=21%  Similarity=0.353  Sum_probs=66.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +++||.|+ |+||+.+|..|+++| .+|.+.+|+.++.+++......      ++.+.++|+.|.+.+.++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------~v~~~~vD~~d~~al~~li~-------   67 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------KVEALQVDAADVDALVALIK-------   67 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------cceeEEecccChHHHHHHHh-------
Confidence            67899999 999999999999999 8899999998877666554322      68999999999999998888       


Q ss_pred             CccEEEeCCccc
Q 044923           93 KLDIMFNNAGIV  104 (214)
Q Consensus        93 ~id~li~~ag~~  104 (214)
                      +.|+|||++...
T Consensus        68 ~~d~VIn~~p~~   79 (389)
T COG1748          68 DFDLVINAAPPF   79 (389)
T ss_pred             cCCEEEEeCCch
Confidence            459999999864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.58  E-value=4.1e-06  Score=61.87  Aligned_cols=149  Identities=14%  Similarity=0.121  Sum_probs=105.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++-|+||||-+|..|+++..++|..|..+.|++.+....           ..+.+++.|+.|++++.+.+.       +.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----------~~~~i~q~Difd~~~~a~~l~-------g~   63 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----------QGVTILQKDIFDLTSLASDLA-------GH   63 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----------ccceeecccccChhhhHhhhc-------CC
Confidence            577899999999999999999999999999998765433           146788999999999877766       88


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC---------c
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS---------H  165 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---------~  165 (214)
                      |+||..-|...+.        .+..  +        ....+.+...++..+..|++.+..+++.+-.++.         .
T Consensus        64 DaVIsA~~~~~~~--------~~~~--~--------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~  125 (211)
T COG2910          64 DAVISAFGAGASD--------NDEL--H--------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPA  125 (211)
T ss_pred             ceEEEeccCCCCC--------hhHH--H--------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCch
Confidence            9999998875322        1111  1        1224556666777777889999998887633321         2


Q ss_pred             c-chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          166 A-YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       166 ~-y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      . |..+++..+ +.+.|..+   .++.-+-|+|.....|
T Consensus       126 ey~~~A~~~ae-~L~~Lr~~---~~l~WTfvSPaa~f~P  160 (211)
T COG2910         126 EYKPEALAQAE-FLDSLRAE---KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             hHHHHHHHHHH-HHHHHhhc---cCcceEEeCcHHhcCC
Confidence            3 344444333 45555554   4578888888877666

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.52  E-value=1.8e-06  Score=70.45  Aligned_cols=166  Identities=17%  Similarity=0.136  Sum_probs=101.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+.+++.|||+.|.||..++..|+.++  ..++++++.  .++....++.+...     .....+.+|+.+..+.++   
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~-----~~~v~~~td~~~~~~~l~---   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT-----PAKVTGYADGELWEKALR---   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc-----CceEEEecCCCchHHHhC---
Confidence            456789999999999999999999766  469999883  22222223332111     223456666554444444   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC------------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC------------  156 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~------------  156 (214)
                          +.|++|+++|....        +.+++...++.|+    ..++.+.+.|++.+..++|+++|--            
T Consensus        76 ----gaDvVVitaG~~~~--------~~~tR~dll~~N~----~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~  139 (321)
T PTZ00325         76 ----GADLVLICAGVPRK--------PGMTRDDLFNTNA----PIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETL  139 (321)
T ss_pred             ----CCCEEEECCCCCCC--------CCCCHHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhh
Confidence                78999999997421        1234677888887    4555566666666655677777622            


Q ss_pred             -cccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          157 -GVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       157 -~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                       -..+.|....|+.+-.--..|-..++..+   |+....|+ ++|..+...
T Consensus       140 ~~~sg~p~~~viG~g~LDs~R~r~~la~~l---~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        140 KKAGVYDPRKLFGVTTLDVVRARKFVAEAL---GMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             hhccCCChhheeechhHHHHHHHHHHHHHh---CcChhheE-EEEEeecCC
Confidence             12234566678887434444666666665   45555555 444444433

>PLN00106 malate dehydrogenase

Probab=98.51  E-value=2.3e-06  Score=69.87  Aligned_cols=149  Identities=15%  Similarity=0.149  Sum_probs=95.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..+++.|||++|.||..++..|+.++.  .+++++.++  .+....++.+...     .....++++.+++.+.++    
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~-----~~~i~~~~~~~d~~~~l~----   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINT-----PAQVRGFLGDDQLGDALK----   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCc-----CceEEEEeCCCCHHHHcC----
Confidence            347899999999999999999998774  599998876  2222223322211     112235444444444444    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCCc----c------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCG----V------  158 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~----~------  158 (214)
                         +.|++|+.||....        +.+.+...++.|+..    ++.+.+.+.+.+. +.++++|...-    .      
T Consensus        86 ---~aDiVVitAG~~~~--------~g~~R~dll~~N~~i----~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~  150 (323)
T PLN00106         86 ---GADLVIIPAGVPRK--------PGMTRDDLFNINAGI----VKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLK  150 (323)
T ss_pred             ---CCCEEEEeCCCCCC--------CCCCHHHHHHHHHHH----HHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHH
Confidence               89999999997532        123467788888744    4555555555543 44455555442    1      


Q ss_pred             --cCCCCCccchhhHHHHHHHHHHHHHHHc
Q 044923          159 --IGGVTSHAYTSSKHGVVGLMKNTAVELG  186 (214)
Q Consensus       159 --~~~~~~~~y~~sK~a~~~l~~~la~e~~  186 (214)
                        .+.|....|+.++.....|...++.++.
T Consensus       151 ~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        151 KAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence              2355667899998777788888888863

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=2.6e-06  Score=65.01  Aligned_cols=149  Identities=19%  Similarity=0.184  Sum_probs=97.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCe---EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAK---VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~---vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++++|||++|=+|++|.+.+.++|..   .++.+.                        -.+|+++.++++++|...   
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------kd~DLt~~a~t~~lF~~e---   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------KDADLTNLADTRALFESE---   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------ccccccchHHHHHHHhcc---
Confidence            68999999999999999999988762   333222                        137999999999999876   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  159 (214)
                        +.-.||+.|+..+.... -...+.+-|...+++|-    .+++.+..+-    ...+|+..|.+.+.           
T Consensus        55 --kPthVIhlAAmVGGlf~-N~~ynldF~r~Nl~ind----NVlhsa~e~g----v~K~vsclStCIfPdkt~yPIdEtm  123 (315)
T KOG1431|consen   55 --KPTHVIHLAAMVGGLFH-NNTYNLDFIRKNLQIND----NVLHSAHEHG----VKKVVSCLSTCIFPDKTSYPIDETM  123 (315)
T ss_pred             --CCceeeehHhhhcchhh-cCCCchHHHhhcceech----hHHHHHHHhc----hhhhhhhcceeecCCCCCCCCCHHH
Confidence              67788999887754321 12334555666666654    4444444432    23366666655442           


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          160 -----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       160 -----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                           +-|..-.|+-+|..+.-..+.++.+++.   ...++.|-.+..|
T Consensus       124 vh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGp  169 (315)
T KOG1431|consen  124 VHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGP  169 (315)
T ss_pred             hccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCC
Confidence                 1122346899998777777888888644   4445555544443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.47  E-value=1.2e-06  Score=62.70  Aligned_cols=78  Identities=22%  Similarity=0.331  Sum_probs=59.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+.+..       ..+..+++.+..   +...   
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~-------~~~~~~~~~~~~---~~~~---   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG-------VNIEAIPLEDLE---EALQ---   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG-------CSEEEEEGGGHC---HHHH---
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc-------cccceeeHHHHH---HHHh---
Confidence            689999999998 99999999999999988 99999999988888887721       122334444333   3333   


Q ss_pred             HHcCCccEEEeCCcccC
Q 044923           89 SQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~  105 (214)
                          ..|++|++.+...
T Consensus        75 ----~~DivI~aT~~~~   87 (135)
T PF01488_consen   75 ----EADIVINATPSGM   87 (135)
T ss_dssp             ----TESEEEE-SSTTS
T ss_pred             ----hCCeEEEecCCCC
Confidence                7899999988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.47  E-value=2.7e-06  Score=72.85  Aligned_cols=77  Identities=26%  Similarity=0.412  Sum_probs=57.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|+|+++ +|.++|+.|+++|++|.+.+++. +..++..+++...     .+.++..|..+            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~------------   63 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL-----GIELVLGEYPE------------   63 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCEEEeCCcch------------
Confidence            57899999999888 99999999999999999998875 3333333333321     35677778775            


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                      +..+.+|+||+++|..
T Consensus        64 ~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             hHhhcCCEEEECCCCC
Confidence            1234789999999963

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.41  E-value=1.1e-06  Score=73.79  Aligned_cols=76  Identities=26%  Similarity=0.487  Sum_probs=59.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+|.|+ |.+|+.+++.|++.+-  +|++.+|+.++++.+.+.+.     ..++...++|+.|.+++.++++       +
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~l~~~~~-------~   67 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL-----GDRVEAVQVDVNDPESLAELLR-------G   67 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T-----TTTEEEEE--TTTHHHHHHHHT-------T
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc-----ccceeEEEEecCCHHHHHHHHh-------c
Confidence            689999 9999999999999974  79999999988877776551     1368999999999999988887       6


Q ss_pred             ccEEEeCCccc
Q 044923           94 LDIMFNNAGIV  104 (214)
Q Consensus        94 id~li~~ag~~  104 (214)
                      .|++||++|..
T Consensus        68 ~dvVin~~gp~   78 (386)
T PF03435_consen   68 CDVVINCAGPF   78 (386)
T ss_dssp             SSEEEE-SSGG
T ss_pred             CCEEEECCccc
Confidence            69999999965

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=98.39  E-value=1e-06  Score=68.56  Aligned_cols=36  Identities=36%  Similarity=0.522  Sum_probs=32.4

Q ss_pred             cCCcEEEEecCC----------------ChHHHHHHHHHHHcCCeEEEEecC
Q 044923           11 LQGKVALITGGA----------------GSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        11 ~~~k~~lItGas----------------~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      ++||++|||+|.                |.+|.++|++|.++|+.|+++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            479999999886                999999999999999999988764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.33  E-value=1e-05  Score=67.42  Aligned_cols=172  Identities=17%  Similarity=0.163  Sum_probs=99.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~   89 (214)
                      .+-.+|+|+||||++|+-+++.|.++|+.|..+.|+.+..++........ .   ....+..|.... +....++..+- 
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d-~---~~~~v~~~~~~~~d~~~~~~~~~~-  151 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVD-L---GLQNVEADVVTAIDILKKLVEAVP-  151 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccc-c---ccceeeeccccccchhhhhhhhcc-
Confidence            45588999999999999999999999999999999987776665511100 0   112222333332 22233332210 


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                        -...+++.++|..+..    +     +..--.++.+.|...+.+++    +..+-.++|+++|+...........+..
T Consensus       152 --~~~~~v~~~~ggrp~~----e-----d~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~  216 (411)
T KOG1203|consen  152 --KGVVIVIKGAGGRPEE----E-----DIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL  216 (411)
T ss_pred             --ccceeEEecccCCCCc----c-----cCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh
Confidence              1345677777654321    1     11112233344444555554    4445567999999888876554443332


Q ss_pred             hHHHHHH-HHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          170 SKHGVVG-LMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       170 sK~a~~~-l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                        ..... .=+....++...|+.-..|.||....+.
T Consensus       217 --~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  217 --NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             --hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence              11111 1122333445678999999999887543

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.20  E-value=7.8e-06  Score=67.01  Aligned_cols=75  Identities=17%  Similarity=0.323  Sum_probs=54.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHc-C-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKH-G-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~-g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .++++|+++||||+|.||+.+++.|+++ | .+++++.|+.+++..+.+++..            .|+.   ++.+    
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~------------~~i~---~l~~----  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG------------GKIL---SLEE----  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc------------ccHH---hHHH----
Confidence            3689999999999999999999999865 5 4788999987766665544321            1222   2222    


Q ss_pred             HHHHcCCccEEEeCCcccC
Q 044923           87 AVSQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~  105 (214)
                         .+...|++|+.++...
T Consensus       212 ---~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        212 ---ALPEADIVVWVASMPK  227 (340)
T ss_pred             ---HHccCCEEEECCcCCc
Confidence               2347899999999754

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.19  E-value=8e-06  Score=66.98  Aligned_cols=115  Identities=17%  Similarity=0.203  Sum_probs=69.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-------CeEEEEecCCc--chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHG-------AKVLIADIKDD--LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g-------~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      +++||||+|.||.+++..|+..+       ..|++.++++.  .++....++.+..      .....|++...+..+.+ 
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~------~~~~~~~~~~~~~~~~l-   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA------FPLLKSVVATTDPEEAF-   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc------ccccCCceecCCHHHHh-
Confidence            58999999999999999999854       47999998653  1222111111100      01112333333333333 


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTAS  154 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS  154 (214)
                            .+.|+||+.||.....     ..+.   .+.++.|+    .+.+.+.+.+.+..  .+.++.+|.
T Consensus        77 ------~~aDiVI~tAG~~~~~-----~~~R---~~l~~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          77 ------KDVDVAILVGAMPRKE-----GMER---KDLLKANV----KIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             ------CCCCEEEEeCCcCCCC-----CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEecC
Confidence                  3799999999985321     2233   55666776    66667767776662  566666665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.16  E-value=4.7e-06  Score=64.40  Aligned_cols=175  Identities=19%  Similarity=0.102  Sum_probs=107.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhcc-CC-CCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISSS-SS-SANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~-~~-~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      -..|++||||-||-=|.-+|+.|+.+|+.|--+-|+...-. ...+.+-.. .. ..........|+||...+.++++.+
T Consensus        26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            34579999999999999999999999999886655433222 222222211 11 1123455678999999999999988


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecC--CCcc-------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTAS--VCGV-------  158 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS--~~~~-------  158 (214)
                           +.+-+.|.|+...      ...+.+-.+-+-++...|+..+..+....-...+ -++--.|+  ..+.       
T Consensus       106 -----kPtEiYnLaAQSH------VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  106 -----KPTEVYNLAAQSH------VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTSELYGKVQEIPQS  173 (376)
T ss_pred             -----Cchhhhhhhhhcc------eEEEeecccceeeccchhhhhHHHHHHhcCcccc-eeEEecccHhhcccccCCCcc
Confidence                 6777888887643      2233333455667778888888777655433332 22322222  2221       


Q ss_pred             --cCCCCCccchhhHHHHHHHHHHHHHHH---ccCCcEEEEEeC
Q 044923          159 --IGGVTSHAYTSSKHGVVGLMKNTAVEL---GRFGIRVNCVSP  197 (214)
Q Consensus       159 --~~~~~~~~y~~sK~a~~~l~~~la~e~---~~~gi~v~~v~P  197 (214)
                        -|+...++|+++|.+.--++-.++..|   +-.||-+|.-.|
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence              134456799999976443333333322   334566665555

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.12  E-value=9.2e-06  Score=65.82  Aligned_cols=84  Identities=14%  Similarity=0.241  Sum_probs=70.4

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCeEEEEecCCcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSK----HGAKVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~----~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -++|-||||.-|.-+++++..    .+.++-+.+|+++++++..+......+. -....++.||.+|++++.+.++    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            489999999999999999998    7888999999999999988888766532 1122378899999999999998    


Q ss_pred             HcCCccEEEeCCcccC
Q 044923           90 QYGKLDIMFNNAGIVD  105 (214)
Q Consensus        90 ~~g~id~li~~ag~~~  105 (214)
                         ...+++||+|.+.
T Consensus        83 ---~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 ---QARVIVNCVGPYR   95 (423)
T ss_pred             ---hhEEEEeccccce
Confidence               4569999999874

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.09  E-value=4.7e-05  Score=56.08  Aligned_cols=159  Identities=14%  Similarity=0.107  Sum_probs=97.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++.++|.||||-.|..+.+++.+.+  .+|+++.|++..-+++.          .++.....|.+..++...-+   
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~----------k~v~q~~vDf~Kl~~~a~~~---   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD----------KVVAQVEVDFSKLSQLATNE---   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc----------ceeeeEEechHHHHHHHhhh---
Confidence            4678999999999999999999999987  35888888742211111          13444556766555444333   


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                          ..+|+++++-|..... .....        .+.+.-    .....+....++.+-..++.+||.++....  ...|
T Consensus        82 ----qg~dV~FcaLgTTRgk-aGadg--------fykvDh----Dyvl~~A~~AKe~Gck~fvLvSS~GAd~sS--rFlY  142 (238)
T KOG4039|consen   82 ----QGPDVLFCALGTTRGK-AGADG--------FYKVDH----DYVLQLAQAAKEKGCKTFVLVSSAGADPSS--RFLY  142 (238)
T ss_pred             ----cCCceEEEeecccccc-cccCc--------eEeech----HHHHHHHHHHHhCCCeEEEEEeccCCCccc--ceee
Confidence                3899999999887432 11111        111110    001112233355666789999998766433  3467


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      --.|.-++.=...|--+      ++..+.||++.-+...
T Consensus       143 ~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  143 MKMKGEVERDVIELDFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             eeccchhhhhhhhcccc------EEEEecCcceeccccc
Confidence            77787666433333221      6677899998765543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.06  E-value=9.1e-05  Score=59.87  Aligned_cols=140  Identities=19%  Similarity=0.231  Sum_probs=83.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+|++++|+|+++++|.++++.+...|++|+++.++.+..+.+. .+    +    +. ...|..+.+..+.+.+.. + 
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g----~~-~~~~~~~~~~~~~~~~~~-~-  210 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA----G----AD-AVFNYRAEDLADRILAAT-A-  210 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----C----CC-EEEeCCCcCHHHHHHHHc-C-
Confidence            36899999999999999999999999999999988775544432 11    1    11 124555544444433222 1 


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc------------c
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG------------V  158 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~------------~  158 (214)
                      ...+|.+++++|...             ...               ....+..  .|+++.+++...            .
T Consensus       211 ~~~~d~vi~~~~~~~-------------~~~---------------~~~~l~~--~g~~v~~~~~~~~~~~~~~~~~~~~  260 (325)
T cd08253         211 GQGVDVIIEVLANVN-------------LAK---------------DLDVLAP--GGRIVVYGSGGLRGTIPINPLMAKE  260 (325)
T ss_pred             CCceEEEEECCchHH-------------HHH---------------HHHhhCC--CCEEEEEeecCCcCCCChhHHHhcC
Confidence            136999999987310             011               1122222  467887765321            0


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEE
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV  192 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v  192 (214)
                      ...+....|...|.....+.+.+...+....++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (325)
T cd08253         261 ASIRGVLLYTATPEERAAAAEAIAAGLADGALRP  294 (325)
T ss_pred             ceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence            1112223466777777777777766665544543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.02  E-value=0.00023  Score=71.91  Aligned_cols=178  Identities=17%  Similarity=0.136  Sum_probs=114.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +.++.++|++.+++++.+++..|.++|+.|+++...+.    ..+.....   ...+..+...-.|..++..+++.+...
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPL---ASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----cccccccc---ccccccccccccchHHHHHHHHhhhcc
Confidence            45788999988999999999999999999887643221    11110000   011223344445567788888888887


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc---
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY---  167 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y---  167 (214)
                      .+.++.+||..+..............   ...-...+...|.+.|.+.+.+...+++.++.++...|..++......   
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~---~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~ 1902 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIEL---PEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGT 1902 (2582)
T ss_pred             ccccceEEEecccccccccccccccc---chhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccc
Confidence            88999999987754321000001100   111112233356777777666666667889999998887766433221   


Q ss_pred             -----hhhHHHHHHHHHHHHHHHccCCcEEEEEeCC
Q 044923          168 -----TSSKHGVVGLMKNTAVELGRFGIRVNCVSPY  198 (214)
Q Consensus       168 -----~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg  198 (214)
                           ....+++.+|+|+++.|+....+|...+.|.
T Consensus      1903 ~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1903 QQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence                 2357899999999999998767777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.96  E-value=7.4e-05  Score=61.21  Aligned_cols=148  Identities=10%  Similarity=0.057  Sum_probs=95.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCCcc--hhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-------KVLIADIKDDL--GESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~~~--~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~   83 (214)
                      +++.|+|++|.+|..+|..|+..|.       .+++.+.+++.  ++....++.+.... ...+.+   .-.+.+     
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~~-----   74 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPNV-----   74 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcHH-----
Confidence            5789999999999999999998874       68898885433  44444444433211 011111   111222     


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcc---
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGV---  158 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~---  158 (214)
                            .+.+-|++|..||....     ...+.   .+.++.|+    .+.+.+.+.+.+..  .+.++++|...-.   
T Consensus        75 ------~~~daDivvitaG~~~k-----~g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~  136 (322)
T cd01338          75 ------AFKDADWALLVGAKPRG-----PGMER---ADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNAL  136 (322)
T ss_pred             ------HhCCCCEEEEeCCCCCC-----CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH
Confidence                  22378999999997422     12333   44567776    66677777776654  5667777652211   


Q ss_pred             -----cC-CCCCccchhhHHHHHHHHHHHHHHHcc
Q 044923          159 -----IG-GVTSHAYTSSKHGVVGLMKNTAVELGR  187 (214)
Q Consensus       159 -----~~-~~~~~~y~~sK~a~~~l~~~la~e~~~  187 (214)
                           .+ .|....|+.++..-..|...++..++-
T Consensus       137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence                 12 566678999999999999999988643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.96  E-value=4.5e-05  Score=61.27  Aligned_cols=48  Identities=23%  Similarity=0.319  Sum_probs=42.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDIS   58 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~   58 (214)
                      ++++|+++|+|+ ||+|++++..|++.| .+|.++.|+.++.+++.+.+.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 899999999999999 679999999888877776654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.94  E-value=5.1e-05  Score=55.28  Aligned_cols=76  Identities=20%  Similarity=0.356  Sum_probs=55.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++++++|+|+ |++|.++++.|++.| ..|.+.+|+.++.++..+.+....        +..+.++.++.        
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG--------IAIAYLDLEEL--------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc--------cceeecchhhc--------
Confidence            467899999998 899999999999996 679999998877766665543210        12334443322        


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                        ....|++|++.+..
T Consensus        79 --~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 --LAEADLIINTTPVG   92 (155)
T ss_pred             --cccCCEEEeCcCCC
Confidence              24789999999864

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.91  E-value=0.00025  Score=60.77  Aligned_cols=78  Identities=27%  Similarity=0.371  Sum_probs=52.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+++|||+++ +|.++|+.|+++|++|++.+++........+.+...     .+.+...+  +...+   .+    
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-----g~~~~~~~--~~~~~---~~----   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-----GIKVICGS--HPLEL---LD----   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-----CCEEEeCC--CCHHH---hc----
Confidence            46899999999986 999999999999999999987654433333334332     12222221  11111   11    


Q ss_pred             HcCCccEEEeCCccc
Q 044923           90 QYGKLDIMFNNAGIV  104 (214)
Q Consensus        90 ~~g~id~li~~ag~~  104 (214)
                        ..+|++|+++|+.
T Consensus        67 --~~~d~vV~s~gi~   79 (447)
T PRK02472         67 --EDFDLMVKNPGIP   79 (447)
T ss_pred             --CcCCEEEECCCCC
Confidence              1489999999975

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.85  E-value=0.00016  Score=54.41  Aligned_cols=79  Identities=24%  Similarity=0.318  Sum_probs=47.5

Q ss_pred             cCCcEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeC
Q 044923           11 LQGKVALITGG----------------AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV   74 (214)
Q Consensus        11 ~~~k~~lItGa----------------s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~   74 (214)
                      ++||++|||+|                ||-.|.++|+++..+|+.|.++..... ...         +  ..+  ...++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p--~~~--~~i~v   66 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------P--PGV--KVIRV   66 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------TTE--EEEE-
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------c--ccc--eEEEe
Confidence            57899999976                578999999999999999998876632 100         0  122  33455


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEeCCcccCC
Q 044923           75 TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        75 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  106 (214)
                      ...+++.+   .+.+.+..-|++|++|++...
T Consensus        67 ~sa~em~~---~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   67 ESAEEMLE---AVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             SSHHHHHH---HHHHHGGGGSEEEE-SB--SE
T ss_pred             cchhhhhh---hhccccCcceeEEEecchhhe
Confidence            55555544   444445556999999998753

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.83  E-value=0.00015  Score=59.51  Aligned_cols=113  Identities=15%  Similarity=0.167  Sum_probs=70.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHH--HHH-
Q 044923           15 VALITGGAGSIGECAARLFSKHGA-------KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIE--NAV-   84 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~--~~~-   84 (214)
                      ++.|+|++|.+|..++..|+..+.       .+++.+++++..               +......|+.|.....  ... 
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------------~a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------------VLEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------------ccceeEeehhcccchhcCceec
Confidence            378999999999999999998653       488888865321               0122334444433100  000 


Q ss_pred             -HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCCeEEEecC
Q 044923           85 -NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA--GRGSIISTAS  154 (214)
Q Consensus        85 -~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~~sS  154 (214)
                       ....+.+.+.|++|+.||....        +.+++.+.++.|+    .+.+.+.+.+.+.  ..+.++.+|.
T Consensus        66 ~~~~~~~~~~aDiVVitAG~~~~--------~~~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        66 THDPAVAFTDVDVAILVGAFPRK--------EGMERRDLLSKNV----KIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             cCChHHHhCCCCEEEEcCCCCCC--------CCCcHHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence             0112344589999999997422        1234677888887    6677777777765  3466666664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd00704 MDH Malate dehydrogenase

Probab=97.81  E-value=0.00023  Score=58.41  Aligned_cols=115  Identities=16%  Similarity=0.154  Sum_probs=69.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA-------KVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++.||||+|.+|..++..|+..+.       .+++.++++  +.++....++.+.......    .+.++         .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~----~~~i~---------~   68 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLK----GVVIT---------T   68 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccC----CcEEe---------c
Confidence            589999999999999999998662       488888876  4333333333222100000    00111         1


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCCeEEEecC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA--GRGSIISTAS  154 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~~sS  154 (214)
                      ...+.+.+.|++|+.||....     ...+.   .+.++.|.    .+.+.+.+.+++.  ..+.++++|-
T Consensus        69 ~~~~~~~~aDiVVitAG~~~~-----~g~tR---~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          69 DPEEAFKDVDVAILVGAFPRK-----PGMER---ADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             ChHHHhCCCCEEEEeCCCCCC-----cCCcH---HHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            122334489999999997432     12233   45666675    6777777777776  3556666654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.79  E-value=8.7e-05  Score=59.35  Aligned_cols=75  Identities=17%  Similarity=0.257  Sum_probs=54.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .++|+++|+|+ ||+|++++..|++.|++|.+..|+.++.+++.+.+....    .+...  +.   ++.         .
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~----~~~~~--~~---~~~---------~  175 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG----EIQAF--SM---DEL---------P  175 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC----ceEEe--ch---hhh---------c
Confidence            56899999999 699999999999999999999999888777777664321    11111  11   110         1


Q ss_pred             cCCccEEEeCCccc
Q 044923           91 YGKLDIMFNNAGIV  104 (214)
Q Consensus        91 ~g~id~li~~ag~~  104 (214)
                      ....|++|++.+..
T Consensus       176 ~~~~DivInatp~g  189 (270)
T TIGR00507       176 LHRVDLIINATSAG  189 (270)
T ss_pred             ccCccEEEECCCCC
Confidence            23689999999874

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.73  E-value=4.9e-05  Score=58.04  Aligned_cols=48  Identities=27%  Similarity=0.411  Sum_probs=40.6

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+..+...+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            456899999999996 899999999999999999988887666555443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06849 hypothetical protein; Provisional

Probab=97.70  E-value=0.00043  Score=58.30  Aligned_cols=83  Identities=20%  Similarity=0.233  Sum_probs=55.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +.|+|||||++.++|.++++.|.+.|++|++++.+........+...       ....++..-.|++...+.+.++.++.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d-------~~~~~p~p~~d~~~~~~~L~~i~~~~   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD-------GFYTIPSPRWDPDAYIQALLSIVQRE   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh-------heEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999887543321111111       11222222334555555555555554


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                       ++|++|....
T Consensus        76 -~id~vIP~~e   85 (389)
T PRK06849         76 -NIDLLIPTCE   85 (389)
T ss_pred             -CCCEEEECCh
Confidence             5899998776

>PRK05086 malate dehydrogenase; Provisional

Probab=97.69  E-value=0.00036  Score=56.98  Aligned_cols=145  Identities=16%  Similarity=0.110  Sum_probs=75.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHH-cC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEe-eCCCHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSK-HG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC-DVTKEKDIENAVNTAVS   89 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~-~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+||+|+||.+++..|.. .+  ..+.+.++++. .+...-++.+.  .  ....+.. +-.|   +.+.+     
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~--~~~~i~~~~~~d---~~~~l-----   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--P--TAVKIKGFSGED---PTPAL-----   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--C--CCceEEEeCCCC---HHHHc-----
Confidence            4689999999999999998865 23  35777777643 22111122211  1  0111222 2222   22222     


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCC----cc------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVC----GV------  158 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~----~~------  158 (214)
                        ...|++|.++|.....     ..+   -...+..|.    ..++.+.+.|.+.+. +.++++|-..    ..      
T Consensus        68 --~~~DiVIitaG~~~~~-----~~~---R~dll~~N~----~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~  133 (312)
T PRK05086         68 --EGADVVLISAGVARKP-----GMD---RSDLFNVNA----GIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLK  133 (312)
T ss_pred             --CCCCEEEEcCCCCCCC-----CCC---HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHH
Confidence              3699999999975321     122   355566676    444555555555543 3444444433    11      


Q ss_pred             --cCCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          159 --IGGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       159 --~~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                        .+.|.....+.+..--..|.+.++..+
T Consensus       134 ~~sg~p~~rvig~~~Lds~R~~~~ia~~l  162 (312)
T PRK05086        134 KAGVYDKNKLFGVTTLDVIRSETFVAELK  162 (312)
T ss_pred             HhcCCCHHHEEeeecHHHHHHHHHHHHHh
Confidence              123333344554333345666666654

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.69  E-value=0.00066  Score=48.84  Aligned_cols=114  Identities=21%  Similarity=0.303  Sum_probs=72.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.|+|++|.+|.++|..|...+.  .+++.+++++.++....++....... .++.+..   .+.+.+           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            588999999999999999999974  49999999887777777776543211 1122222   333332           


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      .+.|++|..||....     ...+.   ...++.|.    .+.+.+.+.+.+.. .+.++.++.
T Consensus        68 ~~aDivvitag~~~~-----~g~sR---~~ll~~N~----~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRK-----PGMSR---LDLLEANA----KIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSS-----TTSSH---HHHHHHHH----HHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccccEEEEecccccc-----ccccH---HHHHHHhH----hHHHHHHHHHHHhCCccEEEEeCC
Confidence            278999999997532     12233   44556676    45555555555443 455665554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.67  E-value=0.0008  Score=54.86  Aligned_cols=80  Identities=19%  Similarity=0.297  Sum_probs=55.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ..+++++|+|+++++|.++++.+...|++++++.++++..+.+. ..    +    .. ...|..+.+....+.+.... 
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~----~----~~-~~~~~~~~~~~~~~~~~~~~-  233 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL----G----AD-YVIDYRKEDFVREVRELTGK-  233 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc----C----CC-eEEecCChHHHHHHHHHhCC-
Confidence            35789999999999999999999999999999888775544331 11    1    11 22466665555554433221 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                       +++|++++++|
T Consensus       234 -~~~d~~i~~~g  244 (342)
T cd08266         234 -RGVDVVVEHVG  244 (342)
T ss_pred             -CCCcEEEECCc
Confidence             36999999988

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.67  E-value=0.00012  Score=56.41  Aligned_cols=160  Identities=21%  Similarity=0.290  Sum_probs=99.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHc-CCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKH-GAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~-g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +-+...+||||+-|-+|.++|..|..+ |.+ |++.+-....     +...+      .--++-.|+-|..++++++-. 
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-----~~V~~------~GPyIy~DILD~K~L~eIVVn-  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-----ANVTD------VGPYIYLDILDQKSLEEIVVN-  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-----hhhcc------cCCchhhhhhccccHHHhhcc-
Confidence            445678999999999999999999865 655 6654321111     11111      123567899998888877532 


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-C-----
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-G-----  161 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-~-----  161 (214)
                          .++|-+||-.+..+..       .+....-..++|+.|.-.+.+.+..+-      --+|+-|.-|..+ .     
T Consensus       109 ----~RIdWL~HfSALLSAv-------GE~NVpLA~~VNI~GvHNil~vAa~~k------L~iFVPSTIGAFGPtSPRNP  171 (366)
T KOG2774|consen  109 ----KRIDWLVHFSALLSAV-------GETNVPLALQVNIRGVHNILQVAAKHK------LKVFVPSTIGAFGPTSPRNP  171 (366)
T ss_pred             ----cccceeeeHHHHHHHh-------cccCCceeeeecchhhhHHHHHHHHcC------eeEeecccccccCCCCCCCC
Confidence                2899999987766422       112233456788877666555443322      2345544444432 1     


Q ss_pred             -C------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEE-eCCccc
Q 044923          162 -V------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV-SPYAVS  201 (214)
Q Consensus       162 -~------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v-~Pg~v~  201 (214)
                       |      ....|+.||.-.+.+.+.+...+   |+..-++ .||.+.
T Consensus       172 TPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  172 TPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIIS  216 (366)
T ss_pred             CCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccc
Confidence             1      12489999999999999888764   5655544 366554

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.65  E-value=0.00095  Score=54.40  Aligned_cols=115  Identities=18%  Similarity=0.269  Sum_probs=73.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++.|.|+ |++|..+|..|+..|  ..+++++++++..+....++.+..... ..+.+. .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            36788886 899999999999999  469999999988888777775432111 111111 1  22221           


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASV  155 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~  155 (214)
                      ....|++|+++|....     ...+.   ...++.|.    .+.+...+.+++.. .+.++++|..
T Consensus        66 l~~aDIVIitag~~~~-----~g~~R---~dll~~N~----~i~~~~~~~i~~~~~~~~vivvsNP  119 (306)
T cd05291          66 CKDADIVVITAGAPQK-----PGETR---LDLLEKNA----KIMKSIVPKIKASGFDGIFLVASNP  119 (306)
T ss_pred             hCCCCEEEEccCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCh
Confidence            1378999999997432     12333   34555665    45555555555543 5666776653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.61  E-value=0.00025  Score=60.04  Aligned_cols=76  Identities=17%  Similarity=0.315  Sum_probs=54.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|.|+ ||+|+.+++.|+..|+ ++.++.|+.++.+.+.+.+..       ..     +...+++.+.     
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-------~~-----~~~~~~l~~~-----  239 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-------AS-----AHYLSELPQL-----  239 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-------Ce-----EecHHHHHHH-----
Confidence            578999999998 9999999999999996 589999998777666665421       11     1112222222     


Q ss_pred             HHcCCccEEEeCCcccC
Q 044923           89 SQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~  105 (214)
                        ....|++|++.+...
T Consensus       240 --l~~aDiVI~aT~a~~  254 (414)
T PRK13940        240 --IKKADIIIAAVNVLE  254 (414)
T ss_pred             --hccCCEEEECcCCCC
Confidence              336789999888654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.57  E-value=0.00012  Score=63.89  Aligned_cols=47  Identities=26%  Similarity=0.450  Sum_probs=40.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~   57 (214)
                      ++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            578899999999 59999999999999999999999877776665544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.57  E-value=0.00027  Score=56.97  Aligned_cols=50  Identities=14%  Similarity=0.290  Sum_probs=43.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhcc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSS   60 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~   60 (214)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+.+.+.+...
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~  174 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR  174 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence            467899999997 7799999999999998 5999999998888888777543

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.56  E-value=0.00041  Score=55.85  Aligned_cols=79  Identities=10%  Similarity=0.085  Sum_probs=54.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++.+.+....    .+  .  .+...+++..      
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~----~~--~--~~~~~~~~~~------  186 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG----VI--T--RLEGDSGGLA------  186 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC----cc--e--eccchhhhhh------
Confidence            367899999976 9999999999999997 59999999888887776654221    11  1  1111122211      


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                       .....|++||+.+..
T Consensus       187 -~~~~~DiVInaTp~g  201 (282)
T TIGR01809       187 -IEKAAEVLVSTVPAD  201 (282)
T ss_pred             -cccCCCEEEECCCCC
Confidence             123689999998864

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.56  E-value=0.00052  Score=55.25  Aligned_cols=49  Identities=18%  Similarity=0.402  Sum_probs=41.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISS   59 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~   59 (214)
                      +.++|+++|.|+ ||-+++++-.|++.|+. +.+..|+.++.+++.+.+..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            467899999998 89999999999999974 88999998888888777643

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.55  E-value=0.00038  Score=55.13  Aligned_cols=75  Identities=13%  Similarity=0.212  Sum_probs=53.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      .++|+|||+- |+.+++.|.++|++|+...+++...+...+.         ....+..+..|.+++.+++.+-     ++
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~---------g~~~v~~g~l~~~~l~~~l~~~-----~i   66 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH---------QALTVHTGALDPQELREFLKRH-----SI   66 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc---------CCceEEECCCCHHHHHHHHHhc-----CC
Confidence            6899999998 9999999999999999998887543332211         1223446666777766666532     68


Q ss_pred             cEEEeCCccc
Q 044923           95 DIMFNNAGIV  104 (214)
Q Consensus        95 d~li~~ag~~  104 (214)
                      |+||+.+-.+
T Consensus        67 ~~VIDAtHPf   76 (256)
T TIGR00715        67 DILVDATHPF   76 (256)
T ss_pred             CEEEEcCCHH
Confidence            8888876543

This enzyme was found to be a monomer by gel filtration.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.55  E-value=0.0013  Score=53.74  Aligned_cols=118  Identities=17%  Similarity=0.214  Sum_probs=76.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      -.++++.|+|+ |++|.++|..|+..|.  .+++.+++++.++....++.+......++.+. .  .+.+.         
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~---------   70 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD---------   70 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH---------
Confidence            35678999998 9999999999999986  59999999888877777776543211122222 1  22221         


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASV  155 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~  155 (214)
                        +...|++|..||....     ...+.   ...++.|.    ...+.+.+.+.+. ..+.+++++..
T Consensus        71 --~~~adivIitag~~~k-----~g~~R---~dll~~N~----~i~~~i~~~i~~~~~~~~vivvsNP  124 (315)
T PRK00066         71 --CKDADLVVITAGAPQK-----PGETR---LDLVEKNL----KIFKSIVGEVMASGFDGIFLVASNP  124 (315)
T ss_pred             --hCCCCEEEEecCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCc
Confidence              2378999999997432     12344   34466665    4555555555554 35667766653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.54  E-value=0.00072  Score=55.81  Aligned_cols=36  Identities=33%  Similarity=0.585  Sum_probs=31.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++|+.|++.|. ++.+++++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            578899999997 7899999999999997 68888775

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.48  E-value=0.00073  Score=55.58  Aligned_cols=77  Identities=22%  Similarity=0.363  Sum_probs=52.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc-
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY-   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-   91 (214)
                      |+++||+||+||+|....+.....|+.++++..+.++.+ ..+++-.      .   ...|..+.+    +.+++++.. 
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGA------d---~vi~y~~~~----~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGA------D---HVINYREED----FVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCC------C---EEEcCCccc----HHHHHHHHcC
Confidence            899999999999999999988889988777766665544 3333211      1   123344443    444454443 


Q ss_pred             C-CccEEEeCCcc
Q 044923           92 G-KLDIMFNNAGI  103 (214)
Q Consensus        92 g-~id~li~~ag~  103 (214)
                      | .+|+++...|.
T Consensus       209 g~gvDvv~D~vG~  221 (326)
T COG0604         209 GKGVDVVLDTVGG  221 (326)
T ss_pred             CCCceEEEECCCH
Confidence            2 59999999884

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.48  E-value=0.00038  Score=56.19  Aligned_cols=77  Identities=13%  Similarity=0.223  Sum_probs=61.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ...+|-||+|.-|.=+|++|+++|.+..+.+|+..++..+.+.+...      ...+  ++.+++.+++.++       +
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~------~~~~--p~~~p~~~~~~~~-------~   71 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE------AAVF--PLGVPAALEAMAS-------R   71 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc------cccc--CCCCHHHHHHHHh-------c
Confidence            55789999999999999999999999999999999988888777532      1223  3333666666666       7


Q ss_pred             ccEEEeCCcccC
Q 044923           94 LDIMFNNAGIVD  105 (214)
Q Consensus        94 id~li~~ag~~~  105 (214)
                      .++|+||+|.+.
T Consensus        72 ~~VVlncvGPyt   83 (382)
T COG3268          72 TQVVLNCVGPYT   83 (382)
T ss_pred             ceEEEecccccc
Confidence            799999999874

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.45  E-value=0.0011  Score=53.47  Aligned_cols=48  Identities=13%  Similarity=0.299  Sum_probs=38.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc---chhhHHHHhh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDD---LGESVCEDIS   58 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~---~~~~~~~~~~   58 (214)
                      ++++|+++|.|+ ||-+++++-.|+..|+ +|.+..|+.+   +.+++.+.+.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            468899999997 6669999999999997 5889999854   5556655553

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.45  E-value=0.00066  Score=55.86  Aligned_cols=81  Identities=19%  Similarity=0.363  Sum_probs=52.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+|++|..+++.+...|++|+.+.+++++.+.+.+.+..      . .+  .|..+.++..+.+.+... 
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa------~-~v--i~~~~~~~~~~~i~~~~~-  219 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF------D-DA--FNYKEEPDLDAALKRYFP-  219 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC------c-ee--EEcCCcccHHHHHHHhCC-
Confidence            3689999999999999999988888899999888877655444332211      1 11  232222233332322211 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                       +++|+++.+.|
T Consensus       220 -~gvd~v~d~~g  230 (338)
T cd08295         220 -NGIDIYFDNVG  230 (338)
T ss_pred             -CCcEEEEECCC
Confidence             47999998877

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.39  E-value=0.00039  Score=43.76  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=22.6

Q ss_pred             cCC-cEEEEecCCChHHHHHHHHHH-HcCCeEEEEec
Q 044923           11 LQG-KVALITGGAGSIGECAARLFS-KHGAKVLIADI   45 (214)
Q Consensus        11 ~~~-k~~lItGas~gIG~~ia~~L~-~~g~~vi~~~r   45 (214)
                      ++| |+|||+|+|+|.|++-.-.++ ..|++.+-+..
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~f   72 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSF   72 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE-
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEee
Confidence            456 899999999999999444444 66788776554

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.34  E-value=0.0018  Score=54.16  Aligned_cols=77  Identities=27%  Similarity=0.389  Sum_probs=54.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +.++.++|.|+ |.+|+..++.+...|++|++++|+.++.+.+.....         ..+..+..+++.+.+.+.     
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g---------~~v~~~~~~~~~l~~~l~-----  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG---------GRIHTRYSNAYEIEDAVK-----  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC---------ceeEeccCCHHHHHHHHc-----
Confidence            56678999987 789999999999999999999988766544433221         112234555555544443     


Q ss_pred             cCCccEEEeCCccc
Q 044923           91 YGKLDIMFNNAGIV  104 (214)
Q Consensus        91 ~g~id~li~~ag~~  104 (214)
                        ..|++|++++..
T Consensus       230 --~aDvVI~a~~~~  241 (370)
T TIGR00518       230 --RADLLIGAVLIP  241 (370)
T ss_pred             --cCCEEEEccccC
Confidence              679999998763

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.33  E-value=0.0018  Score=53.57  Aligned_cols=36  Identities=36%  Similarity=0.628  Sum_probs=32.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++.+++++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            577899999998 7999999999999998 68888875

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.33  E-value=0.0016  Score=53.88  Aligned_cols=82  Identities=20%  Similarity=0.284  Sum_probs=53.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .-+|+.+||.||+||+|.+..+.....|+..+++.++.+.. ++.+.+..         -...|..+++-++...+ .. 
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGA---------d~vvdy~~~~~~e~~kk-~~-  222 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGA---------DEVVDYKDENVVELIKK-YT-  222 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCC---------cEeecCCCHHHHHHHHh-hc-
Confidence            35689999999999999999998888895555555554443 23333321         12357777443333222 21 


Q ss_pred             HcCCccEEEeCCccc
Q 044923           90 QYGKLDIMFNNAGIV  104 (214)
Q Consensus        90 ~~g~id~li~~ag~~  104 (214)
                       .+++|+++.+.|-.
T Consensus       223 -~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  223 -GKGVDVVLDCVGGS  236 (347)
T ss_pred             -CCCccEEEECCCCC
Confidence             56899999999963

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.32  E-value=0.0011  Score=55.07  Aligned_cols=81  Identities=19%  Similarity=0.338  Sum_probs=51.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|.+++|.|++|++|..+++.....|++|+.+.+++++.+.+.+++..      . .  ..|..+.+++.+.+.+..  
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa------~-~--vi~~~~~~~~~~~i~~~~--  225 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF------D-E--AFNYKEEPDLDAALKRYF--  225 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC------C-E--EEECCCcccHHHHHHHHC--
Confidence            3589999999999999999988888899998888776654443322211      1 1  123322222333222221  


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      -+++|+++.+.|
T Consensus       226 ~~gvD~v~d~vG  237 (348)
T PLN03154        226 PEGIDIYFDNVG  237 (348)
T ss_pred             CCCcEEEEECCC
Confidence            136899998877

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.31  E-value=0.0011  Score=53.53  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=35.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      ++.||+++|+|. |++|+++|+.|...|++|.+..|+.+..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~  187 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL  187 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            678999999999 6699999999999999999999987543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.29  E-value=0.0022  Score=49.05  Aligned_cols=37  Identities=35%  Similarity=0.509  Sum_probs=31.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      ..+++++++|.| .||+|.++++.|++.|. ++.+++++
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            357889999998 57999999999999997 58888775

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.28  E-value=0.0075  Score=48.09  Aligned_cols=36  Identities=19%  Similarity=0.395  Sum_probs=29.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      .+++.+|+|.|+ ||+|.++|+.|++.|. ++.+++.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467888999876 5999999999999994 57787654

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.27  E-value=0.0012  Score=53.98  Aligned_cols=80  Identities=20%  Similarity=0.309  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|.+++|+|++|++|..+++.....|++|+.+.+++++.+... ++.   .   . .  ..|..+.+...+.++...  
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lG---a---~-~--vi~~~~~~~~~~~~~~~~--  204 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLG---F---D-V--AFNYKTVKSLEETLKKAS--  204 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC---C---C-E--EEeccccccHHHHHHHhC--
Confidence            35889999999999999999888888999998888766544432 221   1   1 1  123333223333333321  


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      -+++|+++.+.|
T Consensus       205 ~~gvdvv~d~~G  216 (325)
T TIGR02825       205 PDGYDCYFDNVG  216 (325)
T ss_pred             CCCeEEEEECCC
Confidence            136999999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.24  E-value=0.0014  Score=53.38  Aligned_cols=42  Identities=26%  Similarity=0.389  Sum_probs=35.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES   52 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~   52 (214)
                      ..+.+++|+|+++++|.++++.+...|.+|+++.++.+..+.
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            357899999999999999999999999999988887654433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.21  E-value=0.0077  Score=47.31  Aligned_cols=79  Identities=25%  Similarity=0.379  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .++++++|+|+++ +|.++++.+...|.+|+++.+++++.+.. +..   ..   . .  ..|..+.+....+.   ...
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~---~-~--~~~~~~~~~~~~~~---~~~  198 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GA---D-H--VIDYKEEDLEEELR---LTG  198 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CC---c-e--eccCCcCCHHHHHH---Hhc
Confidence            4688999999999 99999999988999999998876554333 221   11   1 1  12333333333332   223


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+.+|+++++++.
T Consensus       199 ~~~~d~vi~~~~~  211 (271)
T cd05188         199 GGGADVVIDAVGG  211 (271)
T ss_pred             CCCCCEEEECCCC
Confidence            3579999999873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.20  E-value=0.0086  Score=46.75  Aligned_cols=36  Identities=25%  Similarity=0.505  Sum_probs=29.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      .+++++++|.|. ||+|.++++.|++.|. ++.+++..
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467788999876 5999999999999997 47777654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.19  E-value=0.0015  Score=52.45  Aligned_cols=79  Identities=16%  Similarity=0.303  Sum_probs=56.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +.+|+.++|.|| ||-+++++..|++.|+ ++.+..|+.++.+++.+.+.....     .....+..+.+...       
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-----~~~~~~~~~~~~~~-------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-----AVEAAALADLEGLE-------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-----cccccccccccccc-------
Confidence            456899999986 6899999999999995 699999999999888888775432     11112222222111       


Q ss_pred             HHcCCccEEEeCCcccC
Q 044923           89 SQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~  105 (214)
                          ..|++||+.+..-
T Consensus       190 ----~~dliINaTp~Gm  202 (283)
T COG0169         190 ----EADLLINATPVGM  202 (283)
T ss_pred             ----ccCEEEECCCCCC
Confidence                4699999987753

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.18  E-value=0.0019  Score=53.14  Aligned_cols=78  Identities=15%  Similarity=0.301  Sum_probs=50.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |++++|+||+|++|..+++.....|+ +|+.+.+++++.+.+.+++..      . .+  .|..+. ++.+.+.++..  
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa------~-~v--i~~~~~-~~~~~i~~~~~--  222 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF------D-AA--INYKTD-NVAERLRELCP--  222 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC------c-EE--EECCCC-CHHHHHHHHCC--
Confidence            38999999999999999988878898 799888877655444433211      1 11  233222 22222322221  


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                      +++|+++.+.|
T Consensus       223 ~gvd~vid~~g  233 (345)
T cd08293         223 EGVDVYFDNVG  233 (345)
T ss_pred             CCceEEEECCC
Confidence            46999999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.18  E-value=0.0025  Score=51.29  Aligned_cols=81  Identities=22%  Similarity=0.332  Sum_probs=53.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .++++++|+|+++++|..+++.+...|++|+++.++.+..+.+ +.+    +    +. ...|..+.+....+.+.. . 
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~----g----~~-~~~~~~~~~~~~~~~~~~-~-  205 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL----G----AD-VAINYRTEDFAEEVKEAT-G-  205 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc----C----CC-EEEeCCchhHHHHHHHHh-C-
Confidence            4678999999999999999999999999999988876554443 222    1    11 123444333333332211 1 


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++++++|.
T Consensus       206 ~~~~d~vi~~~g~  218 (323)
T cd05276         206 GRGVDVILDMVGG  218 (323)
T ss_pred             CCCeEEEEECCch
Confidence            1369999999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.17  E-value=0.0099  Score=48.31  Aligned_cols=147  Identities=17%  Similarity=0.209  Sum_probs=84.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++.|+|+ |+||.++|..|+.++.  .+++.+.+++.++-...++.+.......-..+..| .+.+.           +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence            36889999 9999999999988874  59999998777766666665543211111122222 22222           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcc--------cCCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGV--------IGGV  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~--------~~~~  162 (214)
                      .+-|+++..||.....     .++.   .+.++.|.    ...+.+.+.+.+.. .+.++.++...=.        .+.|
T Consensus        68 ~~aDiVvitAG~prKp-----GmtR---~DLl~~Na----~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~~k~sg~p  135 (313)
T COG0039          68 KGADIVVITAGVPRKP-----GMTR---LDLLEKNA----KIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIAMKFSGFP  135 (313)
T ss_pred             cCCCEEEEeCCCCCCC-----CCCH---HHHHHhhH----HHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHHHHhcCCC
Confidence            2789999999975321     2344   45566676    44555555555554 3555555542211        1223


Q ss_pred             CCc-cchhhHHHHHHHHHHHHHHH
Q 044923          163 TSH-AYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       163 ~~~-~y~~sK~a~~~l~~~la~e~  185 (214)
                      ... .-..+..--..|-..++.++
T Consensus       136 ~~rvig~gt~LDsaR~~~~lae~~  159 (313)
T COG0039         136 KNRVIGSGTVLDSARFRTFLAEKL  159 (313)
T ss_pred             ccceecccchHHHHHHHHHHHHHh
Confidence            222 22333344455666666665

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.16  E-value=0.0012  Score=56.68  Aligned_cols=80  Identities=25%  Similarity=0.332  Sum_probs=55.8

Q ss_pred             CccCCcEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEe
Q 044923            9 PRLQGKVALITGG----------------AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC   72 (214)
Q Consensus         9 ~~~~~k~~lItGa----------------s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (214)
                      .+++||++|||+|                ||-.|.+||+++..+|++|.++.....        +.  .+  ..+.++. 
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~--~p--~~v~~i~-  318 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA--DP--QGVKVIH-  318 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC--CC--CCceEEE-
Confidence            3589999999976                477999999999999999998875432        11  11  1244443 


Q ss_pred             eCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCC
Q 044923           73 DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        73 D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  106 (214)
                       +.   +.++..+++.+.+. .|++|++|++...
T Consensus       319 -V~---ta~eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        319 -VE---SARQMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             -ec---CHHHHHHHHHhhCC-CCEEEEeccccce
Confidence             33   34555555555554 6999999998743

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.15  E-value=0.004  Score=45.66  Aligned_cols=95  Identities=20%  Similarity=0.216  Sum_probs=58.9

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhc-------cCCCCCCceEEEee
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISS-------SSSSANGCSYVHCD   73 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~-------~~~~~~~v~~~~~D   73 (214)
                      ||..+-+..+++||.++|.|| |-+|...++.|.+.|++|.+++.  +..+++.+ +..       .......-..+..=
T Consensus         1 ~~~~~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp--~~~~~l~~-l~~i~~~~~~~~~~dl~~a~lVia   76 (157)
T PRK06719          1 MYNMYPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP--EICKEMKE-LPYITWKQKTFSNDDIKDAHLIYA   76 (157)
T ss_pred             CCcccceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC--ccCHHHHh-ccCcEEEecccChhcCCCceEEEE
Confidence            676666666899999999997 56999999999999999888853  33333322 110       00000011123334


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCcc
Q 044923           74 VTKEKDIENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      .|+.+++...+.+..+..    .++|++.-
T Consensus        77 aT~d~e~N~~i~~~a~~~----~~vn~~d~  102 (157)
T PRK06719         77 ATNQHAVNMMVKQAAHDF----QWVNVVSD  102 (157)
T ss_pred             CCCCHHHHHHHHHHHHHC----CcEEECCC
Confidence            567777777776666542    35666653

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.14  E-value=0.012  Score=51.11  Aligned_cols=83  Identities=24%  Similarity=0.318  Sum_probs=56.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC-------------CH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT-------------KE   77 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~~   77 (214)
                      ..+.+++|.|+ |.+|...++.+...|+.|++.+++.++++.... +        ...++..|..             ..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l--------Ga~~v~v~~~e~g~~~~gYa~~~s~  231 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M--------GAEFLELDFKEEGGSGDGYAKVMSE  231 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--------CCeEEeccccccccccccceeecCH
Confidence            45689999996 899999999999999999999888765443332 2        1233333321             12


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      +..+...+...+...+.|++|+++-+
T Consensus       232 ~~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       232 EFIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECccc
Confidence            33444444455556789999999954

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.14  E-value=0.0021  Score=54.83  Aligned_cols=47  Identities=30%  Similarity=0.564  Sum_probs=39.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~   57 (214)
                      ++++++++|.|+ |.+|..+++.|...|+ +|++..|+.++.+.+.+.+
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478899999987 9999999999999997 6889999887766555543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.12  E-value=0.0035  Score=52.61  Aligned_cols=83  Identities=22%  Similarity=0.324  Sum_probs=52.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC-------------------CcchhhHHHHhhccCCCCCCceE
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK-------------------DDLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~-------------------~~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      .+++++|+|.|+ ||+|..+++.|+..|.. +.+++++                   ..+.+.+.+.+.+..+ ..++..
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~  209 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-DVQVEA  209 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-CCEEEE
Confidence            467888999965 79999999999999984 8888776                   2344444444544322 123344


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      +...+++ +.+.++++       +.|++|++..
T Consensus       210 ~~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        210 VQERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             EeccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            4434432 33333333       5788887766

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.11  E-value=0.0054  Score=48.35  Aligned_cols=36  Identities=22%  Similarity=0.480  Sum_probs=30.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++..
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467899999998 99999999999999974 7777553

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.11  E-value=0.0019  Score=55.44  Aligned_cols=39  Identities=21%  Similarity=0.299  Sum_probs=33.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      +++|.|+ |.+|+++++.|.++|.+|++++++++..+...
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~   40 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ   40 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            5788887 99999999999999999999999887665544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.10  E-value=0.00083  Score=45.60  Aligned_cols=90  Identities=23%  Similarity=0.367  Sum_probs=49.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC-CCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS-SSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++||.+||+|| |.+|..-++.|.+.|++|.+++...+..+...+...... ..-.... +..-.++...+.+.+.+..
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~-lV~~at~d~~~n~~i~~~a   81 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGAD-LVFAATDDPELNEAIYADA   81 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTES-EEEE-SS-HHHHHHHHHHH
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhhe-EEEecCCCHHHHHHHHHHH
Confidence            689999999999 899999999999999999999887411111111000000 0011223 3334454555555554444


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                      +.   ..+++|.+...
T Consensus        82 ~~---~~i~vn~~D~p   94 (103)
T PF13241_consen   82 RA---RGILVNVVDDP   94 (103)
T ss_dssp             HH---TTSEEEETT-C
T ss_pred             hh---CCEEEEECCCc
Confidence            43   34677777653

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.10  E-value=0.0027  Score=53.98  Aligned_cols=46  Identities=35%  Similarity=0.622  Sum_probs=38.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCED   56 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~   56 (214)
                      ++++++++|.|+ |.+|..+++.|...| .+|+++.|+.++.+.+.+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478899999997 999999999999999 6799999988766555544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.07  E-value=0.0053  Score=52.34  Aligned_cols=115  Identities=11%  Similarity=0.070  Sum_probs=76.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-------CC--eEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKH-------GA--KVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-------g~--~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~   83 (214)
                      -++.|+|++|.+|.++|-.|+..       +.  ++++++++++.++...-++.+..... ..+.+ ..  .+.+     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~ye-----  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPYE-----  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCHH-----
Confidence            45899999999999999999988       64  58999999999888877777643111 11111 11  2222     


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCCeEEEecC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP--AGRGSIISTAS  154 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~~sS  154 (214)
                            .+.+.|++|..||....     ..++.   .+.++.|.    .+++...+.+.+  ...+.+|.+|.
T Consensus       173 ------~~kdaDiVVitAG~prk-----pG~tR---~dLl~~N~----~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        173 ------VFQDAEWALLIGAKPRG-----PGMER---ADLLDING----QIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ------HhCcCCEEEECCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCC
Confidence                  23378999999997421     12333   45666776    566667777766  34566676665

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.07  E-value=0.0031  Score=50.54  Aligned_cols=80  Identities=16%  Similarity=0.286  Sum_probs=56.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|.+++|++|+|.+|.-..+.-.-+|++|+-+.-.+++..-+.+++.-      +   ...|-..+    .+.+++++.
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf------D---~~idyk~~----d~~~~L~~a  215 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF------D---AGIDYKAE----DFAQALKEA  215 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC------c---eeeecCcc----cHHHHHHHH
Confidence            4699999999999999877766566799999998887776665554421      1   12344433    344555555


Q ss_pred             cC-CccEEEeCCcc
Q 044923           91 YG-KLDIMFNNAGI  103 (214)
Q Consensus        91 ~g-~id~li~~ag~  103 (214)
                      .+ .||+.|-|.|-
T Consensus       216 ~P~GIDvyfeNVGg  229 (340)
T COG2130         216 CPKGIDVYFENVGG  229 (340)
T ss_pred             CCCCeEEEEEcCCc
Confidence            54 79999999993

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.06  E-value=0.0033  Score=58.82  Aligned_cols=79  Identities=19%  Similarity=0.261  Sum_probs=60.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCe-------------EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAK-------------VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK   76 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~-------------vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   76 (214)
                      -+.|.++|.|+ |.||+.+++.|++. ++.             |.+++++.+.++++.+...       ++..++.|++|
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-------~~~~v~lDv~D  638 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-------NAEAVQLDVSD  638 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-------CCceEEeecCC
Confidence            35689999997 99999999999975 333             7777877766655554331       35778999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCccc
Q 044923           77 EKDIENAVNTAVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        77 ~~~~~~~~~~~~~~~g~id~li~~ag~~  104 (214)
                      .+++.++++       ++|+||++....
T Consensus       639 ~e~L~~~v~-------~~DaVIsalP~~  659 (1042)
T PLN02819        639 SESLLKYVS-------QVDVVISLLPAS  659 (1042)
T ss_pred             HHHHHHhhc-------CCCEEEECCCch
Confidence            998887766       689999998753

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.05  E-value=0.0029  Score=47.38  Aligned_cols=42  Identities=31%  Similarity=0.387  Sum_probs=35.2

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      ...+.||++.|.|. |.||+++|+.|..-|++|+..+|+....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence            34689999999976 8999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.04  E-value=0.0082  Score=49.29  Aligned_cols=114  Identities=15%  Similarity=0.168  Sum_probs=70.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCC--cchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA-------KVLIADIKD--DLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~   84 (214)
                      ++.|+|++|.+|.++|..|+..+.       .+++.+.++  ++++....++.+..... ..+. +.  -.+.+      
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~------   75 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-AT--TDPEE------   75 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Ee--cChHH------
Confidence            589999999999999999998874       688988865  34555555555432111 0111 11  11112      


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTAS  154 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS  154 (214)
                           .+.+.|++|..||....     ...+.   .+.++.|.    .+.+.+.+.+++..  .+.++++|.
T Consensus        76 -----~~~daDvVVitAG~~~k-----~g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        76 -----AFKDVDAALLVGAFPRK-----PGMER---ADLLSKNG----KIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             -----HhCCCCEEEEeCCCCCC-----CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence                 22378999999997421     12333   45666676    55666666666653  456666664

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.01  E-value=0.018  Score=50.06  Aligned_cols=111  Identities=24%  Similarity=0.298  Sum_probs=67.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-------------
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-------------   77 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-------------   77 (214)
                      ..+.+|+|+|+ |.+|...+..+...|++|++.++++++++..++ +        ...++..|..+.             
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l--------GA~~v~i~~~e~~~~~~gya~~~s~  232 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M--------GAEFLELDFEEEGGSGDGYAKVMSE  232 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c--------CCeEEEeccccccccccchhhhcch
Confidence            56899999987 679999999888999999999998876554433 2        123333333221             


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecC
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTAS  154 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS  154 (214)
                      +..+...+.+.+..+..|++|.++|..+...                     +..+++..+..|++  ++.||.++.
T Consensus       233 ~~~~~~~~~~~~~~~gaDVVIetag~pg~~a---------------------P~lit~~~v~~mkp--GgvIVdvg~  286 (509)
T PRK09424        233 EFIKAEMALFAEQAKEVDIIITTALIPGKPA---------------------PKLITAEMVASMKP--GSVIVDLAA  286 (509)
T ss_pred             hHHHHHHHHHHhccCCCCEEEECCCCCcccC---------------------cchHHHHHHHhcCC--CCEEEEEcc
Confidence            1111112222233357999999999753210                     11234556666664  467777765

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.00  E-value=0.0063  Score=46.90  Aligned_cols=36  Identities=22%  Similarity=0.423  Sum_probs=31.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++++|.|+ ||+|..+++.|++.|.. +.+.+.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            477889999996 89999999999999986 8888765

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.00  E-value=0.0036  Score=51.12  Aligned_cols=73  Identities=23%  Similarity=0.480  Sum_probs=51.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.+++++|.|+ |.+|..+++.|.+.|. +|+++.|+.++.+++.+.+..             ++.+.+++.+.+.    
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-------------~~~~~~~~~~~l~----  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-------------NAVPLDELLELLN----  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-------------eEEeHHHHHHHHh----
Confidence            67899999987 9999999999998774 588899988776666555421             1112233333332    


Q ss_pred             HcCCccEEEeCCccc
Q 044923           90 QYGKLDIMFNNAGIV  104 (214)
Q Consensus        90 ~~g~id~li~~ag~~  104 (214)
                         ..|++|.+.+..
T Consensus       238 ---~aDvVi~at~~~  249 (311)
T cd05213         238 ---EADVVISATGAP  249 (311)
T ss_pred             ---cCCEEEECCCCC
Confidence               579999998853

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.99  E-value=0.035  Score=48.09  Aligned_cols=76  Identities=21%  Similarity=0.227  Sum_probs=50.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|.|+ |++|.++|+.|+++|++|.+.++++. ..+...+.+.+.     .+.+...+-..            
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~-----gv~~~~~~~~~------------   74 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL-----GATVRLGPGPT------------   74 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc-----CCEEEECCCcc------------
Confidence            577899999997 77999999999999999999886543 222333334332     23333322111            


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                       .....|.+|.+.|+.
T Consensus        75 -~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         75 -LPEDTDLVVTSPGWR   89 (480)
T ss_pred             -ccCCCCEEEECCCcC
Confidence             012579999999974

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.99  E-value=0.003  Score=50.81  Aligned_cols=38  Identities=26%  Similarity=0.379  Sum_probs=34.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      .+++||.++|.|+++-.|+.++..|.++|+.|.++.|+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36899999999999999999999999999998887763

>PLN00203 glutamyl-tRNA reductase

Probab=96.97  E-value=0.004  Score=54.25  Aligned_cols=47  Identities=15%  Similarity=0.363  Sum_probs=40.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~   57 (214)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++..|+.++.+.+.+.+
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            378999999999 9999999999999997 5999999988777666554

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.96  E-value=0.0038  Score=42.98  Aligned_cols=71  Identities=24%  Similarity=0.275  Sum_probs=51.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD   95 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id   95 (214)
                      ++|.|.+ -+|+.+++.|.+.+.+|+++.++++..+...+.         .+.++.+|.++++.++++-      ..+.+
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---------~~~~i~gd~~~~~~l~~a~------i~~a~   64 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE---------GVEVIYGDATDPEVLERAG------IEKAD   64 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---------TSEEEES-TTSHHHHHHTT------GGCES
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---------ccccccccchhhhHHhhcC------ccccC
Confidence            4677775 799999999999887999999988765444432         2578899999998877652      12677


Q ss_pred             EEEeCCc
Q 044923           96 IMFNNAG  102 (214)
Q Consensus        96 ~li~~ag  102 (214)
                      .++...+
T Consensus        65 ~vv~~~~   71 (116)
T PF02254_consen   65 AVVILTD   71 (116)
T ss_dssp             EEEEESS
T ss_pred             EEEEccC
Confidence            7776665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.96  E-value=0.014  Score=47.69  Aligned_cols=118  Identities=18%  Similarity=0.193  Sum_probs=67.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCe--EEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCC-CHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAK--VLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVT-KEKDIENAVNTAV   88 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~--vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~   88 (214)
                      +++.|+|++|.+|..++..|+..|..  |+++++++  ++++....++.+..... .... ....+ |.+.    +    
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~-~~~~-~i~~~~d~~~----l----   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAA-GIDA-EIKISSDLSD----V----   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhcc-CCCc-EEEECCCHHH----h----
Confidence            36899999999999999999999864  89999854  44444433333211000 0010 11221 2111    2    


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVC  156 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~  156 (214)
                         .+.|++|.++|....     .+.+.   .+.++.|+    ..++.+.+.+.+. ..+.+|++++..
T Consensus        71 ---~~aDiViitag~p~~-----~~~~r---~dl~~~n~----~i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          71 ---AGSDIVIITAGVPRK-----EGMSR---LDLAKKNA----KIVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             ---CCCCEEEEecCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEeCCch
Confidence               378999999997432     12233   34445565    3344444444333 356778887744

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.96  E-value=0.0059  Score=50.11  Aligned_cols=74  Identities=16%  Similarity=0.208  Sum_probs=53.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+|.+ |+|....+.....|++|+..+|++++.+...+.-.+          ...|-+|++....+.+     
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd----------~~i~~~~~~~~~~~~~-----  228 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGAD----------HVINSSDSDALEAVKE-----  228 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCc----------EEEEcCCchhhHHhHh-----
Confidence            458999999999 999988887777899999999999876655443211          1234445555444433     


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                        .+|+++..++
T Consensus       229 --~~d~ii~tv~  238 (339)
T COG1064         229 --IADAIIDTVG  238 (339)
T ss_pred             --hCcEEEECCC
Confidence              2899999988

>PRK05442 malate dehydrogenase; Provisional

Probab=96.94  E-value=0.0072  Score=49.67  Aligned_cols=115  Identities=12%  Similarity=0.107  Sum_probs=70.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCCc--chhhHHHHhhccC-CCCCCceEEEeeCCCHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-------KVLIADIKDD--LGESVCEDISSSS-SSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~~--~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      +++.|+|++|.+|..+|..|+..+.       .+++.+.++.  +++....++.+.. .....+.+. .  .+       
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~-------   74 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D--DP-------   74 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c--Ch-------
Confidence            4789999999999999999998763       5888888543  3444444444332 100111111 1  11       


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-C-CCCeEEEecC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP-A-GRGSIISTAS  154 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~g~iv~~sS  154 (214)
                          .+.+.+-|++|..||....     ...+.   .+.++.|.    .+.+.+.+.+.+ . ..+.++.+|.
T Consensus        75 ----y~~~~daDiVVitaG~~~k-----~g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         75 ----NVAFKDADVALLVGARPRG-----PGMER---KDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ----HHHhCCCCEEEEeCCCCCC-----CCCcH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                2233478999999997421     12233   55566675    666777777776 3 3567777775

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.93  E-value=0.006  Score=46.58  Aligned_cols=36  Identities=25%  Similarity=0.475  Sum_probs=32.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      .++.++++|.|+ ||+|..+|..|++.|. ++++.+++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            477899999998 7899999999999998 58888876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.93  E-value=0.066  Score=43.99  Aligned_cols=125  Identities=18%  Similarity=0.242  Sum_probs=70.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++.+++.|+|+ |.+|..+|..++..|. .+++.+.+++.++....++..... ......+..  .+|.+.         
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~---------   71 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED---------   71 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH---------
Confidence            45578999995 7899999999999995 899999988765332222221110 011111111  123221         


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVC  156 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~  156 (214)
                        +.+.|++|..+|........-.+.+.   .+.+..|+    .+.+.+.+.+.+.. .+.++++|...
T Consensus        72 --l~~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         72 --IAGSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             --hCCCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence              22789999999985422110001122   34455564    44555666665543 44677777644

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.93  E-value=0.0017  Score=56.13  Aligned_cols=46  Identities=22%  Similarity=0.367  Sum_probs=38.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      ++++|+++|+|+ ||+|++++..|++.|++|++..|+.++.+++.+.
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 7999999999999999999999887766555443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.92  E-value=0.0086  Score=49.87  Aligned_cols=36  Identities=22%  Similarity=0.311  Sum_probs=30.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++..
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            478899999988 89999999999999975 7777654

>PRK14968 putative methyltransferase; Provisional

Probab=96.91  E-value=0.017  Score=43.18  Aligned_cols=124  Identities=21%  Similarity=0.198  Sum_probs=72.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+++++|-.|++.|.   ++..|++++.+++.+..+++..+...+.+........++.++.+|+.+.         ..+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            467889999988877   6666677789999999988777666666554332211267788887542         111 


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHH---HHHHHHHHHhhccCCCCeEEEec
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA---FLGTKHAARVMKPAGRGSIISTA  153 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~---~~~~~~~~~~~~~~~~g~iv~~s  153 (214)
                       +.+|.++.|..+....  +.... .+.+...+.....+.   -.+.+.+.+.++..  |.++++.
T Consensus        89 -~~~d~vi~n~p~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~g--G~~~~~~  148 (188)
T PRK14968         89 -DKFDVILFNPPYLPTE--EEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKPG--GRILLLQ  148 (188)
T ss_pred             -cCceEEEECCCcCCCC--chhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCCC--eEEEEEE
Confidence             1689999998765321  11111 112222222222221   23556777777664  4555443

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.91  E-value=0.0093  Score=46.47  Aligned_cols=83  Identities=17%  Similarity=0.278  Sum_probs=52.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC-------------------cchhhHHHHhhccCCCCCCceE
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKD-------------------DLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      .+++++|+|.| .||+|.++++.|++.|.. +.+++...                   .+.+.+.+.+.+..+ ..++..
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~i~~   95 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-DVEIEA   95 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC-CCEEEE
Confidence            47788999998 579999999999999975 66664321                   222333444433322 234555


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      +..+++ .+.+.++++       ..|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            555663 334444433       6889888866

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.90  E-value=0.0047  Score=50.12  Aligned_cols=40  Identities=28%  Similarity=0.348  Sum_probs=35.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      .++.+++++|.|. |++|+.++..|...|++|.+..|+.+.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            3568999999997 679999999999999999999998654

>PRK04148 hypothetical protein; Provisional

Probab=96.87  E-value=0.0027  Score=45.01  Aligned_cols=57  Identities=18%  Similarity=0.113  Sum_probs=44.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK   78 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   78 (214)
                      -+++.+++.|.+  -|.++|+.|++.|++|+.++.+++..+...+.         .+.++.+|+.+++
T Consensus        15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---------~~~~v~dDlf~p~   71 (134)
T PRK04148         15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---------GLNAFVDDLFNPN   71 (134)
T ss_pred             ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---------CCeEEECcCCCCC
Confidence            356789999998  78889999999999999999998765444332         3567788888754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.87  E-value=0.0031  Score=46.75  Aligned_cols=39  Identities=26%  Similarity=0.372  Sum_probs=35.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .+++||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999977789999999999999998888864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.86  E-value=0.0095  Score=50.19  Aligned_cols=48  Identities=27%  Similarity=0.506  Sum_probs=41.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDIS   58 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~   58 (214)
                      ++++|++||.|+ |-+|.-+|++|+++|. +|+++.|+.++++++.+++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            488999999997 4699999999999995 58899999999888888765

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.82  E-value=0.02  Score=40.22  Aligned_cols=79  Identities=19%  Similarity=0.326  Sum_probs=53.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCeEE-EEecCCc--chhh-----------------HHHHhhccCCCCCCceEEEee
Q 044923           15 VALITGGAGSIGECAARLFSK-HGAKVL-IADIKDD--LGES-----------------VCEDISSSSSSANGCSYVHCD   73 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~-~g~~vi-~~~r~~~--~~~~-----------------~~~~~~~~~~~~~~v~~~~~D   73 (214)
                      ++.|.|++|-+|+.+++.+.+ .+..++ .+.|+.+  ..++                 +.+.+..        .=+..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--------~DVvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--------ADVVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---------SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------CCEEEE
Confidence            589999999999999999999 678855 4455541  1111                 1111111        115679


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCcc
Q 044923           74 VTKEKDIENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      +|.++.+.+.++...++  ++.+++-..|+
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999888877  77899988886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.79  E-value=0.042  Score=45.10  Aligned_cols=120  Identities=19%  Similarity=0.261  Sum_probs=71.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCce-EEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCS-YVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+.+++.|+|| |.+|..++..++..| ..+++.+.+++.++...-++...... .... .+.+ .+|.+.    ++   
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~-~~~~~~i~~-~~d~~~----l~---   72 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTL-VGSNINILG-TNNYED----IK---   72 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccc-cCCCeEEEe-CCCHHH----hC---
Confidence            46778999997 889999999999998 67999999887655433333222110 0111 1111 123222    22   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVC  156 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~  156 (214)
                          +.|++|.++|....     ...+.   ...+..|.    -+.+.+.+.+.+.. .+.++++|...
T Consensus        73 ----~ADiVVitag~~~~-----~g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         73 ----DSDVVVITAGVQRK-----EEMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             ----CCCEEEECCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence                77999999997532     12233   34555665    34455555555443 45577776644

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.76  E-value=0.012  Score=43.98  Aligned_cols=31  Identities=26%  Similarity=0.462  Sum_probs=26.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCe-EEEEecCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAK-VLIADIKD   47 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~   47 (214)
                      ++|.|+ ||+|..+++.|++.|.. +.+.+.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            678875 89999999999999985 88887754

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.76  E-value=0.018  Score=40.98  Aligned_cols=80  Identities=20%  Similarity=0.341  Sum_probs=49.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC-------------------cchhhHHHHhhccCCCCCCceEEEe
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAK-VLIADIKD-------------------DLGESVCEDISSSSSSANGCSYVHC   72 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~   72 (214)
                      +++++|.|+ ||+|.++++.|++.|.. +.+++...                   .+.+...+.+.+..+ ..++..+..
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-DVEVEAIPE   79 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-TSEEEEEES
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-ceeeeeeec
Confidence            467777775 68999999999999985 77876532                   122233333333322 234566666


Q ss_pred             eCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           73 DVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        73 D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      ++ +++...++++       ..|++|.+..
T Consensus        80 ~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   80 KI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             cc-cccccccccc-------CCCEEEEecC
Confidence            66 3444555553       6688887755

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.76  E-value=0.21  Score=40.06  Aligned_cols=176  Identities=11%  Similarity=0.114  Sum_probs=96.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHH-cCCeEEEEec--CC-cch--------hhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSK-HGAKVLIADI--KD-DLG--------ESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r--~~-~~~--------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      |+|||.|+|+|.|.+.--..+- .|++.+-+.-  .. +.-        ...-.+...+.+  .-..-+..|.-+.+--+
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kG--lyAksingDaFS~e~k~  119 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKG--LYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcC--ceeeecccchhhHHHHH
Confidence            8999999999999775443332 4666443321  11 100        011111111111  11234567888888889


Q ss_pred             HHHHHHHHHcCCccEEEeCCcccCCCCCC--------------------------------CCCCCHHHHHHHHhhhhhH
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGIVDEAKPN--------------------------------ILDNDQAEFERILSVNLVG  129 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~~~~~~~~--------------------------------~~~~~~~~~~~~~~~n~~~  129 (214)
                      ++++.|++.+|++|.+|+.-+..-...+.                                ++-.+.+++..++.  ++|
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VMG  197 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VMG  197 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hhC
Confidence            99999999999999999885543211110                                00112233333322  222


Q ss_pred             HHHHHHHHHHhhcc---CCCCeEEEecCCCcccCCC--CCccchhhHHHHHHHHHHHHHHHccCCcEEE
Q 044923          130 AFLGTKHAARVMKP---AGRGSIISTASVCGVIGGV--TSHAYTSSKHGVVGLMKNTAVELGRFGIRVN  193 (214)
Q Consensus       130 ~~~~~~~~~~~~~~---~~~g~iv~~sS~~~~~~~~--~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~  193 (214)
                      --..-.+.-.++.+   ..+.+-+..|-.+.....|  ....-+.+|.-++.-++.+...++..|=..+
T Consensus       198 GeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~  266 (398)
T COG3007         198 GEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGAR  266 (398)
T ss_pred             cchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCee
Confidence            22222222222211   1123455556655554443  4467799999999999999988877654444

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.74  E-value=0.0056  Score=47.62  Aligned_cols=74  Identities=27%  Similarity=0.387  Sum_probs=54.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHH-HHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENA-VNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~~~g~   93 (214)
                      .++|.|+ |-+|+.+|+.|.++|++|+++.++++..++.....       ..+..+.+|.+|++.+.++ +.       .
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-------~~~~~v~gd~t~~~~L~~agi~-------~   66 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-------LDTHVVIGDATDEDVLEEAGID-------D   66 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-------cceEEEEecCCCHHHHHhcCCC-------c
Confidence            4566665 56899999999999999999999987665533321       1467889999998877665 22       6


Q ss_pred             ccEEEeCCcc
Q 044923           94 LDIMFNNAGI  103 (214)
Q Consensus        94 id~li~~ag~  103 (214)
                      .|+++-..|-
T Consensus        67 aD~vva~t~~   76 (225)
T COG0569          67 ADAVVAATGN   76 (225)
T ss_pred             CCEEEEeeCC
Confidence            7777776664

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.73  E-value=0.0082  Score=49.54  Aligned_cols=77  Identities=22%  Similarity=0.380  Sum_probs=49.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+|++++|+|+ |++|...++.+...|+ +|+++.+++++.+... ++..      . .  ..|..+. ++.+    +.+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa------~-~--vi~~~~~-~~~~----~~~  231 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGA------D-K--LVNPQND-DLDH----YKA  231 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCC------c-E--EecCCcc-cHHH----Hhc
Confidence            36899999986 8999999988888898 5888888876654332 2211      1 1  1233332 2222    222


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                      ..+.+|++|.++|.
T Consensus       232 ~~g~~D~vid~~G~  245 (343)
T PRK09880        232 EKGYFDVSFEVSGH  245 (343)
T ss_pred             cCCCCCEEEECCCC
Confidence            23569999999883

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.72  E-value=0.0089  Score=48.71  Aligned_cols=43  Identities=23%  Similarity=0.374  Sum_probs=35.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      -+|.+++|.||++++|..+++.....|++|+.+.+++++.+.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3689999999999999999888888899999888877654443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.72  E-value=0.026  Score=46.20  Aligned_cols=117  Identities=11%  Similarity=0.093  Sum_probs=73.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++.|+|+ |.+|..+|..|+..|.  .+++++.+++.++....++...........+..  -+|.+.           +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH-----------h
Confidence            57899996 9999999999998875  499999988777766666665432111111111  123222           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVC  156 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~  156 (214)
                      .+.|++|..||....     ...+.   ...++.|.    .+.+.+.+.+.+. ..+.++++|...
T Consensus        70 ~~adivvitaG~~~k-----~g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          70 ANSKVVIVTAGARQN-----EGESR---LDLVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             CCCCEEEECCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCcEEEEccChH
Confidence            278999999997532     12344   34566665    4455555555544 356777777543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.70  E-value=0.0077  Score=51.58  Aligned_cols=39  Identities=28%  Similarity=0.536  Sum_probs=33.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      ++.|+||+|++|.++++.|.+.|.+|.+.+|+++..++.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            589999999999999999999999999999987654333

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.70  E-value=0.0095  Score=48.07  Aligned_cols=41  Identities=34%  Similarity=0.487  Sum_probs=35.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      .++++++|+|+++++|..+++.+...|++|+++.++++..+
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35789999999999999999999999999999888765543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.68  E-value=0.024  Score=46.28  Aligned_cols=113  Identities=14%  Similarity=0.171  Sum_probs=67.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|.|+ |.+|..+|..|+.+|  ..|++.+++++..+....++............. .  +|.+           .+.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCHH-----------HhC
Confidence            4788998 899999999999999  469999998877664444444322111111111 1  2222           123


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTAS  154 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS  154 (214)
                      +.|++|.++|.....     ..+   ..+.+..|.    .+.+.+.+.+.+. ..|.+++++.
T Consensus        67 ~aDiViita~~~~~~-----~~~---r~dl~~~n~----~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKP-----GET---RLDLLKRNV----AIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCC-----CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            789999999974321     122   344566665    4444444444433 3466776655

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.68  E-value=0.013  Score=47.81  Aligned_cols=80  Identities=19%  Similarity=0.322  Sum_probs=51.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .++.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+...+.+.        +. ...|..+.+..+++. +... 
T Consensus       144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g--------~~-~~~~~~~~~~~~~v~-~~~~-  212 (329)
T cd05288         144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG--------FD-AAINYKTPDLAEALK-EAAP-  212 (329)
T ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC--------Cc-eEEecCChhHHHHHH-Hhcc-
Confidence            357899999999999999999999999999988877655443322121        10 112223332222222 2221 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                       +++|+++.+.|
T Consensus       213 -~~~d~vi~~~g  223 (329)
T cd05288         213 -DGIDVYFDNVG  223 (329)
T ss_pred             -CCceEEEEcch
Confidence             47999999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.67  E-value=0.017  Score=44.23  Aligned_cols=36  Identities=28%  Similarity=0.434  Sum_probs=33.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      +++||.+||.|| |.+|...++.|.+.|++|.++.+.
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            689999999998 889999999999999999988764

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.66  E-value=0.014  Score=49.03  Aligned_cols=115  Identities=10%  Similarity=0.105  Sum_probs=71.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-e----EEE----EecCCcchhhHHHHhhccC-CCCCCceEEEeeCCCHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-K----VLI----ADIKDDLGESVCEDISSSS-SSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~----vi~----~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      =++.|+|++|.+|.++|-.|+..+. .    +.+    ++++.+.++....++.+.. .....+.+ ..  .+.+     
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y~-----  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPYE-----  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCHH-----
Confidence            3599999999999999999998873 3    333    3778888877777776543 11111111 11  1222     


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-C-CCCeEEEecC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP-A-GRGSIISTAS  154 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~g~iv~~sS  154 (214)
                            .+.+.|++|..||....     ...+.   .+.++.|.    .+++...+.+.+ . ..+.+|++|.
T Consensus       117 ------~~kdaDIVVitAG~prk-----pg~tR---~dll~~N~----~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       117 ------VFEDADWALLIGAKPRG-----PGMER---ADLLDING----QIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ------HhCCCCEEEECCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCC
Confidence                  22378999999997421     12233   44666675    566666666665 3 3566666665

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.65  E-value=0.012  Score=46.81  Aligned_cols=78  Identities=18%  Similarity=0.289  Sum_probs=53.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcC----CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           16 ALITGGAGSIGECAARLFSKHG----AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +.|+||+|.+|..++..|+..|    ..|++.+.++++++....++++.........+   -.++  +..+.+       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i---~~~~--d~~~~~-------   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKV---SITD--DPYEAF-------   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEE---EECC--chHHHh-------
Confidence            4689998899999999999999    67999999988888777777654321101111   1111  122222       


Q ss_pred             CCccEEEeCCcccC
Q 044923           92 GKLDIMFNNAGIVD  105 (214)
Q Consensus        92 g~id~li~~ag~~~  105 (214)
                      .+.|++|..+|...
T Consensus        69 ~~aDiVv~t~~~~~   82 (263)
T cd00650          69 KDADVVIITAGVGR   82 (263)
T ss_pred             CCCCEEEECCCCCC
Confidence            37899999999753

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.64  E-value=0.039  Score=44.87  Aligned_cols=114  Identities=17%  Similarity=0.219  Sum_probs=71.6

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           17 LITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        17 lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      .|.|+ |++|..+|..|+..|  ..+++.+.++++++....++.+.......+.+..+  +|.+.           +...
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~-----------l~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD-----------AADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH-----------hCCC
Confidence            57787 679999999999998  46999999998888777777665432111222211  22221           2378


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVC  156 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~  156 (214)
                      |++|.++|....     ...+.   ...+..|+    .+.+.+.+.+++. ..+.++++|...
T Consensus        68 DiVIitag~p~~-----~~~~R---~~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sNP~  118 (300)
T cd00300          68 DIVVITAGAPRK-----PGETR---LDLINRNA----PILRSVITNLKKYGPDAIILVVSNPV  118 (300)
T ss_pred             CEEEEcCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccChH
Confidence            999999997432     12233   34455565    4555555555544 356777777544

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PLN02602 lactate dehydrogenase

Probab=96.64  E-value=0.034  Score=46.22  Aligned_cols=115  Identities=11%  Similarity=0.100  Sum_probs=72.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++.|+|+ |.+|.++|..|+..+.  .+++.+.+++.++....++.+.......+ .+.. -+|.+.           +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~~-----------~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYAV-----------T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHHH-----------h
Confidence            68999996 9999999999998875  49999998887777777766543211111 1221 122221           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      .+-|++|..||....     ...+.   .+.+..|.    .+.+.+.+.+.+.. .+.+++++.
T Consensus       104 ~daDiVVitAG~~~k-----~g~tR---~dll~~N~----~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        104 AGSDLCIVTAGARQI-----PGESR---LNLLQRNV----ALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCCEEEECCCCCCC-----cCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            378999999997432     12333   34455565    45555555555443 566777775

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.60  E-value=0.12  Score=44.40  Aligned_cols=77  Identities=21%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++.+|+++|+|.+ |.|.++|+.|+++|++|.+.+.+....  ..+.++...   ..+.+...+.. ..    .+     
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~---~gi~~~~g~~~-~~----~~-----   65 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF---DGLVFYTGRLK-DA----LD-----   65 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc---CCcEEEeCCCC-HH----HH-----
Confidence            3678999999986 999999999999999999887655421  112232210   12333333221 11    11     


Q ss_pred             HcCCccEEEeCCccc
Q 044923           90 QYGKLDIMFNNAGIV  104 (214)
Q Consensus        90 ~~g~id~li~~ag~~  104 (214)
                        ...|.||...|+.
T Consensus        66 --~~~d~vv~spgi~   78 (445)
T PRK04308         66 --NGFDILALSPGIS   78 (445)
T ss_pred             --hCCCEEEECCCCC
Confidence              2679999999975

>PLN02928 oxidoreductase family protein

Probab=96.56  E-value=0.015  Score=48.22  Aligned_cols=38  Identities=32%  Similarity=0.359  Sum_probs=34.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ..+.||++.|.|- |.||+++|+.|..-|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3589999999997 8899999999999999999988864

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.54  E-value=0.031  Score=45.66  Aligned_cols=145  Identities=14%  Similarity=0.129  Sum_probs=80.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|++|.+|.++|..|+..+.  .+++.+.++  .+....++.+...   .+.+..+.- + ++.       .+.+.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~---~~~i~~~~~-~-~~~-------~~~~~   66 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPT---AASVKGFSG-E-EGL-------ENALK   66 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCc---CceEEEecC-C-Cch-------HHHcC
Confidence            378999999999999999999875  588888876  2222222322111   111111110 1 111       12234


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcc------------c
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGV------------I  159 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~------------~  159 (214)
                      +.|++|..||....     ...+.   .+.++.|+    ...+...+.+.+. ..+.++++|...=.            .
T Consensus        67 daDivvitaG~~~~-----~g~~R---~dll~~N~----~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~s  134 (312)
T TIGR01772        67 GADVVVIPAGVPRK-----PGMTR---DDLFNVNA----GIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKG  134 (312)
T ss_pred             CCCEEEEeCCCCCC-----CCccH---HHHHHHhH----HHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhc
Confidence            88999999997422     12233   44566676    4555555555544 35677777775522            1


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                      +.|.....+.+-.--..|-..++.++
T Consensus       135 g~p~~rViG~g~LDsaR~r~~la~~l  160 (312)
T TIGR01772       135 VYDPNKLFGVTTLDIVRANTFVAELK  160 (312)
T ss_pred             CCChHHEEeeecchHHHHHHHHHHHh
Confidence            23333344444333344666666665

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.54  E-value=0.064  Score=44.36  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=35.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      -+|++++|.|+ |++|...++.+...|++|+++.+++++.+..
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            35899999999 9999999998888999999888887665433

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.53  E-value=0.0096  Score=42.72  Aligned_cols=39  Identities=36%  Similarity=0.549  Sum_probs=35.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      -+++||.++|.|.|.-+|+.++..|.++|+.|.++.++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            478999999999999999999999999999999887544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.52  E-value=0.014  Score=47.21  Aligned_cols=43  Identities=23%  Similarity=0.375  Sum_probs=36.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      .++++++|+|+++++|.++++.+...|++++++.++.++.+.+
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            3578999999999999999999999999999988876554433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.49  E-value=0.023  Score=43.33  Aligned_cols=74  Identities=15%  Similarity=0.203  Sum_probs=46.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccC-C-------CCCCceEEEeeCCCHHHHHHHHHH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSS-S-------SANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~-~-------~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .+.+||+|-||.+++++|++.|+.|++..|+.+ ..+...+.+...- +       ....+.++..-   .+.+..+..+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            456788999999999999999999999866554 4444444433210 0       00112222211   4556677777


Q ss_pred             HHHHcC
Q 044923           87 AVSQYG   92 (214)
Q Consensus        87 ~~~~~g   92 (214)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            777664

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.47  E-value=0.039  Score=45.02  Aligned_cols=145  Identities=12%  Similarity=0.154  Sum_probs=85.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCC--CCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           16 ALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSA--NGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +.|+|+ |.+|..+|..|+.++.  .+++.+.+++.++....++.....-.  .++.+..   .|.+.           +
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~-----------~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDD-----------C   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHH-----------h
Confidence            678898 9999999999999885  49999998887777777776532211  1223332   23222           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCccc--------CCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVI--------GGV  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--------~~~  162 (214)
                      .+-|++|..||.....     ..+. +=.+.++.|.    .+.+...+.+.+.+ .+.++.+|-..-..        +.|
T Consensus        67 ~~aDivvitaG~~~kp-----g~tr-~R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg~p  136 (307)
T cd05290          67 ADADIIVITAGPSIDP-----GNTD-DRLDLAQTNA----KIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFDYP  136 (307)
T ss_pred             CCCCEEEECCCCCCCC-----CCCc-hHHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhCcC
Confidence            3789999999974321     1221 0134556665    66677777776664 45556555532221        233


Q ss_pred             CCccchh-hHHHHHHHHHHHHHHH
Q 044923          163 TSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       163 ~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      .....+. +-.--..|-..++.++
T Consensus       137 ~~rviG~gt~LDs~R~~~~la~~l  160 (307)
T cd05290         137 ANKVIGTGTMLDTARLRRIVADKY  160 (307)
T ss_pred             hhheecccchHHHHHHHHHHHHHh
Confidence            3333444 2233444556666665

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08223 hypothetical protein; Validated

Probab=96.46  E-value=0.019  Score=46.11  Aligned_cols=36  Identities=28%  Similarity=0.406  Sum_probs=30.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++.+|+|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            477889999987 59999999999999975 7777654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.44  E-value=0.034  Score=39.85  Aligned_cols=31  Identities=23%  Similarity=0.413  Sum_probs=26.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      +++|.|+ ||+|.++++.|++.|.. +.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 89999999999999984 7777654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.42  E-value=0.013  Score=50.33  Aligned_cols=78  Identities=24%  Similarity=0.353  Sum_probs=55.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ...+.++|.|+ |.+|+.+++.|.+.|.+|+++.++++..+...+...       .+.++.+|.++++.+.++-      
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~-------~~~~i~gd~~~~~~L~~~~------  294 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELP-------NTLVLHGDGTDQELLEEEG------  294 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCC-------CCeEEECCCCCHHHHHhcC------
Confidence            45688999999 999999999999999999999988876555444321       3456778888877654331      


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..+.|.+|...+
T Consensus       295 ~~~a~~vi~~~~  306 (453)
T PRK09496        295 IDEADAFIALTN  306 (453)
T ss_pred             CccCCEEEECCC
Confidence            125566664433

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.40  E-value=0.033  Score=46.64  Aligned_cols=36  Identities=25%  Similarity=0.440  Sum_probs=30.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++..
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            467888999987 6999999999999997 57777664

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.38  E-value=0.011  Score=43.50  Aligned_cols=42  Identities=29%  Similarity=0.354  Sum_probs=32.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      -+++||+++|.|.|.-+|+.++..|.++|+.|.++..+.+.+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l   73 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL   73 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc
Confidence            468999999999999999999999999999998876655443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.35  E-value=0.011  Score=47.46  Aligned_cols=38  Identities=26%  Similarity=0.448  Sum_probs=34.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +++||.++|+|.|.-+|+.++..|.++|++|.++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            68999999999999999999999999999998887643

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.33  E-value=0.062  Score=43.87  Aligned_cols=145  Identities=15%  Similarity=0.125  Sum_probs=81.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|++|.+|.++|..|+.++.  .+++++.+  .++...-++.+...   .+.+..+. .+ +++       .+.+.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~---~~~i~~~~-~~-~~~-------y~~~~   67 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT---PAKVTGYL-GP-EEL-------KKALK   67 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC---cceEEEec-CC-Cch-------HHhcC
Confidence            578999999999999999999884  58888887  33333333433211   11111110 11 111       12233


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCC-------cc-----c
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVC-------GV-----I  159 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~-------~~-----~  159 (214)
                      +.|++|..||....     ...+.   .+.++.|.    ...+...+.+++. ..+.++++|...       .+     .
T Consensus        68 daDivvitaG~~~k-----~g~tR---~dll~~N~----~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s  135 (310)
T cd01337          68 GADVVVIPAGVPRK-----PGMTR---DDLFNINA----GIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAG  135 (310)
T ss_pred             CCCEEEEeCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhc
Confidence            78999999997422     12233   45566676    4444455554443 356777777765       21     1


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                      +.|.....+.+..--..|...++.++
T Consensus       136 ~~p~~rviG~~~LDs~R~~~~la~~l  161 (310)
T cd01337         136 VYDPKRLFGVTTLDVVRANTFVAELL  161 (310)
T ss_pred             CCCHHHEEeeechHHHHHHHHHHHHh
Confidence            23333355554333345666666665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02494 adenosylhomocysteinase

Probab=96.32  E-value=0.056  Score=46.43  Aligned_cols=39  Identities=31%  Similarity=0.503  Sum_probs=34.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      .+.||+++|.|.+ .||+.+|+.+...|++|+++.+++.+
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4789999999987 89999999999999999998887654

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.31  E-value=0.022  Score=46.04  Aligned_cols=43  Identities=21%  Similarity=0.307  Sum_probs=37.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      -+++||.+.|.|.++-+|+.+|..|.++|++|.++.++...++
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            3689999999999999999999999999999999876654433

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.30  E-value=0.037  Score=44.89  Aligned_cols=63  Identities=21%  Similarity=0.315  Sum_probs=46.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC-CHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT-KEKDIENAVN   85 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~   85 (214)
                      .|+++.|+|++| ||. ++-+++++ |++|+++++...+-++..+.+...        . -.|.+ |++.+.++.+
T Consensus       181 pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd--------~-fv~~~~d~d~~~~~~~  245 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD--------V-FVDSTEDPDIMKAIMK  245 (360)
T ss_pred             CCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc--------e-eEEecCCHHHHHHHHH
Confidence            799999999998 885 55566665 999999999987767666665432        1 25666 7777777766

>PRK08328 hypothetical protein; Provisional

Probab=96.30  E-value=0.042  Score=42.94  Aligned_cols=36  Identities=22%  Similarity=0.414  Sum_probs=29.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++++.|++.|.. +.+++..
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467788999986 59999999999999975 7777654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.26  E-value=0.011  Score=45.78  Aligned_cols=42  Identities=24%  Similarity=0.364  Sum_probs=36.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      ++.|+||+|.+|.++++.|++.|++|.+.+|++++.+.....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            488999999999999999999999999999988777665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.26  E-value=0.042  Score=43.19  Aligned_cols=36  Identities=25%  Similarity=0.450  Sum_probs=29.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|..+++.|++.|.. +.+++++
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            477888998876 59999999999999975 7777664

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.24  E-value=0.026  Score=46.00  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=25.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      +|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788886 89999999999999976 7777654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.23  E-value=0.033  Score=42.45  Aligned_cols=36  Identities=25%  Similarity=0.308  Sum_probs=29.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++++|.|+ +|+|.++++.|+..|.. +.+++..
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            467889999975 55999999999999986 7777654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.22  E-value=0.29  Score=38.72  Aligned_cols=146  Identities=18%  Similarity=0.318  Sum_probs=88.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|.++||--|.||+|..+++.+...|+++|.+..+.++.+..++.     +     -....|.+.++-++++.+ +- +
T Consensus       145 kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken-----G-----~~h~I~y~~eD~v~~V~k-iT-n  212 (336)
T KOG1197|consen  145 KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN-----G-----AEHPIDYSTEDYVDEVKK-IT-N  212 (336)
T ss_pred             CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc-----C-----CcceeeccchhHHHHHHh-cc-C
Confidence            3688999999999999999999999999999998887665444332     1     112356665554443332 11 1


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  161 (214)
                      ..++|+++...|--.             +.               .-+..++.  .|.+|...-+.+..+.         
T Consensus       213 gKGVd~vyDsvG~dt-------------~~---------------~sl~~Lk~--~G~mVSfG~asgl~~p~~l~~ls~k  262 (336)
T KOG1197|consen  213 GKGVDAVYDSVGKDT-------------FA---------------KSLAALKP--MGKMVSFGNASGLIDPIPLNQLSPK  262 (336)
T ss_pred             CCCceeeeccccchh-------------hH---------------HHHHHhcc--CceEEEeccccCCCCCeehhhcChh
Confidence            236999988877321             11               11223333  4677777666665432         


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEeCC
Q 044923          162 ------VTSHAYTSSKHGVVGLMKNTAVEL--GRFGIRVNCVSPY  198 (214)
Q Consensus       162 ------~~~~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~Pg  198 (214)
                            |....|-....-+..++--+-.+.  +.-+++++.+.|-
T Consensus       263 ~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  263 ALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             hhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence                  222355555555555444444443  3346788888774

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.21  E-value=0.039  Score=46.03  Aligned_cols=80  Identities=20%  Similarity=0.279  Sum_probs=52.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      -.|.+++|.|+ ++||...++.+...|+ +|+.+++++++.+.. +++.   .   . .+  .|..+. +++.+.+.++.
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lG---a---~-~~--i~~~~~~~~~~~~v~~~~  253 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFG---A---T-DC--VNPKDHDKPIQQVLVEMT  253 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcC---C---C-EE--EcccccchHHHHHHHHHh
Confidence            35899999975 8999999998888999 688888887765543 2221   1   1 11  233332 23444444332


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +++|+++.+.|.
T Consensus       254 ~--~g~d~vid~~g~  266 (368)
T cd08300         254 D--GGVDYTFECIGN  266 (368)
T ss_pred             C--CCCcEEEECCCC
Confidence            2  379999998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.18  E-value=0.034  Score=36.24  Aligned_cols=36  Identities=33%  Similarity=0.681  Sum_probs=30.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEec
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHG-AKVLIADI   45 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r   45 (214)
                      .++++|+++|.|. |+.|+.+++.|.+.+ .++.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3578999999999 999999999999984 55666655

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.17  E-value=0.037  Score=46.21  Aligned_cols=80  Identities=19%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|.+++|+|+ ++||...++.+...|+ +|+.+.+++++.+... ++..      . .  ..|..+ .+++.+.+.++.
T Consensus       184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~Ga------~-~--~i~~~~~~~~~~~~v~~~~  252 (368)
T TIGR02818       184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KLGA------T-D--CVNPNDYDKPIQEVIVEIT  252 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCC------C-e--EEcccccchhHHHHHHHHh
Confidence            35789999985 8999999888888898 6888888776554442 2211      1 1  123332 222333333332


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       253 ~--~g~d~vid~~G~  265 (368)
T TIGR02818       253 D--GGVDYSFECIGN  265 (368)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.16  E-value=0.035  Score=46.58  Aligned_cols=80  Identities=24%  Similarity=0.312  Sum_probs=51.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      -.|++++|.|+ |+||...++.+...|+ +|+++++++++.+...+ +.   .   . .+  .|..+. +.+.+.+.++.
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~G---a---~-~~--i~~~~~~~~~~~~v~~~~  265 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MG---I---T-DF--INPKDSDKPVHERIREMT  265 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cC---C---c-EE--EecccccchHHHHHHHHh
Confidence            35889999986 8999999998888898 58888888766544422 21   0   1 11  233332 12333333322


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       266 ~--~g~dvvid~~G~  278 (381)
T PLN02740        266 G--GGVDYSFECAGN  278 (381)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  269999999984

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.15  E-value=0.031  Score=47.52  Aligned_cols=40  Identities=25%  Similarity=0.511  Sum_probs=35.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      .+.||+++|.|. |.||+.+++.|...|++|+++.+++.+.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            468999999997 6899999999999999999998877553

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.15  E-value=0.028  Score=46.12  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=49.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..|++++|+|+ |++|..+++.+...|++ |+++.+++++.+.. +++.        .. ...|..+.+ .+++.+ +..
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~g--------a~-~~i~~~~~~-~~~~~~-~~~  228 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALG--------AD-FVINSGQDD-VQEIRE-LTS  228 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC--------CC-EEEcCCcch-HHHHHH-HhC
Confidence            35899999986 89999999988889999 88888876654433 2221        11 112333333 222221 111


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                       ..++|++|.+.|.
T Consensus       229 -~~~~d~vid~~g~  241 (339)
T cd08239         229 -GAGADVAIECSGN  241 (339)
T ss_pred             -CCCCCEEEECCCC
Confidence             1268999998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK07877 hypothetical protein; Provisional

Probab=96.15  E-value=0.028  Score=50.97  Aligned_cols=82  Identities=17%  Similarity=0.250  Sum_probs=52.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCC------------------cchhhHHHHhhccCCCCCCceE
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKD------------------DLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      .+++++|+|.|.  |+|..++..|+..|.  ++.+++...                  .+.+..++.+.+.. +..+|..
T Consensus       104 ~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in-p~i~v~~  180 (722)
T PRK07877        104 RLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD-PYLPVEV  180 (722)
T ss_pred             HHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC-CCCEEEE
Confidence            478899999999  399999999999994  688876532                  12222333333322 2335666


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      +...++ +++++++++       ++|+||.+.-
T Consensus       181 ~~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        181 FTDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             EeccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            666666 455555554       5677766654

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.12  E-value=0.029  Score=45.44  Aligned_cols=77  Identities=22%  Similarity=0.309  Sum_probs=51.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+.+++|+|+++++|..+++.+...|++|+.+.++.+..+.+ +.+    +    +.. ..|..+.+....    +.+..
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~----g----~~~-~~~~~~~~~~~~----~~~~~  207 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL----G----ADV-AVDYTRPDWPDQ----VREAL  207 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc----C----CCE-EEecCCccHHHH----HHHHc
Confidence            478999999999999999999999999999988877654433 221    1    111 123333333332    22222


Q ss_pred             --CCccEEEeCCc
Q 044923           92 --GKLDIMFNNAG  102 (214)
Q Consensus        92 --g~id~li~~ag  102 (214)
                        .++|+++++.|
T Consensus       208 ~~~~~d~vl~~~g  220 (324)
T cd08244         208 GGGGVTVVLDGVG  220 (324)
T ss_pred             CCCCceEEEECCC
Confidence              25999999877

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.12  E-value=0.15  Score=41.48  Aligned_cols=117  Identities=19%  Similarity=0.247  Sum_probs=65.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++.|+|+ |-+|..+|..++..|. .|++.+++++.++....++.+..... ... .+.. .+|.+.           +
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~-~i~~-~~d~~~-----------~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDT-KITG-TNDYED-----------I   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCc-EEEe-CCCHHH-----------H
Confidence            57899999 8899999999999875 89999998876654433333221100 011 1111 122211           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVC  156 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~  156 (214)
                      .+.|++|.++|....     .+.+.   ...+.-|+    ...+.+.+.+.+. ..+.+|+++...
T Consensus        69 ~~aDiVii~~~~p~~-----~~~~r---~~~~~~n~----~i~~~i~~~i~~~~~~~~viv~tNP~  122 (307)
T PRK06223         69 AGSDVVVITAGVPRK-----PGMSR---DDLLGINA----KIMKDVAEGIKKYAPDAIVIVVTNPV  122 (307)
T ss_pred             CCCCEEEECCCCCCC-----cCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            278999999997431     12232   23333444    3444444444433 235566666533

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.11  E-value=0.026  Score=46.64  Aligned_cols=37  Identities=11%  Similarity=0.247  Sum_probs=29.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCe---EEEEecCCcch
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAK---VLIADIKDDLG   50 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~---vi~~~r~~~~~   50 (214)
                      +++.|.||||.+|.++++.|+++++.   +..+.++.+..
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g   41 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG   41 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC
Confidence            57999999999999999999998765   45555554333

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.09  E-value=0.039  Score=44.48  Aligned_cols=40  Identities=30%  Similarity=0.402  Sum_probs=34.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      -+|.+++|.|+++++|.++++.....|++|+.+.+++++.
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            4578999999999999999999999999999888876544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.07  E-value=0.034  Score=46.06  Aligned_cols=34  Identities=32%  Similarity=0.477  Sum_probs=30.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      .|++++|+|+ |++|...++.+...|++|+++.|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            6889999986 999999998888889999998884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.06  E-value=0.043  Score=45.72  Aligned_cols=80  Identities=19%  Similarity=0.315  Sum_probs=50.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      -+|.+++|.|+ +++|...++.+...|+ +|+++.+++++.+.+ +++.   .   . .+  .|..+. +++.+.+.++.
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~G---a---~-~~--i~~~~~~~~~~~~v~~~~  254 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFG---V---T-EF--VNPKDHDKPVQEVIAEMT  254 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcC---C---c-eE--EcccccchhHHHHHHHHh
Confidence            35899999985 8999999988888898 799888887655433 2221   1   1 11  222221 23433333332


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|+++.+.|.
T Consensus       255 ~--~~~d~vid~~G~  267 (369)
T cd08301         255 G--GGVDYSFECTGN  267 (369)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.04  E-value=0.04  Score=44.60  Aligned_cols=38  Identities=29%  Similarity=0.359  Sum_probs=34.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKD   47 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~   47 (214)
                      +++||+++|.|-++-+|+.+|..|.++|+.|.++. |+.
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            68999999999999999999999999999999984 554

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.03  E-value=0.015  Score=43.61  Aligned_cols=44  Identities=25%  Similarity=0.385  Sum_probs=35.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISS   59 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~   59 (214)
                      +|.|.|+ |-+|+.||..++..|++|.+.+++++.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4678888 9999999999999999999999998877766665543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.02  E-value=0.013  Score=41.39  Aligned_cols=91  Identities=16%  Similarity=0.222  Sum_probs=52.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCC-----CCCCceEEEeeCCCHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSS-----SANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .-++-|+|+ |-+|.++++.|.+.|+.|..+ .|+.+..+...+.+.....     .....+++-.-+.|. .+.++.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            345888888 789999999999999998766 4655555544444322110     011234555555554 78888888


Q ss_pred             HHHH--cCCccEEEeCCcccC
Q 044923           87 AVSQ--YGKLDIMFNNAGIVD  105 (214)
Q Consensus        87 ~~~~--~g~id~li~~ag~~~  105 (214)
                      +.+.  +.+=.+|+|+.|..+
T Consensus        88 La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--
T ss_pred             HHHhccCCCCcEEEECCCCCh
Confidence            8765  333359999999753

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.02  E-value=0.039  Score=46.79  Aligned_cols=44  Identities=23%  Similarity=0.302  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCCcchhhHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA---KVLIADIKDDLGESVCE   55 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~---~vi~~~r~~~~~~~~~~   55 (214)
                      .|.+++|.||+|++|...++.+...|+   +|+++++++++.+...+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~  221 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR  221 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence            468999999999999998886666554   68888888776654443

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.02  E-value=0.038  Score=42.08  Aligned_cols=36  Identities=25%  Similarity=0.421  Sum_probs=30.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++.+++|.|+++ +|.++++.|+..|.. +.+++.+
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            46778899997765 999999999999986 7777654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.96  E-value=0.015  Score=46.55  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=37.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHh
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDI   57 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~   57 (214)
                      +|+++|.|+ ||-+++++..|++.|+. |.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            578999986 99999999999999985 999999988777766543

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.96  E-value=0.34  Score=42.00  Aligned_cols=38  Identities=29%  Similarity=0.440  Sum_probs=32.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .+.+|.++|.| .||.|+++++.|.+.|+.|.+.+++..
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~   49 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNET   49 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChH
Confidence            46788899998 788999999999999999999887643

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.95  E-value=0.06  Score=39.58  Aligned_cols=88  Identities=19%  Similarity=0.209  Sum_probs=56.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC----CCCceEEEeeCCCHHHHHHHHHH--H
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS----ANGCSYVHCDVTKEKDIENAVNT--A   87 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~--~   87 (214)
                      +++-++|- |-+|..+|+.|+++|++|.+.+|++++.+++.+.-......    .....++..=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45677776 78999999999999999999999987776665442111000    01235666778888888888876  6


Q ss_pred             HHHcCCccEEEeCCc
Q 044923           88 VSQYGKLDIMFNNAG  102 (214)
Q Consensus        88 ~~~~g~id~li~~ag  102 (214)
                      .+...+=.++|....
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            655533345554443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.95  E-value=0.057  Score=44.97  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=32.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      .|++++|.|+ |+||..+++.+...|++|+++..+.++..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            6889999765 8999999998888899988877766544333

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.94  E-value=0.0091  Score=43.18  Aligned_cols=40  Identities=18%  Similarity=0.354  Sum_probs=32.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHh
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~   57 (214)
                      |+++|+++-+|++||..|.++|.+|+.+  +.+.-+.+..++
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~   40 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA   40 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence            5789999999999999999999999988  334444444444

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.91  E-value=0.064  Score=43.59  Aligned_cols=42  Identities=26%  Similarity=0.447  Sum_probs=35.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      .+++++|.|+++++|..+++.....|++|+++.+++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999998888999999988887654444

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.91  E-value=0.047  Score=46.93  Aligned_cols=40  Identities=23%  Similarity=0.427  Sum_probs=34.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      ..+.||+++|.|.+. ||+.+|+.|...|++|+++.+++..
T Consensus       250 ~~LaGKtVgVIG~G~-IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        250 VMIAGKTVVVCGYGD-VGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchh
Confidence            368999999999875 9999999999999999998776543

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.91  E-value=0.046  Score=44.36  Aligned_cols=42  Identities=19%  Similarity=0.262  Sum_probs=35.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      +|.+++|.|+++++|.++++.....|++++++.++.+..+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            578999999999999999998888999999888777654444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.89  E-value=0.054  Score=46.36  Aligned_cols=114  Identities=9%  Similarity=0.078  Sum_probs=67.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc---CC----eEEEEec--CCcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKH---GA----KVLIADI--KDDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~---g~----~vi~~~r--~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~   83 (214)
                      -.|+||||+|-||.++.-.++.-   |.    .+++++.  +.+.++...-++.+.... ...+.+. .  .+    .+.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~----~ea  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DL----DVA  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CC----HHH
Confidence            45999999999999999999984   42    2667777  566666666666554311 1112221 1  12    122


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC--CeEEEec
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR--GSIISTA  153 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~s  153 (214)
                             +.+.|++|..+|....     ...+.   .+.++.|.    .+++...+.+.+...  .+|+.+.
T Consensus       197 -------~~daDvvIitag~prk-----~G~~R---~DLL~~N~----~Ifk~~g~~I~~~a~~~~~VlVv~  249 (452)
T cd05295         197 -------FKDAHVIVLLDDFLIK-----EGEDL---EGCIRSRV----AICQLYGPLIEKNAKEDVKVIVAG  249 (452)
T ss_pred             -------hCCCCEEEECCCCCCC-----cCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCCeEEEEe
Confidence                   2388999999997422     12333   44566676    455555555554433  3444444

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.88  E-value=0.098  Score=43.16  Aligned_cols=105  Identities=13%  Similarity=0.174  Sum_probs=60.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHH---HhhccCCCCCCceEEEeeCCCHHHHHHHH-
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE---DISSSSSSANGCSYVHCDVTKEKDIENAV-   84 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~---~~~~~~~~~~~v~~~~~D~~~~~~~~~~~-   84 (214)
                      ..+.|+++.|.|. |-||+++|+.|...|++|+..+++.+.......   .+.+.. ...++.++.+-.+  ++...++ 
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell-~~aDiVil~lP~t--~~t~~li~  217 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAI-KDADIISLHVPAN--KESYHLFD  217 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHH-hcCCEEEEeCCCc--HHHHHHHh
Confidence            3689999999976 669999999999999999999987643221110   111110 1123444444443  3334444 


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhh
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV  125 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~  125 (214)
                      ++..+.. +-+.++-|+|...       -.+.+.+.+.++.
T Consensus       218 ~~~l~~m-k~gavlIN~aRG~-------~vd~~aL~~aL~~  250 (330)
T PRK12480        218 KAMFDHV-KKGAILVNAARGA-------VINTPDLIAAVND  250 (330)
T ss_pred             HHHHhcC-CCCcEEEEcCCcc-------ccCHHHHHHHHHc
Confidence            3333333 3466777777542       2245555555443

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.88  E-value=0.081  Score=36.82  Aligned_cols=74  Identities=16%  Similarity=0.282  Sum_probs=43.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEE-EEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKH-GAKVL-IADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g~~vi-~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|.||||-+|.++.+.|++. .+.++ +.+++.+....+.........   .......| .+.+.+           .
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~~~-----------~   65 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKG---FEDLSVED-ADPEEL-----------S   65 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTT---TEEEBEEE-TSGHHH-----------T
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccc---ccceeEee-cchhHh-----------h
Confidence            4789999999999999999985 34544 455555355444444331111   01111122 333332           3


Q ss_pred             CccEEEeCCcc
Q 044923           93 KLDIMFNNAGI  103 (214)
Q Consensus        93 ~id~li~~ag~  103 (214)
                      ++|++|.+.+.
T Consensus        66 ~~Dvvf~a~~~   76 (121)
T PF01118_consen   66 DVDVVFLALPH   76 (121)
T ss_dssp             TESEEEE-SCH
T ss_pred             cCCEEEecCch
Confidence            88999999773

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.83  E-value=0.054  Score=44.11  Aligned_cols=43  Identities=28%  Similarity=0.383  Sum_probs=35.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      .++.+++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            4678999999999999999988888899999888876554433

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.79  E-value=0.028  Score=45.10  Aligned_cols=37  Identities=30%  Similarity=0.454  Sum_probs=33.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI   45 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r   45 (214)
                      -+++||.++|.|.|.-+|+-+|..|.++|+.|.++..
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs  189 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI  189 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC
Confidence            3689999999999999999999999999999888743

>PRK14851 hypothetical protein; Provisional

Probab=95.78  E-value=0.069  Score=48.22  Aligned_cols=83  Identities=16%  Similarity=0.224  Sum_probs=51.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC-------------------cchhhHHHHhhccCCCCCCceE
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKD-------------------DLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      .+++++|+|.| -||+|..++..|+..|.. +.+++.+.                   .+.+...+.+.+.. +..++..
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in-P~~~I~~  117 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN-PFLEITP  117 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC-CCCeEEE
Confidence            57889999998 579999999999999975 66665421                   12222333333322 2345666


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      +...++ ++.+.++++       ++|+||.+.-
T Consensus       118 ~~~~i~-~~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        118 FPAGIN-ADNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             EecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence            666665 344555544       5677775544

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.76  E-value=0.078  Score=43.12  Aligned_cols=43  Identities=30%  Similarity=0.451  Sum_probs=35.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      -+|.+++|.|+++++|..+++.+...|++++++.++.++.+.+
T Consensus       139 ~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        139 KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999988887776554433

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.74  E-value=0.05  Score=43.73  Aligned_cols=42  Identities=29%  Similarity=0.427  Sum_probs=35.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES   52 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~   52 (214)
                      .++++++|+|+++++|..+++.+...|++|+.+.++.+..+.
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            367899999999999999999999999999988887655433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.71  E-value=0.092  Score=44.05  Aligned_cols=37  Identities=22%  Similarity=0.345  Sum_probs=31.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      .|++++|.|+ +++|...++.....|++|+++.++.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            5889999886 899999999888889998888776543

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.71  E-value=0.086  Score=43.20  Aligned_cols=38  Identities=16%  Similarity=0.233  Sum_probs=33.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      -+|++++|.|+++++|.++++.+...|++++++.++.+
T Consensus       145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            36899999999999999999999999999888877654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.67  E-value=0.079  Score=42.89  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=35.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES   52 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~   52 (214)
                      ..|.+++|.|+++++|.++++.+...|++++++.++.++.+.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  178 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE  178 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence            467899999999999999999999999999988887765433

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.66  E-value=0.025  Score=47.54  Aligned_cols=39  Identities=21%  Similarity=0.405  Sum_probs=32.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcch
Q 044923           12 QGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLG   50 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~   50 (214)
                      ..+++.|.||||.+|.++.+.|.++ +.+|.++.++....
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG   76 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG   76 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence            3468999999999999999999998 67788777655444

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.66  E-value=0.13  Score=42.47  Aligned_cols=39  Identities=28%  Similarity=0.327  Sum_probs=34.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999998 89999999999999999998888653

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.65  E-value=0.34  Score=39.39  Aligned_cols=112  Identities=16%  Similarity=0.206  Sum_probs=69.6

Q ss_pred             EecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           18 ITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        18 ItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      |+|+ |.+|..+|..|+..+.  .+++.+.+++.++....++.+..... ..+.+.   ..+.+           .+.+.
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~-----------~~~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYS-----------DCKDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHH-----------HHCCC
Confidence            3554 8999999999998875  49999998888877777776543211 112221   12322           22378


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVC  156 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~  156 (214)
                      |++|..||....     ..++.   ...++.|.    .+.+.+.+.+.+. ..+.++++|...
T Consensus        66 DivVitag~~rk-----~g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~  116 (299)
T TIGR01771        66 DLVVITAGAPQK-----PGETR---LELVGRNV----RIMKSIVPEVVKSGFDGIFLVATNPV  116 (299)
T ss_pred             CEEEECCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            999999997422     12344   34566666    4455555555444 356777777543

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.64  E-value=0.033  Score=44.76  Aligned_cols=38  Identities=32%  Similarity=0.446  Sum_probs=34.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +++||+++|.|.|.-+|+-++..|.++|++|.++.++.
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            68999999999999999999999999999998775443

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.64  E-value=0.14  Score=42.00  Aligned_cols=35  Identities=37%  Similarity=0.565  Sum_probs=31.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      .|.+++|+|+++++|.++++.....|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            48999999999999999999888899998877654

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.61  E-value=0.068  Score=42.84  Aligned_cols=42  Identities=21%  Similarity=0.282  Sum_probs=35.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES   52 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~   52 (214)
                      .+|++++|.|+++++|.++++.....|++|+.+.+++++.+.
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            368999999999999999999888899999888877655443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.60  E-value=0.17  Score=42.55  Aligned_cols=73  Identities=12%  Similarity=0.177  Sum_probs=50.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +.|+++|+|++ ..|+.+++.+.+.|+++++++.++......   ..       + ..+..|..|.+.+.+++++.    
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a-------d-~~~~~~~~d~~~l~~~~~~~----   74 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA-------H-RSHVIDMLDGDALRAVIERE----   74 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh-------h-heEECCCCCHHHHHHHHHHh----
Confidence            45789999876 589999999999999999988776432111   11       0 23566778887776666532    


Q ss_pred             CCccEEEeCC
Q 044923           92 GKLDIMFNNA  101 (214)
Q Consensus        92 g~id~li~~a  101 (214)
                       .+|.++...
T Consensus        75 -~id~vi~~~   83 (395)
T PRK09288         75 -KPDYIVPEI   83 (395)
T ss_pred             -CCCEEEEee
Confidence             688887643

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.58  E-value=0.086  Score=43.91  Aligned_cols=42  Identities=26%  Similarity=0.298  Sum_probs=33.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~   53 (214)
                      .+|.+++|.|+ +++|...++.....|+ +|+.+.+++++.+..
T Consensus       183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            45889999974 9999999998888898 688888876654433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.54  E-value=0.1  Score=43.99  Aligned_cols=41  Identities=27%  Similarity=0.356  Sum_probs=34.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      -+|.+++|.|+++++|..+++.+...|++++++.++.++.+
T Consensus       188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            35789999999999999999888888999888777665443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK07411 hypothetical protein; Validated

Probab=95.54  E-value=0.1  Score=44.10  Aligned_cols=35  Identities=26%  Similarity=0.394  Sum_probs=29.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEec
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADI   45 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r   45 (214)
                      .+++.+|+|.|+ ||+|..+++.|+..|.. +.+++.
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~   70 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDF   70 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence            467888999976 59999999999999975 667655

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.53  E-value=0.042  Score=44.13  Aligned_cols=40  Identities=15%  Similarity=0.152  Sum_probs=35.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      -+++||.++|+|-|.-+|+-++..|.++|+.|.++.++..
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            3688999999999999999999999999999998876543

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.52  E-value=0.072  Score=44.23  Aligned_cols=41  Identities=27%  Similarity=0.390  Sum_probs=32.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESV   53 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~   53 (214)
                      .|++++|.|+ +++|...++.....|++ |+.+.+++++.+..
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5899999985 99999998888888985 88888877654443

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.51  E-value=0.032  Score=36.91  Aligned_cols=37  Identities=24%  Similarity=0.440  Sum_probs=31.3

Q ss_pred             CCChHHHHHHHHHHHcC---CeEEEE-ecCCcchhhHHHHh
Q 044923           21 GAGSIGECAARLFSKHG---AKVLIA-DIKDDLGESVCEDI   57 (214)
Q Consensus        21 as~gIG~~ia~~L~~~g---~~vi~~-~r~~~~~~~~~~~~   57 (214)
                      |+|.+|.++++.|.+.|   .+|.+. .|++++.+++.++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            88999999999999999   888855 88888777766654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02827 Alcohol dehydrogenase-like

Probab=95.48  E-value=0.099  Score=43.87  Aligned_cols=80  Identities=20%  Similarity=0.299  Sum_probs=48.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      .+|++++|.|+ |+||..+++.....|+. |+++.+++++.+.. +++.        ... ..|..+. ++..+.+.++.
T Consensus       192 ~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lG--------a~~-~i~~~~~~~~~~~~v~~~~  260 (378)
T PLN02827        192 SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFG--------VTD-FINPNDLSEPIQQVIKRMT  260 (378)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC--------CcE-EEcccccchHHHHHHHHHh
Confidence            35899999985 89999999888888986 66666666544332 2221        111 1233321 23333333332


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       261 ~--~g~d~vid~~G~  273 (378)
T PLN02827        261 G--GGADYSFECVGD  273 (378)
T ss_pred             C--CCCCEEEECCCC
Confidence            2  369999999884

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.48  E-value=0.087  Score=42.97  Aligned_cols=40  Identities=23%  Similarity=0.301  Sum_probs=30.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      ++++++||++++|...++.....|++|+.+.+++++.+..
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~  184 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL  184 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4455559999999999887777899999888877654444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.48  E-value=0.077  Score=44.30  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=48.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|++++|.|+ ++||...++.+...|+ +|+++.+++++.+.. +++.        .. ...|..+++..    +++.+.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~G--------a~-~~i~~~~~~~~----~~i~~~  255 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELG--------AT-ATVNAGDPNAV----EQVREL  255 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcC--------Cc-eEeCCCchhHH----HHHHHH
Confidence            5789999985 8999999888888899 588888877655433 2221        11 11233332222    222222


Q ss_pred             c-CCccEEEeCCcc
Q 044923           91 Y-GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~-g~id~li~~ag~  103 (214)
                      . +.+|++|.+.|.
T Consensus       256 ~~~g~d~vid~~G~  269 (371)
T cd08281         256 TGGGVDYAFEMAGS  269 (371)
T ss_pred             hCCCCCEEEECCCC
Confidence            2 369999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.48  E-value=0.31  Score=36.68  Aligned_cols=95  Identities=24%  Similarity=0.273  Sum_probs=66.2

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ..+++||+|+=.|++.|+   ++...+-.|+ .|+.+..+++.++-..+...+..   .++.++.+|+++..        
T Consensus        41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~---g~v~f~~~dv~~~~--------  106 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELL---GDVEFVVADVSDFR--------  106 (198)
T ss_pred             cCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhC---CceEEEEcchhhcC--------
Confidence            457899999999998886   2333334475 48888888888877777666532   36899999998744        


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhh
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV  125 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~  125 (214)
                           +++|.+|.|-.+....    ...+..-+++.+++
T Consensus       107 -----~~~dtvimNPPFG~~~----rhaDr~Fl~~Ale~  136 (198)
T COG2263         107 -----GKFDTVIMNPPFGSQR----RHADRPFLLKALEI  136 (198)
T ss_pred             -----CccceEEECCCCcccc----ccCCHHHHHHHHHh
Confidence                 5789999998876542    22445445555444

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.47  E-value=0.6  Score=40.71  Aligned_cols=40  Identities=28%  Similarity=0.520  Sum_probs=33.0

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ...+.|++++|.|. |..|.+.++.|.+.|++|++.+++++
T Consensus         7 ~~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~   46 (488)
T PRK03369          7 DPLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPD   46 (488)
T ss_pred             ccccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            34467899999995 57999999999999999999886543

>PLN03139 formate dehydrogenase; Provisional

Probab=95.43  E-value=0.25  Score=41.67  Aligned_cols=38  Identities=26%  Similarity=0.327  Sum_probs=33.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .++.||++.|.| .|-||+.+|+.|..-|++|+..+|+.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            468999999999 57799999999999999998888764

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.044  Score=43.93  Aligned_cols=38  Identities=26%  Similarity=0.322  Sum_probs=33.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      -+++||.++|.|.|.-+|+-++..|.++|+.|.++...
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~  190 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF  190 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence            36899999999999999999999999999998876443

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.41  E-value=0.11  Score=43.41  Aligned_cols=42  Identities=24%  Similarity=0.342  Sum_probs=33.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~   53 (214)
                      -+|.+++|.| .+++|..+++.+...|+ +|+++.++.++.+..
T Consensus       189 ~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         189 TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            3578999996 58999999999999998 799888877655444

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.40  E-value=0.11  Score=40.63  Aligned_cols=30  Identities=27%  Similarity=0.433  Sum_probs=24.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      ++|.| .||+|.++++.|+..|.. +.+++.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56776 679999999999999975 7777664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.35  E-value=0.062  Score=43.88  Aligned_cols=43  Identities=28%  Similarity=0.451  Sum_probs=36.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      ..+.+++|.|+++.+|..+++.+...|++++.+.++.++.+..
T Consensus       161 ~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999999999999999888877665444

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.35  E-value=0.085  Score=43.14  Aligned_cols=37  Identities=32%  Similarity=0.419  Sum_probs=33.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      ..+.||++.|.|- |.||+++|+.+..-|++|+..+|.
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~  177 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTS  177 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCC
Confidence            3689999999986 889999999999889999988875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		9e-49
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-38
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		1e-35
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-33
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-26
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-26
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-25
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-25
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-24
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		3e-23
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		3e-23
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-23
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		5e-23
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		7e-23
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-22
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-22
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-22
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-22
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		6e-22
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		6e-22
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		6e-22
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		8e-22
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-21
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-21
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		2e-21
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-21
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-21
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-21
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-21
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-21
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-21
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-21
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-21
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		3e-21
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-21
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-21
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-21
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-21
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		9e-21
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-20
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-20
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-20
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-20
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-20
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-20
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-20
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-20
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		3e-20
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-20
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-20
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		6e-20
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		6e-20
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		7e-20
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		7e-20
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		7e-20
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		7e-20
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-20
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		7e-20
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		8e-20
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		9e-20
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		9e-20
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-19
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-19
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-19
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-19
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-19
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-19
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-19
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-19
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-19
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-19
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-19
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-18
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-18
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		3e-18
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		3e-18
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		3e-18
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		4e-18
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-18
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		6e-18
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		7e-18
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-17
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		1e-17
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-17
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-17
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-17
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-17
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		1e-17
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-17
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-17
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-17
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-17
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-17
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-17
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-17
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-17
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		5e-17
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		7e-17
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-17
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-16
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-16
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		2e-16
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-16
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-16
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		4e-16
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		4e-16
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		4e-16
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		4e-16
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		4e-16
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		6e-16
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-16
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		7e-16
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		9e-16
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-15
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-15
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-15
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		3e-15
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		6e-15
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		6e-15
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		7e-15
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		8e-15
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-14
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-14
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-14
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-14
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-14
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-14
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-14
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-14
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-14
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-14
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		5e-14
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		6e-14
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-14
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-14
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		6e-14
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		7e-14
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-14
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		9e-14
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		1e-13
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-13
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-13
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-13
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		2e-13
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-13
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		5e-13
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		5e-13
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		6e-13
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		6e-13
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		7e-13
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		8e-13
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		8e-13
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		9e-13
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-13
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-12
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-12
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-12
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-12
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-12
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-12
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		4e-12
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-12
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		5e-12
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		7e-12
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		7e-12
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		8e-12
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-12
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-11
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		2e-11
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		2e-11
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-11
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		5e-11
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-11
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		8e-11
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		1e-10
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-10
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-10
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		2e-10
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		2e-10
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-10
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-10
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-10
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-10
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		4e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		5e-10
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		6e-10
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		7e-10
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		8e-10
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		1e-09
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		1e-09
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-09
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-09
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-09
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		5e-09
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		5e-09
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		5e-09
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		5e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		8e-09
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		9e-09
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		9e-09
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		1e-08
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		2e-08
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-08
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-08
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		2e-08
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		3e-08
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-08
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		3e-08
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		3e-08
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		4e-08
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		4e-08
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-08
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-08
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-08
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		6e-08
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		6e-08
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		7e-08
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		7e-08
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		8e-08
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-07
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-07
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		5e-07
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		5e-07
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-06
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		3e-06
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-06
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		4e-06
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		4e-06
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		1e-05
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		2e-05
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		5e-05
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		1e-04
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		1e-04
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-04
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		2e-04
2z5l_A	511	The First Ketoreductase Of The Tylosin Pks Length =		2e-04
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		3e-04
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		5e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		7e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		7e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		7e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		7e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		7e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		7e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		7e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		8e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		8e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  189 bits (480), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 105/209 (50%), Positives = 145/209 (69%), Gaps = 5/209 (2%)
Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXA 64
           +S + RLQ KVA+ITGGAG IGE  A+LF ++GAKV+IADI DD G+ VC +I       
Sbjct: 8   DSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----P 63
Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
           +  S+VHCDVTK++D+ N V+T ++++GKLDIMF N G++     +IL+    +F+R++ 
Sbjct: 64  DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMD 123
Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYTSSKHGVVGLMKNTAV 183
           +N+ GAFL  KHAARVM PA +GSI+ TAS+     G   SH YT++KH V+GL  +   
Sbjct: 124 INVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCT 183
Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLKLD 212
           ELG +GIRVNCVSPY V+SP+      +D
Sbjct: 184 ELGEYGIRVNCVSPYIVASPLLTDVFGVD 212

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  153 bits (386), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/198 (44%), Positives = 121/198 (61%), Gaps = 8/198 (4%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           MS RL GKVAL++GGA  +G    R     GAKV+  DI D+ G+++          A+ 
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA------ELADA 54
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             YVH DVT+    + AV+TAV+ +G L ++ NNAGI++     I D    E++RIL VN
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVN 112
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G FLG +   + MK AGRGSII+ +S+ G+ G V  H YT++K  V GL K+TA+ELG
Sbjct: 113 LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172
Query: 187 RFGIRVNCVSPYAVSSPM 204
             GIRVN + P  V +PM
Sbjct: 173 PSGIRVNSIHPGLVKTPM 190

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 8/197 (4%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           MS RL GKVAL++GGA   G    R     GAKV+  DI D+ G++           A+ 
Sbjct: 1   MSGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAA------ELADA 54
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             YVH DVT+    + AV+TAV+ +G L ++ NNAGI++     I D    E++RIL VN
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVN 112
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G FLG +   +  K AGRGSII+ +S+ G+ G V  H YT++K  V GL K+TA+ELG
Sbjct: 113 LTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172
Query: 187 RFGIRVNCVSPYAVSSP 203
             GIRVN + P  V +P
Sbjct: 173 PSGIRVNSIHPGLVKTP 189

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 122/214 (57%), Gaps = 4/214 (1%)
Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXX 60
           M   +S + R   +V LITGG   +G   A   +  GAK+ + D+  +  E+    +   
Sbjct: 1   MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET 60
Query: 61  XXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEF 119
              A   + V  DV+ E  +E  V     ++G++D  FNNAGI  E K N  ++   AEF
Sbjct: 61  APDAEVLTTV-ADVSDEAQVEAYVTATTERFGRIDGFFNNAGI--EGKQNPTESFTAAEF 117
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           ++++S+NL G FLG +   ++M+  G G +++TASV G+ G      Y ++KHGVVGL +
Sbjct: 118 DKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTR 177
Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           N+AVE GR+GIR+N ++P A+ +PM +  +K  D
Sbjct: 178 NSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD 211

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GK  +ITGGA  +G  AAR     GA+V++AD+ D+ G +   ++       +   Y 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQ 56
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVG 129
           H DVT E+D +  V  A  ++G +D + NNAGI   +    L+ +  E F +++ +NL G
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI---STGMFLETESVERFRKVVEINLTG 113
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F+G K     MK AG GSI++ +S  G++G   + +Y +SK GV GL K  AVELG   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173
Query: 190 IRVNCVSPYAVSSPM 204
           IRVN V P    +PM
Sbjct: 174 IRVNSVHPGMTYTPM 188

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GK  +ITGGA  +G  AAR     GA+V++AD+ D+ G +   ++       +   Y 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------GDAARYQ 56
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVG 129
           H DVT E+D +  V  A  ++G +D + NNAGI   +    L+ +  E F +++ +NL G
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGI---STGMFLETESVERFRKVVEINLTG 113
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F+G K     MK AG GSI++ +S  G++G   + +Y +SK GV GL K  AVELG   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173
Query: 190 IRVNCVSPYAVSSPM 204
           IRVN V P    +PM
Sbjct: 174 IRVNSVHPGMTYTPM 188

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           MS +  GKV L+TG  G+IG   A   ++ G  + + D+  +  E     +      A  
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEAR- 59
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
            SYV CDVT E+ +   V++ V  +GK+D +FNNAG      P + D    +F R+L++N
Sbjct: 60  -SYV-CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTIN 116
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + GAF   K  +R M     G I++TAS+ GV G     AY +SK  ++ L +  A++L 
Sbjct: 117 VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176
Query: 187 RFGIRVNCVSPYAVSSPMAKGFL 209
            + IRVN +SP      M  GF+
Sbjct: 177 PYNIRVNAISP----GYMGPGFM 195

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+ KV ++TG    IG   A+ F+ + + V+  ++ +D    + +++        G   V
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG---V 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV+K+KD+E  V      Y ++D++ NNAGI+D   P    +D+  +ER+L+VNL  A
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDEL-WERVLAVNLYSA 120
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  ++    +M   G+G I++TAS+ G+ GG     YT +KHG++GL ++ A   G  GI
Sbjct: 121 FYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGI 180
Query: 191 RVNCVSPYAVSSPMAKG 207
           R   V P  V + +  G
Sbjct: 181 RAVAVLPGTVKTNIGLG 197

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
            S  L  +V ++TGG   IG   A LF+K+GA V++AD+ +D    V  +I         
Sbjct: 21  QSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG--- 77
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DV+  KD E+ V    +++G++D++ NNAG       N++   +  ++RI SVN
Sbjct: 78  ---VRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGF--GTTGNVVTIPEETWDRIXSVN 132
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G FL +K+   V +  G GSII+T S           AY +SK  +  L +  A +  
Sbjct: 133 VKGIFLCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHA 192
Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKL 211
           + GIRVN V+P  + SP    F K+
Sbjct: 193 KEGIRVNAVAPGTIDSPY---FTKI 214

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++G VA+ITGGA  +G   A      GA  ++ D+ +  GE+  + +       N C + 
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFA 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVN 126
             DVT EKD++ A+  A  ++G++D+  N AGI   +K   L   Q     +F+R+L VN
Sbjct: 62  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 121
Query: 127 LVGAFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           L+G F   +  A  M      +   RG II+TASV    G V   AY++SK G+VG+   
Sbjct: 122 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +L   GIRV  ++P    +P+
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPL 205

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++G VA+ITGGA  +G   A      GA  ++ D+ +  GE+  + +       N C + 
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFA 63
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVN 126
             DVT EKD++ A+  A  ++G++D+  N AGI   +K   L   Q     +F+R+L VN
Sbjct: 64  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 123
Query: 127 LVGAFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           L+G F   +  A  M      +   RG II+TASV    G V   AY++SK G+VG+   
Sbjct: 124 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 183
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +L   GIRV  ++P    +P+
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPL 207

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++G VA+ITGGA  +G   A      GA  ++ D+ +  GE+  + +       N C + 
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFA 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVN 126
             DVT EKD++ A+  A  ++G++D+  N AGI   +K   L   Q     +F+R+L VN
Sbjct: 62  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 121
Query: 127 LVGAFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           L+G F   +  A  M      +   RG II+TASV    G V   AY++SK G+VG+   
Sbjct: 122 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +L   GIRV  ++P    +P+
Sbjct: 182 IARDLAPIGIRVMTIAPGLFGTPL 205

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  103 bits (258), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 12/207 (5%)
Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           P L GKVA++TG    IG   AR  +  G  VL ADI  D  ++    I        GC 
Sbjct: 25  PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--------GCG 76
Query: 69  YVHC--DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              C  DV+ E+ I   V+  V+ +G +D +  NAG+V  A  +++D    +F+R++++N
Sbjct: 77  AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA--SLIDTTVEDFDRVIAIN 134
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L GA+L TKHAA  M   G G+I++ +S+ G +    + AY  SK G++ L + TA EL 
Sbjct: 135 LRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194
Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDD 213
             GIR N + P  V +PM +  + + D
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQTAMAMFD 221

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  103 bits (257), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 6/195 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GKVAL+TG +  IG   A   +K GA V++    ++  +   E +       +    V
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE--QKANEVVDEIKKLGSDAIAV 59
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
             DV   +D+ N V   V  +G++DI+ NNAG+    K N+L    + E++ +++ NL G
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV---TKDNLLMRMKEEEWDTVINTNLKG 116
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FL TK  +R M     G I++ ASV GV G      Y ++K GV+GL K +A EL    
Sbjct: 117 VFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRN 176
Query: 190 IRVNCVSPYAVSSPM 204
           I VN ++P  +++ M
Sbjct: 177 ITVNAIAPGFIATDM 191

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHC 72
           GK  L+TGGA  IG   A+ F++ GA V + D++ + G+ V E I        G ++   
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAI--------GGAFFQV 56
Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+  E++    V  A    G++D++ NNA I   A  + L     E+ R+L VNL     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMH 114
Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            +  AAR M+  G G+I++ ASV G+     + AY +SK G+V L ++ A++L    IRV
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174
Query: 193 NCVSPYAVSS 202
           N V+P A+++
Sbjct: 175 NAVAPGAIAT 184

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GKVA++TG    IG   A   +  GA +++    D    +  E +       +G   +
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD---AAEIEKVRAGLAAQHGVKVL 58
Query: 71  H--CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           +   D++K + +   V+ AV Q G++DI+ NNAGI   A   I D    +++ IL++NL 
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLS 116
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             F GT  A   MK  G G II+ AS  G++      AY ++KHGVVG  K TA+E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 189 GIRVNCVSPYAVSSPM 204
           GI  N + P  V SP+
Sbjct: 177 GITANAICPGWVRSPL 192

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score =  100 bits (250), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 16/204 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++G VA+ITGGA  +G   A+     GA  ++ D+ +  GE+  + +         C + 
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL------GGNCIFA 60
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVN 126
             +VT EK+++ A+  A  ++G++D+  N AGI    K      +Q     +F+R+++VN
Sbjct: 61  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 120
Query: 127 LVGAFLGTKHAARVM---KP---AGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           L+G F   +  A VM   +P     RG II+TASV    G V   AY++SK G+VG+   
Sbjct: 121 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 180
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +L   GIRV  ++P   ++P+
Sbjct: 181 IARDLAPIGIRVVTIAPGLFATPL 204

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score =  100 bits (250), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 16/204 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++G VA+ITGGA  +G   A+     GA  ++ D+ +  GE+  + +         C + 
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL------GGNCIFA 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVN 126
             +VT EK+++ A+  A  ++G++D+  N AGI    K      +Q     +F+R+++VN
Sbjct: 62  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 121
Query: 127 LVGAFLGTKHAARVM---KP---AGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           L+G F   +  A VM   +P     RG II+TASV    G V   AY++SK G+VG+   
Sbjct: 122 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +L   GIRV  ++P   ++P+
Sbjct: 182 IARDLAPIGIRVVTIAPGLFATPL 205

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GKVA++TG    IG   A   +  GA +++    D    +  E +       +G   +
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD---AAEIEKVRAGLAAQHGVKVL 58
Query: 71  H--CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           +   D++K + +   V+ AV Q G++DI+ NNAGI   A   I D    +++ IL++NL 
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLS 116
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             F GT  A   MK  G G II+ AS  G++      AY ++KHGVVG  K TA+E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 189 GIRVNCVSPYAVSSPM 204
           GI  N + P  V +P+
Sbjct: 177 GITANAICPGWVRTPL 192

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 16/204 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++G VA+ITGGA  +G   A+     GA  ++ D+ +  GE+  + +         C + 
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKL------GGNCIFA 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA----EFERILSVN 126
             +VT EK+++ A+  A  ++G++D+  N AGI    K      +Q     +F+R+++VN
Sbjct: 62  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVN 121
Query: 127 LVGAFLGTKHAARVM---KP---AGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           L+G F   +  A VM   +P     RG II+TASV    G V   AY++SK G+VG+   
Sbjct: 122 LIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 181
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +L   GIRV  ++P   ++P+
Sbjct: 182 IARDLAPIGIRVVTIAPGLFATPL 205

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score =  100 bits (249), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GKVA++TG    IG   A   +  GA +++    D    +  E +       +G   +
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD---AAEIEKVRAGLAAQHGVKVL 58
Query: 71  H--CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           +   D++K + +   V+ AV Q G++DI+ NNAGI   A   I D    +++ IL++NL 
Sbjct: 59  YDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLS 116
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             F GT  A   MK  G G II+ AS  G++      AY ++KHGVVG  K TA+E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 189 GIRVNCVSPYAVSSPM 204
           GI  N + P  V +P+
Sbjct: 177 GITANAICPGWVRAPL 192

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  100 bits (248), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 112/200 (56%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXAN 65
           M   L+GKV +ITG +  +G+  A  F+   AKV++    K+D   SV E+I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N V +A+ ++GKLD+M NNAG+ +    +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDT 115
Query: 126 NLVGAFLGTKHAAR-VMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +  ++   +G++I+ +SV   I       Y +SK G+  + K  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALE 175
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 176 YAPKGIRVNNIGPGAINTPI 195

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXAN 65
           M   L+GKV +ITG +  +G+  A  F+   AKV++    K+D   SV E+I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N V +A+ ++GKLD+M NNAG+ +    +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSH--EMSLSDWNKVIDT 115
Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +       +G++I+ +SV   I       Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 176 YAPKGIRVNNIGPGAINTPI 195

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL+GK+A++TG +  IG  AA LF++ GAKV++       G ++ E            + 
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN---GNALAELTDEIAGGGGEAAA 61
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DV  E   E  V  AV ++G LD  FNNAG +  A   I       +   L  NL  
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALG-AMGEISSLSVEGWRETLDTNLTS 120
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELGRF 188
           AFL  K+    +   G GS+  T+S  G   G    A Y +SK G++GL++  AVELG  
Sbjct: 121 AFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR 180
Query: 189 GIRVNCVSPYAVSSP 203
           GIRVN + P    +P
Sbjct: 181 GIRVNALLPGGTDTP 195

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 106/214 (49%), Gaps = 17/214 (7%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI---------KDDLGESVCED 56
           SM+ R++GKVA +TG A   G   A   ++ GA ++  DI            +  S  ED
Sbjct: 4   SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPED 63
Query: 57  IXXXXXXANGCSY----VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL 112
           +        G +        DV     ++ AV++ V Q G+LDI+  NAGI +    + L
Sbjct: 64  LAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG--DTL 121
Query: 113 DNDQAE-FERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSS 170
           D    E +  ++ +NL G +   K     M   GRG SII T+SV G+     +  Y ++
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAA 181
Query: 171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           KHGVVGLM+   VELG+  IRVN V P  V +PM
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S RL GKVA+ITGG   IG   A  F + GAKV+I D   D+GE   + +       +  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV----GTPDQI 56
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            +   D + E       +     +G +  + NNAGI      ++ +   AE+ ++L+VNL
Sbjct: 57  QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNL 114
Query: 128 VGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE-- 184
            G F GT+   + MK  G G SII+ +S+ G +G  +  AY +SK  V  + K+ A++  
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           L  + +RVN V P  + +P+
Sbjct: 175 LKDYDVRVNTVHPGYIKTPL 194

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M   L+ KV +ITGG+  +G   A  F +  AKV+I    +   E    D       A G
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNN---EEEALDAKKEVEEAGG 65
Query: 67  CSY-VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
            +  V  DVTKE+D+ N V TA+ ++G LD+M NNAG+ +    + L  D   + +++  
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDT 123
Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +       +G++I+ +SV  +I       Y +SK G+  + +  A+E
Sbjct: 124 NLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALE 183
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 184 YAPKGIRVNNIGPGAMNTPI 203

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 23/217 (10%)
Query: 2   LQANSMSPR----LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL------GE 51
           L+A +  P     + G+V ++TG  G IG   A  F+  GA+V++ DI   L      G 
Sbjct: 12  LEAQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGG 71
Query: 52  SVCEDIXXXXXXANGCSYVHCDVTKEKDIENA---VNTAVSQYGKLDIMFNNAGIVDEAK 108
           S  + +      A G +    D +   D + A   + TAV  +G LD++ NNAGIV +  
Sbjct: 72  SAAQSVVDEITAAGGEAV--ADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRM 129
Query: 109 PNILDNDQAEFERILSVNLVGAFLGTKHAA---RVMKPAGR---GSIISTASVCGVIGGV 162
             I +  + EF+ +++V+L G F   +HAA   R +  AG+   G II+T+S  G+ G V
Sbjct: 130 --IANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV 187
Query: 163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYA 199
               Y+++K G+  L    A E+GR+G+ VN ++P A
Sbjct: 188 GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSA 224

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXAN 65
           M   L+GKV +ITG +  +G+  A  F+   AKV++    K+D   SV E+I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N V +A+ ++GKLD+M NNAG+ +    +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDT 115
Query: 126 NLVGAFLGTKHAAR-VMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +  ++   +G++I+ +SV   I       Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 176 YAPKGIRVNNIGPGAINTPI 195

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 112/200 (56%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXAN 65
           M   L+GKV +ITG +  +G+  A  F+   AKV++    K+D   SV E+I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N V +A+ ++GKLD+M NNAG+ +    +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH--EMSLSDWNKVIDT 115
Query: 126 NLVGAFLGTKHAAR-VMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +  ++   +G++I+ +SV   I       Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 176 YAPKGIRVNNIGPGAINTPI 195

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M   L+ KV +ITGG+  +G   A  F +  AKV+I    +   E    D       A G
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNN---EEEALDAKKEVEEAGG 65
Query: 67  CSY-VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
            +  V  DVTKE+D+ N V TA+ ++G LD+M NNAG+ +    + L  D   + +++  
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDT 123
Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +       +G++I+ +SV  +I       Y +SK G+  + +  A+E
Sbjct: 124 NLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALE 183
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 184 YAPKGIRVNNIGPGAMNTPI 203

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 98/190 (51%), Gaps = 8/190 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GK ALITG +  IG+  A  +++ GA+V +A    D  + V ++I      A     +
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP---I 86
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDVT+   +   ++    + G +DI   NAGIV      +LD    EF+RI   N+ G 
Sbjct: 87  RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNVTGV 144
Query: 131 FLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHA--YTSSKHGVVGLMKNTAVELGR 187
           FL  + AAR M   G  G+II+TAS+ G I  +      Y +SK  VV L K  AVEL  
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAP 204
Query: 188 FGIRVNCVSP 197
             IRVN VSP
Sbjct: 205 HQIRVNSVSP 214

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 7/200 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M   L+ KV +ITGG+  +G   A  F +  AKV+I    +   E    D       A G
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNN---EEEALDAKKEVEEAGG 65
Query: 67  CSY-VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
            +  V  DVTKE+D+ N V TA+ ++G LD+M NNAG+ +    + L  D   + +++  
Sbjct: 66  QAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDT 123
Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +       +G++I+ +SV  +I       Y +SK G+  + +  A+E
Sbjct: 124 NLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALE 183
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 184 YAPKGIRVNNIGPGAMNTPI 203

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL+ K  LITG A  IG     LF+K GA+++  DI++       E +        G   
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHP 53
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLV 128
           V  DV     +E     A++  G+LD + + AGI    + N       E +E +L VNL 
Sbjct: 54  VVXDVADPASVERGFAEALAHLGRLDGVVHYAGIT---RDNFHWKXPLEDWELVLRVNLT 110
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G+FL  K A+   +    GSI+ TAS    +G +    Y +S  GVVGL +  A+ELGR+
Sbjct: 111 GSFLVAKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRW 169
Query: 189 GIRVNCVSP 197
           GIRVN ++P
Sbjct: 170 GIRVNTLAP 178

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 31/219 (14%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-------------KDDLGES 52
           SM+ +++GKVA ITG A   G   A   ++ GA ++  D+              DDL E+
Sbjct: 21  SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAET 80
Query: 53  VCEDIXXXXXXANGCSYV--HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN 110
           V +        A G   +    DV     ++ AV+  V+Q G+LDI+  NA +  E    
Sbjct: 81  VRQ------VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT-R 133
Query: 111 ILDNDQAEFERILSVNLVGAFLGTKHAARVMKP---AGR--GSIISTASVCGVIGGVTSH 165
           +   D   +  ++ VNL GA++     ARV  P   AG+  GSI+ T+S+ G+ G     
Sbjct: 134 LNRMDPKTWRDMIDVNLNGAWI----TARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIG 189
Query: 166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
            Y +SKHG+ GLM+  A+ELG   IRVN V P +V++PM
Sbjct: 190 NYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 101/185 (54%), Gaps = 11/185 (5%)
Query: 31  RLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQ 90
           R F   GA+V+I D  +  G ++ +++        G  ++ CDVT+E D++  V+  + +
Sbjct: 27  RAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETIRR 79
Query: 91  YGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFLGTKHAARVMKPAGRGSI 149
           +G+LD + NNAG      P   +   A+ F ++L +NL+G +  TK A   ++   +G++
Sbjct: 80  FGRLDCVVNNAG--HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNV 136
Query: 150 ISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
           I+ +S+ G IG   +  Y ++K  V  + K  A++   +G+RVNC+SP  + +P+ +   
Sbjct: 137 INISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA 196
Query: 210 KLDDD 214
            L  D
Sbjct: 197 ALMPD 201

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 97.4 bits (241), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           +L+GK A++TG +  +G+  A      GA +++    +    S   D       A G + 
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVL----NGSPASTSLDATAEEFKAAGINV 57
Query: 70  V--HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
           V    DV   +D+EN V TA+  +G++DI+ NNAGI  +    +L   + +++ +L+ NL
Sbjct: 58  VVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDWDDVLNTNL 115
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
             A+L TK  +++M     G II+  S+ G+IG      Y +SK G++G  K+ A E   
Sbjct: 116 KSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 188 FGIRVNCVSPYAVSSPM 204
            GI  N V+P  + + M
Sbjct: 176 KGIYCNAVAPGIIKTDM 192

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 20/210 (9%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI---KDDL------GESVCEDIXXX 60
           RLQGKVA ITG A   G   A   ++ GA ++  D+   + +L       E + E +   
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102
Query: 61  XXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                       DV     ++  V+ A++++G +DI+ +N GI ++ +   L + Q  + 
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQ--WS 160
Query: 121 RILSVNLVGAFLGTKHAARVMKPA----GRG-SIISTASVCGVIGGVTSHAYTSSKHGVV 175
            IL  NL+GA+    HA R + P+    G+G S+I  +S  G+ G      Y +SKHGV 
Sbjct: 161 DILQTNLIGAW----HACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPMA 205
           GLM + A E+GR  IRVN V+P AV++ MA
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 96.7 bits (239), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL GK ALITG A  IG   A  + + GA+V IADI  +   +   +I         C+ 
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA-----ACA- 55
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DVT +  I+  V   + ++G +DI+ NNA + D A   I++  +  ++R+ ++N+ G
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAP--IVEITRESYDRLFAINVSG 113
Query: 130 AFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                +  AR M   GR G II+ AS  G  G      Y ++K  V+ L ++  + L R 
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 173
Query: 189 GIRVNCVSP 197
           GI VN ++P
Sbjct: 174 GINVNAIAP 182

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 8   SP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           SP  L   VA++TG A  IG   A  F+K GA V++ D+K +  E+V   I      A G
Sbjct: 6   SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIG 65
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              + C+VT E+  E  +  A+ Q+GK+ ++ NNAG      P   D   ++FE    +N
Sbjct: 66  ---LECNVTDEQHREAVIKAALDQFGKITVLVNNAG---GGGPKPFDMPMSDFEWAFKLN 119
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L   F  ++ AA  M+ AG G+I++ +S+ G    V   +Y SSK  V  L +N A ++G
Sbjct: 120 LFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVG 179
Query: 187 RFGIRVNCVSPYAVSS 202
             GIRVN ++P A+ +
Sbjct: 180 PMGIRVNAIAPGAIKT 195

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 7   MSP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL----GESVCEDIXXXX 61
           MSP   + KV +ITG  G +G+  +  F+K GAKV++ D+   L    G S   D+    
Sbjct: 1   MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDE 60
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
              NG   V  D     D +  V TAV  +G + ++ NNAGI+ +A    +   + +++ 
Sbjct: 61  IVKNGGVAV-ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMT--EKDYKL 117
Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           ++ V+L GAF  TK A    +    G I++T+S  G+ G      Y S+K  ++G  +  
Sbjct: 118 VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETL 177
Query: 182 AVELGRFGIRVNCVSPYAVS 201
           A E  ++ I+ N ++P A S
Sbjct: 178 AKEGAKYNIKANAIAPLARS 197

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 4   ANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           +N+MS    L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +    
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-- 58
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFE 120
              NG   +  +VT  + IE  +     ++G +DI+ NNAGI    + N+L    + E+ 
Sbjct: 59  ---NGKG-MALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLMRMKEEEWS 111
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            I+  NL   F  +K   R M    +G II+  SV G +G      Y ++K GV+G  K+
Sbjct: 112 DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKS 171
Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGF 208
            A E+   G+ VN V+P A+ + M K  
Sbjct: 172 MAREVASRGVTVNTVAPGAIETDMTKAL 199

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 9/201 (4%)
Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHC-D 73
           V ++TG +  IG+  A    K G KVL+   +        E++        G +     D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARS---AKAAEEVSKQIEAYGGQAITFGGD 59
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V+KE D+E  + TA+  +G +D++ NNAGI  +    ++   +++++ ++ +NL G FL 
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFLC 117
Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
           T+ A ++M    +G II+ ASV G+IG +    Y ++K GV+G  K  A E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 194 CVSPYAVSSPMAKGFLKLDDD 214
            V P  ++S M     KL +D
Sbjct: 178 VVCPGFIASDMTA---KLGED 195

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GK+AL+TG +  IG   A  ++K GA ++  DI  +L +            A+G  YV
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHG--YV 89
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDVT E  I+  V    S+ G +DI+ NNAGI+      +++   A+F +++ ++L   
Sbjct: 90  -CDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVP--MIEMTAAQFRQVIDIDLNAP 146
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ +K     M   G G II+  S+   +G  T  AY ++K G+  L KN A E G   I
Sbjct: 147 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 206
Query: 191 RVNCVSPYAVSSPMAKGFLKLDDD 214
           + N + P  +++P      +L  D
Sbjct: 207 QCNGIGPGYIATPQTAPLRELQKD 230

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S RL GKVA+ITGG   IG   A  F + GAKV+I     D+GE   + +       +  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQI 56
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            +   D + E       +     +G +  + NNAGI      ++ +   AE+ ++L+VNL
Sbjct: 57  QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNL 114
Query: 128 VGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE-- 184
            G F GT+   + MK  G G SII+ +S+ G +G  +  AY +SK  V  + K+ A++  
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           L  + +RVN V P  + +P+
Sbjct: 175 LKDYDVRVNTVHPGYIKTPL 194

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RLQGKVAL+TGGA  +G    +L    GAKV  +DI +  G+ +  ++           +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------GERSMF 56
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLV 128
           V  DV+ E D    +     + G L+++ NNAGI+    P  ++  + E F R+L +N  
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL---LPGDMETGRLEDFSRLLKINTE 113
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR- 187
             F+G +     MK  G GSII+ ASV   +       Y++SK  V  L +  A+   + 
Sbjct: 114 SVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQ 172
Query: 188 -FGIRVNCVSPYAVSSPMAKGFL 209
            + IRVN + P  + +PM +  L
Sbjct: 173 GYAIRVNSIHPDGIYTPMMQASL 195

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG +       L ++   +  ++  NL G F  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADEL--WLDVVETNLTGVFRV 141
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 79
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG +       L ++   +  ++  NL G F  
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADEL--WLDVVETNLTGVFRV 137
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 198 VNAVCPGFVETPMA 211

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VA++TG +   G   A  F   G +V   D+  +  E            A+    V  D
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETAR--THWHAYADKVLRVRAD 60
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFL 132
           V  E D+  A+   + Q+G +D++ NNAGI   ++  +L     E F+++++VN+ G FL
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120
Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           G +     M   G G I++ ASV  ++      AYT+SK  V+ L K+ AV+    GIR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 193 NCVSPYAVSSPMAKGFL 209
           N V P  + +PM +  L
Sbjct: 181 NAVCPGMIETPMTQWRL 197

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG         L ++   +  ++  NL G F  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL--WLDVVETNLTGVFRV 141
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 202 VNAVCPGWVETPMA 215

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 94.0 bits (232), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 63
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG         L ++   +  ++  NL G F  
Sbjct: 64  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL--WLDVVETNLTGVFRV 121
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 122 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 181
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 182 VNAVCPGFVETPMA 195

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG         L ++   +  ++  NL G F  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL--WLDVVETNLTGVFRV 141
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG         L ++   +  ++  NL G F  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL--WLDVVETNLTGVFRV 141
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 83
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG         L ++   +  ++  NL G F  
Sbjct: 84  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL--WLDVVETNLTGVFRV 141
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 202 VNAVCPGFVETPMA 215

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC------EDIXXXXXXA 64
           LQG+VA ITG A   G   A   +  GA ++  DI   +  SV       ED+       
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 65  N-----GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
                   + V  DV  +  +   V   + Q+G+LD++  NAG++   +   L ++Q  +
Sbjct: 73  EDQGRKALTRV-LDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ--W 129
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLM 178
           + ++ VNL G +   +     M  AG G SI+  +S  G+     +  Y++SKHG+  L 
Sbjct: 130 DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALT 189
Query: 179 KNTAVELGRFGIRVNCVSPYAVSSPM 204
              A+ELG +GIRVN + PY+V +PM
Sbjct: 190 NTLAIELGEYGIRVNSIHPYSVETPM 215

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           +VAL+TG    IG   AR   K G +V +    ++   +  +++      A+G +   CD
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT---CD 79
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V    +IE  V   V +YG +D++ NNAG         L ++   +  ++  NL G F  
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL--WLDVVETNLTGVFRV 137
Query: 134 TKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 192 VNCVSPYAVSSPMA 205
           VN V P  V +PMA
Sbjct: 198 VNAVCPGFVETPMA 211

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 4   ANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           +N+MS    L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +    
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-- 58
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFE 120
              NG   +  +VT  + IE  +     ++G +DI+ NNAGI    + N+L    + E+ 
Sbjct: 59  ---NGKG-MALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLMRMKEEEWS 111
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            I+  NL   F  +K   R M    +G II+  SV G +G      Y ++K GV+G  K+
Sbjct: 112 DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKS 171
Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGF 208
            A E+   G+ VN V+P  + + M K  
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTKAL 199

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 13/199 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG---- 66
           L+GK A++TG    IG   A   +K GA V+I    +  G+   EDI             
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVI----NGFGQP--EDIERERSTLESKFGV 55
Query: 67  -CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
              Y++ D++  +   + +  A    G LDI+ NNAGI   A       D+  +  I+++
Sbjct: 56  KAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDK--WNAIIAL 113
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL   F GT  A  +M+  G G II+ AS  G++  V   AY ++KHGVVGL K TA+E 
Sbjct: 114 NLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALEN 173
Query: 186 GRFGIRVNCVSPYAVSSPM 204
              GI  N + P  V +P+
Sbjct: 174 AGKGITCNAICPGWVRTPL 192

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 93.2 bits (230), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL  +VA++TGGA +IG       ++ GA+V+IAD+ + +     ED+       +  S 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDL---RMEGHDVSS 66
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-VDEAKPNILDNDQAEFERILSVNLV 128
           V  DVT  + ++NAV +   Q G++DI+   AGI + E K    D    ++ + + +NL 
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAE--DMTDGQWLKQVDINLN 124
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH--AYTSSKHGVVGLMKNTAVELG 186
           G F   +   R+M    +G I++  S+ G+I        AY +SK GV   +++ A E  
Sbjct: 125 GMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA 184
Query: 187 RFGIRVNCVSPYAVSSPMAK 206
             GIR N V+P  + + + +
Sbjct: 185 PHGIRANAVAPTYIETTLTR 204

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX-XXAN 65
           M  +LQGKV+L+TG    IG   A   +  G+ V+I     +  ++V E+I       A+
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEA---KPNILDNDQAEFERI 122
           G   V  ++  E+ I  A     +    +DI+ NNAGI  +    + ++LD     +E +
Sbjct: 61  G---VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLD-----WEEV 112
Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           L VNL G FL T+++ R M     G I++ +SV G  G V    Y+++K G++G  K+ A
Sbjct: 113 LKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLA 172
Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
            EL    + VN V+P  + + M
Sbjct: 173 KELAPRNVLVNAVAPGFIETDM 194

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXA 64
           NS + RL GK A+ITG    IG+  A  F+  GA V+++DI  D    V ++I      A
Sbjct: 3   NSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA 62
Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
             C    CD+T E+++    + A+S+ GK+DI+ NNAG      P   D   A+F R   
Sbjct: 63  FAC---RCDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYE 116
Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           +N+   F  ++  A  M+  G G I++  S+      +   +Y SSK     L++N A +
Sbjct: 117 LNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFD 176
Query: 185 LGRFGIRVNCVSPYAV 200
           LG   IRVN ++P A+
Sbjct: 177 LGEKNIRVNGIAPGAI 192

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVH 71
           + KVAL+TG    IG   A++ +K  + V+         +SV ++I      ++G +   
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA--- 99
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DV+K+++I   +N  ++++  +DI+ NNAGI  +     + ND  E+E +L  NL   F
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND--EWEDVLRTNLNSLF 157
Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
             T+  ++ M     G II+ +S+ G+ G V    Y+SSK GV+G  K+ A EL    I 
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 217
Query: 192 VNCVSPYAVSSPMA 205
           VN ++P  +SS M 
Sbjct: 218 VNAIAPGFISSDMT 231

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+ KV ++TG +  IG   A  F   G+KV+   I D  GE+  +             ++
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-GEAKYD-------------HI 51
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDVT    ++ +++    +YG + ++ NNAGI  E+   I      E+ RI+ VNL G 
Sbjct: 52  ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGY 109
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           +  +K A   M  +   SI++ +SV   I    + AY +SKH V+GL K+ A++     +
Sbjct: 110 YYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-L 168
Query: 191 RVNCVSPYAVSSPMAKGFLKLD 212
           R N V P  + +P+ +   +L+
Sbjct: 169 RCNAVCPATIDTPLVRKAAELE 190

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M   L+ KV ++TG +  IG   A  F   G+KV+   I D  GE+  +           
Sbjct: 9   MFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP-GEAKYD----------- 56
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             ++ CDVT    ++ +++    +YG + ++ NNAGI  E+   I      E+ RI+ VN
Sbjct: 57  --HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVN 112
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G +  +K A   M  +   SI++ +SV   I    + AY +SKH V+GL K+ A++  
Sbjct: 113 LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA 172
Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLD 212
              +R N V P  + +P+ +   +L+
Sbjct: 173 PL-LRCNAVCPATIDTPLVRKAAELE 197

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M+  + GKVAL+TG A  IG   A      GAKV + D   + G   C+           
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQ-CKAALHEQFEPQK 59
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             ++ CDV  ++ + +     V  +G+LDI+ NNAG+          N++  +E+ L +N
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEKTLQIN 109
Query: 127 LV----GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           LV    G +LG  + ++     G G II+ +S+ G++       Y +SKHG+VG  ++ A
Sbjct: 110 LVSVISGTYLGLDYMSKQNGGEG-GIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAA 168
Query: 183 V--ELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           +   L   G+R+N + P  V++ + +   K ++
Sbjct: 169 LAANLMNSGVRLNAICPGFVNTAILESIEKEEN 201

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  ++AL+TG +  IG   A   +  GAKV + +     G +                 V
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAV-NYASSAGAADEVVAAIAAAGGE-AFAV 83
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV++E ++E      + ++G+LD++ NNAGI  +    +L   + +++ +L +NL G 
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL--LLRMKRDDWQSVLDLNLGGV 141
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           FL ++ AA++M     G II+ ASV G +G      Y+++K GV+GL K  A EL   GI
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 191 RVNCVSPYAVSSPM 204
            VN V+P  +++ M
Sbjct: 202 TVNAVAPGFIATDM 215

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 12/192 (6%)
Query: 11  LQGKVALITGGAGS-IGECAARLFSKHGAKVLIADIKDD-LGESVCE--DIXXXXXXANG 66
           L+GKV L+T  AG+ IG   AR     GA V+I+D  +  LGE+  +  D+      A  
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEA-- 77
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V CDVT  + ++  +   V + G+LD++ NNAG+    +  ++D    E++R+L+V 
Sbjct: 78  ---VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL--GGQTPVVDMTDEEWDRVLNVT 132
Query: 127 LVGAFLGTKHAARVMKPAGRGSII-STASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L      T+ A R  +    G +I + ASV G     +   Y ++K GV+ L + +A+E 
Sbjct: 133 LTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEA 192
Query: 186 GRFGIRVNCVSP 197
             FG+R+N VSP
Sbjct: 193 VEFGVRINAVSP 204

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 4   ANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           +N+MS    L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +    
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-- 58
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFE 120
              NG   +  +VT  + IE  +     ++G +DI+ NNAGI    + N+L    + E+ 
Sbjct: 59  ---NGKG-MALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLMRMKEEEWS 111
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            I+  NL   F  +K   R M    +G II+  SV G +G      + ++K GV+G  K+
Sbjct: 112 DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKS 171
Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGF 208
            A E+   G+ VN V+P  + + M K  
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTKAL 199

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL GK  L+TG A  IG  A  LF++ GA ++  D ++ L       +            
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV---- 58
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DV+  K +E     A+ ++G+L  + + AG+   A    L  +   +E++L VNL G
Sbjct: 59  --ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEA--WEKVLRVNLTG 114
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           +FL  + A  V++  G  S++ T SV G +G      Y + K GVVGL +  A+EL R G
Sbjct: 115 SFLVARKAGEVLEEGG--SLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKG 171
Query: 190 IRVNCVSPYAVSSPMAKGF 208
           +RVN + P  + +PM  G 
Sbjct: 172 VRVNVLLPGLIQTPMTAGL 190

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 4   ANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           +N+MS    L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +    
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-- 58
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFE 120
              NG   +  +VT  + IE  +     ++G +DI+ NNA I    + N+L    + E+ 
Sbjct: 59  ---NGKG-MALNVTNPESIEAVLKAITDEFGGVDILVNNAAIT---RDNLLMRMKEEEWS 111
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            I+  NL   F  +K   R M    +G II+  SV G +G      Y ++K GV+G  K+
Sbjct: 112 DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKS 171
Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGF 208
            A E+   G+ VN V+P  + + M K  
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTKAL 199

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 4   ANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           +N+MS    L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +    
Sbjct: 1   SNAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-- 58
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFE 120
              NG   +  +VT  + IE  +     ++G +DI+ NNA I    + N+L    + E+ 
Sbjct: 59  ---NGKG-MALNVTNPESIEAVLKAITDEFGGVDILVNNADIT---RDNLLMRMKEEEWS 111
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            I+  NL   F  +K   R M    +G II+  SV G +G      Y ++K GV+G  K+
Sbjct: 112 DIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKS 171
Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGF 208
            A E+   G+ VN V+P  + + M K  
Sbjct: 172 MAREVASRGVTVNTVAPGFIETDMTKAL 199

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 27/216 (12%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-------------KDDLGES- 52
           M+ R+ GKVA I+G A   G   A   ++ GA ++  DI              +DL E+ 
Sbjct: 9   MTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETA 68
Query: 53  -VCEDIXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP-- 109
            + +D+      A        DV   + +++AV++ V Q G+LDI+  NAG+  + +   
Sbjct: 69  DLVKDLDRRIVTA------QVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLH 122
Query: 110 NILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYT 168
            I DN    ++ ++ +NL G +   K     +   GRG SI+ T+SV G      +  Y 
Sbjct: 123 KIRDN---VWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYI 179
Query: 169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           ++KHGV+GLM+  AVELG   IRVN V P  VS+ M
Sbjct: 180 AAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTM 215

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G+ A++TGG+  IG   AR   K GA V IAD+     ++V   +       NG   V
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE------NGGFAV 63
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVTK   ++ A+  A+   G  D++  NAG V   +P +   D+ E++    VN  G 
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAG-VSTMRPAVDITDE-EWDFNFDVNARGV 121
Query: 131 FLGTKHAAR-VMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           FL  + A R  +    +G I++TAS+   +G      Y++SK  V G  +  A E+    
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKN 181
Query: 190 IRVNCVSPYAVSSPM 204
           IRVNCV P  V + M
Sbjct: 182 IRVNCVCPGFVKTAM 196

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXAN 65
           SM+ +L+G+VA ITG A   G   A   +  GA ++  DI   L   V  D       + 
Sbjct: 4   SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSE 63
Query: 66  GCSYVHC----------DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND 115
               V            D      +   V+  V+  G+LDI+  NAG+   A P   D+ 
Sbjct: 64  TVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGV---AAPQAWDDI 120
Query: 116 QAE-FERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHG 173
             E F  ++ +N+ G +      A  +   GRG SII  +S  G+        YT+SKH 
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHA 180
Query: 174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           V GL +  A ELG+  IRVN V P  V++PM  G
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG 214

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDIXXXXXXANGCSYVH- 71
           K A+ITG    IG   AR  +K GA +++      D   +V +++      ++G    H 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL---SSGTVLHHP 82
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            D TK  +I +       ++G  DI+ NNAG+  +    I D    +++RI++VNL  +F
Sbjct: 83  ADXTKPSEIADXXAXVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
              + A    K  G G II+ AS  G++      AY ++KHG+ GL K  A+E+   G+ 
Sbjct: 141 HTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVT 200
Query: 192 VNCVSPYAVSSPMAK 206
           VN + P  V +P+ +
Sbjct: 201 VNSICPGYVLTPLVE 215

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI----KDDLGESVCEDIXXXXXXAN 65
           R  G+VA++TG    +G   A LF++ GAKV++ D+      D       DI        
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
           G   V  D     D    + TA+  +G++DI+ NNAGI+ +   +++   + ++  +  V
Sbjct: 76  GGEAV-ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDR--SLVKTSEQDWNLVNDV 132
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           +L G+F  T+ A   MK    G II T+S  G+ G      YT++K G++GL    A+E 
Sbjct: 133 HLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEG 192
Query: 186 GRFGIRVNCVSPYAVSSPMAKGFL 209
            R  +  N + P A S  M +G L
Sbjct: 193 ARNNVLCNVIVPTAASR-MTEGIL 215

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S R + KV ++TG  G IG+  A   ++ GA V++ADI  +  E+V + I      A   
Sbjct: 4   SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTA--- 60
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVN 126
             V  DV+  +  +   +  ++++G +D + NNA I    K + +L  D   +++ +SVN
Sbjct: 61  ISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVN 120
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L GA   T+   + M   G G+I++ +S    +    S+ Y  +K G+ GL +  + ELG
Sbjct: 121 LDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---YSNYYGLAKVGINGLTQQLSRELG 177
Query: 187 RFGIRVNCVSP 197
              IR+N ++P
Sbjct: 178 GRNIRINAIAP 188

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 2   LQANSMSP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-----GESVCE 55
            Q +  SP R  G+V L+TG    +G   A  F++ GA V++ D+  D      G    +
Sbjct: 18  FQGHMGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAAD 77
Query: 56  DIXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDN 114
            +        G +  + D  +E   E  V TA+  +G++D++ NNAGI+ D +   I D 
Sbjct: 78  KVVEEIRRRGGKAVANYDSVEEG--EKVVKTALDAFGRIDVVVNNAGILRDRSFARISDE 135
Query: 115 DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV 174
           D   ++ I  V+L G+F  T+ A   MK    G II T+S  G+ G      Y+++K G+
Sbjct: 136 D---WDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGL 192
Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVS 201
           +GL  + A+E  +  I  N ++P A S
Sbjct: 193 LGLANSLAIEGRKSNIHCNTIAPNAGS 219

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 13/205 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GK AL+TG    IG   A++ ++ GA +++    D    ++ E         +G   V
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAE------IARHGVKAV 54
Query: 71  H--CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           H   D++    IE     A  ++G +DI+ NNAGI   A   +       +++I+++NL 
Sbjct: 55  HHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP--VEQFPLESWDKIIALNLS 112
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             F GT+ A   M+    G II+ ASV G++G     AY ++KHGVVGL K   +E    
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATS 172
Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDD 213
            +  N + P  V +P+ +   ++DD
Sbjct: 173 NVTCNAICPGWVLTPLVQK--QIDD 195

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
            +GK+AL+TG +  IG   A   +  GAKV+     ++  +++ + +      ANG   +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLM 57
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
             +VT    IE+ +    +++G++DI+ NNAGI    + N+L      E+  I+  NL  
Sbjct: 58  -LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT---RDNLLMRMKDEEWNDIIETNLSS 113
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  +K   R M     G II+  SV G +G      Y ++K G++G  K+ A E+   G
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRG 173
Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           I VN V+P  + + M +    L DD
Sbjct: 174 ITVNVVAPGFIETDMTRA---LSDD 195

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXAN 65
           S   RL+GK ALITG A  IG   A  + + GA V IADI  +       +I        
Sbjct: 1   SXXKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYA-- 58
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT++  I+ A+   V   G LDI+ NNA + D A   I++  +  +E++ ++
Sbjct: 59  ----VQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAP--IVEITRESYEKLFAI 112
Query: 126 NLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           N+ G     + AAR     GR G II+ AS  G  G      Y ++K  V+ L ++  ++
Sbjct: 113 NVAGTLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLD 172
Query: 185 LGRFGIRVNCVSP 197
           L +  I VN ++P
Sbjct: 173 LIKHRINVNAIAP 185

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIA--DIKDDLGESVCEDIXXXXXXANGCSYVH 71
           KVA++TGG+  IG        ++GAKV+    D K D+               N   +  
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------------NVSDHFK 59
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DVT E++++ AV     +YG++DI+ NNAGI ++  P  L   +  + RI+ VN+ G++
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGI-EQYSPLHLTPTEI-WRRIIDVNVNGSY 117
Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           L  K+   VM   G GSII+ ASV        + AY +SKH ++GL ++ A++     IR
Sbjct: 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176
Query: 192 VNCVSPYAVSSPMAKGFLKLD 212
            N V P  + +PM     K++
Sbjct: 177 CNAVCPGTIMTPMVIKAAKME 197

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           +L+ +V ++TG +  +G    R  ++ GA VL  D+K   GE    ++           +
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAA------VRF 57
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG------IVDEAKPNILDNDQAEFERIL 123
            + DVT E D   A+  A  ++G +  + N AG      I+  + P+ LD+    F R +
Sbjct: 58  RNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDS----FARTV 113
Query: 124 SVNLVGAFLGTKHAARVM---KPAG---RGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           +VNL+G F   + AA V    +P     RG I++TAS+    G +   AY +SK GV  L
Sbjct: 114 AVNLIGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAAL 173
Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
               A EL RFGIRV  ++P    +P   G
Sbjct: 174 TLPAARELARFGIRVVTIAPGIFDTPXXAG 203

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDIXXXXXXA 64
           SM+  L+ KVA+ITG  G IG   +R+ ++ GA+V++AD+ + DL  +            
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS-------VG 56
Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
            G  +   D+T E  +   ++  +  +G+LDI+ NNA   D A   +       ++   +
Sbjct: 57  RGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116
Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           VN  G  L  K+A   +  AG G+I++ +S         S AY  +K  +  L +  A +
Sbjct: 117 VNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQ 176
Query: 185 LGRFGIRVNCVSPYAVSSP 203
            GR G+R N ++P  V +P
Sbjct: 177 YGRHGVRCNAIAPGLVRTP 195

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 9/196 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           + RL GK AL+TG A  IG+  A   +  GA V+++DI  +  ++    I          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKA 54
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
             +  D++    ++       +  G +DI+ NNA IV     + +D D   + +I+ VNL
Sbjct: 55  RAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH--WRKIIDVNL 112
Query: 128 VGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            G F+ T+     M+ AG+ G +IS AS     G     AY ++K GV+G  +  A ELG
Sbjct: 113 TGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG 172
Query: 187 RFGIRVNCVSPYAVSS 202
           ++ I  N V+P  + S
Sbjct: 173 KYNITANAVTPGLIES 188

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G+ AL+TG +  +G   A   +  GA++LI          V + +       +    V
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPS---RVAQTVQEFRNVGHDAEAV 80
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT E +I  A      Q   +DI+ NNAGI  + +  +++ + A+++R++  NL  A
Sbjct: 81  AFDVTSESEIIEAFARLDEQGIDVDILVNNAGI--QFRKPMIELETADWQRVIDTNLTSA 138
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+  + AA+ M P G G I++  S+   +   T   YT +K G+  L +  A E  ++GI
Sbjct: 139 FMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGI 198
Query: 191 RVNCVSP 197
           + N + P
Sbjct: 199 QANAIGP 205

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G+ A++TG    IG   A  +++ GA VL     D + E V ++I      A+G    
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKE-VADEI------ADGGGSA 81
Query: 71  HCDVTKEKDIENAVNTA--VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
              V    D+E A N A  ++   ++D++ NNAGI+  A     +     +  +L+VNL 
Sbjct: 82  EAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAE--EVSLGRWREVLTVNLD 139
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            A++ ++     M   G G I++ AS+    GG    AY +SKH VVGL +  A E    
Sbjct: 140 AAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR 199
Query: 189 GIRVNCVSP-YAVSSPMAKGFLKLDDD 214
           G+ VN ++P Y V++  A   L+ DD+
Sbjct: 200 GVGVNALAPGYVVTANTAA--LRADDE 224

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDIXXXXXXAN 65
           M+ RL+ K+A+ITGGA  IG   A  F+  GA + IAD +     E+   ++        
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLT-- 58
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V CDV++  D+E      +S +G+ DI+ NNAGI      + L  +Q  +++   +
Sbjct: 59  ----VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQ--WKKTFEI 112
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+   FL  K     MK  G G II+  S    +       Y S+K   +G  +  A +L
Sbjct: 113 NVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL 172
Query: 186 GRFGIRVNCVSPYAVSS 202
           G+ GI VN ++P  V +
Sbjct: 173 GKDGITVNAIAPSLVRT 189

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 13/213 (6%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXAN 65
           SMS  L+GKVALITG     GE  A+ F+K GAKV+I D      E V  +I       +
Sbjct: 4   SMS--LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GD 55
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  D++KE D++ AV  A+S++GK+DI+ NNAGI  + + N    +  EF+RI+ V
Sbjct: 56  AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQ-NAELVEPEEFDRIVGV 114
Query: 126 NLVGAFLGTKHAARVMKPAG-RGS---IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           N+ G +L T       K  G +G    I++ AS            Y ++K  VV + K  
Sbjct: 115 NVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKAL 174
Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           A+EL    IRV  ++P A  +P+   F+  D +
Sbjct: 175 AIELAPAKIRVVALNPVAGETPLLTTFMGEDSE 207

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+ KVAL+T     IG   AR  ++ GA V+++  K    E+V   +          +  
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ---ENVDRTVATLQGEGLSVTGT 68
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            C V K +D E  V  AV+ +G +DI+ +NA  V+    NI+D  +  +++IL VN+   
Sbjct: 69  VCHVGKAEDRERLVAMAVNLHGGVDILVSNAA-VNPFFGNIIDATEEVWDKILHVNVKAT 127
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            L TK     M+  G GS++  +SV           Y  SK  ++GL KN AVEL    I
Sbjct: 128 VLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNI 187
Query: 191 RVNCVSP 197
           RVNC++P
Sbjct: 188 RVNCLAP 194

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
            +GK+AL+TG +  IG   A   +  GAKV+     ++  +++ + +      ANG   +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLM 57
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
             +VT    IE+ +    +++G++DI+ NNAGI    + N+L      E+  I+  NL  
Sbjct: 58  -LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT---RDNLLMRMKDEEWNDIIETNLSS 113
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  +K   R M     G II+  SV G +G      + ++K G++G  K+ A E+   G
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRG 173
Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           I VN V+P  + + M +    L DD
Sbjct: 174 ITVNVVAPGFIETDMTRA---LSDD 195

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 2   LQANSMSP----RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI 57
           L+A +  P    +L G+ AL+TG  G IGE  AR F   GA V +   ++D  + +  D+
Sbjct: 12  LEAQTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL 71
Query: 58  XXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQ 116
                          +++  K I+     A  +   +DI+ NNAGI  D     + D D 
Sbjct: 72  ------GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQD- 124
Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
             ++ +L+VNL  A   T+     M     G II+  S+ GV+G      Y ++K G++G
Sbjct: 125 --WDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIG 182
Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSSPM 204
             K  A E+    I VNC++P  + S M
Sbjct: 183 FSKALAQEIASRNITVNCIAPGFIKSAM 210

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +       NG    
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGXA 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
             +VT  + IE  +     ++G +DI+ NNAGI    + N+L    + E+  I   NL  
Sbjct: 62  -LNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLXRXKEEEWSDIXETNLTS 117
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  +K   R      +G II+  SV G  G      Y ++K GV+G  K+ A E+   G
Sbjct: 118 IFRLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRG 177
Query: 190 IRVNCVSPYAVSSPMAKGFLKLD 212
           + VN V+P         GF++ D
Sbjct: 178 VTVNTVAP---------GFIETD 191

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 8   SP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-----GESVCEDIXXXX 61
           SP R  G+V L+TG  G +G   A  F++ GA V++ D+  D      G S  + +    
Sbjct: 3   SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI 62
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFE 120
               G +  + D  +    E  V TA+  +G++D++ NNAGI+ D +   I D D   ++
Sbjct: 63  RRRGGKAVANYDSVEAG--EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED---WD 117
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            I  V+L G+F  T+ A    K    G II TAS  G+ G      Y+++K G++GL   
Sbjct: 118 IIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANT 177
Query: 181 TAVELGRFGIRVNCVSPYAVS 201
             +E  +  I  N ++P A S
Sbjct: 178 LVIEGRKNNIHCNTIAPNAGS 198

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVL--IADIKDDLGESVCEDIXXXXXXANGCSYVH 71
           + A +TG +  IG   AR  +  G  V     D K+    +  + +       +G S   
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV--SAAVDGLRAAGHDVDGSS--- 79
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
           CDVT   ++  AV  AV ++G + I+ N+AG          D D A +  +L  NL G F
Sbjct: 80  CDVTSTDEVHAAVAAAVERFGPIGILVNSAG--RNGGGETADLDDALWADVLDTNLTGVF 137
Query: 132 LGTKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
             T+   R   M+ AG G I++ AS  G  G + +  YT+SKHGVVG  K+   EL + G
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197
Query: 190 IRVNCVSPYAVSSPMAK 206
           I VN V P  V +PMA+
Sbjct: 198 ITVNAVCPGYVETPMAE 214

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVTK 76
           L+TGG   IG   AR F+  G KV I     +  E              G   V CD+T 
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------------GFLAVKCDITD 70
Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
            + +E A       +G ++++  NAG+  +    ++   + +F  ++  NL G F   K 
Sbjct: 71  TEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVETNLTGTFRVVKR 128
Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
           A R M  A +G ++  +SV G++G      Y +SK G+VG  ++ A ELG   I  N V+
Sbjct: 129 ANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVA 188
Query: 197 PYAVSSPMAK 206
           P  V + M K
Sbjct: 189 PGFVDTDMTK 198

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCEDIXXXXXXANGCSY-- 69
           K AL+TG +  IG   A   ++ G  V +  A  K+   E+V E+I      A G     
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIK-----AKGVDSFA 64
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
           +  +V    +++  +   VSQ+G LD++ NNAGI    + N+L    + E++ ++  NL 
Sbjct: 65  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLK 121
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G F   + A   M     G+II+ +SV G +G      Y ++K GV+GL K+ A EL   
Sbjct: 122 GVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR 181
Query: 189 GIRVNCVSPYAVSSPM 204
           GI VN V+P  + S M
Sbjct: 182 GITVNAVAPGFIVSDM 197

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           + RL GK AL+TG A  IG+  A   +  GA V+++DI  +  ++    I          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKA 54
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
             +  D++    ++       +  G +DI+ NNA IV     + +D D   + +I+ VNL
Sbjct: 55  RAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH--WRKIIDVNL 112
Query: 128 VGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            G F+ T+      + AG+ G +IS AS     G     AY ++K GV+G  +  A ELG
Sbjct: 113 TGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELG 172
Query: 187 RFGIRVNCVSPYAVSS 202
           ++ I  N V+P  + S
Sbjct: 173 KYNITANAVTPGLIES 188

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCED 56
            Q+N+M  +  GK  LITG +  IG   A+  +  G KV I     A++ D L   + E 
Sbjct: 20  FQSNAM--QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK 77
Query: 57  IXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ 116
                      + +  D   E D   A+ T V   G L  + NNAG+V +     +  + 
Sbjct: 78  -------GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTE- 129
Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
            +F  ++  NL  AF+G + A +VM  +  GS+++ AS+ G  G +    Y++SK G++ 
Sbjct: 130 -DFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIA 188
Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           + K+ A E     IR N V+P  + + M
Sbjct: 189 MSKSFAYEGALRNIRFNSVTPGFIETDM 216

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GK +LITG +  IG   ARL  K G+KV+I+   ++  +S+   +       +  +  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK------DNYTIE 65
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            C++  +++  N +    S+   LDI+  NAGI  +    I   DQ +F++++ +NL   
Sbjct: 66  VCNLANKEECSNLI----SKTSNLDILVCNAGITSDTLA-IRMKDQ-DFDKVIDINLKAN 119
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+  + A + M     G II+ +S+ G+ G      Y +SK G++G+ K+ + E+   GI
Sbjct: 120 FILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGI 179
Query: 191 RVNCVSPYAVSSPM 204
            VN V+P  + S M
Sbjct: 180 TVNAVAPGFIKSDM 193

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           PR   K  +ITG +  IG   A LF++ GA V I     +  E   + I          +
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61
Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG--IVDEAKPNILDNDQAEFERILSVN 126
            V  DVT E   +  +N+ + Q+GK+D++ NNAG  I D       D     + + L +N
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121
Query: 127 LVGAFLGTKHAARVMKP---AGRGSIISTAS-VCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           L      TK     +KP   A +G I++ +S V G         Y  +K  +    ++TA
Sbjct: 122 LQAVIEMTKK----VKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTA 177
Query: 183 VELGRFGIRVNCVSP 197
           ++L +FGIRVN VSP
Sbjct: 178 IDLAKFGIRVNSVSP 192

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-------------IKDDLGESVCEDI 57
            +GK ALITGGA  +G   A   ++ GA + I D               DDL E+V    
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA--- 64
Query: 58  XXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
                    C     DV     +E+ V  A    G +DI   NAGI   A   + + + A
Sbjct: 65  -LVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIAL--LPEVESA 121
Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           +++ ++  NL G F      A  M     G I++ +S+ G        +Y SSK GV+GL
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGL 181
Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPM 204
            K  A +L  +GI VN V+P  + +PM
Sbjct: 182 TKCAAHDLVGYGITVNAVAPGNIETPM 208

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 24/209 (11%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S  ++  VA++TGGA  +G    +     GA+V++ DI+   GE V  D+       +  
Sbjct: 4   SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADL------GDRA 54
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND----QAEFERIL 123
            +   DVT E  + +A++ A    G L I+ N AG  +  +  +L  D     A F +I+
Sbjct: 55  RFAAADVTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIR--VLSRDGVFSLAAFRKIV 111
Query: 124 SVNLVGAFLGTKHAA-RVMK--PAG-----RGSIISTASVCGVIGGVTSHAYTSSKHGVV 175
            +NLVG+F   + AA R+ K  P G     RG II+TASV    G +   AY++SK GVV
Sbjct: 112 DINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVV 171
Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           G+    A +L    IRV  ++P    +P+
Sbjct: 172 GMTLPIARDLASHRIRVMTIAPGLFDTPL 200

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXAN 65
           SM   L  +VA++TG +  IG   A   ++ GA V+     +   E +            
Sbjct: 21  SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGR 80
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
           G      D T    ++  V + + ++G L+++ NNAGI  +     + +D  E++ ++  
Sbjct: 81  GAVLNVNDATA---VDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD--EWDAVIDT 135
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL   F  ++   R M  A  G I++  SV G  G      Y ++K GV G+ +  A E+
Sbjct: 136 NLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREI 195
Query: 186 GRFGIRVNCVSPYAVSSPMAKGF 208
           G  GI VNCV+P  + + M KG 
Sbjct: 196 GSRGITVNCVAPGFIDTDMTKGL 218

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+G+VAL+TGG+  +G   A+  ++ G  V++A    +      + +             
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMA--F 76
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV+  ++++  +     ++GKLD + N AGI           D  EF +++ VNL G 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD--EFRQVIEVNLFGT 134
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS---HAYTSSKHGVVGLMKNTAVELGR 187
           +   + A  +++ +   SII+  S+   +  VT     AY +SK GV  L K  A E GR
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLT--VEEVTMPNISAYAASKGGVASLTKALAKEWGR 192
Query: 188 FGIRVNCVSPYAVSSPMAKGFL----KLD 212
           +GIRVN ++P    + M +       KLD
Sbjct: 193 YGIRVNVIAPGWYRTKMTEAVFSDPEKLD 221

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           KVAL+TG    IG+  A    K G  V IAD  D   ++V  +I      A     V  D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA---VKVD 59
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSVNLV 128
           V+    +  AV  A    G  D++ NNAG+     ++   P I+D       ++ ++N+ 
Sbjct: 60  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD-------KVYNINVK 112
Query: 129 GAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           G   G + A    K  G G  II+  S  G +G      Y+SSK  V GL +  A +L  
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 172
Query: 188 FGIRVNCVSPYAVSSPM 204
            GI VN   P  V +PM
Sbjct: 173 LGITVNGYCPGIVKTPM 189

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  KVAL+T     IG   AR  ++ GA V+++  K    ++V + +          +  
Sbjct: 13  LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQ---QNVDQAVATLQGEGLSVTGT 69
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            C V K +D E  V TAV  +G +DI+ +NA  V+    +I+D  +  +++ L +N+   
Sbjct: 70  VCHVGKAEDRERLVATAVKLHGGIDILVSNAA-VNPFFGSIMDVTEEVWDKTLDINVKAP 128
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            L TK     M+  G GS++  +S+           Y  SK  ++GL K  A+EL    I
Sbjct: 129 ALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNI 188
Query: 191 RVNCVSPYAVSSPMAKGFLKLDDD 214
           RVNC++P  + +  ++  L +D +
Sbjct: 189 RVNCLAPGLIKTSFSR-MLWMDKE 211

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI---ADIKDDLGESVCEDIXXXXXXANGC 67
           L+GKVA +TG +G IG   A  +++ GA V I   +   D+  E + +            
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKA---- 87
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
               C+++  K +E  ++     +G +D+   NAG+     P I  ++   + +I+SV+L
Sbjct: 88  --YKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDL 145
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT--SHAYTSSKHGVVGLMKNTAVEL 185
            G +  + +  ++ K  G+GS+I T+S+ G I  +      Y ++K     L K+ A+E 
Sbjct: 146 NGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEW 205
Query: 186 GRFGIRVNCVSP 197
             F  RVN +SP
Sbjct: 206 APFA-RVNTISP 216

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCEDIXXXXXXANGCSY-- 69
           K AL+TG +  IG   A   ++ G  V +  A  K+   E+V E+I      A G     
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEK-AEAVVEEIK-----AKGVDSFA 58
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
           +  +V    +++  +   VSQ+G LD++ NNAGI    + N+L    + E++ ++  NL 
Sbjct: 59  IQANVADADEVKAXIKEVVSQFGSLDVLVNNAGIT---RDNLLXRXKEQEWDDVIDTNLK 115
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G F   + A         G+II+ +SV G +G      Y ++K GV+GL K+ A EL   
Sbjct: 116 GVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR 175
Query: 189 GIRVNCVSP 197
           GI VN V+P
Sbjct: 176 GITVNAVAP 184

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL GKV ++T  A  IG+ AA  F++ GAKV+  DI     ES  +++        G   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI----NESKLQELEKYP----GIQT 54
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DVTK+K I+   N    +  +LD++FN AG V      +LD ++ +++  +++N+  
Sbjct: 55  RVLDVTKKKQIDQFAN----EVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRS 108
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGRF 188
            +L  K     M     G+II+ +SV   + GV +   Y+++K  V+GL K+ A +  + 
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168
Query: 189 GIRVNCVSPYAVSSP 203
           GIR NCV P  V +P
Sbjct: 169 GIRCNCVCPGTVDTP 183

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 4/196 (2%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           R   KVA+ITG +  IG   A LF++ GAKV I     +  E   + I          + 
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG--IVDEAKPNILDNDQAEFERILSVNL 127
           V  DVT +   +  ++T + ++GKLDI+ NNAG  I D             ++  L++NL
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNTAVELG 186
                 TK A   +  + +G I++ +S+   +       Y S +K  +    +NTA++L 
Sbjct: 123 RSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 187 RFGIRVNCVSPYAVSS 202
           + GIRVN +SP  V++
Sbjct: 182 QHGIRVNSISPGLVAT 197

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI-----XXXX 61
           M  RL+  +AL+TG    IG   +   +  GA V   D+     +     +         
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKL-DIMFNNAGIVDEAKPNILDNDQAEFE 120
              N  ++   DV++ +     +    + + +   ++ + AGI  +    +L   + +++
Sbjct: 61  PRGNHAAF-QADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDE--FLLHMSEDDWD 117
Query: 121 RILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           ++++VNL G FL T+ AA+ +   G RGSII+ +S+ G +G V    Y +SK GV+GL +
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQ 177
Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAK 206
             A ELGR GIR N V P  +++PM +
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQ 204

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 80.1 bits (196), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G+VA++TG +  IG   AR     GA+V++     +   +V  +I      A G +  
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA----AGGEAES 82
Query: 71  H-CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           H CD++    I       ++ +G+ D++ NNAG+     P +     AE++ +++VNL  
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGP-LHTMKPAEWDALIAVNLKA 141
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            +L  +  A  M  A RG II+ +S+ G        AYT+SK G+ GLM + A EL +  
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQ 201
Query: 190 IRVNCVSPYAVSSPMAKGF 208
           +RV+ V+P +V +    G 
Sbjct: 202 VRVSLVAPGSVRTEFGVGL 220

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  +  L+TGG   IG   A +F++ GA V +A        SV  ++      A     V
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGV 96
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV+      +A  T V  +G LD++  NAGI  EA+ + +  +Q     +L VN+ G 
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQ--LSEVLDVNVKGT 154
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVT--SHAYTSSKHGVVGLMKNTAVELGRF 188
               +     +  +GRG +I T+S+ G + G    SH Y +SK   +G M+  A+EL   
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSH-YGASKAAQLGFMRTAAIELAPR 213
Query: 189 GIRVNCVSP 197
           G+ VN + P
Sbjct: 214 GVTVNAILP 222

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           R  GK  +ITG +  IG  AA +F+K GA+V I    +D  E   + I      A   + 
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DVT+    ++ +NT ++++GK+DI+ NNAG          D     +++   +N   
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 130 AF-LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA----YTSSKHGVVGLMKNTAVE 184
              +  K    ++K   +G I++ +S   ++ G  +H+    Y  +K  +    + TA++
Sbjct: 143 VIEMTQKTKEHLIKT--KGEIVNVSS---IVAGPQAHSGYPYYACAKAALDQYTRCTAID 197
Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFL 209
           L + G+RVN VSP AV    A GF+
Sbjct: 198 LIQHGVRVNSVSPGAV----ATGFM 218

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           KVA++TGGA  IG   +   +  G  + +AD+     E   E I           +V  D
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQ-EEQAAETIKLIEAADQKAVFVGLD 61
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           VT + + ++A++ A  + G  D++ NNAGI  + KP +L+  + + ++I SVN+   F G
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKP-LLEVTEEDLKQIYSVNVFSVFFG 119
Query: 134 TKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            + A+R     G +G II+ AS+  + G     AY+++K  V GL +  A EL   G  V
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV 179
Query: 193 NCVSPYAVSSPM 204
           N  +P  V + M
Sbjct: 180 NAYAPGIVGTGM 191

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GK AL+TG A  +G   A   +  GA+V++ DI+  L     + +      A+G ++ 
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF- 65
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT E  IE A +   ++   +DI+ NNAGI  + +  +++ +   +++++  NL  A
Sbjct: 66  --DVTDELAIEAAFSKLDAEGIHVDILINNAGI--QYRKPMVELELENWQKVIDTNLTSA 121
Query: 131 FLGTKHAARVM--KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           FL ++ AA+ M  + +G G II+  S+       T   YT++K G+  L  + A E  +F
Sbjct: 122 FLVSRSAAKRMIARNSG-GKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF 180
Query: 189 GIRVNCVSPYAVSSPMAKGFLK 210
            I+ N + P  + + M    ++
Sbjct: 181 NIQTNAIGPGYILTDMNTALIE 202

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDIXXXXXX 63
            S    L+ K  L+TGG   IG      F+  GA +   A  + +L E + +        
Sbjct: 6   QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV 65
Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
                   CD +   + E  + T  S +G KLDI+ NN G +  +KP  LD    +F   
Sbjct: 66  TGSV----CDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPT-LDYTAEDFSFH 119
Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           +S NL  A+  ++ A  ++K +G G+II  +S+ GV+       Y+++K  +  L +N A
Sbjct: 120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179
Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            E    GIR N V+P  +++P+A+     DD+
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAV--YDDE 209

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 32/207 (15%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           + AL+TGGA  +G  AA      G +V++ D++ + GE +               YV  D
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLI--------------YVEGD 47
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAG------IVDEAKPNILDNDQAEFERILSVNL 127
           VT+E+D+  AV  A  +   L  + + AG      I+ +  P+ L++    F R+L VNL
Sbjct: 48  VTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLES----FRRVLEVNL 102
Query: 128 VGAFLGTKHAARVMKP------AGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +G F   + AA  M+         RG I++TASV    G +   AY +SK GVV L    
Sbjct: 103 LGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPA 162
Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGF 208
           A EL  +GIRV  V+P    +P+ +G 
Sbjct: 163 ARELAGWGIRVVTVAPGLFDTPLLQGL 189

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 2   LQANSMSP-------RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC 54
           L+A +  P       + +G  A+++GGAG +GE   R     G  V+IAD+  + G+++ 
Sbjct: 12  LEAQTQGPGSMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA 71
Query: 55  EDIXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN 114
           +++       N   +V  +VT E  +  A+  A +Q G+L       G    A+  +  +
Sbjct: 72  DEL------GNRAEFVSTNVTSEDSVLAAIE-AANQLGRLRYAVVAHGGFGVAQRIVQRD 124
Query: 115 ----DQAEFERILSVNLVGAF------LGTKHAARVMKPAGRGSIISTASVCGVIGGVTS 164
               D   F + + + L G +        +  AA   +   RG+++ TAS+ G  G +  
Sbjct: 125 GSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ 184
Query: 165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
            AY ++K GV+GL    A +L   GIRVN ++P  + +P+
Sbjct: 185 TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI 224

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 28/205 (13%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
            +GK+AL+TG +  IG   A   +  GAKV+     ++  +++ + +      ANG   +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLM 57
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLVG 129
             +VT    IE+ +    +++G++DI+ NNAGI    + N+L      E+  I+  NL  
Sbjct: 58  -LNVTDPASIESVLEKIRAEFGEVDILVNNAGIT---RDNLLMRMKDEEWNDIIETNLSS 113
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  +K   R M     G II+       IGG  +  Y ++K G++G  K+ A E+   G
Sbjct: 114 VFRLSKAVMRAMMKKRHGRIIT-------IGGQAN--YAAAKAGLIGFSKSLAREVASRG 164
Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           I VN V+P         GF++  DD
Sbjct: 165 ITVNVVAP---------GFIETSDD 180

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           +L G+VALITGGA  +G      F   GA+V + D      E + E        A G   
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVG--- 55
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAK-----PNILDNDQAEFERILS 124
           V  DV   +D + A    ++ +GK+D +  NAGI D +      P   D   A F+ I  
Sbjct: 56  VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPE--DKIDAAFDDIFH 113
Query: 125 VNLVGAFLGTKHAARVMKPA---GRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           VN+ G      HA +   PA    RGS++ T S  G         YT++KH VVGL++  
Sbjct: 114 VNVKGYI----HAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQM 169
Query: 182 AVELGRFGIRVNCVSP 197
           A EL    +RVN V+P
Sbjct: 170 AFELAPH-VRVNGVAP 184

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 25/203 (12%)
Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHC 72
           G+  L+TGG+  IG   A  F++ GA+V+   +  D                   +  H 
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD----------------GVHAPRHP 54
Query: 73  DVTKEK-DIENA--VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            + +E+ DI ++  +        +LD++ NNAGI  + +    + D A FER+L +NL  
Sbjct: 55  RIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDRE----EYDLATFERVLRLNLSA 110
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           A L ++ A  ++   G GSI++ AS+    G     AY++SK  +V L ++ A E     
Sbjct: 111 AMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAER 169
Query: 190 IRVNCVSPYAVSSPMAKGFLKLD 212
           IRVN ++P  + +P+  G LK D
Sbjct: 170 IRVNAIAPGWIDTPLGAG-LKAD 191

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+     ES  E++        G + +
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----ESAAENLAETASKVGGTA-L 248
Query: 71  HCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
             DVT +  ++         +G K DI+ NNAGI    +  +L N D A ++ +L+VNL+
Sbjct: 249 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT---RDKLLANMDDARWDAVLAVNLL 305
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                T+           G +I  +S+ G+ G      Y ++K G++G+ +  A  L   
Sbjct: 306 APLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 365
Query: 189 GIRVNCVSPYAVSSPM 204
           GI +N V+P  + + M
Sbjct: 366 GITINAVAPGFIETQM 381

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+     ES  E++        G + +
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----ESAAENLAETASKVGGTA-L 272
Query: 71  HCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
             DVT +  ++         +G K DI+ NNAGI  +    +L N D A ++ +L+VNL+
Sbjct: 273 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRD---KLLANMDDARWDAVLAVNLL 329
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                T+           G +I  +S+ G+ G      Y ++K G++G+ +  A  L   
Sbjct: 330 APLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 389
Query: 189 GIRVNCVSPYAVSSPM 204
           GI +N V+P  + + M
Sbjct: 390 GITINAVAPGFIETQM 405

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+     ES  E++        G + +
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----ESAAENLAETASKVGGTA-L 264
Query: 71  HCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
             DVT +  ++         +G K DI+ NNAGI  +    +L N D A ++ +L+VNL+
Sbjct: 265 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRD---KLLANMDDARWDAVLAVNLL 321
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                T+           G +I  +S+ G+ G      Y ++K G++G+ +  A  L   
Sbjct: 322 APLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 381
Query: 189 GIRVNCVSPYAVSSPM 204
           GI +N V+P  + + M
Sbjct: 382 GITINAVAPGFIETQM 397

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+     ES  E++        G + +
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----ESAAENLAETASKVGGTA-L 256
Query: 71  HCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
             DVT +  ++         +G K DI+ NNAGI    +  +L N D A ++ +L+VNL+
Sbjct: 257 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT---RDKLLANMDDARWDAVLAVNLL 313
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                T+           G +I  +S+ G+ G      Y ++K G++G+ +  A  L   
Sbjct: 314 APLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 373
Query: 189 GIRVNCVSPYAVSSPM 204
           GI +N V+P  + + M
Sbjct: 374 GITINAVAPGFIETQM 389

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+     ES  E++        G + +
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDV-----ESAAENLAETASKVGGTA-L 285
Query: 71  HCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
             DVT +  ++         +G K DI+ NNAGI  +    +L N D A ++ +L+VNL+
Sbjct: 286 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRD---KLLANMDDARWDAVLAVNLL 342
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                T+           G +I  +S+ G+ G      Y ++K G++G+ +  A  L   
Sbjct: 343 APLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAK 402
Query: 189 GIRVNCVSPYAVSSPM 204
           GI +N V+P  + + M
Sbjct: 403 GITINAVAPGFIETQM 418

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHC- 72
           KV LITG +G IGE  AR     GAK+L+   +    E++  +I      A G +     
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEI----RDAGGTALAQVL 60
Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DVT    +      AV  +G++D++ NNAG++  +    +  D  E+ER++ VN+ G   
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD--EWERMIDVNIKGVLW 118
Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           G      +M+    G II+  S+  +    T+  Y ++K  V  +      E     IRV
Sbjct: 119 GIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRV 176
Query: 193 NCVSPYAVSSPMA 205
            CV+P  V S +A
Sbjct: 177 TCVNPGVVESELA 189

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
             G+ A++TGGA  IG   A  F++ GA+++++D+     E     +      A+G   V
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHG---V 85
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV    ++    + A    G +D++F+NAGIV       +++D  ++  ++ ++L G+
Sbjct: 86  VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD--DWRWVIDIDLWGS 143
Query: 131 FLGTK-HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               +    R+++    G I  TAS  G++       Y  +K+GVVGL +  A E+   G
Sbjct: 144 IHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNG 203
Query: 190 IRVNCVSPYAVSSPM 204
           I V+ + P  V + +
Sbjct: 204 IGVSVLCPMVVETKL 218

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           LQ ++ L+TG +  IG  AA  ++++GA V++    ++    V + I            +
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++     +   + Y +LD + +NAG++ E  P + + D   ++ ++ VN+   
Sbjct: 72  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGP-MSEQDPQIWQDVMQVNVNAT 130
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ T+    ++  +  GS++ T+S  G  G     AY +SK    G+M+  A E     +
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSL 190
Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
           RVNC++P    + M       +D
Sbjct: 191 RVNCINPGGTRTSMRASAFPTED 213

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVTK 76
           LITG +  IGE  ARL    G +V +    +   +++  ++        G   +  DV +
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-------EGALPLPGDVRE 61
Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
           E D   AV      +G+L  + NNAG V   KP + +    E+  +L  NL GAFLG +H
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAG-VGVMKP-VHELTLEEWRLVLDTNLTGAFLGIRH 119
Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
           A   +   G G+I++  S+ G        AY +SK G++GL     ++L    +RV  V 
Sbjct: 120 AVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVL 179
Query: 197 P------YAVSSPMAKGFLKLDD 213
           P      +A ++P     LK +D
Sbjct: 180 PGSVDTGFAGNTPGQAWKLKPED 202

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S +L+GK  LITGG   IG   +  F+K GA + IA + D+ G++  E           C
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL-DEEGDA-NETKQYVEKEGVKC 99
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVN 126
             +  D++ E+  ++ V   V Q G L+I+ NN  +  +     L+   AE  E+   +N
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN--VAQQYPQQGLEYITAEQLEKTFRIN 157
Query: 127 LVGAFLGTKHAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           +   F  TK A   +K   +G  II+TAS+    G  T   Y+++K  +V   ++ +  L
Sbjct: 158 IFSYFHVTKAALSHLK---QGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214
Query: 186 GRFGIRVNCVSPYAVSSPM 204
            + GIRVN V+P  + +P+
Sbjct: 215 VQKGIRVNGVAPGPIWTPL 233

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S +L+GK  LITGG   IG   +  F+K GA + IA + D+ G++  E           C
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL-DEEGDA-NETKQYVEKEGVKC 99
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVN 126
             +  D++ E+  ++ V   V Q G L+I+ NN  +  +     L+   AE  E+   +N
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN--VAQQYPQQGLEYITAEQLEKTFRIN 157
Query: 127 LVGAFLGTKHAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           +   F  TK A   +K   +G  II+TAS+    G  T   Y+++K  +V   ++ +  L
Sbjct: 158 IFSYFHVTKAALSHLK---QGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214
Query: 186 GRFGIRVNCVSPYAVSSPM 204
            + GIRVN V+P  + +P+
Sbjct: 215 VQKGIRVNGVAPGPIWTPL 233

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S  L+GKVAL+TG    IG   A    + G KV++        ES  E +       +  
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKKNGSDA 81
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
           + V  +V   +DI      AV  +GKLDI+ +N+G+V     ++ D    EF+R+ ++N 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG--HVKDVTPEEFDRVFTINT 139
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELG 186
            G F   + A + ++  GR  +I   S+ G    V  HA Y+ SK  +    +  A+++ 
Sbjct: 140 RGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 187 RFGIRVNCVSPYAVSSPM 204
              I VN V+P  + + M
Sbjct: 198 DKKITVNVVAPGGIKTDM 215

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G+ AL+TG  G +GE  AR     GA V +   +++  + +  ++             
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER------IFVF 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLVG 129
             +++  + ++     A  + G +DI+ NNAGI  D     + D D   ++ +L+VNL  
Sbjct: 62  PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED---WDAVLTVNLTS 118
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  T+     M     G II+  S+ GV G      Y +SK G++G  K+ A E+    
Sbjct: 119 VFNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRN 178
Query: 190 IRVNCVSPYAVSSPM 204
           + VNC++P  + S M
Sbjct: 179 VTVNCIAPGFIESAM 193

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G+ AL+TG  G +GE  AR     GA V +   +++  + +  ++             
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER------IFVF 58
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLVG 129
             +++  + ++     A  + G +DI+ NNAGI  D     + D D   ++ +L+VNL  
Sbjct: 59  PANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED---WDAVLTVNLTS 115
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  T+     M     G II+  S+ GV G      Y +SK G++G  K+ A E+    
Sbjct: 116 VFNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRN 175
Query: 190 IRVNCVSPYAVSSPM 204
           + VNC++P  + S M
Sbjct: 176 VTVNCIAPGFIESAM 190

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 7/198 (3%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGC 67
           S  L+GKVAL+TG    IG   A    + G KV++        ES  E +       +  
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST--ESAEEVVAAIKKNGSDA 81
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
           + V  +V   +DI      AV  +GKLDI+ +N+G+V     ++ D    EF+R+ ++N 
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG--HVKDVTPEEFDRVFTINT 139
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELG 186
            G F   + A + ++  GR  +I   S+ G    V  HA Y+ SK  +    +  A+++ 
Sbjct: 140 RGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197
Query: 187 RFGIRVNCVSPYAVSSPM 204
              I VN V+P  + + M
Sbjct: 198 DKKITVNVVAPGGIKTDM 215

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 73.6 bits (179), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 33/209 (15%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLI--------ADIKDDLGESVCEDIXXXX 61
           +L+G+  LITGGA  +G      F   GAKV +        A+++ D G++V        
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLG------ 55
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNI---LDNDQAE 118
                   +  DV   +D + A +  V+++GK+D +  NAGI D +   +    ++  A 
Sbjct: 56  --------IVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAA 107
Query: 119 FERILSVNLVGAFLGTKHAARVMKPA---GRGSIISTASVCGVIGGVTSHAYTSSKHGVV 175
           F+ +  +N+ G      HA +   PA    RG++I T S  G         YT++KH +V
Sbjct: 108 FDEVFHINVKGYI----HAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIV 163
Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           GL++  A EL  + +RVN V    ++S +
Sbjct: 164 GLVRELAFELAPY-VRVNGVGSGGINSDL 191

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           P    +  L+TGG   IG   A+  +  G KV +                       G  
Sbjct: 11  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSGAPKGLF 56
Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V CDVT    ++ A        G ++++ +NAG+   A   ++   + +FE++++ NL 
Sbjct: 57  GVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEKVINANLT 114
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   + A+R M+    G +I   SV G  G      Y +SK GV+G+ ++ A EL + 
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKA 174
Query: 189 GIRVNCVSPYAVSSPMAK 206
            +  N V+P  + + M +
Sbjct: 175 NVTANVVAPGYIDTDMTR 192

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 73.2 bits (178), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+     +   ED+        G + +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-----DGAAEDLKRVADKVGGTA-L 264
Query: 71  HCDVTKEKDIENAVNTAVSQY--GKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNL 127
             DVT + D  + +   V+++  GK+DI+ NNAGI    +  +L N D+  ++ +++VNL
Sbjct: 265 TLDVTAD-DAVDKITAHVTEHHGGKVDILVNNAGIT---RDKLLANMDEKRWDAVIAVNL 320
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           +     T+           G +I  +S+ G+ G      Y ++K G++GL +  A  L  
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLAD 380
Query: 188 FGIRVNCVSPYAVSSPMAK 206
            GI +N V+P  + + M +
Sbjct: 381 KGITINAVAPGFIETKMTE 399

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 4/184 (2%)
Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVT 75
           ALIT G   +G+         G  V +    D       ++            +V  DVT
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKE--TYKDVEERLQFVQADVT 67
Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
           K++D+   V  A+S +GK+D + NNAG     +  ++D ++ E+  ++  NL   F   K
Sbjct: 68  KKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK 127
Query: 136 HAARVMKPAGRGSIIST--ASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
               VM+    G II+          G +   A+ ++K G+V L K  A E   +GI  N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 194 CVSP 197
            V P
Sbjct: 188 MVCP 191

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDIXXX 60
            Q+   S  L GK A +TGG+  IG   A+  +  GA V +  +   +  ++V  +I   
Sbjct: 20  FQSXXTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA 79
Query: 61  XXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A     +  D    + IE A+   V   G LDI+ N+AGI   A   + +   A+F+
Sbjct: 80  GGRA---VAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFD 134
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTAS-VCGVIGGVTSHAYTSSKHGVVGLMK 179
            + +VN    F+  + A+R +   GR  II+  S +  ++       Y++SK  + GL K
Sbjct: 135 EVXAVNFRAPFVAIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASKAALAGLTK 192
Query: 180 NTAVELGRFGIRVNCVSP 197
             A +LG  GI VN V P
Sbjct: 193 GLARDLGPRGITVNIVHP 210

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           P    +  L+TGG   IG   A+  +  G KV +                       G  
Sbjct: 31  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSGAPKGLF 76
Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DVT    ++ A        G ++++ +NAG+  +A   ++   + +FE++++ NL 
Sbjct: 77  GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLT 134
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   + A+R M+    G +I  ASV G+ G      Y +SK GV+G+ ++ A EL + 
Sbjct: 135 GAFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKA 194
Query: 189 GIRVNCVSPYAVSSPMAK 206
            +  N V+P  + + M +
Sbjct: 195 NVTANVVAPGYIDTDMTR 212

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 50/219 (22%)
Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKV-------------LIADIKDD 48
            Q+ S +P     V L+TGG+  IG    RL ++ G +V             ++A I + 
Sbjct: 20  FQSXSDTP-----VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES 74
Query: 49  LGESVCEDIXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAK 108
            GE+V                +  DV    DI    +    Q+G+LD + NNAGIVD   
Sbjct: 75  GGEAVA---------------IPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVD--Y 117
Query: 109 PNILDNDQAE-FERILSVNLVGAFL----GTKHAARVMKPAGRGSIISTASVCGVIGGVT 163
           P  +D    E  ER L VN+ G+ L      +  +R+    G G+I++ +S   ++G  T
Sbjct: 118 PQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSRLYSGQG-GAIVNVSSXAAILGSAT 176
Query: 164 SHA-YTSSKHGV----VGLMKNTAVELGRFGIRVNCVSP 197
            +  Y +SK  +    +GL +  A E    GIRVN V P
Sbjct: 177 QYVDYAASKAAIDTFTIGLAREVAAE----GIRVNAVRP 211

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANG 66
           S  L GKVAL TG    IG   A    + GA V++         E V  ++      A G
Sbjct: 16  SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQG 73
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
            + +  D++K  ++    + AVS +G LD + +N+G+  E   + L+  Q  F+++ ++N
Sbjct: 74  VA-IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDKVFNLN 130
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVEL 185
             G F   +   +  +  GR  II T+S+  V+ G+ +HA Y  SK  V G  +  AV+ 
Sbjct: 131 TRGQFFVAQQGLKHCRRGGR--IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 188
Query: 186 GRFGIRVNCVSPYAVSSPM 204
           G  G+ VNC++P  V + M
Sbjct: 189 GAKGVTVNCIAPGGVKTDM 207

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 2   LQANSMSP-RLQGK-VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXX 59
           L+A +  P  +Q K VA +TGG G +G   +R    H A + +A    +  + V   +  
Sbjct: 12  LEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRL--HDAGMAVAVSHSERNDHVSTWLMH 69
Query: 60  XXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
                        DV   +  E      ++ +GK+D++ NNAGI  +A    +   + ++
Sbjct: 70  ERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDA--TFMKMTKGDW 127
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           + ++  +L   F  TK     M     G I++  SV G  G      Y S+K G+ G  K
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTK 187
Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAK 206
             A+E  + GI VN VSP  +++ M +
Sbjct: 188 TLALETAKRGITVNTVSPGYLATAMVE 214

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           P    +  L+TGG   IG   A+  +  G KV +                       G  
Sbjct: 11  PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSGAPKGLF 56
Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DVT    ++ A        G ++++ +NAG+   A   ++   + +FE++++ NL 
Sbjct: 57  GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEKVINANLT 114
Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   + A+R M+    G +I   SV G+ G      Y +SK GV+G+ ++ A EL + 
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKA 174
Query: 189 GIRVNCVSPYAVSSPMAK 206
            +  N V+P  + + M +
Sbjct: 175 NVTANVVAPGYIDTDMTR 192

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L GKVA ITG A   G   A   +  GA ++  D+ D +  SV   +      A     V
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIA-SVPYPLATPEELAATVKLV 69
Query: 71  ----------HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                       DV   + +  A+   + + G+LDI+  NAGI     P    +D   + 
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI----APMSAGDDG--WH 123
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIG----GVTSHAYTSSKHGVV 175
            ++ VNL G +   K A   +   G G SI+  +S  G+ G       S  Y ++KHGVV
Sbjct: 124 DVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVV 183
Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           GLM+  A  L    IRVN + P  V +PM
Sbjct: 184 GLMRVYANLLAGQMIRVNSIHPSGVETPM 212

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDIXXXXXXANGCSYVHC 72
           K+A++TG    +G   A   +  G  V +A  + D L E+  E         +    V  
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE-------IGDDALCVPT 81
Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DVT    +       V ++G++D++FNNAG    A P   D   A++++++  NL G FL
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPX-EDLTFAQWKQVVDTNLTGPFL 140
Query: 133 GTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            T+ A RV K   P G G II+  S+        S  YT++KH + GL K+T+++
Sbjct: 141 CTQEAFRVXKAQEPRG-GRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 14/211 (6%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           R + ++AL+TG +G IG   AR   + G KV+         E +  +            Y
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVNLV 128
             CD++ E+DI +  +   SQ+  +DI  NNAG+   A+P+ +L    + ++ + +VN++
Sbjct: 89  -RCDLSNEEDILSMFSAIRSQHSGVDICINNAGL---ARPDTLLSGSTSGWKDMFNVNVL 144
Query: 129 GAFLGTKHAARVMKPAG--RGSIISTASVCG--VIGGVTSHAYTSSKHGVVGLMKNTAVE 184
              + T+ A + MK      G II+  S+ G  V+    +H Y+++K+ V  L +    E
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 204
Query: 185 L--GRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           L   +  IR  C+SP  V +  A    KL D
Sbjct: 205 LREAQTHIRATCISPGVVETQFA---FKLHD 232

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCEDIXXXXXXANGC 67
           RL GKVAL+TG    IG   A    + GAKV++  A+   D  E V  +I      A   
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD-AEKVVSEIKALGSDAIA- 72
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
             +  D+ +  +I    + AV+ +G LDI  +N+G+V     ++ D  + EF+R+ S+N 
Sbjct: 73  --IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFG--HLKDVTEEEFDRVFSLNT 128
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELG 186
            G F   + A R +   GR  I+ T+S       V  H+ Y+ SK  V   ++  + + G
Sbjct: 129 RGQFFVAREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186
Query: 187 RFGIRVNCVSP 197
              I VN V+P
Sbjct: 187 DKKITVNAVAP 197

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           K+ +ITG +  IGE  AR FS+ G  +L+      L   V E +         C+ V  D
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLL------LARRV-ERLKALNLPNTLCAQV--D 67
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA-EFERILSVNLVGAFL 132
           VT +   + A+  A   YG  D + NNAG++   +   +D  +A E++R+  VN++G   
Sbjct: 68  VTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ---IDTQEANEWQRMFDVNVLGLLN 124
Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           G +     MK    G+II+ +S+ G        AY  +K  V  + +N   E+    +RV
Sbjct: 125 GMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRV 184
Query: 193 NCVSPYAVSSPM 204
             ++P AV + +
Sbjct: 185 MTIAPSAVKTEL 196

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+G+ AL+TG    +G+  A   +  GA+V+ A  +    +   + I      A+     
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLID 64
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D    KD       + +  G  DI+ NNAGI+  A  + ++  + +++ ++ VNL   
Sbjct: 65  FADPLAAKD-------SFTDAG-FDILVNNAGIIRRA--DSVEFSELDWDEVMDVNLKAL 114
Query: 131 FLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           F  T+  A+ +   GR G +++ AS+    GG+   +YT++KHGV GL K  A E    G
Sbjct: 115 FFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKG 174
Query: 190 IRVNCVSP 197
           I VN ++P
Sbjct: 175 INVNAIAP 182

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           L   SMS  LQGKVAL+TG +  IG+  A    + GA V+         E + E +    
Sbjct: 18  LYFQSMS--LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLK--- 72
Query: 62  XXANGC--SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
             ANG   + +  DV+ ++ +   +       G+  I+ NNAGI  +     + +D  E+
Sbjct: 73  --ANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDD--EW 128
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
             +++ NL   +  +K   R M  A  G II+  SV G +G      Y ++K G+ G  +
Sbjct: 129 FDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTR 188
Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAK 206
             A E+G   I VN V+P  + + M +
Sbjct: 189 ALAREVGSRAITVNAVAPGFIDTDMTR 215

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           LQG+  ++TGG   IG   A +F++ GA V +A       ++   D+      +     V
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL--DQLGSGKVIGV 65
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV+     +     AV ++G +D++  NAG+  +A    +  +Q     I +VN+ G 
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQ--LNGIFAVNVNGT 123
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELGRFG 189
           F   +     +  +G G ++ T+S+ G I G    + Y ++K   +G M+  A+EL    
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHK 183
Query: 190 IRVNCVSPYAVSSPMAKGFLK 210
           I VN + P  +   M +G L+
Sbjct: 184 ITVNAIMPGNI---MTEGLLE 201

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESV--CEDIXXXXXXANGC 67
           + G++ LITG    IG   A  F+K  +K+++ DI K  L E+   C+ +      A   
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----GAKVH 83
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
           ++V  D +  +DI ++     ++ G + I+ NNAG+V  +  ++      + E+   VN+
Sbjct: 84  TFV-VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNV 140
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
           +  F  TK     M     G I++ AS  G +      AY SSK   VG  K    EL  
Sbjct: 141 LAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 200
Query: 188 F---GIRVNCVSPYAVSSPMAKGFLK 210
               G++  C+ P  V++    GF+K
Sbjct: 201 LQITGVKTTCLCPNFVNT----GFIK 222

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 15/202 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY- 69
           LQG+VA++TGGA  IG+   +   + G+ V+IA  K +  +S  +++             
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 70  -VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG--IVDEAKPNILDNDQAEFERILSVN 126
            + C++  E+++ N V + +  +GK++ + NN G   +  A+          +  +L  N
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAE----HISSKGWHAVLETN 131
Query: 127 LVGAFLGTKHA-ARVMKPAGRGSIIS--TASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           L G F   K   +  MK  G GSI++    +  G    V S A   ++ GV  L K+ A+
Sbjct: 132 LTGTFYMCKAVYSSWMKEHG-GSIVNIIVPTKAGFPLAVHSGA---ARAGVYNLTKSLAL 187
Query: 184 ELGRFGIRVNCVSPYAVSSPMA 205
           E    GIR+NCV+P  + S  A
Sbjct: 188 EWACSGIRINCVAPGVIYSQTA 209

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY-VHC 72
           KV LITGG+  IG  +A L ++ G  V +    +    +  +++      A G +  V  
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNS---AAADEVVRQIREAGGQALAVQA 82
Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAF 131
           DV KE+++     T  +Q G+L  + NNAG+VD+     +D    E  +R   +N+ G+F
Sbjct: 83  DVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTR--VDGITLERLQRXFEINVFGSF 140
Query: 132 LGTKHAARVMKPAGR-----GSIISTASVCGVIGGVTSHA-YTSSKHGV----VGLMKNT 181
           L  + A  V + + R     GSI++ +S    +G    +  Y ++K  +    +GL K  
Sbjct: 141 LCAREA--VKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEV 198
Query: 182 AVELGRFGIRVNCVSP 197
           A E    GIRVN V P
Sbjct: 199 ATE----GIRVNAVRP 210

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCEDIXXXXXXANGC 67
           RL GKVAL+TG    IG   A    + GAKV++  A+   D  E V  +I      A   
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD-AEKVVSEIKALGSDAIA- 72
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
             +  D+ +  +I    + AV+ +G LDI  +N+G+V     ++ D  + EF+R+ S+N 
Sbjct: 73  --IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFG--HLKDVTEEEFDRVFSLNT 128
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELG 186
            G F   + A R +   GR  I+ T+S       V  H+ ++ SK  V   ++  + + G
Sbjct: 129 RGQFFVAREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCG 186
Query: 187 RFGIRVNCVSP 197
              I VN V+P
Sbjct: 187 DKKITVNAVAP 197

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGE---SVCEDIXXXXXXANG 66
           + GKVA+ITG +  IG   A  F+K GA  VL+A   D L E   S+ E           
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLE--- 61
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DV   + ++  V +  S +G  DI+ NNAG    +   I++    +++    ++
Sbjct: 62  ---VAVDVATPEGVDAVVESVRSSFGGADILVNNAG--TGSNETIMEAADEKWQFYWELH 116
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           ++ A    +     M+  G G+II  AS+C V        Y  +K  ++   K  A E+ 
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 187 RFGIRVNCVSPYAVSSP 203
           +  IRVNC++P  + +P
Sbjct: 177 KDNIRVNCINPGLILTP 193

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           + AL+TGG+  IG   A      G +V IA       E   + +        G   +  D
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSL--------GAVPLPTD 51
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           + K+ D +  V  A+   G L ++ + A  V+  KP  L+    E+ R+L ++L  AFL 
Sbjct: 52  LEKD-DPKGLVKRALEALGGLHVLVHAAA-VNVRKPA-LELSYEEWRRVLYLHLDVAFLL 108
Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGG--VTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
            + AA  M  AG G ++   SV     G  V   AYT++K  ++GL +  A E  R GIR
Sbjct: 109 AQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIR 168
Query: 192 VNCVSP 197
           VN + P
Sbjct: 169 VNLLCP 174

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           R Q KV +ITG +  IG    R +     +V+       +  S   DI            
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVAT--SRSIKPSADPDIHT---------- 72
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  D++K +  +  V   + ++G++D + NNAG+   AKP  ++  Q +++  L VN+ G
Sbjct: 73  VAGDISKPETADRIVREGIERFGRIDSLVNNAGVF-LAKP-FVEXTQEDYDHNLGVNVAG 130
Query: 130 AFLGTKHAARVMKPAGRGSIIS--TASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            F  T+ AA      G G I+S  T+ V     G  S   + +K G+  + ++ A E  R
Sbjct: 131 FFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSR 190
Query: 188 FGIRVNCVSPYAVSSP 203
            G+RVN VSP  + +P
Sbjct: 191 SGVRVNAVSPGVIKTP 206

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 84  VNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMK 142
           V+ A    G LD + NNAGI  D     + D D   +E +L  NL   F  T+ A ++M 
Sbjct: 71  VHQAAEVLGGLDTLVNNAGITRDTLLVRMKDED---WEAVLEANLSAVFRTTREAVKLMM 127
Query: 143 PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS 202
            A  G I++  SV G++G      Y +SK G++G  +  A E  + GI VN V+P  + +
Sbjct: 128 KARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIET 187
Query: 203 PMAK 206
            M +
Sbjct: 188 EMTE 191

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  ++ L+TG +  IG  AA  ++++GA V++    ++    V   I            +
Sbjct: 12  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  +D +         Y +LD + +NAG++ +  P + + D   ++ ++ VN+   
Sbjct: 72  DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQDPQVWQDVMQVNVNAT 130
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ T+    ++  +  GS++ T+S  G  G     AY +SK    G+M+  A E  +  +
Sbjct: 131 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 189
Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
           RVNC++P    + M       +D
Sbjct: 190 RVNCINPGGTRTAMRASAFPTED 212

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDIXXXXXX 63
           N  SP     VALITG    IG   A   +  G  V  +   + ++ E V ++I      
Sbjct: 25  NQPSP-----VALITGAGSGIGRATALALAADGVTVGALGRTRTEV-EEVADEIVGAGGQ 78
Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           A     +  DV+ E    NAV   V ++G LDI+  NAGI     P I D    E++  +
Sbjct: 79  AIA---LEADVSDELQXRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETI 134
Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV--VGLMKNT 181
           +VNL G FL        +K  G G+I+  +S+ G     T  A   +      V +++  
Sbjct: 135 AVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQL 194
Query: 182 AVELGRFGIRVNCVSPYAVSS 202
           A+ELG+  IRVN V P A+ +
Sbjct: 195 ALELGKHHIRVNAVCPGAIET 215

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  ++ L+TG +  IG  AA  ++++GA V++    ++    V   I            +
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++ +      V  Y +LD + +NAG++ +  P    N Q  ++ ++ +N+   
Sbjct: 68  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQV-WQDVMQINVNAT 126
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ T+    ++  +  GS++ T+S  G  G     AY +SK    G+M+  A E  +  +
Sbjct: 127 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 185
Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
           RVNC++P    + M       +D
Sbjct: 186 RVNCINPGGTRTAMRASAFPTED 208

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+G  AL+TGG+  IG       +  GA+V      +   +   E          G    
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV-- 76
Query: 71  HCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIV--DEAKPNILDNDQAEFERILSVNL 127
            CD+    + +  + T    + GKL+I+ NNAG+V   EAK    D  + ++  I+  N 
Sbjct: 77  -CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAK----DFTEKDYNIIMGTNF 131
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
             A+  ++ A  ++K +  G++I  +S+ G     +   Y++SK  +  + K+ A E  +
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAK 191
Query: 188 FGIRVNCVSPYAVSSPMAKGFLK 210
             IRVN V+P  + +P+ +  +K
Sbjct: 192 DNIRVNSVAPGVILTPLVETAIK 214

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGE---SVCEDIXXXXXXANG 66
           + GKVA+ITG +  IG   A  F+K GA  VL+A   D L E   S+ E           
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLE--- 61
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DV   + ++  V +  S +G  DI+ NNAG    +   I++    +++    + 
Sbjct: 62  ---VAVDVATPEGVDAVVESVRSSFGGADILVNNAG--TGSNETIMEAADEKWQFYWELL 116
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           ++ A    +     M+  G G+II  AS+C V        Y  +K  ++   K  A E+ 
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 187 RFGIRVNCVSPYAVSSP 203
           +  IRVNC++P  + +P
Sbjct: 177 KDNIRVNCINPGLILTP 193

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVH 71
           +G++AL+TGG   +G   A+  S  G  V+I   + D+ ++   +I       N    V 
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI--GGRTGNIVRAVV 89
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER---ILSVNLV 128
           CDV     +        +++ +LD++ NNAG      P  L  ++  FE+   I++ NL 
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAG--SNVPPVPL--EEVTFEQWNGIVAANLT 145
Query: 129 GAFLGTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           GAFL T+HA R  K   P G G II+  S+        S  YT++KH + GL K+TA++
Sbjct: 146 GAFLCTQHAFRXXKAQTPRG-GRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALD 203

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
           L   S + RL  K+A+ITG    IG  AA+ F   GA+V I   + D+ ++   +I    
Sbjct: 18  LYFQSXTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---- 73
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
               G   +  D     +++       ++ G++D++F NAG    +   + +  + +++ 
Sbjct: 74  --GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAG--GGSXLPLGEVTEEQYDD 129
Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
               N+ G     + A  ++    RG S++ T S  G  G      Y +SK  +    +N
Sbjct: 130 TFDRNVKGVLFTVQKALPLL---ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARN 186
Query: 181 TAVELGRFGIRVNCVSP 197
             ++L   GIR+N +SP
Sbjct: 187 WILDLKDRGIRINTLSP 203

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  ++ L+TG +  IG  AA  ++++GA V++    ++    V   I            +
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++ +         Y +LD + +NAG++ +  P    N Q  ++ ++ VN+   
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQV-WQDVMQVNVNAT 128
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+ T+    ++  +  GS++ T+S  G  G     AY +SK    G+M+  A E  +  +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187
Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
           RVNC++P    + M       +D
Sbjct: 188 RVNCINPGGTRTAMRASAFPTED 210

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           LQ ++ L+TG +  IG  AA  ++++GA V++    ++    V + I            +
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++     +   + Y +LD + +NAG++ E  P   + D   ++ +  VN+   
Sbjct: 73  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXS-EQDPQIWQDVXQVNVNAT 131
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  T+    ++  +  GS++ T+S  G  G     AY +SK    G  +  A E     +
Sbjct: 132 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSL 191
Query: 191 RVNCVSP 197
           RVNC++P
Sbjct: 192 RVNCINP 198

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           RL G  A +TG    IG    R F+  GA++++ D      E+   D       A   + 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILID-----REAAALDRAAQELGAAVAAR 62
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DVT + +   A          + I+ N+AGI      + L+ D A + ++++VN+ G
Sbjct: 63  IVADVT-DAEAMTAAAAEAEAVAPVSILVNSAGIAR--LHDALETDDATWRQVMAVNVDG 119
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA--YTSSKHGVVGLMKNTAVELGR 187
            F  ++   R M   G G+I++  S+ G I      A  Y +SK  V  L +  A E   
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAG 179
Query: 188 FGIRVNCVSPYAVSSPM 204
            G+RVN ++P  V++ M
Sbjct: 180 RGVRVNALAPGYVATEM 196

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M   LQGKVALITG +  IGE  AR  +  GA V IA  + +   ++ +++       + 
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVH- 59
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  DV   + ++ AV + V   G LDI+ NNAGI+      + D D  ++ R++  N
Sbjct: 60  --VLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP--VEDADTTDWTRMIDTN 115
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L+G    T+ AA       +G+++  +S+ G +    +  Y ++K GV    +    E+ 
Sbjct: 116 LLGLMYMTR-AALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174
Query: 187 RFGIRVNCVSP 197
             G+RV  + P
Sbjct: 175 ERGVRVVVIEP 185

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXX 61
            Q+N+MS     +  L+TG +  IG   AR  +  G  + +   +D  G    E +    
Sbjct: 20  FQSNAMS-----RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQ--ETLNAIV 72
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
                   +  DV   +     +   ++Q+G    + +NAGI  +A    L ND  +++ 
Sbjct: 73  ANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSND--DWDA 130
Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           ++  NL   +   +     M  A +G  II+ +SV GV+G      Y+++K G++G  K 
Sbjct: 131 VIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKA 190
Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A+EL +  I VNC++P  + + M
Sbjct: 191 LAIELAKRKITVNCIAPGLIDTGM 214

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIA--DIKD------DLGESVCEDIXXXX 61
           RL GK ALITG    IG   AR F+  GA+++++  D+ +       LGE    D+    
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHT-- 74
Query: 62  XXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
                   V  D+ +          A   +G LD++ NNAGI    +P ++D D   F+ 
Sbjct: 75  --------VAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGI-SHPQP-VVDTDPQLFDA 124
Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKN 180
            ++VNL    L      + M  AG G  I T +    +  +  H AY +SK G+V   K 
Sbjct: 125 TIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKV 184
Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAK 206
            A ELG  GIR N V P  V + M +
Sbjct: 185 LARELGPHGIRANSVCPTVVLTEMGQ 210

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-----DIKDDLGESVCEDIXXXXXXAN 65
           L+G  AL+TGG+  IG       +  GA V        ++ D L +   +          
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 63
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIV--DEAKPNILDNDQAEFERI 122
                 CD++   + +  +NT  + + GKL+I+ NNAGIV   EAK    D    ++  I
Sbjct: 64  ------CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAK----DYTVEDYSLI 113
Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           +S+N   A+  +  A   +K + RG+++  +SV G +       Y ++K  +  L +  A
Sbjct: 114 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 173
Query: 183 VELGRFGIRVNCVSPYAVSSPMAK 206
            E  +  IRVN V P  +++ + +
Sbjct: 174 FEWAKDNIRVNGVGPGVIATSLVE 197

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-----DIKDDLGESVCEDIXXXXXXAN 65
           L+G  AL+TGG+  IG       +  GA V        ++ D L +   +          
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV-- 64
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIV--DEAKPNILDNDQAEFERI 122
                 CD++   + +  +NT  + + GKL+I+ NNAGIV   EAK    D    ++  I
Sbjct: 65  ------CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAK----DYTVEDYSLI 114
Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           +S+N   A+  +  A   +K + RG+++  +SV G +       Y ++K  +  L +  A
Sbjct: 115 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLA 174
Query: 183 VELGRFGIRVNCVSPYAVSSPMAK 206
            E  +  IRVN V P  +++ + +
Sbjct: 175 FEWAKDNIRVNGVGPGVIATSLVE 198

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
            +Y+  ++  +    +AV   ++ +G+LD + NNAG+ D      LD  +  F   L  N
Sbjct: 57  ATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG---LDAGRDAFVASLERN 113
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L+  +    +    +K A RG+I++ +S   V G   +  Y +SK   + L +  AV L 
Sbjct: 114 LIHYYAMAHYCVPHLK-ATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALR 172
Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             G+RVN V P  V +P+ + ++   +D
Sbjct: 173 EHGVRVNAVIPAEVMTPLYRNWIATFED 200

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS- 68
           RL+ + AL+TGG   IG  AA  +++ GA V I  +  +      ED          C  
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE-----EEDAQQVKALIEECGR 100
Query: 69  ---YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               +  D++ E    + V+ A    G LDI+   AG    A P I D    +F++  +V
Sbjct: 101 KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAG-KQTAIPEIKDLTSEQFQQTFAV 159
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+   F  T+ A  ++ P G  SII+T+S+           Y ++K  ++   +  A ++
Sbjct: 160 NVFALFWITQEAIPLL-PKG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217
Query: 186 GRFGIRVNCVSP 197
              GIRVN V+P
Sbjct: 218 AEKGIRVNIVAP 229

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVL--------IADIKDDLGESVCEDIXXXXXX 63
           QGK A++ GG    G    R   + GA+VL        IA I+++ G  V          
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRV---------- 56
Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERI 122
                 +  D+    +I      A    G +D++  NAG V E +P   D   +A ++R 
Sbjct: 57  ----HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAG-VSELEP--FDQVSEASYDRQ 109
Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            +VN  GAF   +    +++  G  SI+ T+SV    G      Y++SK  +V      A
Sbjct: 110 FAVNTKGAFFTVQRLTPLIREGG--SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLA 167
Query: 183 VELGRFGIRVNCVSPYAVSSP 203
            EL   GIRVN VSP  + +P
Sbjct: 168 AELLPRGIRVNSVSPGFIDTP 188

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVL--------IADIKDDLGESVCEDIXXXXXX 63
           QGK A++ GG    G    R   + GA+VL        IA I+++ G  V          
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRV---------- 55
Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERI 122
                 +  D+    +I      A    G +D++  NAG V E +P   D   +A ++R 
Sbjct: 56  ----HALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAG-VSELEP--FDQVSEASYDRQ 108
Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            +VN  GAF   +    +++  G  SI+ T+SV    G      Y++SK  +V      A
Sbjct: 109 FAVNTKGAFFTVQRLTPLIREGG--SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLA 166
Query: 183 VELGRFGIRVNCVSPYAVSSP 203
            EL   GIRVN VSP  + +P
Sbjct: 167 AELLPRGIRVNSVSPGFIDTP 187

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY--V 70
           G+ A +TGGA  +G    R     G KV IADI+ D   S+ + +       +G     V
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQD---SIDKALATLEAEGSGPEVMGV 64
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV   +  + A +   +++G + I+ NNAG V+  +P I ++   +++ +L VNL G 
Sbjct: 65  QLDVASREGFKMAADEVEARFGPVSILCNNAG-VNLFQP-IEESSYDDWDWLLGVNLHGV 122
Query: 131 FLG-TKHAARVMK--PAGR---GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             G T    R+++   AG    G +++TAS+   +   +   Y ++K  V GL ++    
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYS 182
Query: 185 LGRFGIRVNCVSPYAVSS 202
           L ++ I V+ + P  V S
Sbjct: 183 LLKYEIGVSVLCPGLVKS 200

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 5/187 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  KVAL+TG +  IG   A   +  GA V+         E            A G    
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+   + I+N      ++   +DI+ NNAGI  +        D  E++ +++ NL   
Sbjct: 63  ISDI---ESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSED--EWQSVINTNLSSI 117
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  +K   R       G IIS  SV G  G      Y ++K GV+G  K+ A E+    I
Sbjct: 118 FRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNI 177
Query: 191 RVNCVSP 197
            VN V+P
Sbjct: 178 TVNVVAP 184

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVTK 76
           L+TGG+  IG+    L  ++    +I     D+ +S           A    ++  D+TK
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVI---NIDIQQSFS---------AENLKFIKADLTK 55
Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
           ++DI N ++  + +    D +F NAGI+   K +I D D    +++L +N+  +    K 
Sbjct: 56  QQDITNVLD--IIKNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLDLNVWSSIYFIKG 111
Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
               +K     SI+   S    I    S AYT SK  +    K+ A++L ++ IRVN V 
Sbjct: 112 LENNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVC 169
Query: 197 PYAVSSPMAKGFLK 210
           P  V + + +  ++
Sbjct: 170 PGTVDTDLYRNLIQ 183

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           LQGKVALITG +  IGE  AR  +  GA V IA  + +   ++ +++       +    +
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVH---VL 61
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV   + ++ AV + V   G LDI+ NNAGI       + D D  ++ R +  NL+G 
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGP--VEDADTTDWTRXIDTNLLGL 119
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
              T+ AA       +G+++  +S+ G +    +  Y ++K GV    +    E+   G+
Sbjct: 120 XYXTR-AALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 191 RVNCVSP 197
           RV  + P
Sbjct: 179 RVVVIEP 185

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M     G  AL+TG    IG    +     GAKV+     +        D+        G
Sbjct: 1   MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN-------SDLVSLAKECPG 53
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  D+       +A   A+   G +D++ NNA +V   +P  L+  +  F+R  SVN
Sbjct: 54  IEPVCVDLGDW----DATEKALGGIGPVDLLVNNAALVI-MQP-FLEVTKEAFDRSFSVN 107
Query: 127 LVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L   F  ++  AR M   G  GSI++ +S+   +       Y+S+K  +  L K  A+EL
Sbjct: 108 LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMEL 167
Query: 186 GRFGIRVNCVSPYAVSSPMAK 206
           G   IRVN V+P  V + M K
Sbjct: 168 GPHKIRVNSVNPTVVLTDMGK 188

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXX 60
           ML  NS     QGKVA ITGG   +G+    L S  GA+ +IA  K D+ ++  E I   
Sbjct: 18  MLPPNS----FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQI--S 71
Query: 61  XXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDND 115
               N    + CDV     ++N V+  +   G  +I+ NNA        +   PN     
Sbjct: 72  SQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN----- 126
Query: 116 QAEFERILSVNLVG-AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV 174
              ++ I  + L G AF+  +   +++K     + +S  ++    G        S+K GV
Sbjct: 127 --AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGV 184
Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLD 212
             + K+ A E G++G+R N + P  + +  A  F +LD
Sbjct: 185 EAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA--FSRLD 220

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 11  LQGKVALITGGAGS--IGECAARLFSKHGAKVLIADIKDDLG--ESVCEDIXXXXXXANG 66
           L+GKV ++TG +G   +G  AAR  ++ GA V I       G  E+V E        A  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
                C V   +  E  V   V+ +G++D    NAG    A   ILD     +  ++ V+
Sbjct: 78  ---YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGAT--ADSGILDGSVEAWNHVVQVD 132
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH--AYTSSKHGVVGLMKNTAVE 184
           L G F   K      K  G GS++ TAS+ G I        +Y  +K G + + ++ A E
Sbjct: 133 LNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192
Query: 185 LGRFGIRVNCVSP 197
              F  RVN +SP
Sbjct: 193 WRDFA-RVNSISP 204

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA--DIKD-DLGESVCEDIXXXXXXANGC 67
           L+ KV +I GG  ++G   A+ F+     +++     KD D    + +++          
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK---V 65
Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
           +    D++ E+++    + A  ++GK+DI  N  G V   K  I++  +AEF+ + ++N 
Sbjct: 66  ALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKV--LKKPIVETSEAEFDAMDTINN 123
Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
             A+   K AA+ M P G    I+T+ +    G  ++  Y  +K  V    +  + EL +
Sbjct: 124 KVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYST--YAGNKAPVEHYTRAASKELMK 181
Query: 188 FGIRVNCVSPYAVSSPMAKGFL 209
             I VN ++P     PM   F 
Sbjct: 182 QQISVNAIAP----GPMDTSFF 199

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV--CEDIXXXXXXANGCSYVH 71
           ++A +TGG G IG    +   K G +V +A    +    V   ED       A G  +  
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRVKWLED-----QKALGFDFYA 67
Query: 72  CD--VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            +  V      + A +   ++ G++D++ NNAGI  +     +  +  +++ ++  NL  
Sbjct: 68  SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTRE--DWQAVIDTNLTS 125
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  TK     M   G G II+ +SV G  G      Y+++K G+ G   + A E+   G
Sbjct: 126 LFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKG 185
Query: 190 IRVNCVSPYAVSSPMAK 206
           + VN VSP  + + M K
Sbjct: 186 VTVNTVSPGYIGTDMVK 202

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 7/202 (3%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           R   +  ++ G    IG   A  F++ GA V++    +   E     +            
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVL--TYNGAAEGAATAVAEIEKLGRSALA 62
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  D+T   ++E A++ A  ++G++  + + AG +  A+  I + D+A + ++L VNL  
Sbjct: 63  IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLI-ARKTIAEMDEAFWHQVLDVNLTS 121
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVI-GGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            FL  K A  + K A  G+I++ +S  G   GG  + AY +SK  V+   +  A E+G  
Sbjct: 122 LFLTAKTA--LPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP- 178
Query: 189 GIRVNCVSPYAVSSPMAKGFLK 210
            IRVN V P  +S+     F K
Sbjct: 179 KIRVNAVCPGMISTTFHDTFTK 200

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKV-LIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           Q  +A+ITG +  IG   A   +  G +V LIA  K +L E V ++I            +
Sbjct: 6   QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL-EKVHDEIXRSNKHVQEPIVL 64
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-IVDEAKPNILDNDQAEFERILSVNLVG 129
             D+T     +  +     +YG +DI+ N A    D +    +DN    F +I  +N++ 
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDN----FRKIXEINVIA 120
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            +   K    + K    G I + AS     G      Y S+K  ++GL ++   EL   G
Sbjct: 121 QYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLG 180
Query: 190 IRVNCVSPYAVSSPMAK 206
           IRV  + P  V++  AK
Sbjct: 181 IRVTTLCPGWVNTDXAK 197

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           + G+V ++TG +  IG   A    K GA V I     D    V ++          C  V
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQE---AQSLGGQCVPV 59
Query: 71  HCDVTKEKDIENAVNTA-VSQYGKLDIMFNNA-----GIVDEAKPNILDNDQAEFERILS 124
            CD ++E ++ +        Q G+LD++ NNA      I++       +   + ++ I +
Sbjct: 60  VCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINN 119
Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           V L G +  + + AR+M PAG+G I+  +S  G +  + +  Y   K     L  + A E
Sbjct: 120 VGLRGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHE 178
Query: 185 LGRFGIRVNCVSPY 198
           L R G  V+CVS +
Sbjct: 179 LRRHG--VSCVSLW 190

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  ++ L+TG +  IG  AA  ++++GA V++    ++    V   I            +
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++ +         Y +LD + +NAG++ +  P    N Q  ++ +  VN+   
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQV-WQDVXQVNVNAT 128
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  T+    ++  +  GS++ T+S  G  G     AY +SK    G  +  A E  +  +
Sbjct: 129 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQ-RL 187
Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
           RVNC++P    + M       +D
Sbjct: 188 RVNCINPGGTRTAMRASAFPTED 210

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 2/187 (1%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L  ++ L+TG +  IG  AA  ++++GA V++    ++    V   I            +
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
                  ++ +      V  Y +LD + +NAG++ +  P    N Q  ++ +  +N+   
Sbjct: 91  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQV-WQDVXQINVNAT 149
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  T+    ++  +  GS++ T+S  G  G     AY +SK    G  +  A E  +  +
Sbjct: 150 FXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQ-RL 208
Query: 191 RVNCVSP 197
           RVNC++P
Sbjct: 209 RVNCINP 215

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+ KVA+ITG +  IGE  AR  ++ G  + +     D  E +  ++           Y 
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYH 79
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
           H DV+K + +E      + ++G +D++  NAG+    +  + +  + EF  ++ VNL+G 
Sbjct: 80  HLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR--LEELSEEEFHEMIEVNLLGV 137
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVI---GGVTSHAYTSSKHGVVGLMKNTAVE--- 184
           +   K     +K  G  ++++T+ V   +   GG     Y S+K     L++   +E   
Sbjct: 138 WRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGG----GYVSTKWAARALVRTFQIENPD 193
Query: 185 LGRFGIRVNCVSPYAVSS----PMAKGFLKLDD 213
           +  F +R   V  Y   S    P  KG+LK D+
Sbjct: 194 VRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDE 226

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXAN 65
           SM   L  KV +I+G   ++G   AR  ++ GA +++A    +  E V + +      A 
Sbjct: 4   SMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRAL 63
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER-ILS 124
               V  D+T +  + + V+  +  YG++D++ NNA  V   KP    N   E  R  + 
Sbjct: 64  S---VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP--FANTTFEHMRDAIE 118
Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           + + GA    +     ++ + +G++++  S+          AY  +K  ++ + +  A E
Sbjct: 119 LTVFGALRLIQGFTPALEES-KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATE 177
Query: 185 LGRFGIRVNCVSP 197
           LG  GIRVN V P
Sbjct: 178 LGEKGIRVNSVLP 190

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXAN 65
           SM    Q +  L+TGG   IG+  A      GA V+I     D      +++        
Sbjct: 4   SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGG 63
Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
              Y   D+T E +   AV+   + +G+L  + + AG  +   P I   D   + R + +
Sbjct: 64  AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDL 122
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+ G     KHAAR M   G GS +  +S+          AY  +K  V  LM+  A EL
Sbjct: 123 NVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADEL 182
Query: 186 GRFGIRVNCVSP 197
           G   +RVN + P
Sbjct: 183 GASWVRVNSIRP 194

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANG 66
           M P L+GK  LITG +  IG   ARLF++ GAKV +   K     ++ E I         
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAP--ANIDETIASMRADGGD 58
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
            ++   D+   +  +  V+  V+++G +D++ NNAG +   KP + + D   ++ ++  N
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKP-LPEIDDTFYDAVMDAN 117
Query: 127 LVGAFLGTK----HAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +    + TK    H A   K +G+ S +IST S+ G  GG        +    +  +   
Sbjct: 118 IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKN 177
Query: 182 AVEL-GRFGIRVNCVSPYAVSS 202
            V+   + G+R N VSP  V +
Sbjct: 178 WVDFHTKDGVRFNIVSPGTVDT 199

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 2   LQANSMSPR-LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXX 60
           LQ   + P   QGKVA ITGG   +G+    L S  GA+ +IA  K D+ ++  E I   
Sbjct: 14  LQKAXLPPNSFQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQI--S 71
Query: 61  XXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDND 115
               N    + CDV     ++N V+  +   G  +I+ NNA        +   PN     
Sbjct: 72  SQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN----- 126
Query: 116 QAEFERILSVNLVG-AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV 174
              ++ I  + L G AF+  +   +++K     + +S  ++    G        S+K GV
Sbjct: 127 --AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGV 184
Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLD 212
               K+ A E G++G R N + P  + +  A  F +LD
Sbjct: 185 EAXSKSLAAEWGKYGXRFNVIQPGPIKTKGA--FSRLD 220

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD 73
           KVA+ITG +  IGE  AR  ++ G  + +     D  E +  ++           Y H D
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHHLD 60
Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V+K + +E      + ++G +D++  NAG+       + +  + EF  ++ VNL+G +  
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEELSEEEFHEMIEVNLLGVWRT 118
Query: 134 TKHAARVMKPAGRGSIISTASVCGVI---GGVTSHAYTSSKHGVVGLMKNTAVE---LGR 187
            K     +K  G  ++++T+ V   +   GG     Y S+K     L++   +E   +  
Sbjct: 119 LKAFLDSLKRTGGLALVTTSDVSARLIPYGG----GYVSTKWAARALVRTFQIENPDVRF 174
Query: 188 FGIRVNCVSPYAVSS----PMAKGFLKLDD 213
           F +R   V  Y   S    P  KG+LK D+
Sbjct: 175 FELRPGAVDTYFGGSKPGKPKEKGYLKPDE 204

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 92/225 (40%), Gaps = 32/225 (14%)
Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV--------CEDIXXXX 61
           R+Q KV L+TGGA   G   A   ++ GA +++ DI  D+  +          E+     
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 62  XXANGCSYV-HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                 +Y    DV     +   +  AV+++GKLD++  NAGI     P         F 
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC----PLGAHLPVQAFA 122
Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------GGVTSHAYTS 169
               V+ VG  + T HAA     +G  SII+T SV G+I            G     Y+ 
Sbjct: 123 DAFDVDFVGV-INTVHAALPYLTSG-ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSY 180
Query: 170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAV------SSPMAKGF 208
           +K  V       A +L    IR N + P  V      S+PM + F
Sbjct: 181 AKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQF 225

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 5/191 (2%)
Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDV 74
           VA++TGG   IG   AR  +  G  + I  I D   E V   I           ++  D+
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGD--AEGVAPVIAELSGLGARVIFLRADL 88
Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT 134
                 +  V+  V+++G++D + NNAGI    + + LD     F+ I+ VNL G    T
Sbjct: 89  ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFT 148
Query: 135 K---HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           +    A          SII+  SV  V        Y  SK G+    +  A+ L   GI 
Sbjct: 149 QAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIA 208
Query: 192 VNCVSPYAVSS 202
           V  V P  + S
Sbjct: 209 VFEVRPGIIRS 219

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  D++   D+       V +YG +D + NNAG+       + D  + +F+  ++ NL G
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTNLKG 120
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  T+    +M+    G I    SV        S  Y  SK G  GL++   +   +  
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180
Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           +R+  V P AV +PM   + K+DD+
Sbjct: 181 VRITDVQPGAVYTPM---WGKVDDE 202

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDIXXXXXXANGCSY 69
           L G+  L+TG    IG    +     GA+V+ ++  + DL   V E           C  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-----------CPG 53
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +        D E A   A+   G +D++ NNA  V   +P  L+  +  F+R   VNL  
Sbjct: 54  IEPVCVDLGDWE-ATERALGSVGPVDLLVNNAA-VALLQP-FLEVTKEAFDRSFEVNLRA 110
Query: 130 AFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELGR 187
               ++  AR +   G  G+I++ +S C     VT+H+ Y S+K  +  L K  A+ELG 
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSSQCSQ-RAVTNHSVYCSTKGALDMLTKVMALELGP 169
Query: 188 FGIRVNCVSPYAVSSPMAK 206
             IRVN V+P  V + M +
Sbjct: 170 HKIRVNAVNPTVVMTSMGQ 188

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 11/201 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L G++AL+TGG+  IG+  A+   + GA+V I   +D      C D          C  +
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICA-RD---AEACADTATRLSAYGDCQAI 82
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D++ E               +LDI+ NNAG    A   +     + +E+++ +N+   
Sbjct: 83  PADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA--LESYPVSGWEKVMQLNVTSV 140
Query: 131 FLGTKHAARVMKPAGRGS----IISTASVCGVIG-GVTSHAYTSSKHGVVGLMKNTAVEL 185
           F   +    +++ +        +I+  SV G+   G  ++AY  SK  +  L +  A EL
Sbjct: 141 FSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200
Query: 186 GRFGIRVNCVSPYAVSSPMAK 206
               I VN ++P    S M +
Sbjct: 201 VGEHINVNVIAPGRFPSRMTR 221

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC-EDIXXXXXXANGCSYV-H 71
           KVA++TG +  IG   A   +  G  V+I    +  G++   E++      A G +    
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVI----NYAGKAAAAEEVAGKIEAAGGKALTAQ 83
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DV+    +     TA   +G +D++ NNAGI       I +   A F+R+++VNL G F
Sbjct: 84  ADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXP--LTTIAETGDAVFDRVIAVNLKGTF 141
Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
              + AA+ ++  GR    ST+ V G++   +   Y ++K GV       + EL    I 
Sbjct: 142 NTLREAAQRLRVGGRIINXSTSQV-GLL-HPSYGIYAAAKAGVEAXTHVLSKELRGRDIT 199
Query: 192 VNCVSP 197
           VN V+P
Sbjct: 200 VNAVAP 205

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 7   MSPR---LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIX 58
           + PR   ++   A++TG A  IG   A    + G +V+I     A+    L + + ++  
Sbjct: 14  LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE-- 71
Query: 59  XXXXXANGCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-- 112
                +N       D+T    +    E  +N+    +G+ D++ NNA       P  L  
Sbjct: 72  ----RSNTAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQ 124
Query: 113 ----DND-----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIG 160
               DN      + +   ++  N +  FL T   A+  K   P    S +S  ++C  + 
Sbjct: 125 GDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV 184
Query: 161 GVTSHA---YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
                A   Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 185 DQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIXXXXXXAN 65
           ++   A++TG A  IG   A    + G +V+I     A+    L + + ++       +N
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 54
Query: 66  GCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL------DND 115
                  D+T    +    E  +N+    +G+ D++ NNA       P  L      DN 
Sbjct: 55  TAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQGDHEDNS 111
Query: 116 -----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHA- 166
                + +   ++  N +  FL T   A+  K   P    S +S  ++C  +      A 
Sbjct: 112 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAF 171
Query: 167 --YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
             Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 214

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIXXXXXXAN 65
           ++   A++TG A  IG   A    + G +V+I     A+    L + + ++       +N
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 54
Query: 66  GCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL------DND 115
                  D+T    +    E  +N+    +G+ D++ NNA       P  L      DN 
Sbjct: 55  TAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQGDHEDNS 111
Query: 116 -----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHA- 166
                + +   ++  N +  FL T   A+  K   P    S +S  ++C  +      A 
Sbjct: 112 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAF 171
Query: 167 --YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
             Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 214

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 7   MSPR---LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIX 58
           + PR   ++   A++TG A  IG   A    + G +V+I     A+    L + + ++  
Sbjct: 14  LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE-- 71
Query: 59  XXXXXANGCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-- 112
                +N       D+T    +    E  +N+    +G+ D++ NNA       P  L  
Sbjct: 72  ----RSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQ 124
Query: 113 ----DND-----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIG 160
               DN      + +   ++  N +  FL T   A+  K   P    S +S  ++C  + 
Sbjct: 125 GDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV 184
Query: 161 GVTSHA---YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
                A   Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 185 DQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI--ADIKDDLGESVCE---------DIXX 59
           L+GKVAL+TG +  IG   A+  +  GA V I   + K++  E+V E          I  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 60  XXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
                +G   ++  +  E  ++N   +      K DI+ NNAGI   A   I +  +  F
Sbjct: 65  NLESLHGVEALYSSLDNE--LQNRTGST-----KFDILINNAGIGPGAF--IEETTEQFF 115
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           +R +SVN    F   + A   ++   R  II+ +S    I      AY+ +K  +     
Sbjct: 116 DRXVSVNAKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSXTKGAINTXTF 173
Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLD 212
             A +LG  GI VN + P         GF+K D
Sbjct: 174 TLAKQLGARGITVNAILP---------GFVKTD 197

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIXXXXXXAN 65
           ++   A++TG A  IG   A    + G +V+I     A+    L + + ++       +N
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE------RSN 54
Query: 66  GCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL------DND 115
                  D+T    +    E  +N+    +G+ D++ NNA       P  L      DN 
Sbjct: 55  TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQGDHEDNS 111
Query: 116 -----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHA- 166
                + +   ++  N +  FL T   A+  K   P    S +S  ++C  +      A 
Sbjct: 112 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAF 171
Query: 167 --YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
             Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 172 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 214

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 7   MSPR---LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIX 58
           + PR   ++   A++TG A  IG   A    + G +V+I     A+    L + + ++  
Sbjct: 14  LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE-- 71
Query: 59  XXXXXANGCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-- 112
                +N       D+T    +    E  +N+    +G+ D++ NNA       P  L  
Sbjct: 72  ----RSNTAVVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQ 124
Query: 113 ----DND-----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIG 160
               DN      + +   ++  N +  FL T   A+  K   P    S +S  ++C  + 
Sbjct: 125 GDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV 184
Query: 161 GVTSHA---YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
                A   Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 185 DQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 7   MSPR---LQGKVALITGGAGSIGECAARLFSKHGAKVLI-----ADIKDDLGESVCEDIX 58
           + PR   ++   A++TG A  IG   A    + G +V+I     A+    L + + ++  
Sbjct: 14  LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE-- 71
Query: 59  XXXXXANGCSYVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-- 112
                +N       D+T    +    E  +N+    +G+ D++ NNA       P  L  
Sbjct: 72  ----RSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF---YPTPLVQ 124
Query: 113 ----DND-----QAEFERILSVNLVGAFLGTKHAARVMK---PAGRGSIISTASVCGVIG 160
               DN      + +   ++  N +  FL T   A+  K   P    S +S  ++C  + 
Sbjct: 125 GDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV 184
Query: 161 GVTSHA---YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
                A   Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A G
Sbjct: 185 DQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 1   MLQANSMSP---RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-----LGE- 51
           M + ++M P   RL G    ITG +  IG+  A   +K GA ++IA          LG  
Sbjct: 30  MGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTI 89
Query: 52  -SVCEDIXXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN 110
            +  E+I      A  C     DV  E+ I  AV  A+ ++G +DI+ NNA  +     N
Sbjct: 90  YTAAEEIEAVGGKALPCI---VDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT--N 144
Query: 111 ILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV--IGGVTSHAYT 168
            LD      + +++VN  G +L +K     +K +    I++ +    +  +      AYT
Sbjct: 145 TLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYT 204
Query: 169 SSKHGVVGLMKNTAVELGRFGIRVNCVSP 197
            +K+G+   +   A E  +  I VN + P
Sbjct: 205 IAKYGMSMYVLGMAEEF-KGEIAVNALWP 232

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVTK 76
           ++TGG   IG+     F + G KV   DI +       ++            Y H DV  
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-------RPNLFYFHGDVAD 58
Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND-QAEFERILSVNLVGAF-LGT 134
              ++  V  A+ +  ++D++ NNA         IL +    EF+ ILSV L   + L  
Sbjct: 59  PLTLKKFVEYAMEKLQRIDVLVNNAC---RGSKGILSSLLYEEFDYILSVGLKAPYELSR 115
Query: 135 KHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNC 194
                ++K  GR  II+ AS         S AY S+K G+V L    A+ LG   + VNC
Sbjct: 116 LCRDELIKNKGR--IINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNC 172
Query: 195 VSPYAVSSPMAKGFLKLD 212
           ++P  ++    + F + D
Sbjct: 173 IAPGWINVTEQQEFTQED 190

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 4/191 (2%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           L+ KVA ITGG   IG   A +F +HG   +IA     L   +             C  +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIAS--RSLPRVLTAARKLAGATGRRCLPL 82
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV     +  AV+ A+ ++G++DI+ N A          L  +   F+ ++ ++  G 
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFN--AFKTVMDIDTSGT 140
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  ++           G I++  +  G  G        S+K  V  + ++ AVE G   I
Sbjct: 141 FNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNI 200
Query: 191 RVNCVSPYAVS 201
           RVN ++P  +S
Sbjct: 201 RVNSLAPGPIS 211

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDIXXXXXXANGCSYVHC 72
           KV +ITGG+   G+  A  F+K GA+V+I    K+ L E+  E              V  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLE----IEQFPGQILTVQX 62
Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAG--IVDEAKPNILDNDQAEFERILSVNLVGA 130
           DV    DI+  +     ++G++DI+ NNA    +  A+    D     +  ++++ L G 
Sbjct: 63  DVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAE----DLSVNGWNSVINIVLNGT 118
Query: 131 FLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR-F 188
           F  ++   +     G +G+II+  +      G       ++K GV+   K  AVE GR +
Sbjct: 119 FYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKY 178
Query: 189 GIRVNCVSP 197
           GIRVN ++P
Sbjct: 179 GIRVNAIAP 187

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVH 71
           Q K AL+TG +  +G+ AA   +++G  ++I   +    ++  E              V 
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--KAALETAEEIEKLGVKVLVVK 60
Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNA--GIVDEAKPNILDNDQAEFERILSVNLVG 129
            +V +   I+         +G+LD+  NNA  G++   +P +++ ++  ++  +++N   
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL---RP-VMELEETHWDWTMNINAKA 116
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS---SKHGVVGLMKNTAVELG 186
                + AA++M+  G G I+S +S+ G I  + +  YT+   SK  +  L +  AVEL 
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSL-GSIRYLEN--YTTVGVSKAALEALTRYLAVELS 173
Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDD 213
              I VN VS  A+ +   K F   +D
Sbjct: 174 PKQIIVNAVSGGAIDTDALKHFPNRED 200

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDIXXXXXXANGCSY 69
           L G+  L+TG    IG    +     GA+V+ ++  + DL   V E           C  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-----------CPG 53
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +        D E A   A+   G +D++ NNA  V   +P  L+  +  F+R   VNL  
Sbjct: 54  IEPVCVDLGDWE-ATERALGSVGPVDLLVNNAA-VALLQP-FLEVTKEAFDRSFEVNLRA 110
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVELGRF 188
               ++  AR +   G    I   S       VT+H+ Y S+K  +  L K  A+ELG  
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPH 170
Query: 189 GIRVNCVSPYAVSSPMAK 206
            IRVN V+P  V + M +
Sbjct: 171 KIRVNAVNPTVVMTSMGQ 188

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 25/192 (13%)
Query: 15  VALITGGAGSIGECAARLFSKHGAKVL--------IADIKDDLGESVCEDIXXXXXXANG 66
           + L+TG     GEC  R F + G KV+        + ++KD+LG+++             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL------------- 48
Query: 67  CSYV-HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
             Y+   DV     IE  + +  +++  +DI+ NNAG+    +P        ++E ++  
Sbjct: 49  --YIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEP-AHKASVEDWETMIDT 105
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N  G    T+     M     G II+  S  G       + Y ++K  V     N   +L
Sbjct: 106 NNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDL 165
Query: 186 GRFGIRVNCVSP 197
               +RV  + P
Sbjct: 166 HGTAVRVTDIEP 177

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           ++ K  L+   +  IG   A + S+ GA+V I    ++L               +G  YV
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL------------LKRSGHRYV 64
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG-----IVDEAKPNILDNDQAEFERILSV 125
            CD+ K+ D+         +  ++DI+  NAG       DE    + + D  E    L +
Sbjct: 65  VCDLRKDLDL------LFEKVKEVDILVLNAGGPKAGFFDE----LTNEDFKEAIDSLFL 114
Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N++      ++    MK  G G I++  S   +      +   S++  + G +K  + E+
Sbjct: 115 NMIKI---VRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEV 171
Query: 186 GRFGIRVNCVSPYAVSSPMAKGFL 209
             +GI VNCV+P    +   K  L
Sbjct: 172 APYGITVNCVAPGWTETERVKELL 195

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 82/203 (40%), Gaps = 15/203 (7%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
             GK   +TG    IG   A  F + GAKV   D      ++  ++              
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD------QAFTQEQYPFATEV------ 52
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV     +       +++  +LD + N AGI+     + L  +  ++++  +VN+ GA
Sbjct: 53  -MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKE--DWQQTFAVNVGGA 109
Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F   +      +    G+I++ AS       +   AY +SK  +  L  +  +EL   G+
Sbjct: 110 FNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169
Query: 191 RVNCVSPYAVSSPMAKGFLKLDD 213
           R N VSP +  + M +     DD
Sbjct: 170 RCNVVSPGSTDTDMQRTLWVSDD 192

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 92  GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIIS 151
           G+LDI+ NNAG++   +  I +   A++   L VN+   F   + A  +   AG G+I++
Sbjct: 93  GRLDIVVNNAGVISRGR--ITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVN 150
Query: 152 TASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP-MAKGFLK 210
            AS  G+  G     Y  +K  +  L +    +    GIR+N V P  V++P +  GF K
Sbjct: 151 VASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAK 210

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 7/179 (3%)
Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXX 63
           +N+   +L+GK AL+TG    IG+  A      GA VLI   ++   E+V E I      
Sbjct: 1   SNAXHXQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRRE---ENVNETI--KEIR 55
Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           A     +   V  +   E      + +Y K+DI+ NN GI +  +    D    ++ ++ 
Sbjct: 56  AQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVE--YFDIPDEDWFKLF 113
Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            VN+      T+   +       G +I  AS   +        Y+++K   + L ++ A
Sbjct: 114 EVNIXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLA 172

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DVT  + I+      +++YG++D++ NNAG          +  + E   +  +++ G
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHVFG 113
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               T+      +  G GS+++ +S  G +      AY+++K  +  L +  A E+  FG
Sbjct: 114 PARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFG 173
Query: 190 IRVNCVSPYAVSS 202
           I+V  V P A  +
Sbjct: 174 IKVLIVEPGAFRT 186

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV+    +   +    +  G +  +  NAG V   KP   +    +F  +  VN+ G 
Sbjct: 70  QCDVSNTDIVTKTIQQIDADLGPISGLIANAG-VSVVKP-ATELTHEDFAFVYDVNVFGV 127
Query: 131 FLGTKHAARV-MKPAGRGSIISTASVCGVI-------GGVTSHAYTSSKHGVVGLMKNTA 182
           F   +  A++ ++   +GSI+ T+S+   I       G +T   Y SSK     L+K  A
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187
Query: 183 VELGRFGIRVNCVSP 197
            E    GIRVN +SP
Sbjct: 188 AEWASAGIRVNALSP 202

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 77/197 (39%), Gaps = 10/197 (5%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIAD----IKDDLGESVCEDIXXXXXXANG 66
           L GK   ITG +  IG   A   ++ GA V IA         L  ++             
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              + CD+ +E  +  AV   V  +G +DI+ NNA  +       LD     F+    VN
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI--WLRGTLDTPXKRFDLXQQVN 121
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTA---SVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
             G+F+  +     +  A    I++ A   S+     G  +  YT +K G   +    A 
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT-GYTLAKXGXSLVTLGLAA 180
Query: 184 ELGRFGIRVNCVSPYAV 200
           E G  G+ +N + P  V
Sbjct: 181 EFGPQGVAINALWPRTV 197

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           L+GK ALITG A   SI    A+ F + GA++        L + V E        A G  
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVRE-------IAKGFG 71
Query: 69  ---YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV--DEAKPNILDNDQAEFERIL 123
               V CDV+ ++DI+N        +G LDI+ ++      +E K  ++D  +  F+  +
Sbjct: 72  SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAM 131
Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNTA 182
            +++      T+    +M+  GR   I T S  G    V  +     +K  +   ++  A
Sbjct: 132 DISVYSLIALTRELLPLME--GRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLA 189
Query: 183 VELGRFGIRVNCVS 196
            ++ + G R+N +S
Sbjct: 190 YDIAKHGHRINAIS 203

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLF---SKHGAKVLIADIKDDLGESVCEDI 57
           M Q    + RL  K  LITG +  IG+  A  +   S    K+++A  + +  E + + I
Sbjct: 21  MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTI 80
Query: 58  XXXXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
                 A        D+T+ + I+  +     ++  +DI+ NNAG         L +D+ 
Sbjct: 81  DQEFPNAK-VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-------KALGSDRV 132
Query: 118 ------EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK 171
                 + + +   N+      T+    + +    G I++  S+ G     T   Y +SK
Sbjct: 133 GQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASK 192
Query: 172 HGVVGLMKNTAVELGRFGIRVNCVSP 197
             V     +   EL    IRV  ++P
Sbjct: 193 FAVGAFTDSLRKELINTKIRVILIAP 218

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 5   NSMSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLG---ESVCEDIXX 59
            + S  LQGK  LI G A   SI    A+   + GA++      D L    E + E++  
Sbjct: 23  TAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGA 82
Query: 60  XXXXANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV--DEAKPNILDNDQA 117
                      HCDV     I+    T   ++GKLD + +  G    DE     +D  +A
Sbjct: 83  FVAG-------HCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEA 135
Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV--------IGGVTSHAYTS 169
            F   + +++      ++ A ++M  A  GSI+ T +  G         + GV   A  +
Sbjct: 136 NFTNTMLISVYSLTAVSRRAEKLM--ADGGSIL-TLTYYGAEKVMPNYNVMGVAKAALEA 192
Query: 170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           S       +K  AV+LG   IRVN +S   + +  A G
Sbjct: 193 S-------VKYLAVDLGPQNIRVNAISAGPIKTLAASG 223

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYV 70
           +QGK+A++T G+  +G  +A   +++GA++L+     +  E+    I      A     V
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIV 63
Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILD-NDQAEFERILSVNLVG 129
             D+ +  DI+     A    G  DI+  + G     +   L   D  E  R+L+ + V 
Sbjct: 64  AGDIREPGDIDRLFEKA-RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV- 121
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            ++G + AA  M   G G ++   SV  +            +  V+G+++  A+EL   G
Sbjct: 122 -WVG-RRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHG 179
Query: 190 IRVNCVSP 197
           + VN V P
Sbjct: 180 VTVNAVLP 187

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCDVTK 76
            ITG     GE  AR F++ G  +++   +++  +++  ++            +  DV  
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLP----LTLDVRD 80
Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGI---VDEAKPNILDNDQAEFERILSVNLVGAFLG 133
                 AV+    ++  L  + NNAG+    D A+   LD    +++  +  N+ G    
Sbjct: 81  RAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLD----DWDTXVDTNIKGLLYS 136
Query: 134 TKHA-ARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           T+    R++      SI++  SV G      SH Y  +K  V     N   +L   G+RV
Sbjct: 137 TRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV 196
Query: 193 NCVSP 197
             + P
Sbjct: 197 TNLEP 201

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCS 68
           L GK  LI G A   SI    A+  S  GA++         GE+  + +        G  
Sbjct: 12  LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFTY----QGEAXKKRVEPLAEEVKGFV 67
Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERILSVN 126
             HCDV+    I+   NT   ++GKLD + +  G  D  E     +D  ++ F    +++
Sbjct: 68  CGHCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNIS 127
Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNTAVEL 185
           +      TK A ++    G    I T +  G    V ++     +K  +   +K  AV+L
Sbjct: 128 VYSLTALTKRAEKLXSDGGS---ILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDL 184
Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
           G   IRVN +S   + +  A G
Sbjct: 185 GPKHIRVNAISAGPIKTLAASG 206

>pdb|2Z5L|A Chain A, The First Ketoreductase Of The Tylosin Pks Length = 511

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVH--CDV 74
           LITGG G+IG   AR  +  GA+ L+   +         ++       +GC  VH  CDV
Sbjct: 263 LITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAEL-AEELRGHGCEVVHAACDV 321
Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFL 132
             E+D   A+ TA       + +F+ AGI+D+A   ++D    E FE +    + GA L
Sbjct: 322 A-ERDALAALVTAYPP----NAVFHTAGILDDA---VIDTLSPESFETVRGAKVCGAEL 372

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 25/203 (12%)
Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD-- 73
           A+ITGGA  IG   A    + G +V++        E   + +      A   S V C   
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVV---HYRHSEGAAQRLVAELNAARAGSAVLCKGD 70
Query: 74  ----VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND----------QAEF 119
                +     E+ ++ +   +G+ D++ NNA       P +  +D           A+ 
Sbjct: 71  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTNGAADAKPIDAQV 129
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIGGVTSHA---YTSSKHGV 174
             +   N V      +  AR     G  R   +S  ++C  +  +       YT +KH +
Sbjct: 130 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHAL 189
Query: 175 VGLMKNTAVELGRFGIRVNCVSP 197
            GL +  A+EL    IRVN V+P
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAP 212

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 25/203 (12%)
Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIXXXXXXANGCSYVHCD-- 73
           A+ITGGA  IG   A    + G +V++        E   + +      A   S V C   
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVV---HYRHSEGAAQRLVAELNAARAGSAVLCKGD 70
Query: 74  ----VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND----------QAEF 119
                +     E+ ++ +   +G+ D++ NNA       P +  +D           A+ 
Sbjct: 71  LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTNGAADAKPIDAQV 129
Query: 120 ERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIGGVTSHA---YTSSKHGV 174
             +   N V      +  AR     G  R   +S  ++C     +       YT +KH +
Sbjct: 130 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHAL 189
Query: 175 VGLMKNTAVELGRFGIRVNCVSP 197
            GL +  A+EL    IRVN V+P
Sbjct: 190 GGLTRAAALELAPRHIRVNAVAP 212

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 72  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 127 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 180

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 67  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 121
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 122 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 175

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 92  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 146
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 147 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE 200

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 73  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 127
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 128 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 181

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 86  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 141 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 75  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 129
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 130 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 183

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 86  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 141 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 194

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 89  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 143
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 144 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 197

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 92  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 146
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 147 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE 200

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   SK GA  VL A  ++ L + V   +      A+  + 
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  +  A    G LD++  N   + +   ++  +D     R++ VN + 
Sbjct: 67  TMEDMTFA---EQFIVKAGKLMGGLDMLILNH--ITQTSLSLFHDDIHSVRRVMEVNFL- 120
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           +++    AA  M     GSI   +S+ G +       Y++SK  + G       EL
Sbjct: 121 SYVVMSTAALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTEL 176

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 82  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 136
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 137 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 190

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)
Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDIXXXXXXANGCSY 69
           LQGK  ++TG +  IG   A   +K GA V++ A  K+ L + V   +      A+  + 
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+T     E  V  A    G LD++  N   +     N+  +D     + + VN + 
Sbjct: 72  TMEDMTFA---EQFVAQAGKLMGGLDMLILNH--ITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
             + T  A  ++K +  GSI+  +S+ G +      AY++SK  + G   +   E
Sbjct: 127 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKE 180

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-107
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-85
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	8e-84
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-83
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	4e-83
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	9e-83
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	7e-82
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-81
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-78
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-78
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-78
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-77
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-77
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-77
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-77
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-76
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-74
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-73
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-73
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-72
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-72
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	9e-71
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-70
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	5e-70
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	9e-70
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-69
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-68
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-68
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-68
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-68
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-68
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-67
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-67
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-67
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-67
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	7e-67
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-66
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-66
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-65
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-65
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-65
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-65
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-65
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-65
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-64
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-64
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	9e-64
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-63
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-62
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-62
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-62
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-62
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-61
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-61
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	8e-61
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	9e-61
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-60
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-60
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-60
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-60
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	9e-60
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-59
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-59
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-59
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-59
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-59
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-58
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-58
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-58
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	5e-58
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-58
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	7e-58
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-57
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-57
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-57
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-57
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-56
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-56
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-56
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	4e-56
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	5e-56
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-55
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-55
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-55
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-55
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	9e-55
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-54
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-54
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-54
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-54
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	7e-54
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-54
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	9e-54
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-53
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-53
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-53
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-52
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-52
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-51
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-51
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	5e-51
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	8e-51
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-50
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-50
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-50
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-50
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-50
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	8e-50
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	9e-50
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-49
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-49
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-49
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-49
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-49
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-49
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	8e-49
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-48
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-48
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-48
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-47
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-47
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-47
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	4e-47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-47
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-42
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	5e-47
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	7e-47
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-46
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-46
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-46
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-46
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-46
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-45
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-45
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-45
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-45
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-45
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	7e-45
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-44
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-44
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-44
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	7e-44
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-43
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-43
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-43
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	6e-43
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-43
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	9e-43
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-42
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-42
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-42
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-42
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-42
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	9e-42
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-41
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-40
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-40
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-40
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-40
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-40
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-40
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	4e-40
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-39
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-39
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-38
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-37
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-37
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-36
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-36
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-36
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-34
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-34
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-33
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-31
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-31
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-29
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-28
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	8e-26
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-25
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-23
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-22
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-21
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-13
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-13
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-08
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-08
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-08
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	6e-08
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-08
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	2e-07
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	3e-07
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-07
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-07
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-07
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-06
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-06
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	3e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	7e-05
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	7e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	3e-04
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	3e-04
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	3e-04
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	4e-04
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	5e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  308 bits (792), Expect = e-107
 Identities = 106/215 (49%), Positives = 146/215 (67%), Gaps = 5/215 (2%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
               +S + RLQ KVA+ITGGAG IGE  A+LF ++GAKV+IADI DD G+ VC +I S 
Sbjct: 4   TSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS- 62

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
               +  S+VHCDVTK++D+ N V+T ++++GKLDIMF N G++     +IL+    +F+
Sbjct: 63  ---PDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFK 119

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-SHAYTSSKHGVVGLMK 179
           R++ +N+ GAFL  KHAARVM PA +GSI+ TAS+     G   SH YT++KH V+GL  
Sbjct: 120 RVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTT 179

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           +   ELG +GIRVNCVSPY V+SP+      +D  
Sbjct: 180 SLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 214

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  277 bits (710), Expect = 4e-95
 Identities = 88/202 (43%), Positives = 123/202 (60%), Gaps = 8/202 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           MS RL GKVAL++GGA  +G    R     GAKV+  DI D+ G+++  +++ +      
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA------ 54

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             YVH DVT+    + AV+TAV+ +G L ++ NNAGI++     I D    E++RIL VN
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVN 112

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G FLG +   + MK AGRGSII+ +S+ G+ G V  H YT++K  V GL K+TA+ELG
Sbjct: 113 LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 172

Query: 187 RFGIRVNCVSPYAVSSPMAKGF 208
             GIRVN + P  V +PM    
Sbjct: 173 PSGIRVNSIHPGLVKTPMTDWV 194

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  252 bits (647), Expect = 2e-85
 Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 2/214 (0%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           M   +S + R   +V LITGG   +G   A   +  GAK+ + D+  +  E+    +  +
Sbjct: 1   MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET 60

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
           +  A        DV+ E  +E  V     ++G++D  FNNAGI  +  P       AEF+
Sbjct: 61  APDAE-VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTAAEFD 118

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           +++S+NL G FLG +   ++M+  G G +++TASV G+ G      Y ++KHGVVGL +N
Sbjct: 119 KVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRN 178

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           +AVE GR+GIR+N ++P A+ +PM +  +K  D 
Sbjct: 179 SAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP 212

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  249 bits (637), Expect = 8e-84
 Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 9/209 (4%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           +   R  GKV ++TGG   IG    R F   GA+V+I D  +  G ++ +++        
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------P 54

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
           G  ++ CDVT+E D++  V+  + ++G+LD + NNAG     +    +     F ++L +
Sbjct: 55  GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLEL 113

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL+G +  TK A   ++   +G++I+ +S+ G IG   +  Y ++K  V  + K  A++ 
Sbjct: 114 NLLGTYTLTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDE 172

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             +G+RVNC+SP  + +P+ +    L  D
Sbjct: 173 SPYGVRVNCISPGNIWTPLWEELAALMPD 201

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  247 bits (633), Expect = 2e-83
 Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 11/209 (5%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           + RLQGKVAL+TGGA  +G    +L    GAKV  +DI +  G+ +  ++          
Sbjct: 1   TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER------S 54

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            +V  DV+ E D    +     + G L+++ NNAGI+     ++      +F R+L +N 
Sbjct: 55  MFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG--DMETGRLEDFSRLLKINT 112

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
              F+G +     MK  G GSII+ ASV   +       Y++SK  V  L +  A+   +
Sbjct: 113 ESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171

Query: 188 --FGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             + IRVN + P  + +PM +  L     
Sbjct: 172 QGYAIRVNSIHPDGIYTPMMQASLPKGVS 200

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  246 bits (630), Expect = 4e-83
 Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 8/199 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GK  +ITGGA  +G  AAR     GA+V++AD+ D+ G +   ++  +        Y
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA------ARY 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            H DVT E+D +  V  A  ++G +D + NNAGI       +       F +++ +NL G
Sbjct: 56  QHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM--FLETESVERFRKVVEINLTG 113

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F+G K     MK AG GSI++ +S  G++G   + +Y +SK GV GL K  AVELG   
Sbjct: 114 VFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDR 173

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           IRVN V P    +PM    
Sbjct: 174 IRVNSVHPGMTYTPMTAET 192

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  246 bits (630), Expect = 9e-83
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           SM+  L+ KVA+ITG  G IG   +R+ ++ GA+V++AD+ +         +        
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG----- 58

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
              +   D+T E  +   ++  +  +G+LDI+ NNA   D A   +       ++   +V
Sbjct: 59  -AVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTV 117

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N  G  L  K+A   +  AG G+I++ +S         S AY  +K  +  L +  A + 
Sbjct: 118 NARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFL 209
           GR G+R N ++P  V +P  +  L
Sbjct: 178 GRHGVRCNAIAPGLVRTPRLEVGL 201

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  243 bits (624), Expect = 7e-82
 Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 8/212 (3%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
             +   P L GKVA++TG    IG   AR  +  G  VL ADI  D  ++    I     
Sbjct: 19  PGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----- 73

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
              G +    DV+ E+ I   V+  V+ +G +D +  NAG+V  A  +++D    +F+R+
Sbjct: 74  -GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA--SLIDTTVEDFDRV 130

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           +++NL GA+L TKHAA  M   G G+I++ +S+ G +    + AY  SK G++ L + TA
Sbjct: 131 IAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITA 190

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            EL   GIR N + P  V +PM +  + + D 
Sbjct: 191 AELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG 222

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  243 bits (622), Expect = 2e-81
 Identities = 68/209 (32%), Positives = 100/209 (47%), Gaps = 5/209 (2%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           +  RL+GK+A++TG +  IG  AA LF++ GAKV++     +    + ++I+     A  
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEA-- 59

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
            + +  DV  E   E  V  AV ++G LD  FNNAG +      I       +   L  N
Sbjct: 60  -AALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE-ISSLSVEGWRETLDTN 117

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVEL 185
           L  AFL  K+    +   G GS+  T+S  G   G      Y +SK G++GL++  AVEL
Sbjct: 118 LTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVEL 177

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           G  GIRVN + P    +P     L     
Sbjct: 178 GARGIRVNALLPGGTDTPANFANLPGAAP 206

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  235 bits (602), Expect = 1e-78
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 5/209 (2%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           S    L+ KV ++TG    IG   A+ F+ + + V+  ++ +D    + +++        
Sbjct: 1   SY-QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEV- 58

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DV+K+KD+E  V      Y ++D++ NNAGI+D   P + +     +ER+L+V
Sbjct: 59  --LGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTP-VAEVSDELWERVLAV 115

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL  AF  ++    +M   G+G I++TAS+ G+ GG     YT +KHG++GL ++ A   
Sbjct: 116 NLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHY 175

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           G  GIR   V P  V + +  G  K  + 
Sbjct: 176 GDQGIRAVAVLPGTVKTNIGLGSSKPSEL 204

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  235 bits (602), Expect = 2e-78
 Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 10/213 (4%)

Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS 61
           L   SM   L  +V ++TGG   IG   A LF+K+GA V++AD+ +D    V  +I S  
Sbjct: 18  LYFQSM--DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK- 74

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
                   V  DV+  KD E+ V    +++G++D++ NNAG       N++   +  ++R
Sbjct: 75  -----AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTG--NVVTIPEETWDR 127

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           I+SVN+ G FL +K+   VM+  G GSII+T S           AY +SK  +  L +  
Sbjct: 128 IMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAM 187

Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           A++  + GIRVN V+P  + SP          D
Sbjct: 188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKD 220

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  235 bits (601), Expect = 2e-78
 Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 1/204 (0%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           SM    Q +  L+TGG   IG+  A      GA V+I     D      +++ +  ++  
Sbjct: 4   SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGG 63

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
              Y   D+T E +   AV+   + +G+L  + + AG  +   P I   D   + R + +
Sbjct: 64  AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEAWRRTVDL 122

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           N+ G     KHAAR M   G GS +  +S+          AY  +K  V  LM+  A EL
Sbjct: 123 NVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADEL 182

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFL 209
           G   +RVN + P  + + +     
Sbjct: 183 GASWVRVNSIRPGLIRTDLVAAIT 206

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  232 bits (595), Expect = 1e-77
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 4/204 (1%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           MS +  GKV L+TG  G+IG   A   ++ G  + + D+  +  E     +      A  
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
                CDVT E+ +   V++ V  +GK+D +FNNAG      P + D    +F R+L++N
Sbjct: 59  -RSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDDFARVLTIN 116

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + GAF   K  +R M     G I++TAS+ GV G     AY +SK  ++ L +  A++L 
Sbjct: 117 VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLK 210
            + IRVN +SP  +          
Sbjct: 177 PYNIRVNAISPGYMGPGFMWERQV 200

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  232 bits (594), Expect = 1e-77
 Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 9/210 (4%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           S RL GKVA+ITGG   IG   A  F + GAKV+I     D+GE   + +     + +  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQI 56

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            +   D + E       +     +G +  + NNAGI      ++ +   AE+ ++L+VNL
Sbjct: 57  QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNL 114

Query: 128 VGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
            G F GT+   + MK  G G SII+ +S+ G +G  +  AY +SK  V  + K+ A++  
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174

Query: 187 R--FGIRVNCVSPYAVSSPMAKGFLKLDDD 214
              + +RVN V P  + +P+       ++ 
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLPGAEEA 204

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  232 bits (595), Expect = 1e-77
 Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 17/210 (8%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           + M      KVA++TGG+  IG        ++GAKV+   + +    +V +         
Sbjct: 7   HHME-EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD--------- 56

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
               +   DVT E++++ AV     +YG++DI+ NNAGI   +   +       + RI+ 
Sbjct: 57  ----HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS--PLHLTPTEIWRRIID 110

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           VN+ G++L  K+   VM   G GSII+ ASV        + AY +SKH ++GL ++ A++
Sbjct: 111 VNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAID 170

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
                IR N V P  + +PM     K++  
Sbjct: 171 YAP-KIRCNAVCPGTIMTPMVIKAAKMEVG 199

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  230 bits (590), Expect = 6e-77
 Identities = 73/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS 63
             SM   L+GKVALITG     GE  A+ F+K GAKV+I D      E V  +I  +   
Sbjct: 2   PGSM--SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA--- 56

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
                 V  D++KE D++ AV  A+S++GK+DI+ NNAGI  + +      +  EF+RI+
Sbjct: 57  ---ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQN-AELVEPEEFDRIV 112

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGS----IISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
            VN+ G +L T       K  G       I++ AS            Y ++K  VV + K
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTK 172

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             A+EL    IRV  ++P A  +P+   F+  D +
Sbjct: 173 ALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSE 207

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  228 bits (583), Expect = 5e-76
 Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 3/198 (1%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            +VA++TG +   G   A  F   G +V   D+  +  E        + +       V  
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK--VLRVRA 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVNLVGAF 131
           DV  E D+  A+   + Q+G +D++ NNAGI   ++   +      +F+++++VN+ G F
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           LG +     M   G G I++ ASV  ++      AYT+SK  V+ L K+ AV+    GIR
Sbjct: 120 LGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179

Query: 192 VNCVSPYAVSSPMAKGFL 209
            N V P  + +PM +  L
Sbjct: 180 CNAVCPGMIETPMTQWRL 197

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  225 bits (576), Expect = 2e-74
 Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 15/217 (6%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
            SM+ R++GKVA +TG A   G   A   ++ GA ++  DI   +   V +    +S+  
Sbjct: 3   GSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPE 62

Query: 65  NG-------------CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNI 111
           +                    DV     ++ AV++ V Q G+LDI+  NAGI +     +
Sbjct: 63  DLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDT-L 121

Query: 112 LDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSS 170
               + ++  ++ +NL G +   K     M   GR GSII T+SV G+     +  Y ++
Sbjct: 122 DKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAA 181

Query: 171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           KHGVVGLM+   VELG+  IRVN V P  V +PM   
Sbjct: 182 KHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN 218

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  223 bits (570), Expect = 1e-73
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 7/216 (3%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
            L   SM       VALITG    IG   A   +  G  V          E V ++I  +
Sbjct: 17  NLYFQSMM-NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA 75

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A     +  DV+ E  + NAV   V ++G LDI+  NAGI     P I D    E++
Sbjct: 76  GGQA---IALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWD 131

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV--IGGVTSHAYTSSKHGVVGLM 178
             ++VNL G FL        +K  G G+I+  +S+ G        + AYT++K   V ++
Sbjct: 132 ETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIV 191

Query: 179 KNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           +  A+ELG+  IRVN V P A+ + ++       ++
Sbjct: 192 QQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE 227

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  221 bits (565), Expect = 3e-73
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 11/205 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              GK  L+TGGA  IG   A+ F++ GA V + D++ +  E            A G ++
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA---------EAIGGAF 53

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+  E++    V  A    G++D++ NNA I      + L     E+ R+L VNL  
Sbjct: 54  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTA 111

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               +  AAR M+  G G+I++ ASV G+     + AY +SK G+V L ++ A++L    
Sbjct: 112 PMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLR 171

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVN V+P A+++      + L  D
Sbjct: 172 IRVNAVAPGAIATEAVLEAIALSPD 196

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  220 bits (562), Expect = 1e-72
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 18/209 (8%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
             S  L+ KV ++TG +  IG   A  F   G+KV+   I D                  
Sbjct: 2   GFS-DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------ 48

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
              ++ CDVT    ++ +++    +YG + ++ NNAGI       I      E+ RI+ V
Sbjct: 49  --DHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG--KIESMSMGEWRRIIDV 104

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL G +  +K A   M  +   SI++ +SV   I    + AY +SKH V+GL K+ A++ 
Sbjct: 105 NLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDY 164

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
               +R N V P  + +P+ +   +L+  
Sbjct: 165 AP-LLRCNAVCPATIDTPLVRKAAELEVG 192

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  218 bits (559), Expect = 3e-72
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           M  ++++  RL GK A+ITG    IG+  A  F+  GA V+++DI  D    V ++I   
Sbjct: 1   MFNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL 58

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A       CD+T E+++    + A+S+ GK+DI+ NNAG      P   D   A+F 
Sbjct: 59  GGQAFA---CRCDITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFR 112

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R   +N+   F  ++  A  M+  G G I++  S+      +   +Y SSK     L++N
Sbjct: 113 RAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRN 172

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
            A +LG   IRVN ++P A+ +   K  +
Sbjct: 173 MAFDLGEKNIRVNGIAPGAILTDALKSVI 201

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  215 bits (550), Expect = 9e-71
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 16/213 (7%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M+  + GKVAL+TG A  IG   A      GAKV + D   + G      +         
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK- 59

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
             ++ CDV  ++ + +     V  +G+LDI+ NNAG+ +E            +E+ L +N
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQIN 109

Query: 127 LVGAFLGTKHAARVMKPAGRGS---IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           LV    GT      M     G    II+ +S+ G++       Y +SKHG+VG  ++ A+
Sbjct: 110 LVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAL 169

Query: 184 --ELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
              L   G+R+N + P  V++ + +   K ++ 
Sbjct: 170 AANLMNSGVRLNAICPGFVNTAILESIEKEENM 202

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  215 bits (550), Expect = 1e-70
 Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 5/206 (2%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
            SM   L  KV +I+G   ++G   AR  ++ GA +++A    +  E V + ++ +   A
Sbjct: 3   GSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRA 62

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                V  D+T +  + + V+  +  YG++D++ NNA  V   KP   +         + 
Sbjct: 63  LS---VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKP-FANTTFEHMRDAIE 118

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           + + GA    +     ++   +G++++  S+          AY  +K  ++ + +  A E
Sbjct: 119 LTVFGALRLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATE 177

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLK 210
           LG  GIRVN V P  +     K + +
Sbjct: 178 LGEKGIRVNSVLPGYIWGGTLKSYFE 203

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  214 bits (546), Expect = 5e-70
 Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 11/208 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           +L G+VALITGGA  +G      F   GA+V + D   +    +      +         
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN------AVG 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP---NILDNDQAEFERILSVN 126
           V  DV   +D + A    ++ +GK+D +  NAGI D +        D   A F+ I  VN
Sbjct: 56  VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G     K     +  + RGS++ T S  G         YT++KH VVGL++  A EL 
Sbjct: 116 VKGYIHAVKACLPALV-SSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA 174

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
              +RVN V+P  +++ +         +
Sbjct: 175 P-HVRVNGVAPGGMNTDLRGPSSLGLSE 201

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  212 bits (542), Expect = 9e-70
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 15/206 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GKV ++T  A  IG+ AA  F++ GAKV+  DI +   + + +          G   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP--------GIQT 54

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DVTK+K I+   N       +LD++FN AG V      +LD ++ +++  +++N+  
Sbjct: 55  RVLDVTKKKQIDQFANE----VERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRS 108

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGRF 188
            +L  K     M     G+II+ +SV   + GV +   Y+++K  V+GL K+ A +  + 
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
           GIR NCV P  V +P  +  ++   +
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQARGN 194

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  212 bits (542), Expect = 2e-69
 Identities = 66/214 (30%), Positives = 94/214 (43%), Gaps = 13/214 (6%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS-- 62
            SM+ +L+G+VA ITG A   G   A   +  GA ++  DI   L   V  D +S     
Sbjct: 3   GSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLS 62

Query: 63  ------SANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN 114
                  A          D      +   V+  V+  G+LDI+  NAG+         D 
Sbjct: 63  ETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQA--WDDI 120

Query: 115 DQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHG 173
              +F  ++ +N+ G +      A  +   GR GSII  +S  G+        YT+SKH 
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHA 180

Query: 174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           V GL +  A ELG+  IRVN V P  V++PM  G
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG 214

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  210 bits (537), Expect = 1e-68
 Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
            R   KVA+ITG +  IG   A LF++ GAKV I     +  E   + I ++  S    +
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN--ILDNDQAEFERILSVN 126
            V  DVT +   +  ++T + ++GKLDI+ NNAG       +          ++  L++N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVC-GVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L      TK A   +  + +G I++ +S+  G+        Y+ +K  +    +NTA++L
Sbjct: 122 LRSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 180

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            + GIRVN +SP  V++         ++ 
Sbjct: 181 IQHGIRVNSISPGLVATGFGSAMGMPEET 209

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  210 bits (536), Expect = 1e-68
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 9/200 (4%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           SM  RL+GK ALITG A  IG   A  + + GA V IADI  +       +I  ++    
Sbjct: 1   SMMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAY--- 57

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT++  I+ A+   V   G LDI+ NNA + D A   I++  +  +E++ ++
Sbjct: 58  ---AVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAP--IVEITRESYEKLFAI 112

Query: 126 NLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           N+ G     + AAR M   GR G II+ AS  G  G      Y ++K  V+ L ++  ++
Sbjct: 113 NVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLD 172

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           L +  I VN ++P  V    
Sbjct: 173 LIKHRINVNAIAPGVVDGEH 192

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  210 bits (537), Expect = 2e-68
 Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 11/212 (5%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS-- 63
           SM+ +++GKVA ITG A   G   A   ++ GA ++  D+   L        +    +  
Sbjct: 21  SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAET 80

Query: 64  -----ANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ 116
                A G        DV     ++ AV+  V+Q G+LDI+  NA +  E    +   D 
Sbjct: 81  VRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTR-LNRMDP 139

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVV 175
             +  ++ VNL GA++  + A   +    R GSI+ T+S+ G+ G      Y +SKHG+ 
Sbjct: 140 KTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLH 199

Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           GLM+  A+ELG   IRVN V P +V++PM   
Sbjct: 200 GLMRTMALELGPRNIRVNIVCPSSVATPMLLN 231

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  208 bits (533), Expect = 4e-68
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 10/213 (4%)

Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS 61
           L   SM+ RL  K+A+ITG    IG  AA+ F   GA+V I   + D+ ++   +I    
Sbjct: 18  LYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---- 73

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
               G   +  D     +++       ++ G++D++F NAG        + +  + +++ 
Sbjct: 74  --GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLP--LGEVTEEQYDD 129

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
               N+ G     + A  ++  A   S++ T S  G  G      Y +SK  +    +N 
Sbjct: 130 TFDRNVKGVLFTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNW 187

Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            ++L   GIR+N +SP    +         D  
Sbjct: 188 ILDLKDRGIRINTLSPGPTETTGLVELAGKDPV 220

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  207 bits (530), Expect = 6e-68
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 2/207 (0%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           M   ++    L+G+V L+TG A  IG  AAR ++ HGA V++    +     V + I S+
Sbjct: 2   MFDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA 61

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                    ++ +    +           ++G+LD + +NA I+    P +      +F 
Sbjct: 62  GQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTP-LEQLPDEDFM 120

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           +++ VN+   F+ T+    ++K +   SI  T+S  G  G     AY  SK    GLM+ 
Sbjct: 121 QVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQT 180

Query: 181 TAVEL-GRFGIRVNCVSPYAVSSPMAK 206
            A EL G   +R N ++P A  + M  
Sbjct: 181 LADELEGVTAVRANSINPGATRTGMRA 207

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  206 bits (527), Expect = 3e-67
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           SMS +   K+A++TG    +G   A   +  G  V +A  + D  +    +I        
Sbjct: 22  SMS-KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDD----- 75

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT    +       V ++G++D++FNNAG    A P + D   A++++++  
Sbjct: 76  -ALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIP-MEDLTFAQWKQVVDT 133

Query: 126 NLVGAFLGTKHAARVMKP--AGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           NL G FL T+ A RVMK      G II+  S+        S  YT++KH + GL K+T++
Sbjct: 134 NLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSL 193

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGF 208
           +     I    +      +PMA+  
Sbjct: 194 DGRVHDIACGQIDIGNADTPMAQKM 218

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  205 bits (525), Expect = 3e-67
 Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 7/204 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
            S R + KV ++TG  G IG+  A   ++ GA V++ADI  +  E+V + I +   +A  
Sbjct: 3   GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS 62

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSV 125
              V  DV+  +  +   +  ++++G +D + NNA I    K + +L  D   +++ +SV
Sbjct: 63  ---VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL GA   T+   + M   G G+I++ +S    +       Y  +K G+ GL +  + EL
Sbjct: 120 NLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSREL 176

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFL 209
           G   IR+N ++P  + +   +   
Sbjct: 177 GGRNIRINAIAPGPIDTEANRTTT 200

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  207 bits (528), Expect = 3e-67
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 13/212 (6%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS- 62
               +  LQG+VA ITG A   G   A   +  GA ++  DI   +  SV    +S    
Sbjct: 6   VAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDL 65

Query: 63  -------SANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILD 113
                     G        DV  +  +   V   + Q+G+LD++  NAG++   +  + +
Sbjct: 66  DETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGR--VWE 123

Query: 114 NDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKH 172
               +++ ++ VNL G +   +     M  AG  GSI+  +S  G+     +  Y++SKH
Sbjct: 124 LTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKH 183

Query: 173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           G+  L    A+ELG +GIRVN + PY+V +PM
Sbjct: 184 GLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  205 bits (524), Expect = 6e-67
 Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 6/202 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL  +VA++TGGA +IG       ++ GA+V+IAD+ + +     ED+          S 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDV---SS 66

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DVT  + ++NAV +   Q G++DI+   AGI         D    ++ + + +NL G
Sbjct: 67  VVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVK-AEDMTDGQWLKQVDINLNG 125

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH--AYTSSKHGVVGLMKNTAVELGR 187
            F   +   R+M    +G I++  S+ G+I        AY +SK GV   +++ A E   
Sbjct: 126 MFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAP 185

Query: 188 FGIRVNCVSPYAVSSPMAKGFL 209
            GIR N V+P  + + + +  +
Sbjct: 186 HGIRANAVAPTYIETTLTRFGM 207

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  205 bits (523), Expect = 7e-67
 Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 2/207 (0%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
               L  ++ L+TG +  IG  AA  ++++GA V++    ++    V   I+  +     
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +       ++ +         Y +LD + +NAG++ +  P + + +   ++ ++ VN
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCP-MSEQNPQVWQDVMQVN 124

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           +   F+ T+    ++  +  GS++ T+S  G  G     AY +SK    G+M+  A E  
Sbjct: 125 VNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQ 184

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           +  +RVNC++P    + M       +D
Sbjct: 185 Q-RLRVNCINPGGTRTAMRASAFPTED 210

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  204 bits (522), Expect = 1e-66
 Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           M   +     L   VA++TG A  IG   A  F+K GA V++ D+K +  E+V   I  +
Sbjct: 2   MSYESPF--HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA 59

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A G   + C+VT E+  E  +  A+ Q+GK+ ++ NNAG      P   D   ++FE
Sbjct: 60  GGKAIG---LECNVTDEQHREAVIKAALDQFGKITVLVNNAGG---GGPKPFDMPMSDFE 113

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
               +NL   F  ++ AA  M+ AG G+I++ +S+ G    V   +Y SSK  V  L +N
Sbjct: 114 WAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRN 173

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
            A ++G  GIRVN ++P A+ +      L
Sbjct: 174 IAFDVGPMGIRVNAIAPGAIKTDALATVL 202

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  203 bits (519), Expect = 3e-66
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 4/199 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+ KVAL+T     IG   AR  ++ GA V+++  K +  +     +     S  G   
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG--- 67

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             C V K +D E  V  AV+ +G +DI+ +NA +       I+D  +  +++IL VN+  
Sbjct: 68  TVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN-IIDATEEVWDKILHVNVKA 126

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
             L TK     M+  G GS++  +SV           Y  SK  ++GL KN AVEL    
Sbjct: 127 TVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRN 186

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           IRVNC++P  + +  ++  
Sbjct: 187 IRVNCLAPGLIKTNFSQVL 205

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  201 bits (515), Expect = 1e-65
 Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSY 69
                 L+TGG+  IG+    L  ++    +I  DI+        +             +
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-------------F 48

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  D+TK++DI N ++    +    D +F NAGI+ +   +I D D    +++L +N+  
Sbjct: 49  IKADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWS 104

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           +    K     +K     SI+   S    I    S AYT SK  +  + K+ A++L ++ 
Sbjct: 105 SIYFIKGLENNLK--VGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQ 162

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVN V P  V + + +  ++   +
Sbjct: 163 IRVNTVCPGTVDTDLYRNLIQKYAN 187

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  202 bits (516), Expect = 1e-65
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 7/200 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSAN 65
           M   L+GKV +ITG +  +G+  A  F+   AKV++      D   SV E+I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N V +A+ ++GKLD+M NNAG+ +    +  +   +++ +++  
Sbjct: 61  A---VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDT 115

Query: 126 NLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +       +G++I+ +SV   I       Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
               GIRVN + P A+++P+
Sbjct: 176 YAPKGIRVNNIGPGAINTPI 195

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  202 bits (517), Expect = 1e-65
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 5/206 (2%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
                  +G++AL+TGG   +G   A+  S  G  V+I   + D+ ++   +I   + + 
Sbjct: 25  AQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNI 84

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                V CDV     +        +++ +LD++ NNAG      P + +    ++  I++
Sbjct: 85  --VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVP-LEEVTFEQWNGIVA 141

Query: 125 VNLVGAFLGTKHAARVMKPAGR--GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            NL GAFL T+HA R+MK      G II+  S+        S  YT++KH + GL K+TA
Sbjct: 142 ANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGF 208
           ++     I    +     ++ M    
Sbjct: 202 LDGRMHDIACGQIDIGNAATDMTARM 227

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  202 bits (516), Expect = 1e-65
 Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 17/209 (8%)

Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS 61
           L   SM    +GKVAL+TG AG IG          GA+V +AD       +         
Sbjct: 18  LYFQSMQ-GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL------- 69

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
                  ++  D+ +    +       +  G+LDI+ NNAG++      I +   A++  
Sbjct: 70  -------HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG--RITETTDADWSL 120

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
            L VN+   F   + A  +M  AG G+I++ AS  G+  G     Y  +K  +  L +  
Sbjct: 121 SLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCM 180

Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGFLK 210
            ++    GIR+N V P  V++PM +    
Sbjct: 181 GMDHAPQGIRINAVCPNEVNTPMLRTGFA 209

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  201 bits (513), Expect = 3e-65
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 6   SMSPRLQGKVALITGGAGS-IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
                L+GKV L+T  AG+ IG   AR     GA V+I+D  +       + ++      
Sbjct: 15  DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR 74

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                V CDVT  + ++  +   V + G+LD++ NNAG+  +    ++D    E++R+L+
Sbjct: 75  --VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP--VVDMTDEEWDRVLN 130

Query: 125 VNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           V L      T+ A R  +     G I++ ASV G     +   Y ++K GV+ L + +A+
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFL 209
           E   FG+R+N VSP        +   
Sbjct: 191 EAVEFGVRINAVSPSIARHKFLEKTS 216

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  200 bits (512), Expect = 5e-65
 Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 5/201 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK ALITG    IG   AR F+  GA+++++       ++    +     +      
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD--VHT 74

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  D+ +          A   +G LD++ NNAGI       ++D D   F+  ++VNL  
Sbjct: 75  VAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQP--VVDTDPQLFDATIAVNLRA 132

Query: 130 AFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             L      + M  AG  G+II+ AS   +      +AY +SK G+V   K  A ELG  
Sbjct: 133 PALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPH 192

Query: 189 GIRVNCVSPYAVSSPMAKGFL 209
           GIR N V P  V + M +   
Sbjct: 193 GIRANSVCPTVVLTEMGQRVW 213

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  200 bits (512), Expect = 1e-64
 Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 2/205 (0%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           ++   S   R  GK  +ITG +  IG  AA +F+K GA+V I    +D  E   + I  +
Sbjct: 14  LVPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA 73

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A   + V  DVT+    ++ +NT ++++GK+DI+ NNAG          D     ++
Sbjct: 74  GVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQ 133

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTAS-VCGVIGGVTSHAYTSSKHGVVGLMK 179
           +   +N       T+     +    +G I++ +S V G         Y  +K  +    +
Sbjct: 134 KTFKLNFQAVIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPM 204
            TA++L + G+RVN VSP AV++  
Sbjct: 193 CTAIDLIQHGVRVNSVSPGAVATGF 217

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  198 bits (507), Expect = 5e-64
 Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 10/211 (4%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           PR   K  +ITG +  IG   A LF++ GA V I     +  E   + I  S  S    +
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-----DNDQAEFERIL 123
            V  DVT E   +  +N+ + Q+GK+D++ NNAG    A P+       D     + + L
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA---AIPDAFGTTGTDQGIDIYHKTL 118

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTAS-VCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            +NL      TK     +  A +G I++ +S V G         Y  +K  +    ++TA
Sbjct: 119 KLNLQAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTA 177

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           ++L +FGIRVN VSP  V +         D 
Sbjct: 178 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQ 208

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  198 bits (505), Expect = 9e-64
 Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 20/222 (9%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS- 63
            S    L GKVA ITG A   G   A   +  GA ++  D+ D +        +    + 
Sbjct: 5   RSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAA 64

Query: 64  ------ANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND 115
                   G        DV   + +  A+   + + G+LDI+  NAGI        +   
Sbjct: 65  TVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA------PMSAG 118

Query: 116 QAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSH----AYTSS 170
              +  ++ VNL G +   K A   +   G  GSI+  +S  G+ G  ++      Y ++
Sbjct: 119 DDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAA 178

Query: 171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLD 212
           KHGVVGLM+  A  L    IRVN + P  V +PM       +
Sbjct: 179 KHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTRE 220

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  196 bits (502), Expect = 2e-63
 Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 6/206 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+G  AL+TGG+  IG       +  GA+V      +   +   E       +  G   
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEG--- 74

Query: 70  VHCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
             CD+    + +  + T    + GKL+I+ NNAG+V   K    D  + ++  I+  N  
Sbjct: 75  SVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV-IHKE-AKDFTEKDYNIIMGTNFE 132

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            A+  ++ A  ++K +  G++I  +S+ G     +   Y++SK  +  + K+ A E  + 
Sbjct: 133 AAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKD 192

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
            IRVN V+P  + +P+ +  +K +  
Sbjct: 193 NIRVNSVAPGVILTPLVETAIKKNPH 218

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  195 bits (497), Expect = 1e-62
 Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 8/207 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GK ALITG +  IG+  A  +++ GA+V +A    D  + V ++I+     A     
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKA---LP 85

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           + CDVT+   +   ++    + G +DI   NAGIV      +LD    EF+RI   N+ G
Sbjct: 86  IRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA--MLDMPLEEFQRIQDTNVTG 143

Query: 130 AFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSH--AYTSSKHGVVGLMKNTAVELG 186
            FL  + AAR M   G  G+II+TAS+ G I  +      Y +SK  VV L K  AVEL 
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA 203

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDD 213
              IRVN VSP  + + + +       
Sbjct: 204 PHQIRVNSVSPGYIRTELVEPLADYHA 230

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  195 bits (497), Expect = 1e-62
 Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 5/205 (2%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISS 59
           +   N     +  K A+ITG    IG   AR  +K GA +++      D   +V ++++ 
Sbjct: 13  LGTENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG 72

Query: 60  SSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
            SS      +   D+TK  +I + +     ++G  DI+ NNAG+    K  I D    ++
Sbjct: 73  LSSGT--VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEK--IEDFPVEQW 128

Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           +RI++VNL  +F   + A   MK  G G II+ AS  G++      AY ++KHG++GL K
Sbjct: 129 DRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTK 188

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPM 204
             A+E+   G+ VN + P  V +P+
Sbjct: 189 TVALEVAESGVTVNSICPGYVLTPL 213

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  194 bits (496), Expect = 2e-62
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 17/213 (7%)

Query: 6   SMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS 63
           SM    + +G  A+++GGAG +GE   R     G  V+IAD+  + G+++ +++ +    
Sbjct: 21  SMVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR--- 77

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN---DQAEFE 120
                +V  +VT E  +  A+  A         +  + G     +    D    D   F 
Sbjct: 78  ---AEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFT 134

Query: 121 RILSVNLVGAFLGTKHAARVMKPA------GRGSIISTASVCGVIGGVTSHAYTSSKHGV 174
           + + + L G +   +  A  +  A       RG+++ TAS+ G  G +   AY ++K GV
Sbjct: 135 KTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGV 194

Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
           +GL    A +L   GIRVN ++P  + +P+ + 
Sbjct: 195 IGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES 227

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  193 bits (492), Expect = 7e-62
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 10/202 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG--C 67
            L+GKVA +TG +G IG   A  +++ GA V I        E              G   
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK-----TYGVHS 85

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
               C+++  K +E  ++     +G +D+   NAG+     P I  ++   + +I+SV+L
Sbjct: 86  KAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDL 145

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--GVTSHAYTSSKHGVVGLMKNTAVEL 185
            G +  + +  ++ K  G+GS+I T+S+ G I         Y ++K     L K+ A+E 
Sbjct: 146 NGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEW 205

Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
             F  RVN +SP  + + +   
Sbjct: 206 APFA-RVNTISPGYIDTDITDF 226

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  191 bits (487), Expect = 2e-61
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 7/198 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M+ RL+ K+A+ITGGA  IG   A  F+  GA + IAD+           I +       
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLT 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V CDV++  D+E      +S +G+ DI+ NNAGI         +    ++++   +N
Sbjct: 59  ---VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP--FDELTFEQWKKTFEIN 113

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           +   FL  K     MK  G G II+  S    +       Y S+K   +G  +  A +LG
Sbjct: 114 VDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG 173

Query: 187 RFGIRVNCVSPYAVSSPM 204
           + GI VN ++P  V +  
Sbjct: 174 KDGITVNAIAPSLVRTAT 191

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  191 bits (487), Expect = 2e-61
 Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 5/205 (2%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
               MS  L G+VA++TG +  IG   AR     GA+V++     +   +V  +I ++  
Sbjct: 20  DDKHMS-SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG 78

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
            A       CD++    I       ++ +G+ D++ NNAG+     P +     AE++ +
Sbjct: 79  EA---ESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGP-LHTMKPAEWDAL 134

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           ++VNL   +L  +  A  M  A RG II+ +S+ G        AYT+SK G+ GLM + A
Sbjct: 135 IAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAA 194

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKG 207
            EL +  +RV+ V+P +V +    G
Sbjct: 195 EELRQHQVRVSLVAPGSVRTEFGVG 219

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  190 bits (484), Expect = 7e-61
 Identities = 37/202 (18%), Positives = 67/202 (33%), Gaps = 5/202 (2%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
               L   VA++TGG+  IG     L  + GA V       +   +    +      A  
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGAR- 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSV 125
                CDV     +           G   I+ NNAG     + +   +     +   L +
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQ---GRVSTFAETTDEAWSEELQL 117

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
                    +     ++     +I+   S+          A ++++ GV  L+++ A E 
Sbjct: 118 KFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEF 177

Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
              G+RVN +    V S   + 
Sbjct: 178 APKGVRVNGILIGLVESGQWRR 199

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  191 bits (487), Expect = 8e-61
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 6/199 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              G+ A++TGGA  IG   A  F++ GA+++++D+     E     +      A+G   
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHG--- 84

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V CDV    ++    + A    G +D++F+NAGIV      +   +  ++  ++ ++L G
Sbjct: 85  VVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP--LAQMNHDDWRWVIDIDLWG 142

Query: 130 AFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           +    +     +   G  G I  TAS  G++       Y  +K+GVVGL +  A E+   
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202

Query: 189 GIRVNCVSPYAVSSPMAKG 207
           GI V+ + P  V + +   
Sbjct: 203 GIGVSVLCPMVVETKLVSN 221

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  190 bits (485), Expect = 9e-61
 Identities = 57/222 (25%), Positives = 84/222 (37%), Gaps = 27/222 (12%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS-- 63
           SM  R+Q KV L+TGGA   G   A   ++ GA +++ DI  D+  +     +S      
Sbjct: 4   SMG-RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEA 62

Query: 64  -----ANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ 116
                  G        DV     +   +  AV+++GKLD++  NAGI     P       
Sbjct: 63  GLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC----PLGAHLPV 118

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH----------- 165
             F     V+ VG       A   +      SII+T SV G+I                 
Sbjct: 119 QAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPPGAGGPQGPGGA 176

Query: 166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
            Y+ +K  V       A +L    IR N + P  V++ M   
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS 218

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  188 bits (481), Expect = 2e-60
 Identities = 61/192 (31%), Positives = 86/192 (44%), Gaps = 6/192 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           KVAL+TG    IG+  A    K G  V IAD  D   ++V  +I+ +   A     V  D
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA---VKVD 59

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           V+    +  AV  A    G  D++ NNAG+       I        +++ ++N+ G   G
Sbjct: 60  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP--IESITPEIVDKVYNINVKGVIWG 117

Query: 134 TKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            + A    K  G  G II+  S  G +G      Y+SSK  V GL +  A +L   GI V
Sbjct: 118 IQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 177

Query: 193 NCVSPYAVSSPM 204
           N   P  V +PM
Sbjct: 178 NGYCPGIVKTPM 189

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  188 bits (480), Expect = 3e-60
 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 8/207 (3%)

Query: 7   MSPR--LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           M+ R  L+G  AL+TGG+  IG       +  GA V                  S     
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
                  CD++   + +  +NT  + + GKL+I+ NNAGIV   K    D    ++  I+
Sbjct: 61  EA---SVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKE-AKDYTVEDYSLIM 115

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           S+N   A+  +  A   +K + RG+++  +SV G +       Y ++K  +  L +  A 
Sbjct: 116 SINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAF 175

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLK 210
           E  +  IRVN V P  +++ + +  ++
Sbjct: 176 EWAKDNIRVNGVGPGVIATSLVEMTIQ 202

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  188 bits (479), Expect = 4e-60
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 11/202 (5%)

Query: 6   SMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS 63
            M+    L G+ A++TGG+  IG   AR   K GA V IAD+     ++V   + +   +
Sbjct: 3   HMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFA 62

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
                 V  DVTK   ++ A+  A+   G  D++  NAG+        +D    E++   
Sbjct: 63  ------VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRP--AVDITDEEWDFNF 114

Query: 124 SVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
            VN  G FL  + A R    +   G I++TAS+   +G      Y++SK  V G  +  A
Sbjct: 115 DVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALA 174

Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
            E+    IRVNCV P  V + M
Sbjct: 175 REMAPKNIRVNCVCPGFVKTAM 196

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  187 bits (477), Expect = 7e-60
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 3/200 (1%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           MS   Q  +A+ITG +  IG   A   +  G +V++        E V ++I  S+     
Sbjct: 1   MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  D+T     +  +     +YG +DI+ N A +        L      F +I+ +N
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAM---FMDGSLSEPVDNFRKIMEIN 117

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           ++  +   K    +MK    G I + AS     G      Y S+K  ++GL ++   EL 
Sbjct: 118 VIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELA 177

Query: 187 RFGIRVNCVSPYAVSSPMAK 206
             GIRV  + P  V++ MAK
Sbjct: 178 PLGIRVTTLCPGWVNTDMAK 197

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  187 bits (477), Expect = 9e-60
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 18/198 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R Q KV +ITG +  IG    R +     +V+                S   S+      
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR------------SIKPSADPDIHT 72

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVNLV 128
           V  D++K +  +  V   + ++G++D + NNAG+         ++  Q +++  L VN+ 
Sbjct: 73  VAGDISKPETADRIVREGIERFGRIDSLVNNAGV---FLAKPFVEMTQEDYDHNLGVNVA 129

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIG--GVTSHAYTSSKHGVVGLMKNTAVELG 186
           G F  T+ AA  M   G G I+S  +        G+ S   + +K G+  + ++ A+E  
Sbjct: 130 GFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFS 189

Query: 187 RFGIRVNCVSPYAVSSPM 204
           R G+RVN VSP  + +PM
Sbjct: 190 RSGVRVNAVSPGVIKTPM 207

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  185 bits (473), Expect = 2e-59
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 14/205 (6%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   L G+  L+TG    IG    +     GA+V+         +S+  +         G
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------G 53

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  D+        A   A+   G +D++ NNA +        L+  +  F+R   VN
Sbjct: 54  IEPVCVDLGDW----EATERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVN 107

Query: 127 LVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L      ++  AR +   G  G+I++ +S C          Y S+K  +  L K  A+EL
Sbjct: 108 LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLK 210
           G   IRVN V+P  V + M +    
Sbjct: 168 GPHKIRVNAVNPTVVMTSMGQATWS 192

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  185 bits (472), Expect = 3e-59
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 7/194 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GK AL+TG    IG   A++ ++ GA +++    D        +I+     A    + 
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKA---VHH 56

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D++    IE     A  ++G +DI+ NNAGI   A   +       +++I+++NL   
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP--VEQFPLESWDKIIALNLSAV 114

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F GT+ A   M+    G II+ ASV G++G     AY ++KHGVVGL K   +E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174

Query: 191 RVNCVSPYAVSSPM 204
             N + P  V +P+
Sbjct: 175 TCNAICPGWVLTPL 188

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  185 bits (472), Expect = 3e-59
 Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           MS   +     + G    IG   A+ F+  G  V       +    +  +I ++      
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVA 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
                 D   E ++   +N A   +  L++   N G        IL+     F ++  + 
Sbjct: 61  ---RSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANVNFP--ILETTDRVFRKVWEMA 114

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
               F+  + +AR+M   G+G I  T +   + GG    A+ S+K G+  + ++ A EL 
Sbjct: 115 CWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELM 174

Query: 187 RFGIRV-NCVSPYAVSSPMAKG 207
              I V + +    V +   + 
Sbjct: 175 PKNIHVAHLIIDSGVDTAWVRE 196

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  185 bits (471), Expect = 6e-59
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADI--KDDLGESVCEDISSSSSSANGCSYV 70
            KVA++TGGA  IG   +   +  G  + +AD+  +++      + I ++   A     V
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVF---V 58

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT + + ++A++ A  + G  D++ NNAGI       +L+  + + ++I SVN+   
Sbjct: 59  GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK--PLLEVTEEDLKQIYSVNVFSV 116

Query: 131 FLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           F G + A+R     G  G II+ AS+  + G     AY+++K  V GL +  A EL   G
Sbjct: 117 FFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKG 176

Query: 190 IRVNCVSPYAVSSPM 204
             VN  +P  V + M
Sbjct: 177 HTVNAYAPGIVGTGM 191

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  184 bits (469), Expect = 8e-59
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 14/205 (6%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M     G  AL+TG    IG    +     GAKV+     +    S+ ++         G
Sbjct: 1   MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-------PG 53

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  D+       +A   A+   G +D++ NNA +V       L+  +  F+R  SVN
Sbjct: 54  IEPVCVDLGDW----DATEKALGGIGPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVN 107

Query: 127 LVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L   F  ++  AR M   G  GSI++ +S+   +       Y+S+K  +  L K  A+EL
Sbjct: 108 LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMEL 167

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLK 210
           G   IRVN V+P  V + M K    
Sbjct: 168 GPHKIRVNSVNPTVVLTDMGKKVSA 192

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  184 bits (469), Expect = 1e-58
 Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 10/208 (4%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           +    QGK A++ GG   +G    R   + GA+VL+    +     + E+          
Sbjct: 2   VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGP------R 55

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  D+    +I      A    G +D++  NAG+ +          +A ++R  +VN
Sbjct: 56  VHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEP--FDQVSEASYDRQFAVN 113

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
             GAF   +    +++    GSI+ T+SV    G      Y++SK  +V      A EL 
Sbjct: 114 TKGAFFTVQRLTPLIR--EGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELL 171

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             GIRVN VSP  + +P        + +
Sbjct: 172 PRGIRVNSVSPGFIDTPTKGVAGITEAE 199

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  183 bits (467), Expect = 3e-58
 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 17/214 (7%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           S  ++ KV +ITGG+  +G+  A  F+K GA+V+I     +  E    +I          
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQI--- 57

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERI 122
             V  DV    DI+  +     ++G++DI+ NNA        ++   N        +  +
Sbjct: 58  LTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVN-------GWNSV 110

Query: 123 LSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +++ L G F  ++   +     G  G+II+  +      G       ++K GV+ + K  
Sbjct: 111 INIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTL 170

Query: 182 AVELG-RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           AVE G ++GIRVN ++P  +        L + ++
Sbjct: 171 AVEWGRKYGIRVNAIAPGPIERTGGADKLWISEE 204

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  182 bits (465), Expect = 4e-58
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 20/206 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
               K  L+ GG+G++G    + F       +  D +++                     
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS--------------- 63

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
                + E++I++ +    S+  K+D     AG          D      + ++ +NL  
Sbjct: 64  FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYS 122

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG--R 187
           AF      A+++     G  + T +   +       AY ++K     ++K+ A E G   
Sbjct: 123 AFASAHIGAKLLN--QGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLP 180

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDD 213
            G     + P  + +P  + ++   +
Sbjct: 181 AGSTSLGILPVTLDTPTNRKYMSDAN 206

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  182 bits (465), Expect = 5e-58
 Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 5/195 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSY 69
           L+GKVA++TG    IG   A   +  GA +++    D    E V   +++         Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK--VLY 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D++K + +   V+ AV Q G++DI+ NNAGI   A   I D    +++ IL++NL  
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSA 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F GT  A   MK  G G II+ AS  G++      AY ++KHGVVG  K TA+E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 190 IRVNCVSPYAVSSPM 204
           I  N + P  V +P+
Sbjct: 178 ITANAICPGWVRTPL 192

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  182 bits (465), Expect = 6e-58
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 6/189 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L GK AL+TG A  +G   A   +  GA+V++ DI+  L     + ++     A     
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA---HG 62

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DVT E  IE A +   ++   +DI+ NNAGI       +++ +   +++++  NL  
Sbjct: 63  VAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKP--MVELELENWQKVIDTNLTS 120

Query: 130 AFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           AFL ++ AA+ M      G II+  S+       T   YT++K G+  L  + A E  +F
Sbjct: 121 AFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF 180

Query: 189 GIRVNCVSP 197
            I+ N + P
Sbjct: 181 NIQTNAIGP 189

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  182 bits (464), Expect = 7e-58
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 11/209 (5%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSAN 65
           M P L+GK  LITG +  IG   ARLF++ GAKV +   K     +     + +    A 
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
                  D+   +  +  V+  V+++G +D++ NNAG +   KP + + D   ++ ++  
Sbjct: 61  F---FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKP-LPEIDDTFYDAVMDA 116

Query: 126 NLVGAFLGTKHAARVMKPAGR-----GSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMK 179
           N+    + TK A   +  A +      ++IST S+ G  GG      Y ++K  +  + K
Sbjct: 117 NIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHK 176

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKGF 208
           N      + G+R N VSP  V +      
Sbjct: 177 NWVDFHTKDGVRFNIVSPGTVDTAFHADK 205

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  181 bits (462), Expect = 1e-57
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 10/197 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL G  A +TG    IG    R F+  GA++++ D +    +   +++      A   + 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG-----AAVAAR 62

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DVT  + +  A          + I+ N+AGI        L+ D A + ++++VN+ G
Sbjct: 63  IVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHD--ALETDDATWRQVMAVNVDG 119

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGV--TSHAYTSSKHGVVGLMKNTAVELGR 187
            F  ++   R M   G G+I++  S+ G I      + +Y +SK  V  L +  A E   
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAG 179

Query: 188 FGIRVNCVSPYAVSSPM 204
            G+RVN ++P  V++ M
Sbjct: 180 RGVRVNALAPGYVATEM 196

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  180 bits (458), Expect = 4e-57
 Identities = 35/203 (17%), Positives = 72/203 (35%), Gaps = 12/203 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHC 72
            +AL+T      G  A    ++ G  V+  D    D  E    +  +             
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----------PGT 51

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEFERILSVNLVGAF 131
               E+  E  V+  +     +D + +N  I     +  +    +A+  ++     +   
Sbjct: 52  IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
           L  + A   ++ AG  S+I   S  G      +  Y  ++   V L+++ A  L R GI 
Sbjct: 112 LLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGIL 171

Query: 192 VNCVSPYAVSSPMAKGFLKLDDD 214
           +  + P   ++P        +++
Sbjct: 172 LYAIGPNFFNNPTYFPTSDWENN 194

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  180 bits (458), Expect = 6e-57
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 8/207 (3%)

Query: 6   SMSPR--LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS 63
             S R  L+ K  L+TGG   IG      F+  GA +      +                
Sbjct: 5   EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
             G     CD +   + E  + T  S +G KLDI+ NN G +  +KP  LD    +F   
Sbjct: 65  VTG---SVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKP-TLDYTAEDFSFH 119

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           +S NL  A+  ++ A  ++K +G G+II  +S+ GV+       Y+++K  +  L +N A
Sbjct: 120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKGFL 209
            E    GIR N V+P  +++P+A+   
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVY 206

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  179 bits (456), Expect = 8e-57
 Identities = 42/208 (20%), Positives = 73/208 (35%), Gaps = 16/208 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L  K  +     G IG   +R   K   K  +   + +   ++ E  + +       ++
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK--VNITF 59

Query: 70  VHCDVT-KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
              DVT    + +  +     Q   +DI+ N AGI+D+           + ER +++N  
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH----------QIERTIAINFT 109

Query: 129 GAFLGTKHAARVM---KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           G    T          K    G I +  SV G         Y++SK  VV    + A   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
              G+    ++P    +P+   F    D
Sbjct: 170 PITGVTAYSINPGITRTPLVHTFNSWLD 197

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  179 bits (457), Expect = 1e-56
 Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 13/196 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK  L+TG A  IG  A  LF++ GA ++  D ++ L       + +          
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE------AIA 56

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
           V  DV+  K +E     A+ ++G+L  + + AG+   A   +  N     +E++L VNL 
Sbjct: 57  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV---AHSALSWNLPLEAWEKVLRVNLT 113

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           G+FL  + A  V++  G   ++ T SV G+ G      Y + K GVVGL +  A+EL R 
Sbjct: 114 GSFLVARKAGEVLEEGGS--LVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARK 170

Query: 189 GIRVNCVSPYAVSSPM 204
           G+RVN + P  + +PM
Sbjct: 171 GVRVNVLLPGLIQTPM 186

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  178 bits (455), Expect = 2e-56
 Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 4/204 (1%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   + GKVA+ITG +  IG   A  F+K GA +++   + D        +         
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVR-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DV   + ++  V +  S +G  DI+ NNAG     +  I++    +++    + 
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGT-GSNET-IMEAADEKWQFYWELL 116

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           ++ A    +     M+  G G+II  AS+C V        Y  +K  ++   K  A E+ 
Sbjct: 117 VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLK 210
           +  IRVNC++P  + +P      K
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAK 200

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  180 bits (459), Expect = 2e-56
 Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 15/215 (6%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
             Q   M+ RLQGKVA ITG A   G   A   ++ GA ++  D+      ++     S 
Sbjct: 35  RGQGARMN-RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQ-PNLDYAQGSP 92

Query: 61  SS--------SANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN 110
                        G        DV     ++  V+ A++++G +DI+ +N GI ++ +  
Sbjct: 93  EELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGE-- 150

Query: 111 ILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTS 169
           ++     ++  IL  NL+GA+   +     M   G+ GS+I  +S  G+ G      Y +
Sbjct: 151 VVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAA 210

Query: 170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           SKHGV GLM + A E+GR  IRVN V+P AV++ M
Sbjct: 211 SKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  178 bits (453), Expect = 4e-56
 Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)

Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS 61
           + A      ++G VA+ITGGA  +G   A      GA  ++ D+ +  GE+  + + ++ 
Sbjct: 3   MAAACR--SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN- 59

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ----A 117
                C +   DVT EKD++ A+  A  ++G++D+  N AGI   +K   L   Q     
Sbjct: 60  -----CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLE 114

Query: 118 EFERILSVNLVGAFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSK 171
           +F+R+L VNL+G F   +  A  M      +   RG II+TASV    G V   AY++SK
Sbjct: 115 DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASK 174

Query: 172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
            G+VG+    A +L   GIRV  ++P    +P+   
Sbjct: 175 GGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS 210

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  177 bits (451), Expect = 5e-56
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 17/199 (8%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              GK   +TG    IG   A  F + GAKV   D              + +      + 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD-------------QAFTQEQYPFAT 50

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVNLV 128
              DV     +       +++  +LD + N AGI    +        + ++++  +VN+ 
Sbjct: 51  EVMDVADAAQVAQVCQRLLAETERLDALVNAAGI---LRMGATDQLSKEDWQQTFAVNVG 107

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   +      +    G+I++ AS       +   AY +SK  +  L  +  +EL   
Sbjct: 108 GAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGS 167

Query: 189 GIRVNCVSPYAVSSPMAKG 207
           G+R N VSP +  + M + 
Sbjct: 168 GVRCNVVSPGSTDTDMQRT 186

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  176 bits (449), Expect = 1e-55
 Identities = 66/208 (31%), Positives = 100/208 (48%), Gaps = 18/208 (8%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           +L+ +V ++TG +  +G    R+ ++ GA VL  D+K   GE    ++ ++        +
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA------VRF 57

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ----AEFERILSV 125
            + DVT E D   A+  A  ++G +  + N AG     K  IL          F R ++V
Sbjct: 58  RNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEK--ILGRSGPHALDSFARTVAV 115

Query: 126 NLVGAFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           NL+G F   + AA VM          RG I++TAS+    G +   AY +SK GV  L  
Sbjct: 116 NLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL 175

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKG 207
             A EL RFGIRV  ++P    +PM  G
Sbjct: 176 PAARELARFGIRVVTIAPGIFDTPMMAG 203

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  176 bits (448), Expect = 2e-55
 Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 6/204 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSY 69
            Q K AL+TG +  +G+ AA   +++G  ++I   +         E+I            
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLV--- 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  +V +   I+         +G+LD+  NNA         +++ ++  ++  +++N   
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP--VMELEETHWDWTMNINAKA 116

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
                + AA++M+  G G I+S +S+  +           SK  +  L +  AVEL    
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQ 176

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDD 213
           I VN VS  A+ +   K F   +D
Sbjct: 177 IIVNAVSGGAIDTDALKHFPNRED 200

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  177 bits (451), Expect = 2e-55
 Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 7/208 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG--C 67
            LQG+VA++TGGA  IG+   +   + G+ V+IA  K +  +S  +++ ++         
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVN 126
             + C++  E+++ N V + +  +GK++ + NN G       +  ++     +  +L  N
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG---QFLSPAEHISSKGWHAVLETN 131

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G F   K           GSI++   V    G   +    +++ GV  L K+ A+E  
Sbjct: 132 LTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 190

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             GIR+NCV+P  + S  A         
Sbjct: 191 CSGIRINCVAPGVIYSQTAVENYGSWGQ 218

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  175 bits (445), Expect = 9e-55
 Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS-- 62
            SM+   +GK ALITGGA  +G   A   ++ GA + I D  ++  + V   ++++    
Sbjct: 3   GSMA-DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENS-DVVGYPLATADDLA 60

Query: 63  ------SANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN 114
                    G  C     DV     +E+ V  A    G +DI   NAGI   +   +L  
Sbjct: 61  ETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI---STIALLPE 117

Query: 115 -DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG 173
            + A+++ ++  NL G F      A  M     G I++ +S+ G        +Y SSK G
Sbjct: 118 VESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWG 177

Query: 174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           V+GL K  A +L  +GI VN V+P  + +PM
Sbjct: 178 VIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  175 bits (447), Expect = 1e-54
 Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 17/218 (7%)

Query: 5   NSMSPR--LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
            +M P    QGKVA ITGG   +G+    L S  GA+ +IA  K D+ ++  E ISS + 
Sbjct: 16  KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 75

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQA 117
           +      + CDV     ++N V+  +   G  +I+ NNA        +   PN       
Sbjct: 76  NK--VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN------- 126

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
            ++ I  + L G    T    + +  A +  + +S  ++    G        S+K GV  
Sbjct: 127 AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEA 186

Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           + K+ A E G++G+R N + P  + +  A   L     
Sbjct: 187 MSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT 224

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  173 bits (442), Expect = 2e-54
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 14/205 (6%)

Query: 10  RLQGKVALITGGAGS--IGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANG 66
            L+GKV ++TG +G   +G  AAR  ++ GA V I    +    E   +++        G
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEK----TYG 72

Query: 67  --CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                  C V   +  E  V   V+ +G++D    NAG   ++   ILD     +  ++ 
Sbjct: 73  IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG--ILDGSVEAWNHVVQ 130

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH--AYTSSKHGVVGLMKNTA 182
           V+L G F   K      K  G GS++ TAS+ G I        +Y  +K G + + ++ A
Sbjct: 131 VDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLA 190

Query: 183 VELGRFGIRVNCVSPYAVSSPMAKG 207
            E   F  RVN +SP  + + ++  
Sbjct: 191 NEWRDF-ARVNSISPGYIDTGLSDF 214

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  173 bits (440), Expect = 4e-54
 Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 9/198 (4%)

Query: 2   LQANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISS 59
           L   SM+    L G+ A++TG    IG   A  +++ GA VL     D + E V ++I+ 
Sbjct: 18  LYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKE-VADEIAD 76

Query: 60  SSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF 119
              SA     V  D+   +   N     ++   ++D++ NNAGI+  A     +     +
Sbjct: 77  GGGSAEA---VVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAP--AEEVSLGRW 130

Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
             +L+VNL  A++ ++     M   G G I++ AS+    GG    AY +SKH VVGL +
Sbjct: 131 REVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTR 190

Query: 180 NTAVELGRFGIRVNCVSP 197
             A E    G+ VN ++P
Sbjct: 191 ALASEWAGRGVGVNALAP 208

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  173 bits (440), Expect = 4e-54
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG--C 67
            L+G+VAL+TGG+  +G   A+  ++ G  V++A    +      + ++       G   
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE----KYGVET 73

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
               CDV+  ++++  +     ++GKLD + N AGI         +    EF +++ VNL
Sbjct: 74  MAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNL 131

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYTSSKHGVVGLMKNTAVELG 186
            G +   + A  +++ +   SII+  S+      +    AY +SK GV  L K  A E G
Sbjct: 132 FGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 191

Query: 187 RFGIRVNCVSP 197
           R+GIRVN ++P
Sbjct: 192 RYGIRVNVIAP 202

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  172 bits (438), Expect = 7e-54
 Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 20/208 (9%)

Query: 4   ANSMSP----RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISS 59
            + M+P        K  ++TGG   IG    R  +  GA V +          V E +  
Sbjct: 1   GSHMAPGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK 60

Query: 60  SSSSANG--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
                 G       CDV+    +   +    +  G +  +  NAG+         +    
Sbjct: 61  ----EFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP--ATELTHE 114

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSH-------AYTS 169
           +F  +  VN+ G F   +  A++     + GSI+ T+S+   I   +S         Y S
Sbjct: 115 DFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNS 174

Query: 170 SKHGVVGLMKNTAVELGRFGIRVNCVSP 197
           SK     L+K  A E    GIRVN +SP
Sbjct: 175 SKAACSNLVKGLAAEWASAGIRVNALSP 202

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  172 bits (439), Expect = 7e-54
 Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 14/209 (6%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+ KVA ITGG   IG   A +F +HG   +IA        +    ++ ++     C  +
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR--CLPL 82

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGI-----VDEAKPNILDNDQAEFERILSV 125
             DV     +  AV+ A+ ++G++DI+ N A             N        F+ ++ +
Sbjct: 83  SMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFN-------AFKTVMDI 135

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           +  G F  ++           G I++  +  G  G        S+K  V  + ++ AVE 
Sbjct: 136 DTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEW 195

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           G   IRVN ++P  +S       L     
Sbjct: 196 GPQNIRVNSLAPGPISGTEGLRRLGGPQA 224

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  173 bits (441), Expect = 9e-54
 Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 10/207 (4%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           S+     G+ A +TGGA  +G    R     G KV IADI+ D  +     + +  S   
Sbjct: 2   SLK-DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPE 60

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DV   +  + A +   +++G + I+ NNAG+       I ++   +++ +L V
Sbjct: 61  -VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQP--IEESSYDDWDWLLGV 117

Query: 126 NLVGAFLGTKHAARVMK------PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           NL G   G       M           G +++TAS+   +   +   Y ++K  V GL +
Sbjct: 118 NLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSE 177

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAK 206
           +    L ++ I V+ + P  V S +  
Sbjct: 178 SLHYSLLKYEIGVSVLCPGLVKSYIYA 204

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  171 bits (436), Expect = 1e-53
 Identities = 39/191 (20%), Positives = 65/191 (34%), Gaps = 10/191 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
             A++T      G  +A   S+ G  V   D      + +          A   +Y    
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAFAETYPQLK 52

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
              E++    +    S YG++D++ +N     E +P I      ++   +    +  F  
Sbjct: 53  PMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFAL 111

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
               A  MK    G II   S            YTS++ G   L    + ELG + I V 
Sbjct: 112 VNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVF 171

Query: 194 CVSPYAVSSPM 204
            + P  + S  
Sbjct: 172 AIGPNYLHSED 182

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  171 bits (435), Expect = 3e-53
 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 7/207 (3%)

Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSS 60
           L   SM  +    VA++TGG   IG   AR  +  G  + I  I D +    V  ++S  
Sbjct: 18  LYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL 77

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
            +       +  D+      +  V+  V+++G++D + NNAGI    + + LD     F+
Sbjct: 78  GARVIF---LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFD 134

Query: 121 RILSVNLVGAFLGTKHAARVM---KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
            I+ VNL G    T+   + M         SII+  SV  V+       Y  SK G+   
Sbjct: 135 TIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAF 194

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPM 204
            +  A+ L   GI V  V P  + S M
Sbjct: 195 SQGLALRLAETGIAVFEVRPGIIRSDM 221

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  170 bits (433), Expect = 4e-53
 Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 8/200 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           + G++ LITG    IG   A  F+K  +K+++ DI     E          +        
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKV---HTF 85

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D +  +DI ++     ++ G + I+ NNAG+V      +      + E+   VN++  
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSD-LFATQDPQIEKTFEVNVLAH 143

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL---GR 187
           F  TK     M     G I++ AS  G +      AY SSK   VG  K    EL     
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203

Query: 188 FGIRVNCVSPYAVSSPMAKG 207
            G++  C+ P  V++   K 
Sbjct: 204 TGVKTTCLCPNFVNTGFIKN 223

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  168 bits (428), Expect = 1e-52
 Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 12/201 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAK-------VLIADIKDDLGESVCEDISSSSSSANG 66
            + LITG    IG   A  F++           ++++       E +  +  +  +    
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT-- 60

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  D++   D+       V +YG +D + NNAG+       + D  + +F+  ++ N
Sbjct: 61  -DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTN 117

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G F  T+    +M+    G I    SV        S  Y  SK G  GL++   +   
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 177

Query: 187 RFGIRVNCVSPYAVSSPMAKG 207
           +  +R+  V P AV +PM   
Sbjct: 178 KCNVRITDVQPGAVYTPMWGK 198

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  166 bits (424), Expect = 4e-52
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 9/202 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           +     ++TG    +G        + G +V +   +    +     +       N    +
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------GNAVIGI 54

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+   +D++ A   AV   G  +++ + AG  +     +      +  R++  NLV  
Sbjct: 55  VADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGP--VGVYTAEQIRRVMESNLVST 112

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            L  +   R++     G + +  S    +G      Y +SK G+ G +++   EL    +
Sbjct: 113 ILVAQQTVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPL 171

Query: 191 RVNCVSPYAVSSPMAKGFLKLD 212
           R+  + P  + S        +D
Sbjct: 172 RLVNLYPSGIRSEFWDNTDHVD 193

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  165 bits (420), Expect = 4e-51
 Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 15/213 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-------ESVCEDISSSSS 62
            L GK   ITG +  IG   A   ++ GA V IA               S    ++++  
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
                  + CD+ +E  +  AV   V  +G +DI+ NNA  +       LD     F+ +
Sbjct: 63  QGLA---LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLR--GTLDTPMKRFDLM 117

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH--AYTSSKHGVVGLMKN 180
             VN  G+F+  +     +  A    I++ A    +          YT +K G+  +   
Sbjct: 118 QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLG 177

Query: 181 TAVELGRFGIRVNCVSP-YAVSSPMAKGFLKLD 212
            A E G  G+ +N + P   +++        +D
Sbjct: 178 LAAEFGPQGVAINALWPRTVIATDAINMLPGVD 210

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  164 bits (418), Expect = 5e-51
 Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 24/210 (11%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            ++  VA++TGGA  +G    +     GA+V++ DI+   GE V  D+           +
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR------ARF 56

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ----AEFERILSV 125
              DVT E  + +A++ A    G L I+ N AG  +  +  +L  D     A F +I+ +
Sbjct: 57  AAADVTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIR--VLSRDGVFSLAAFRKIVDI 113

Query: 126 NLVGAFLGTKHAARVM--------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           NLVG+F   + AA  +            RG II+TASV    G +   AY++SK GVVG+
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGM 173

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
               A +L    IRV  ++P    +P+   
Sbjct: 174 TLPIARDLASHRIRVMTIAPGLFDTPLLAS 203

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  165 bits (419), Expect = 8e-51
 Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 16/214 (7%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-------ESVCEDI 57
            SMS  L+GK   I+GG+  IG   A+  +  GA V +     +          +  ++I
Sbjct: 3   GSMS--LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEI 60

Query: 58  SSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
             +   A     +  D+     +  AV   V Q+G +DI  NNA  ++    +I +    
Sbjct: 61  EEAGGQALP---IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLG--SIEEVPLK 115

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVG 176
            F+ +  + + G +  ++     MK      I++ +    +         Y  +K+G+  
Sbjct: 116 RFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTL 175

Query: 177 LMKNTAVELGRFGIRVNCVSP-YAVSSPMAKGFL 209
                A EL   GI  N + P   V++   +  L
Sbjct: 176 CALGIAEELRDAGIASNTLWPRTTVATAAVQNLL 209

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  164 bits (417), Expect = 1e-50
 Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 6/200 (3%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           SM   LQG+  ++TGG   IG   A +F++ GA V +A       ++   D+    S   
Sbjct: 4   SMF-DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK- 61

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DV+     +     AV ++G +D++  NAG+  +A   +      +   I +V
Sbjct: 62  -VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAP--LATMTPEQLNGIFAV 118

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVE 184
           N+ G F   +     +  +G G ++ T+S+ G I G    + Y ++K   +G M+  A+E
Sbjct: 119 NVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIE 178

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           L    I VN + P  + +  
Sbjct: 179 LAPHKITVNAIMPGNIMTEG 198

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  163 bits (416), Expect = 1e-50
 Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 12/196 (6%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADI--KDDLGESVCEDISSSSSSANGCSYV 70
           GKV L+TG +  IG+    +        ++  +   +   + + E             YV
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR------FFYV 55

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             D+T++  ++  VN AV  +GK+D +  NAG+++  +  + + D   ++++  +N    
Sbjct: 56  VGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQN-VNEIDVNAWKKLYDINFFSI 114

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
                 A   +K    G+++  +S    +   +  AY SSK  +       A E     +
Sbjct: 115 VSLVGIALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQV 171

Query: 191 RVNCVSPYAVSSPMAK 206
           +   V+P  V + M  
Sbjct: 172 KAIAVAPGIVDTDMQV 187

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  163 bits (416), Expect = 1e-50
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 10/201 (4%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSA 64
           S+  R   +  ++ G    IG   A  F++ GA V++      +   +   +I     SA
Sbjct: 2   SLQ-RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA 60

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                +  D+T   ++E A++ A  ++G++  + + AG +   K  I + D+A + ++L 
Sbjct: 61  LA---IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKT-IAEMDEAFWHQVLD 116

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-VTSHAYTSSKHGVVGLMKNTAV 183
           VNL   FL  K A   M   G   I++ +S  G  GG   + AY +SK  V+   +  A 
Sbjct: 117 VNLTSLFLTAKTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAK 174

Query: 184 ELGRFGIRVNCVSPYAVSSPM 204
           E+G   IRVN V P  +S+  
Sbjct: 175 EVGP-KIRVNAVCPGMISTTF 194

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  163 bits (415), Expect = 2e-50
 Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 12/201 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
            V  ITG A  IG     L ++ G  V+  D        +  D+S+          V   
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ---ADIEADLSTPGGRETA---VAAV 55

Query: 74  VTKEKD-----IENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
           + +        +  A     +    L +  N  G+            + +    + V  +
Sbjct: 56  LDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI 115

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            A         +++    G       +     G T  AY  SK+ V  L +   V+    
Sbjct: 116 AATQPGAAELPMVEAMLAGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGR 174

Query: 189 GIRVNCVSPYAVSSPMAKGFL 209
           G+R+N V+P AV +P+ +   
Sbjct: 175 GVRLNVVAPGAVETPLLQASK 195

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  163 bits (414), Expect = 2e-50
 Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 14/200 (7%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
             M   L     LITG +  +G   A    +HG +V+I+   +    +   ++       
Sbjct: 21  GHM--TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELR-----Q 70

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
            G   ++ D + E  I   ++   +Q   L  + +NA             +   F R+ S
Sbjct: 71  AGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASE---WLAETPGEEADNFTRMFS 127

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           V+++  +L   H   ++  +    I+  +      G     AY ++K G+  L  + A  
Sbjct: 128 VHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAAR 187

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
                ++VN ++P  +    
Sbjct: 188 FAP-LVKVNGIAPALLMFQP 206

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  162 bits (413), Expect = 8e-50
 Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 12/201 (5%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA--DIKDDLGESVCEDISSSSSSAN 65
           S RL+ + AL+TGG   IG  AA  +++ GA V I     +++  + V   I        
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE-----EC 98

Query: 66  G--CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           G     +  D++ E    + V+ A    G LDI+   AG    A P I D    +F++  
Sbjct: 99  GRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGK-QTAIPEIKDLTSEQFQQTF 157

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           +VN+   F  T+ A  ++      SII+T+S+           Y ++K  ++   +  A 
Sbjct: 158 AVNVFALFWITQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAK 215

Query: 184 ELGRFGIRVNCVSPYAVSSPM 204
           ++   GIRVN V+P  + + +
Sbjct: 216 QVAEKGIRVNIVAPGPIWTAL 236

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  161 bits (409), Expect = 9e-50
 Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 11/199 (5%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           + RL GK AL+TG A  IG+  A   +  GA V+++DI  +  ++    I          
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK------A 54

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSVN 126
             +  D++    ++       +  G +DI+ NNA IV         D D   + +I+ VN
Sbjct: 55  RAIAADISDPGSVKALFAEIQALTGGIDILVNNASIV---PFVAWDDVDLDHWRKIIDVN 111

Query: 127 LVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L G F+ T+     M+ AG+ G +IS AS     G     AY ++K GV+G  +  A EL
Sbjct: 112 LTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATEL 171

Query: 186 GRFGIRVNCVSPYAVSSPM 204
           G++ I  N V+P  + S  
Sbjct: 172 GKYNITANAVTPGLIESDG 190

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  160 bits (407), Expect = 2e-49
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 9/198 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
                  LITG +  IGE  ARL    G +V +    +   +++  ++        G   
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALP 54

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DV +E D   AV      +G+L  + NNAG+       + +    E+  +L  NL G
Sbjct: 55  LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKP--VHELTLEEWRLVLDTNLTG 112

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AFLG +HA   +   G G+I++  S+ G        AY +SK G++GL     ++L    
Sbjct: 113 AFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREAN 172

Query: 190 IRVNCVSPYAVSSPMAKG 207
           +RV  V P +V +  A  
Sbjct: 173 VRVVNVLPGSVDTGFAGN 190

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  160 bits (408), Expect = 2e-49
 Identities = 45/214 (21%), Positives = 91/214 (42%), Gaps = 13/214 (6%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI---ADIKDDLGESVCEDISSS 60
           + +    L+ KV +I GG  ++G   A+ F+     +++        D    + +++   
Sbjct: 2   SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ 61

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
            +          D++ E+++    + A  ++GK+DI  N  G V +    I++  +AEF+
Sbjct: 62  GAKVAL---YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKP--IVETSEAEFD 116

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
            + ++N   A+   K AA+ M P G   II+ A+            Y  +K  V    + 
Sbjct: 117 AMDTINNKVAYFFIKQAAKHMNPNGH--IITIATSLLAAYTGFYSTYAGNKAPVEHYTRA 174

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            + EL +  I VN ++P  + +     F   +  
Sbjct: 175 ASKELMKQQISVNAIAPGPMDTSF---FYGQETK 205

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  161 bits (410), Expect = 2e-49
 Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 5/199 (2%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           +   L  +  L+TGG   IG   A +F++ GA V +A        SV  ++      A  
Sbjct: 35  VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGN 92

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  DV+      +A  T V  +G LD++  NAGI  EA+  +      +   +L VN
Sbjct: 93  VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEAR--LDTMTPEQLSEVLDVN 150

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTAVEL 185
           + G     +     +  +GRG +I T+S+ G + G    + Y +SK   +G M+  A+EL
Sbjct: 151 VKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIEL 210

Query: 186 GRFGIRVNCVSPYAVSSPM 204
              G+ VN + P  + +  
Sbjct: 211 APRGVTVNAILPGNILTEG 229

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  160 bits (406), Expect = 4e-49
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 10/210 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            + G+V ++TG +  IG   A    K GA V I     D    V ++  S          
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP--- 58

Query: 70  VHCDVTKEKDIENAVNTAVS-QYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERIL 123
           V CD ++E ++ +        Q G+LD++ NNA    +   N  +        + ++ I 
Sbjct: 59  VVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           +V L G +  + + AR+M PAG+G I+  +S    +  + +  Y   K     L  + A 
Sbjct: 119 NVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAH 177

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           EL R G+    + P  V + + K  +  ++
Sbjct: 178 ELRRHGVSCVSLWPGIVQTELLKEHMAKEE 207

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  160 bits (407), Expect = 4e-49
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 15/217 (6%)

Query: 1   MLQANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS 58
           + + + M P   L G++AL+TGG+  IG+  A+   + GA+V I     +        +S
Sbjct: 15  VPRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS 74

Query: 59  SSSSSANG-CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
                A G C  +  D++ E               +LDI+ NNAG    A   +     +
Sbjct: 75  -----AYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA--LESYPVS 127

Query: 118 EFERILSVNLVGAFLGTKHAARVMK----PAGRGSIISTASVCGVIG-GVTSHAYTSSKH 172
            +E+++ +N+   F   +    +++          +I+  SV G+   G  ++AY  SK 
Sbjct: 128 GWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKA 187

Query: 173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
            +  L +  A EL    I VN ++P    S M +   
Sbjct: 188 ALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIA 224

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  160 bits (406), Expect = 5e-49
 Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 10/208 (4%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
           + + M+     +VAL+TG    IG   AR   K G +V +    ++   +  +++  +  
Sbjct: 13  RGSHMA-TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV 71

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFER 121
            A+G     CDV    +IE  V   V +YG +D++ NNAG                 +  
Sbjct: 72  EADG---RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR---PGGGATAELADELWLD 125

Query: 122 ILSVNLVGAFLGTKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           ++  NL G F  TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTK 185

Query: 180 NTAVELGRFGIRVNCVSPYAVSSPMAKG 207
              +EL R GI VN V P  V +PMA  
Sbjct: 186 ALGLELARTGITVNAVCPGFVETPMAAS 213

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  159 bits (405), Expect = 8e-49
 Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 7/202 (3%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           S   + + A +TG +  IG   AR  +  G  V           +  + + ++    +G 
Sbjct: 19  SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDG- 77

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
               CDVT   ++  AV  AV ++G + I+ N+AG     +    D D A +  +L  NL
Sbjct: 78  --SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE--TADLDDALWADVLDTNL 133

Query: 128 VGAFLGTKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
            G F  T+   R   M+ AG G I++ AS  G  G + +  YT+SKHGVVG  K+   EL
Sbjct: 134 TGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFEL 193

Query: 186 GRFGIRVNCVSPYAVSSPMAKG 207
            + GI VN V P  V +PMA+ 
Sbjct: 194 AKTGITVNAVCPGYVETPMAER 215

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  158 bits (401), Expect = 1e-48
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 16/200 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M+   + +  L+ GG G++G    + F      V   D+ ++   S    +         
Sbjct: 1   MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK-------- 52

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +    T++ D   A    +    K+D +   AG           +     + +   +
Sbjct: 53  ---MTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQS 108

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           +  + + +  A + +K    G +    +   + G      Y  +K  V  L ++ A +  
Sbjct: 109 IWTSTISSHLATKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS 166

Query: 187 --RFGIRVNCVSPYAVSSPM 204
               G     V P  + +PM
Sbjct: 167 GMPSGAAAIAVLPVTLDTPM 186

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  158 bits (401), Expect = 1e-48
 Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 28/204 (13%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           + AL+TGGA  +G  AA      G +V++ D++ +  +                 YV  D
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED---------------LIYVEGD 47

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ----AEFERILSVNLVG 129
           VT+E+D+  AV  A  +   L  + + AG+    K  IL  +       F R+L VNL+G
Sbjct: 48  VTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEK--ILGKEGPHGLESFRRVLEVNLLG 104

Query: 130 AFLGTKHAARVM------KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
            F   + AA  M          RG I++TASV    G +   AY +SK GVV L    A 
Sbjct: 105 TFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAAR 164

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKG 207
           EL  +GIRV  V+P    +P+ +G
Sbjct: 165 ELAGWGIRVVTVAPGLFDTPLLQG 188

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  157 bits (399), Expect = 5e-48
 Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 18/209 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M  RL+  +AL+TG    IG   +   +  GA V   D+     +     +    S    
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60

Query: 67  CSYVH----CDVTKEKDIENAVNTAVSQYGK-LDIMFNNAGIVDEAKPNILDN-----DQ 116
               H     DV++ +     +    + + +   ++ + AGI         D       +
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQ-------DEFLLHMSE 113

Query: 117 AEFERILSVNLVGAFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVV 175
            +++++++VNL G FL T+ AA+ +     RGSII+ +S+ G +G V    Y +SK GV+
Sbjct: 114 DDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVI 173

Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           GL +  A ELGR GIR N V P  +++PM
Sbjct: 174 GLTQTAARELGRHGIRCNSVLPGFIATPM 202

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  158 bits (401), Expect = 6e-48
 Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANG 66
           S +L+GK  LITGG   IG   +  F+K GA + IA +  +       + +        G
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE-----KEG 96

Query: 67  --CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
             C  +  D++ E+  ++ V   V Q G L+I+ NN       +  +      + E+   
Sbjct: 97  VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ-QYPQQGLEYITAEQLEKTFR 155

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           +N+   F  TK A   +K      II+TAS+    G  T   Y+++K  +V   ++ +  
Sbjct: 156 INIFSYFHVTKAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQS 213

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           L + GIRVN V+P  + +P+
Sbjct: 214 LVQKGIRVNGVAPGPIWTPL 233

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  155 bits (395), Expect = 3e-47
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 9/204 (4%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSA 64
                    V L+TGG+  IG    RL ++ G +V +    + +  ++V   I+ S   A
Sbjct: 19  YFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEA 78

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                +  DV    DI    +    Q+G+LD + NNAGIVD  +  + +      ER+L 
Sbjct: 79  VA---IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQR-VDEMSVERIERMLR 134

Query: 125 VNLVGAFLGTKHAARVMKPAGR---GSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKN 180
           VN+ G+ L    A R M        G+I++ +S+  ++G  T +  Y +SK  +      
Sbjct: 135 VNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIG 194

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A E+   GIRVN V P  + + +
Sbjct: 195 LAREVAAEGIRVNAVRPGIIETDL 218

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  155 bits (395), Expect = 3e-47
 Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 7/199 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            LQGK  ++TG +  IG   A   +K GA V++     +  + V        +++    Y
Sbjct: 25  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS--AHY 82

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +   +      E  V  A    G LD++  N         N+  +D     + + VN + 
Sbjct: 83  IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFLS 140

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG--R 187
             + T  A  ++K    GSI+  +S+ G +      AY++SK  + G   +   E    R
Sbjct: 141 YVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 199

Query: 188 FGIRVNCVSPYAVSSPMAK 206
             + +       + +  A 
Sbjct: 200 VNVSITLCVLGLIDTETAM 218

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  154 bits (392), Expect = 3e-47
 Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 13/198 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L+ K+A++TG  G +G    +  S+      +    + L  ++ E          G   
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIE--------GVEP 52

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  D+ KE   E  V+  +     +D + + A +  +    I     AE+   L +N++ 
Sbjct: 53  IESDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDT--TIEAGSVAEWHAHLDLNVIV 109

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               ++     ++ A  G +I   S  G      +  Y +SKH + GL      E    G
Sbjct: 110 PAELSRQLLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNG 168

Query: 190 IRVNCVSPYAVSSPMAKG 207
           IRV+ VSP   ++PM +G
Sbjct: 169 IRVSTVSPGPTNTPMLQG 186

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  154 bits (391), Expect = 4e-47
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 18/194 (9%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHC 72
           + AL+TGG+  IG   A      G +V IA    ++  +S+            G   +  
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL------------GAVPLPT 50

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+ K+ D +  V  A+   G L ++ + A +        L+    E+ R+L ++L  AFL
Sbjct: 51  DLEKD-DPKGLVKRALEALGGLHVLVHAAAVNVRKP--ALELSYEEWRRVLYLHLDVAFL 107

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGG--VTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
             + AA  M  AG G ++   SV     G  V   AYT++K  ++GL +  A E  R GI
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167

Query: 191 RVNCVSPYAVSSPM 204
           RVN + P  V +  
Sbjct: 168 RVNLLCPGYVETEF 181

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  162 bits (412), Expect = 4e-47
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 20/206 (9%)

Query: 7   MSP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG---------ESVCED 56
           MSP   + KV +ITG  G +G+  +  F+K GAKV++ D+   L          + V ++
Sbjct: 1   MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDE 60

Query: 57  ISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-D 115
           I  +   A      + +V    D +  V TAV  +G + ++ NNAGI+   +   +    
Sbjct: 61  IVKNGGVAVAD---YNNVL---DGDKIVETAVKNFGTVHVIINNAGIL---RDASMKKMT 111

Query: 116 QAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVV 175
           + +++ ++ V+L GAF  TK A    +    G I++T+S  G+ G      Y S+K  ++
Sbjct: 112 EKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALL 171

Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVS 201
           G  +  A E  ++ I+ N ++P A S
Sbjct: 172 GFAETLAKEGAKYNIKANAIAPLARS 197

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  149 bits (377), Expect = 4e-42
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 11/200 (5%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
            + + +  L+ KV LITG    +G+  A+ F+K+GAKV++ D KD       ++I ++  
Sbjct: 312 ASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGG 369

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEFER 121
            A        DV K  D E  +   + +YG +DI+ NNAGI+   +        + E++ 
Sbjct: 370 EAWP---DQHDVAK--DSEAIIKNVIDKYGTIDILVNNAGIL---RDRSFAKMSKQEWDS 421

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +  V+L+G F  ++ A         G II+  S  G+ G      Y+SSK G++GL K  
Sbjct: 422 VQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTM 481

Query: 182 AVELGRFGIRVNCVSPYAVS 201
           A+E  +  I+VN V+P+A +
Sbjct: 482 AIEGAKNNIKVNIVAPHAET 501

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  155 bits (393), Expect = 5e-47
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 9/204 (4%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSS 61
             +  S  L GKVAL TG    IG   A    + GA V++         E V  ++    
Sbjct: 11  GPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG 70

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
           +       +  D++K  ++    + AVS +G LD + +N+G+        L+  Q  F++
Sbjct: 71  AQGVA---IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD--ELEVTQELFDK 125

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKN 180
           + ++N  G F   +   +  +  GR  II T+S+  V+ G+ +HA Y  SK  V G  + 
Sbjct: 126 VFNLNTRGQFFVAQQGLKHCRRGGR--IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRA 183

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            AV+ G  G+ VNC++P  V + M
Sbjct: 184 FAVDCGAKGVTVNCIAPGGVKTDM 207

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  155 bits (393), Expect = 7e-47
 Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 24/225 (10%)

Query: 3   QANSMSPR---LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDIS 58
            ++ + PR   ++   A++TG A  IG   A    + G +V+I      +   S+ ++++
Sbjct: 10  HSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELN 69

Query: 59  SSSSSANGCSYVHCDVTKEK----DIENAVNTAVSQYGKLDIMFNNAGI--------VDE 106
                +N       D+T         E  +N+    +G+ D++ NNA           D 
Sbjct: 70  KER--SNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDH 127

Query: 107 AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP------AGRGSIISTASVCGVIG 160
              +     + +   ++  N +  FL T   A+  K       +   SI++         
Sbjct: 128 EDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187

Query: 161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA 205
            +    Y   KH +VGL ++ A+EL  +GIRVN V+P     P+A
Sbjct: 188 CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA 232

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  153 bits (389), Expect = 1e-46
 Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 21/200 (10%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+ K  LITG A  IG     LF+K GA+++  DI++       E +        G   
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHP 53

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILS 124
           V  DV     +E     A++  G+LD + + AGI         DN        ++E +L 
Sbjct: 54  VVMDVADPASVERGFAEALAHLGRLDGVVHYAGI-------TRDNFHWKMPLEDWELVLR 106

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           VNL G+FL  K A+  M+    GSI+ TAS   + G +    Y +S  GVVGL +  A+E
Sbjct: 107 VNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALE 165

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           LGR+GIRVN ++P  + + M
Sbjct: 166 LGRWGIRVNTLAPGFIETRM 185

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  155 bits (393), Expect = 3e-46
 Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 19/221 (8%)

Query: 1   MLQANSMSP---RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG------- 50
           M + ++M P   RL G    ITG +  IG+  A   +K GA ++IA              
Sbjct: 30  MGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTI 89

Query: 51  ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN 110
            +  E+I +    A        DV  E+ I  AV  A+ ++G +DI+ NNA  +     N
Sbjct: 90  YTAAEEIEAVGGKALP---CIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT--N 144

Query: 111 ILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH--AYT 168
            LD      + +++VN  G +L +K     +K +    I++ +    +         AYT
Sbjct: 145 TLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYT 204

Query: 169 SSKHGVVGLMKNTAVELGRFGIRVNCVSP-YAVSSPMAKGF 208
            +K+G+   +   A E     I VN + P  A+ +      
Sbjct: 205 IAKYGMSMYVLGMAEEFKG-EIAVNALWPKTAIHTAAMDML 244

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  153 bits (388), Expect = 3e-46
 Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 7/207 (3%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS 63
           +N+M  +L+GK AL+TG    IG+  A      GA VLI   +++      ++I +    
Sbjct: 1   SNAMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD 60

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           A     V  D+  E+  +      + +Y K+DI+ NN GI  E      D    ++ ++ 
Sbjct: 61  AI-LQPVVADLGTEQGCQ----DVIEKYPKVDILINNLGIF-EPVE-YFDIPDEDWFKLF 113

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
            VN++     T+   + M     G +I  AS   ++       Y+++K   + L ++ A 
Sbjct: 114 EVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAE 173

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLK 210
                 + VN + P +  +   +  L 
Sbjct: 174 LTTGTNVTVNTIMPGSTLTEGVETMLN 200

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  151 bits (383), Expect = 4e-46
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 20/198 (10%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           +     ++ GG G++G      F K+G  VL  D+  +               A+    V
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------------DQADSNILV 47

Query: 71  HCDVTKEKDIENAVNTAVS--QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
             +    +  ++ +    S  Q  ++D +F  AG           +     + ++  ++ 
Sbjct: 48  DGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVW 106

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            + +  K A   +KP G   +  T +   +    +   Y  +K  V  L  + A +    
Sbjct: 107 SSAIAAKLATTHLKPGGL--LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGL 164

Query: 189 --GIRVNCVSPYAVSSPM 204
                V  + P  + +PM
Sbjct: 165 PDNSAVLTIMPVTLDTPM 182

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  151 bits (385), Expect = 6e-46
 Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 18/207 (8%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSAN 65
           MS     + ALIT G   +G+         G  V +    D    E++ E          
Sbjct: 1   MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQ 60

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-DN-----DQAEF 119
               V  DVTK++D+   V  A+S +GK+D + NNAG      P +         ++ E+
Sbjct: 61  F---VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG------PYVFERKKLVDYEEDEW 111

Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSII--STASVCGVIGGVTSHAYTSSKHGVVGL 177
             ++  NL   F   K    VM+    G II           G +   A+ ++K G+V L
Sbjct: 112 NEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSL 171

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPM 204
            K  A E   +GI  N V P  +   M
Sbjct: 172 TKTVAYEEAEYGITANMVCPGDIIGEM 198

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  151 bits (383), Expect = 1e-45
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 10/204 (4%)

Query: 2   LQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSS 60
           L   SM      KVA++TG +  IG   A   +  G  V+I         E V   I ++
Sbjct: 18  LYFQSMM--ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA 75

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A        DV+    +     TA   +G +D++ NNAGI+      I +   A F+
Sbjct: 76  GGKALT---AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTT--IAETGDAVFD 130

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R+++VNL G F   + AA+ ++  GR  II+ ++    +   +   Y ++K GV  +   
Sbjct: 131 RVIAVNLKGTFNTLREAAQRLRVGGR--IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHV 188

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            + EL    I VN V+P   ++ +
Sbjct: 189 LSKELRGRDITVNAVAPGPTATDL 212

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  151 bits (384), Expect = 1e-45
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 9/202 (4%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSS 63
              S  L+GKVAL+TG    IG   A    + G KV++      +  E V   I  + S 
Sbjct: 21  GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSD 80

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERIL 123
           A     V  +V   +DI      AV  +GKLDI+ +N+G+V      + D    EF+R+ 
Sbjct: 81  AAC---VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH--VKDVTPEEFDRVF 135

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKNTA 182
           ++N  G F   + A + ++  GR  +I   S+ G    V  HA Y+ SK  +    +  A
Sbjct: 136 TINTRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMA 193

Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
           +++    I VN V+P  + + M
Sbjct: 194 IDMADKKITVNVVAPGGIKTDM 215

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  151 bits (384), Expect = 1e-45
 Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 25/224 (11%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSS 63
            +     +   A+ITGGA  IG   A    + G +V++     +   + +  ++++    
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA---- 58

Query: 64  ANGCS--YVHCDVTKEKDI----ENAVNTAVSQYGKLDIMFNNAGI---------VDEAK 108
           A   S      D++    +    E+ ++ +   +G+ D++ NNA            D   
Sbjct: 59  ARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNG 118

Query: 109 PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-----RGSIISTASVCGVIGGVT 163
                   A+   +   N V      +  AR     G       S+++       +    
Sbjct: 119 AADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPG 178

Query: 164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG 207
              YT +KH + GL +  A+EL    IRVN V+P     P A  
Sbjct: 179 FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP 222

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  151 bits (383), Expect = 2e-45
 Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 9/204 (4%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSS 61
           Q+   S  L GK A +TGG+  IG   A+  +  GA V +  +   +  ++V  +I  + 
Sbjct: 21  QSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG 80

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
             A     +  D    + IE A+   V   G LDI+ N+AGI   A   + +   A+F+ 
Sbjct: 81  GRAVA---IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFDE 135

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTAS-VCGVIGGVTSHAYTSSKHGVVGLMKN 180
           +++VN    F+  + A+R +   GR  II+  S +  ++       Y++SK  + GL K 
Sbjct: 136 VMAVNFRAPFVAIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASKAALAGLTKG 193

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +LG  GI VN V P +  + M
Sbjct: 194 LARDLGPRGITVNIVHPGSTDTDM 217

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  150 bits (380), Expect = 4e-45
 Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 9/204 (4%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSS 61
               +  RL GKVAL+TG    IG   A    + GAKV++         E V  +I +  
Sbjct: 8   SETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG 67

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
           S A     +  D+ +  +I    + AV+ +G LDI  +N+G+V      + D  + EF+R
Sbjct: 68  SDAIA---IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH--LKDVTEEEFDR 122

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA-YTSSKHGVVGLMKN 180
           + S+N  G F   + A R +   GR  I+ T+S       V  H+ Y+ SK  V   ++ 
Sbjct: 123 VFSLNTRGQFFVAREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRI 180

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            + + G   I VN V+P    + M
Sbjct: 181 FSKDCGDKKITVNAVAPGGTVTDM 204

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  149 bits (379), Expect = 7e-45
 Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 18/217 (8%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
              SM   L  +VA++TG +  IG   A   ++ GA V+     +   E +      +  
Sbjct: 18  GPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL 77

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQA 117
              G      +V     ++  V + + ++G L+++ NNAGI         D         
Sbjct: 78  EGRG---AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQ-------DQLAMRMKDD 127

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           E++ ++  NL   F  ++   R M  A  G I++  SV G  G      Y ++K GV G+
Sbjct: 128 EWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGM 187

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            +  A E+G  GI VNCV+P  + + M K    L  +
Sbjct: 188 TRALAREIGSRGITVNCVAPGFIDTDMTK---GLPQE 221

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  148 bits (375), Expect = 1e-44
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 19/211 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCS 68
           +L+GK A++TG +  +G+  A      GA +++         ++  E+  ++  +     
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVV-- 59

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERIL 123
               DV   +D+EN V TA+  +G++DI+ NNAGI         D       + +++ +L
Sbjct: 60  -AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITR-------DTLMLKMSEKDWDDVL 111

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
           + NL  A+L TK  +++M     G II+  S+ G+IG      Y +SK G++G  K+ A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           E    GI  N V+P  + + M      L D 
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMTD---VLPDK 199

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  149 bits (378), Expect = 1e-44
 Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
            + KVAL+TG    IG   A++ +K  + V+         +SV ++I S    ++G    
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSG---Y 98

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSV 125
             DV+K+++I   +N  ++++  +DI+ NNAGI         DN        E+E +L  
Sbjct: 99  AGDVSKKEEISEVINKILTEHKNVDILVNNAGITR-------DNLFLRMKNDEWEDVLRT 151

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL   F  T+  ++ M     G II+ +S+ G+ G V    Y+SSK GV+G  K+ A EL
Sbjct: 152 NLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKEL 211

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
               I VN ++P  +SS M     K+ + 
Sbjct: 212 ASRNITVNAIAPGFISSDMTD---KISEQ 237

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  149 bits (377), Expect = 4e-44
 Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG---------ESVCEDISSS 60
           R  G+V L+TG  G +G   A  F++ GA V++ D+  D           + V E+I   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-DQAEF 119
              A      +  V      E  V TA+  +G++D++ NNAGI+   +          ++
Sbjct: 66  GGKAVAN---YDSVE---AGEKLVKTALDTFGRIDVVVNNAGIL---RDRSFSRISDEDW 116

Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
           + I  V+L G+F  T+ A   MK    G II TAS  G+ G      Y+++K G++GL  
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176

Query: 180 NTAVELGRFGIRVNCVSPYAVS 201
              +E  +  I  N ++P A S
Sbjct: 177 TLVIEGRKNNIHCNTIAPNAGS 198

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  146 bits (370), Expect = 7e-44
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 18/209 (8%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L  KVAL+TG +  IG   A   +  GA V+         E     +      A G   +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARG---L 59

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSV 125
             +++  + I+N      ++   +DI+ NNAGI         DN      + E++ +++ 
Sbjct: 60  VLNISDIESIQNFFAEIKAENLAIDILVNNAGIT-------RDNLMMRMSEDEWQSVINT 112

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL   F  +K   R M     G IIS  SV G  G      Y ++K GV+G  K+ A E+
Sbjct: 113 NLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEV 172

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
               I VN V+P  +++ M     KL D+
Sbjct: 173 ASRNITVNVVAPGFIATDMTD---KLTDE 198

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  147 bits (373), Expect = 1e-43
 Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 27/221 (12%)

Query: 2   LQANSMSP----RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG------- 50
           L+A +  P     + G+V ++TG  G IG   A  F+  GA+V++ DI   L        
Sbjct: 12  LEAQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGG 71

Query: 51  ---ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEA 107
              +SV ++I+++   A        +V         + TAV  +G LD++ NNAGIV   
Sbjct: 72  SAAQSVVDEITAAGGEAVAD---GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV--- 125

Query: 108 KPNILDN-DQAEFERILSVNLVGAFLGTKHAARVMKPAGR------GSIISTASVCGVIG 160
           +  ++ N  + EF+ +++V+L G F   +HAA   +   +      G II+T+S  G+ G
Sbjct: 126 RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG 185

Query: 161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS 201
            V    Y+++K G+  L    A E+GR+G+ VN ++P A +
Sbjct: 186 SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSART 226

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  145 bits (367), Expect = 3e-43
 Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 17/209 (8%)

Query: 3   QANSMSP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSS 60
           + + M+   L  ++AL+TG +  IG   A   +  GAKV +         + V   I+++
Sbjct: 17  RGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA 76

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----D 115
              A     V  DV++E ++E      + ++G+LD++ NNAGI         D       
Sbjct: 77  GGEAFA---VKADVSQESEVEALFAAVIERWGRLDVLVNNAGITR-------DTLLLRMK 126

Query: 116 QAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVV 175
           + +++ +L +NL G FL ++ AA++M     G II+ ASV G +G      Y+++K GV+
Sbjct: 127 RDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVI 186

Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPM 204
           GL K  A EL   GI VN V+P  +++ M
Sbjct: 187 GLTKTVAKELASRGITVNAVAPGFIATDM 215

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  144 bits (365), Expect = 4e-43
 Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 19/210 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSY 69
           L+GKVAL+TG +  IG   A   +K GA V++     +     V ++I    S A     
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA--- 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILS 124
           V  DV   +D+ N V   V  +G++DI+ NNAG+         DN      + E++ +++
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTK-------DNLLMRMKEEEWDTVIN 111

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            NL G FL TK  +R M     G I++ ASV GV G      Y ++K GV+GL K +A E
Sbjct: 112 TNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKE 171

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           L    I VN ++P  +++ M      LD++
Sbjct: 172 LASRNITVNAIAPGFIATDMTD---VLDEN 198

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  143 bits (364), Expect = 6e-43
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 17/213 (7%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M  +LQGKV+L+TG    IG   A   +  G+ V+I     +  ++V E+I++       
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVK-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFER 121
              V  ++  E+ I  A     +    +DI+ NNAGI         D         ++E 
Sbjct: 59  AHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITR-------DKLFLRMSLLDWEE 111

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +L VNL G FL T+++ R M     G I++ +SV G  G V    Y+++K G++G  K+ 
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSL 171

Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           A EL    + VN V+P  + + M      L ++
Sbjct: 172 AKELAPRNVLVNAVAPGFIETDMTA---VLSEE 201

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  143 bits (364), Expect = 6e-43
 Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 19/210 (9%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSY 69
              K AL+TG +  IG   A   ++ G  V +      +  E+V E+I +    +     
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA--- 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILS 124
           +  +V    +++  +   VSQ+G LD++ NNAGI         DN      + E++ ++ 
Sbjct: 59  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITR-------DNLLMRMKEQEWDDVID 111

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            NL G F   + A   M     G+II+ +SV G +G      Y ++K GV+GL K+ A E
Sbjct: 112 TNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARE 171

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
           L   GI VN V+P  + S M      L D+
Sbjct: 172 LASRGITVNAVAPGFIVSDMTD---ALSDE 198

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  143 bits (363), Expect = 9e-43
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 6/205 (2%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   +QGK+A++T G+  +G  +A   +++GA++L+     +  E+    I+S  S A  
Sbjct: 1   MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ- 59

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERILSV 125
              V  D+ +  DI+          G  DI+  + G     +P   ++    +++    +
Sbjct: 60  VDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGG---PRPGRFMELGVEDWDESYRL 115

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
               A    + AA  M   G G ++   SV  +            +  V+G+++  A+EL
Sbjct: 116 LARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLK 210
              G+ VN V P  + +   +   +
Sbjct: 176 APHGVTVNAVLPSLILTDRVRSLAE 200

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  150 bits (380), Expect = 1e-42
 Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 19/202 (9%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG---------ESVCEDISSS 60
           R  G+VA++TG    +G   A LF++ GAKV++ D+              + V ++I  +
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV-DEAKPNILDNDQAEF 119
              A      +  V    D    + TA+  +G++DI+ NNAGI+ D +        + ++
Sbjct: 76  GGEAVA---DYNSVI---DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKT---SEQDW 126

Query: 120 ERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
             +  V+L G+F  T+ A   MK    G II T+S  G+ G      YT++K G++GL  
Sbjct: 127 NLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN 186

Query: 180 NTAVELGRFGIRVNCVSPYAVS 201
             A+E  R  +  N + P A S
Sbjct: 187 TVAIEGARNNVLCNVIVPTAAS 208

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  143 bits (363), Expect = 1e-42
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 21/209 (10%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L G+ AL+TG  G IGE  AR F   GA V +   ++D  + +  D+             
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD------VFVF 78

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSV 125
             +++  K I+     A  +   +DI+ NNAGI         D         +++ +L+V
Sbjct: 79  SANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT-------RDGLFVRMQDQDWDDVLAV 131

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL  A   T+     M     G II+  S+ GV+G      Y ++K G++G  K  A E+
Sbjct: 132 NLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEI 191

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
               I VNC++P  + S M     KL++ 
Sbjct: 192 ASRNITVNCIAPGFIKSAMTD---KLNEK 217

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  142 bits (360), Expect = 2e-42
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 29/217 (13%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
                 P    +  L+TGG   IG   A+  +  G KV +                  S 
Sbjct: 5   ATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH--------------RGSG 50

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQA 117
           +  G   V  DVT    ++ A        G ++++ +NAG+         D       + 
Sbjct: 51  APKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-------DAFLMRMTEE 103

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
           +FE++++ NL GAF   + A+R M+    G +I   SV G+ G      Y +SK GV+G+
Sbjct: 104 KFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGM 163

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            ++ A EL +  +  N V+P  + + M +    LD+ 
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDMTR---ALDER 197

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  142 bits (360), Expect = 3e-42
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 21/209 (10%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+GKVAL+TG +  IG+  A L ++ GAKV+     +   +++ + +  +         +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN------GKGM 60

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSV 125
             +VT  + IE  +     ++G +DI+ NNAGI         DN      + E+  I+  
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT-------RDNLLMRMKEEEWSDIMET 113

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL   F  +K   R M    +G II+  SV G +G      Y ++K GV+G  K+ A E+
Sbjct: 114 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 173

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
              G+ VN V+P  + + M K    L+D+
Sbjct: 174 ASRGVTVNTVAPGFIETDMTK---ALNDE 199

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  141 bits (357), Expect = 8e-42
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 30/218 (13%)

Query: 3   QANSMSPR-LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS 61
            ++ + PR    +  L+TGG   IG   AR F+  G KV I                 S 
Sbjct: 10  HSSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAIT--------------YRSG 55

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQ 116
               G   V CD+T  + +E A       +G ++++  NAG+         D       +
Sbjct: 56  EPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTK-------DQLLMRMSE 108

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
            +F  ++  NL G F   K A R M  A +G ++  +SV G++G      Y +SK G+VG
Sbjct: 109 EDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVG 168

Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             ++ A ELG   I  N V+P  V + M K    L D+
Sbjct: 169 FARSLARELGSRNITFNVVAPGFVDTDMTK---VLTDE 203

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  140 bits (356), Expect = 9e-42
 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 19/207 (9%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHC 72
            V ++TG +  IG+  A    K G KVL+   +     E V + I +    A        
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAIT---FGG 58

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSVNL 127
           DV+KE D+E  + TA+  +G +D++ NNAGI         D       +++++ ++ +NL
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITR-------DTLLIRMKKSQWDEVIDLNL 111

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            G FL T+ A ++M    +G II+ ASV G+IG +    Y ++K GV+G  K  A E   
Sbjct: 112 TGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGAS 171

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDDD 214
             I VN V P  ++S M     KL +D
Sbjct: 172 RNINVNVVCPGFIASDMTA---KLGED 195

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  139 bits (354), Expect = 2e-41
 Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 19/220 (8%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISS 59
           M   +     +  ++A +TGG G IG    +   K G +V+              ED  +
Sbjct: 1   MAHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA 60

Query: 60  SSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN----- 114
                        +V      + A +   ++ G++D++ NNAGI         D      
Sbjct: 61  LGFDFYA---SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITR-------DVVFRKM 110

Query: 115 DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV 174
            + +++ ++  NL   F  TK     M   G G II+ +SV G  G      Y+++K G+
Sbjct: 111 TREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI 170

Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            G   + A E+   G+ VN VSP  + + M K    +  D
Sbjct: 171 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK---AIRPD 207

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  138 bits (349), Expect = 1e-40
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 40/216 (18%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
            + +I+G A  IG    ++    G +++  DI+D                      V  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41

Query: 74  VTKEKDIENAVNTAVSQ-YGKLDIMFNNAGIVDEAKP--NILDND--------------- 115
           ++  +  + A+   +++    +D +   AG+  + K   N++  +               
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPAL 101

Query: 116 -QAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHG 173
            +      + ++ V +         +      G      ++    G    + AY  SK+ 
Sbjct: 102 KKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNA 161

Query: 174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
           +   ++  A   G  G+R+N ++P A  +P+ +  L
Sbjct: 162 LTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  137 bits (348), Expect = 2e-40
 Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 13/217 (5%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSK---HGAKVLIADIKDDLGESVCEDISSSSSSA 64
           +  L   V ++TG +   G   A   ++    G+ +L++   + +   + E++ +     
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYG----KLDIMFNNAGIV-DEAKPNILDNDQAEF 119
                   D+  E  ++  ++           +  ++ NNA  + D +K  +  ND AE 
Sbjct: 61  K-VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV 119

Query: 120 ERILSVNLVGAFLGTKHAARVMK--PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
               ++NL      T       +  P    ++++ +S+C +        Y + K     L
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDML 179

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            +  A E     +RV   +P  + + M +   +   D
Sbjct: 180 YQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKD 214

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  138 bits (349), Expect = 2e-40
 Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 16/208 (7%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSS 61
           Q          +VA +TGG G +G   +R     G  V ++   ++D   +       + 
Sbjct: 15  QTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG 74

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQ 116
                      DV   +  E      ++ +GK+D++ NNAGI         D       +
Sbjct: 75  RDFKA---YAVDVADFESCERCAEKVLADFGKVDVLINNAGITR-------DATFMKMTK 124

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
            +++ ++  +L   F  TK     M     G I++  SV G  G      Y S+K G+ G
Sbjct: 125 GDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHG 184

Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSSPM 204
             K  A+E  + GI VN VSP  +++ M
Sbjct: 185 FTKTLALETAKRGITVNTVSPGYLATAM 212

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  138 bits (350), Expect = 2e-40
 Identities = 45/227 (19%), Positives = 75/227 (33%), Gaps = 35/227 (15%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-------------ADIKDDLGE 51
           + M+      VAL+TG A  +G   A      G  V +             A +      
Sbjct: 2   SHMT-APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN 60

Query: 52  S---VCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--- 105
           S   V  D+S+ +++    +     VT        V    + +G+ D++ NNA       
Sbjct: 61  SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP 120

Query: 106 ---------EAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP------AGRGSII 150
                    E      +  +     +   N +  +   K  A  +            SII
Sbjct: 121 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSII 180

Query: 151 STASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSP 197
           +          +    YT +K  + GL ++ A+EL    IRVN V P
Sbjct: 181 NMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 227

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  136 bits (346), Expect = 3e-40
 Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 18/207 (8%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHC 72
           + ALITG +  IG   A   ++ G  + I      +  E V E+     S     + +  
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPL--VAVLGA 59

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSVNL 127
           ++ + +     V+ A    G LD + NNAGI         D         ++E +L  NL
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGITR-------DTLLVRMKDEDWEAVLEANL 112

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
              F  T+ A ++M  A  G I++  SV G++G      Y +SK G++G  +  A E  +
Sbjct: 113 SAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQ 172

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            GI VN V+P  + + M +   +L  +
Sbjct: 173 RGITVNAVAPGFIETEMTE---RLPQE 196

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  136 bits (345), Expect = 4e-40
 Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 25/209 (11%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK +LITG +  IG   ARL  K G+KV+I+   ++  +S+   +       +  +  
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL------KDNYTIE 65

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN-----DQAEFERILSV 125
            C++  +++  N ++    +   LDI+  NAGI         D         +F++++ +
Sbjct: 66  VCNLANKEECSNLIS----KTSNLDILVCNAGIT-------SDTLAIRMKDQDFDKVIDI 114

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           NL   F+  + A + M     G II+ +S+ G+ G      Y +SK G++G+ K+ + E+
Sbjct: 115 NLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEV 174

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
              GI VN V+P  + S M     KL++ 
Sbjct: 175 ATRGITVNAVAPGFIKSDMTD---KLNEK 200

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  138 bits (350), Expect = 4e-40
 Identities = 45/229 (19%), Positives = 76/229 (33%), Gaps = 35/229 (15%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-------------ADIKDDL 49
           + + M+      VAL+TG A  +G   A      G  V +             A +    
Sbjct: 37  RGSHMT-APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR 95

Query: 50  GES---VCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD- 105
             S   V  D+S+ +++    +     VT        V    + +G+ D++ NNA     
Sbjct: 96  PNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP 155

Query: 106 -----------EAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP------AGRGS 148
                      E      +  +     +   N +  +   K  A  +            S
Sbjct: 156 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 215

Query: 149 IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSP 197
           II+          +    YT +K  + GL ++ A+EL    IRVN V P
Sbjct: 216 IINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 264

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  135 bits (342), Expect = 2e-39
 Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 9/218 (4%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
            A     R + ++AL+TG +G IG   AR   + G KV+         E +  +  S+  
Sbjct: 22  MARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY 81

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
                    CD++ E+DI +  +   SQ+  +DI  NNAG+       +L    + ++ +
Sbjct: 82  PGT-LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDM 138

Query: 123 LSVNLVGAFLGTKHAARVMKP--AGRGSIISTASVCG--VIGGVTSHAYTSSKHGVVGLM 178
            +VN++   + T+ A + MK      G II+  S+ G  V+    +H Y+++K+ V  L 
Sbjct: 139 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALT 198

Query: 179 KNTAVELGRFG--IRVNCVSPYAVSSPMAKGFLKLDDD 214
           +    EL      IR  C+SP  V +  A      D +
Sbjct: 199 EGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPE 236

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  132 bits (335), Expect = 8e-39
 Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
           + KVA+ITG +  IGE  AR  ++ G  + +     D  E +  ++           Y H
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE--VFYHH 58

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            DV+K + +E      + ++G +D++  NAG+    +  + +  + EF  ++ VNL+G +
Sbjct: 59  LDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR--LEELSEEEFHEMIEVNLLGVW 116

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVI---GGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
              K     +K  G  ++++T+ V   +   GG     Y S+K     L++   +E    
Sbjct: 117 RTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGG----YVSTKWAARALVRTFQIE--NP 170

Query: 189 GIRVNCVSPYAVSSPMA 205
            +R   + P AV +   
Sbjct: 171 DVRFFELRPGAVDTYFG 187

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  131 bits (331), Expect = 5e-38
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 6/199 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   LQGKVALITG +  IGE  AR  +  GA V IA  + +   ++ ++++++ +    
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKV-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  DV   + ++ AV + V   G LDI+ NNAGI+      + D D  ++ R++  N
Sbjct: 59  -HVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP--VEDADTTDWTRMIDTN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L+G    T+ A   +    +G+++  +S+ G +    +  Y ++K GV    +    E+ 
Sbjct: 116 LLGLMYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT 174

Query: 187 RFGIRVNCVSPYAVSSPMA 205
             G+RV  + P    + + 
Sbjct: 175 ERGVRVVVIEPGTTDTELR 193

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  129 bits (327), Expect = 6e-38
 Identities = 38/194 (19%), Positives = 64/194 (32%), Gaps = 30/194 (15%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
               L+ G +G++G        K  A+V+ A                  S       V  
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITA---------------GRHSGD-----VTV 41

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+T    I+        Q GK+D + +  G    +   + +    +    +S  L G   
Sbjct: 42  DITNIDSIKKMYE----QVGKVDAIVSATGSATFSP--LTELTPEKNAVTISSKLGGQIN 95

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
                   +    +GS   T  +      V   +   +   V    K+ A+E+ R GIR+
Sbjct: 96  LVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRI 152

Query: 193 NCVSPYAVSSPMAK 206
           N VSP  +     K
Sbjct: 153 NTVSPNVLEESWDK 166

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  129 bits (327), Expect = 2e-37
 Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 14/204 (6%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANG 66
           +  L+GKVAL+TG +  IG   A+  +  GA V I      +  E    +I S+  SA  
Sbjct: 2   NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS 61

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQ------YGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              +  ++     +E   ++  ++        K DI+ NNAGI   A   I +  +  F+
Sbjct: 62  ---IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF--IEETTEQFFD 116

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R++SVN    F   + A   ++   R  II+ +S    I      AY+ +K  +  +   
Sbjct: 117 RMVSVNAKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFT 174

Query: 181 TAVELGRFGIRVNCVSPYAVSSPM 204
            A +LG  GI VN + P  V + M
Sbjct: 175 LAKQLGARGITVNAILPGFVKTDM 198

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  128 bits (324), Expect = 8e-37
 Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           M     M      K+ +ITG +  IGE  AR FS+ G  +L+   + +  +++       
Sbjct: 4   MTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP---- 59

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                       DVT +   + A+  A   YG  D + NNAG++   +  I   +  E++
Sbjct: 60  -----NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ--IDTQEANEWQ 112

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R+  VN++G   G +     MK    G+II+ +S+ G        AY  +K  V  + +N
Sbjct: 113 RMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN 172

Query: 181 TAVELGRFGIRVNCVSPYAVSS 202
              E+    +RV  ++P AV +
Sbjct: 173 VREEVAASNVRVMTIAPSAVKT 194

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  132 bits (333), Expect = 1e-36
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 11/189 (5%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GKVA++TG A  IG   A +F++ GA V+  D+          +     +   G + +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV------DGAAEDLKRVADKVGGTAL 264

Query: 71  HCDVTKEKDIENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDN-DQAEFERILSVNLV 128
             DVT +  ++         +G K+DI+ NNAGI    +  +L N D+  ++ +++VNL+
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI---TRDKLLANMDEKRWDAVIAVNLL 321

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                T+           G +I  +S+ G+ G      Y ++K G++GL +  A  L   
Sbjct: 322 APQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADK 381

Query: 189 GIRVNCVSP 197
           GI +N V+P
Sbjct: 382 GITINAVAP 390

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  128 bits (323), Expect = 2e-36
 Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 7/206 (3%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAK----VLIADIKDDLGESVCED 56
           M Q    + RL  K  LITG +  IG+  A  + +        +L A   + L E + + 
Sbjct: 21  MSQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKT 79

Query: 57  ISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ 116
           I     +A        D+T+ + I+  +     ++  +DI+ NNAG    +   +     
Sbjct: 80  IDQEFPNAK-VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR-VGQIAT 137

Query: 117 AEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVG 176
            + + +   N+      T+    + +    G I++  S+ G     T   Y +SK  V  
Sbjct: 138 EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGA 197

Query: 177 LMKNTAVELGRFGIRVNCVSPYAVSS 202
              +   EL    IRV  ++P  V +
Sbjct: 198 FTDSLRKELINTKIRVILIAPGLVET 223

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  127 bits (321), Expect = 2e-36
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 7/195 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           +  KV LITG +G IGE  AR     GAK+L+   +    E++  +I  +  +A      
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTA---LAQ 58

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DVT    +      AV  +G++D++ NNAG++  +   +      E+ER++ VN+ G 
Sbjct: 59  VLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP--LAAVKVDEWERMIDVNIKGV 116

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
             G      +M+    G II+  S+  +    T+  Y ++K  V  +      E     I
Sbjct: 117 LWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQEST--NI 174

Query: 191 RVNCVSPYAVSSPMA 205
           RV CV+P  V S +A
Sbjct: 175 RVTCVNPGVVESELA 189

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  121 bits (305), Expect = 4e-34
 Identities = 37/194 (19%), Positives = 74/194 (38%), Gaps = 22/194 (11%)

Query: 5   NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           + M   ++ K  L+   +  IG   A + S+ GA+V I    ++L +             
Sbjct: 11  HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVC---- 66

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN-ILDNDQAEFERIL 123
                         D+   ++    +  ++DI+  NAG     K     +    +F+  +
Sbjct: 67  --------------DLRKDLDLLFEKVKEVDILVLNAGG---PKAGFFDELTNEDFKEAI 109

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
               +      ++    MK  G G I++  S   +      +   S++  + G +K  + 
Sbjct: 110 DSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSF 169

Query: 184 ELGRFGIRVNCVSP 197
           E+  +GI VNCV+P
Sbjct: 170 EVAPYGITVNCVAP 183

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  119 bits (301), Expect = 5e-34
 Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 20/189 (10%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
            LITG  G +G   AR     G  +L++  +      +  ++        G   +  D+ 
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREV--------GARALPADLA 52

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
            E          + + G LD++ +  G    A   + +  +   E +L+ +L    L   
Sbjct: 53  DE----LEAKALLEEAGPLDLLVHAVGKAGRAS--VREAGRDLVEEMLAAHL----LTAA 102

Query: 136 HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
              +  +       +   +    +      AY ++K  +   ++    EL R G+ +  V
Sbjct: 103 FVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLV 162

Query: 196 SPYAVSSPM 204
              AV++ +
Sbjct: 163 RLPAVATGL 171

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  119 bits (300), Expect = 3e-33
 Identities = 42/209 (20%), Positives = 71/209 (33%), Gaps = 22/209 (10%)

Query: 3   QANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA--------DIKDDLGESVC 54
                          ITG     GE  AR F++ G  +++          +  +L     
Sbjct: 11  SGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT- 69

Query: 55  EDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDN 114
                          +  DV     +  AV+    ++  L  + NNAG+     P     
Sbjct: 70  -----------RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP-AQSC 117

Query: 115 DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHG 173
           D  +++ ++  N+ G    T+     +   G G+ I++  SV G      SH Y  +K  
Sbjct: 118 DLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAF 177

Query: 174 VVGLMKNTAVELGRFGIRVNCVSPYAVSS 202
           V     N   +L   G+RV  + P    S
Sbjct: 178 VEQFSLNLRCDLQGTGVRVTNLEPGLCES 206

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  114 bits (287), Expect = 1e-31
 Identities = 31/192 (16%), Positives = 71/192 (36%), Gaps = 14/192 (7%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            + +ITG +  +G   A+L+   G    L    +  L  +V   +S++        Y   
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLSNN------VGYRAR 54

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+   +++E               + ++AG        + + D  + + ++  NL  A  
Sbjct: 55  DLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGL--LQEQDPEQIQTLIENNLSSAIN 109

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
             +   +  K     +++   S            Y + K  V GL+++  +EL    +++
Sbjct: 110 VLRELVKRYK-DQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKI 168

Query: 193 NCVSPYAVSSPM 204
             V P  +++  
Sbjct: 169 IAVYPGGMATEF 180

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  114 bits (287), Expect = 2e-31
 Identities = 45/197 (22%), Positives = 75/197 (38%), Gaps = 27/197 (13%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIA--------DIKDDLGESVCEDISSSSSSANG 66
           + L+TG     GEC  R F + G KV+          ++KD+LG+++             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL------------- 48

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP--NILDNDQAEFERILS 124
                 DV     IE  + +  +++  +DI+ NNAG+   A            ++E ++ 
Sbjct: 49  -YIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGL---ALGMEPAHKASVEDWETMID 104

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            N  G    T+     M     G II+  S  G       + Y ++K  V     N   +
Sbjct: 105 TNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTD 164

Query: 185 LGRFGIRVNCVSPYAVS 201
           L    +RV  + P  V 
Sbjct: 165 LHGTAVRVTDIEPGLVG 181

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  110 bits (277), Expect = 2e-29
 Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 7/190 (3%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIA---DIKDDLGESVCEDISSSSSSANGCS 68
             K+ LITG +   G   A   +  G +V  A   DI      +V      +  +     
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRV-YASMRDIVGRNASNVEAIAGFARDNDVDLR 62

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            +  DV  +  ++ A++  + + G++D++ +NAG +             +F  +  +N++
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFG--PAEAFTPEQFAELYDINVL 120

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYTSSKHGVVGLMKNTAVELGR 187
                 + A   M+    G +I  +S     G       Y ++K  +  +    A EL R
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSR 180

Query: 188 FGIRVNCVSP 197
           +GI  + + P
Sbjct: 181 WGIETSIIVP 190

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  107 bits (269), Expect = 2e-28
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 20/196 (10%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-----DIKDDLGESVCEDISSSS 61
           MS     KV L+TG +   G   A      G  V I      +  DDL           +
Sbjct: 1   MSE--SAKVWLVTGASSGFGRAIAEAAVAAGDTV-IGTARRTEALDDL----------VA 47

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
           +  +    +  DVT  + I+      +++YG++D++ NNAG          +  + E   
Sbjct: 48  AYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERELRD 105

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           +  +++ G    T+     M+  G GS+++ +S  G +      AY+++K  +  L +  
Sbjct: 106 LFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGL 165

Query: 182 AVELGRFGIRVNCVSP 197
           A E+  FGI+V  V P
Sbjct: 166 ADEVAPFGIKVLIVEP 181

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  100 bits (252), Expect = 8e-26
 Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 9/196 (4%)

Query: 14  KVALITGGAGSIGECAARLFSK---HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
            V LITG +  IG   A   +       KV            + E   + +        +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNIL-DNDQAEFERILSVNLVG 129
             DV   K +  A        G++D++  NAG+        L    +     +L VN+VG
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGL---GLLGPLEALGEDAVASVLDVNVVG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
                +     MK  G G ++ T SV G++G   +  Y +SK  + GL ++ AV L  FG
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 177

Query: 190 IRVNCVSPYAVSSPMA 205
           + ++ +    V +   
Sbjct: 178 VHLSLIECGPVHTAFM 193

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 98.9 bits (246), Expect = 4e-25
 Identities = 47/273 (17%), Positives = 88/273 (32%), Gaps = 76/273 (27%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           +   + + A++TGG   IG    +  S +G  V++       G    E + +S+      
Sbjct: 7   NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN--V 64

Query: 68  SYVHCDVTKEKD-IENAVNTAVSQYGKLDIMFNNAGI----------------------- 103
            +   DVT     + +  +   + +GKLDI+ NNAG+                       
Sbjct: 65  VFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEE 124

Query: 104 -----VDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV 158
                       ++       E  L +N  G    T+    +++ +    I++ +S  G 
Sbjct: 125 LVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGS 184

Query: 159 IGGVTSH-------------------------------------------AYTSSKHGVV 175
           +  V++                                            AYT+SK  + 
Sbjct: 185 LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244

Query: 176 GLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF 208
              +  A ++     +VNCV P  V + M  G 
Sbjct: 245 AYTRVLANKIP--KFQVNCVCPGLVKTEMNYGI 275

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 93.6 bits (233), Expect = 2e-23
 Identities = 50/241 (20%), Positives = 80/241 (33%), Gaps = 57/241 (23%)

Query: 13  GKVALITGGAGSIG-ECAARLFSKHGAKVLIA--DIKDDLGESVCEDISSSSSSANGCSY 69
             VAL+TGG   IG      L       V++   D+    G++  + + +   S     +
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT--RGQAAVQQLQAEGLSP---RF 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+   + I    +    +YG LD++ NNAGI    K         + E  +  N  G
Sbjct: 59  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA--FKVADPTPFHIQAEVTMKTNFFG 116

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIG----------------------------- 160
                     ++KP GR  +++ +S+  V                               
Sbjct: 117 TRDVCTELLPLIKPQGR--VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174

Query: 161 ------------GVTSHAYTSSKHGVVGLMKNTAVELGRF----GIRVNCVSPYAVSSPM 204
                       G  S AY  +K GV  L +  A +L        I +N   P  V + M
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

Query: 205 A 205
           A
Sbjct: 235 A 235

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 91.3 bits (227), Expect = 1e-22
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 23/214 (10%)

Query: 3   QANSMSPRL-QGKVALITGGAGSIGECAARLFSKHGAKV--LIADIKDDLGESVCEDISS 59
            ++ + PR       LITG    +G    +           L    ++       +++  
Sbjct: 10  HSSGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN---REQAKELED 66

Query: 60  SSSSANGCSYVHCDVTKEKDIENAVNT--AVSQYGKLDIMFNNAGIVDEAKPNILDNDQA 117
            + + +    +  D+      +  V     V++   L+++FNNAGI  ++   I      
Sbjct: 67  LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSAR-ITAVRSQ 125

Query: 118 EFERILSVNLVGAFLGTKHAARVMKPA-----------GRGSIISTASVCGVIGGVTS-- 164
           E    L  N V   +  K    ++K A           GR +II+ +S+ G I G T   
Sbjct: 126 ELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGG 185

Query: 165 -HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSP 197
            +AY +SK  +    K+ +V+L    I    + P
Sbjct: 186 MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP 219

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 88.2 bits (219), Expect = 1e-21
 Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 37/215 (17%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS---- 62
           MSP       ++TG    IG    +   K      I         +   D+  ++     
Sbjct: 1   MSP----GSVVVTGANRGIGLGLVQQLVKDKNIRHII--------ATARDVEKATELKSI 48

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYG--KLDIMFNNAGIVDEAKPNILDNDQAEFE 120
             +    +   VT +K ++  V+      G   L ++ NNAG++        + ++A   
Sbjct: 49  KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS-YGTNTEPNRAVIA 107

Query: 121 RILSVNLVGAFLGTKHAARVMKPA-----------GRGSIISTASVCGVIGGVTSH---- 165
             L VN     L T+    ++K A            R ++I+ +S  G I   TS     
Sbjct: 108 EQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQF 167

Query: 166 ---AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSP 197
              AY  SK  +    +  AV+L    + V    P
Sbjct: 168 PVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP 202

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 18/147 (12%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           P    +  +ITG    +G   AR  ++ GA V++A      GE+    ++          
Sbjct: 12  PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ------VE 65

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
               D+    D+ + V          D++ NNAGI+  A P  L  D   FE  +  N +
Sbjct: 66  VRELDLQ---DLSS-VRRFADGVSGADVLINNAGIM--AVPYALTVD--GFESQIGTNHL 117

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASV 155
           G F  T      + P     +++ +S+
Sbjct: 118 GHFALTNL----LLPRLTDRVVTVSSM 140

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 66.4 bits (162), Expect = 2e-13
 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 21/174 (12%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
           +    ++GK A++  G G +G  +A L +  GA+V++   K D  ++  + +    +   
Sbjct: 112 AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV----NKRF 167

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
             +    +   +     AV  A         +F    I  E  P     +++  E +   
Sbjct: 168 KVNVTAAETADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNESSIEIVADY 220

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCGV--IGGVTSHAYTSSKHGVVGL 177
           N              +    +G         G   IGG+        +  +  L
Sbjct: 221 NAQPPL-----GIGGIDATDKGKEYGGKRAFGALGIGGL---KLKLHRACIAKL 266

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 31/212 (14%)

Query: 1   MLQANSMSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS 58
           +    +M   L+ K  +I G A   SI    A++  + GAK++    K+   + + E + 
Sbjct: 21  LYFQGAMVN-LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKEL-EKLL 78

Query: 59  SSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLD-----IMFNNAGIVDEAKPNILD 113
              +          DV  ++++ N         G +D     I F N    ++ +    +
Sbjct: 79  EQLNQ-PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANM---EDLRGRFSE 134

Query: 114 NDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSH 165
             +  F     ++   +     H A+ + P G GSI+   +  G    +      GV   
Sbjct: 135 TSREGFLLAQDIS-SYSLTIVAHEAKKLMPEG-GSIV-ATTYLGGEFAVQNYNVMGVAKA 191

Query: 166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSP 197
           +  ++       +K  A++LG   IRVN +S 
Sbjct: 192 SLEAN-------VKYLALDLGPDNIRVNAISA 216

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 30/206 (14%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           M+  L+G+  ++ G A   SI    AR   + GA+++     + L +SV  +++ +    
Sbjct: 1   MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDR- 58

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERI 122
           N    + CDVT + +IE    +   Q G +  + +     +  E     L+ ++  F   
Sbjct: 59  NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLA 118

Query: 123 LSVN---LVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSK 171
            +++   L       K A  +M     GSI+ T +  G   V+      GV   +  +S 
Sbjct: 119 HNISSYSLTAV---VKAARPMMTE--GGSIV-TLTYLGGELVMPNYNVMGVAKASLDAS- 171

Query: 172 HGVVGLMKNTAVELGRFGIRVNCVSP 197
                 +K  A +LG+  IRVN +S 
Sbjct: 172 ------VKYLAADLGKENIRVNSISA 191

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 41/203 (20%), Positives = 77/203 (37%), Gaps = 26/203 (12%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           ++  L GK AL+ G     S+G   A    + GA+V ++   + L     +     + + 
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK----LAEAL 57

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERI 122
            G      DVT++++++         +G LD + +          +   +D  + ++   
Sbjct: 58  GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT- 181
           L V+   + +     A  +   G G I+ T +       V    Y      V+ + K   
Sbjct: 118 LEVS-AYSLVAVARRAEPLLREG-GGIV-TLTYYASEKVVPK--Y-----NVMAIAKAAL 167

Query: 182 -------AVELGRFGIRVNCVSP 197
                  A ELG  G+RVN +S 
Sbjct: 168 EASVRYLAYELGPKGVRVNAISA 190

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 37/205 (18%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           L+GK ALITG A   SI    A+ F + GA++        L + V  +I+    S     
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRV-REIAKGFGSD---L 74

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLD-----IMFNNAGIVDEAKPNILDNDQAEFERIL 123
            V CDV+ ++DI+N        +G LD     I +      +E K  ++D  +  F+  +
Sbjct: 75  VVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPK---EEFKGGVIDTSREGFKIAM 131

Query: 124 SVN---LVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSKH 172
            ++   L+     T+    +M+    G+I+ T S  G   V+      G+   A  S+  
Sbjct: 132 DISVYSLIAL---TRELLPLMEGRN-GAIV-TLSYYGAEKVVPHYNVMGIAKAALEST-- 184

Query: 173 GVVGLMKNTAVELGRFGIRVNCVSP 197
                ++  A ++ + G R+N +S 
Sbjct: 185 -----VRYLAYDIAKHGHRINAISA 204

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 50.3 bits (121), Expect = 8e-08
 Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 26/205 (12%)

Query: 5   NSMSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS 62
            + S  LQGK  LI G A   SI    A+   + GA++      D L + V E ++    
Sbjct: 23  TAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELG 81

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFE 120
           +       HCDV     I+    T   ++GKLD + +  G  D  E     +D  +A F 
Sbjct: 82  AF---VAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFT 138

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSKH 172
             + ++ V +       A  +   G GSI+ T +  G   V+      GV   A  +S  
Sbjct: 139 NTMLIS-VYSLTAVSRRAEKLMADG-GSIL-TLTYYGAEKVMPNYNVMGVAKAALEAS-- 193

Query: 173 GVVGLMKNTAVELGRFGIRVNCVSP 197
                +K  AV+LG   IRVN +S 
Sbjct: 194 -----VKYLAVDLGPQNIRVNAISA 213

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 46/204 (22%), Positives = 78/204 (38%), Gaps = 35/204 (17%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           L GK  LITG     SI    A+   + GA+ L         + V +      +  N  +
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAE-LAFTYVGQFKDRVEK----LCAEFNPAA 78

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLD-----IMFNNAGIVDEAKPNILDNDQAE-FERI 122
            + CDV  +++I++        +  LD     I F      D+ + N +D    E F   
Sbjct: 79  VLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPR---DQLEGNFIDCVTREGFSIA 135

Query: 123 LSVNLVGAFLG-TKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSKHG 173
             ++   +F    K    +MK     S++   +  G    +      GV   +  ++   
Sbjct: 136 HDIS-AYSFAALAKEGRSMMKNRN-ASMV-ALTYIGAEKAMPSYNTMGVAKASLEAT--- 189

Query: 174 VVGLMKNTAVELGRFGIRVNCVSP 197
               ++ TA+ LG  GI+VN VS 
Sbjct: 190 ----VRYTALALGEDGIKVNAVSA 209

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 27/200 (13%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           L GK  L+TG     SI    A+   + GA++    + D   + +  + ++   S     
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAEFGSEL--- 67

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAE-FERILSV 125
              CDV  +  I+    +  + +  LD + ++ G         + LD    E F     +
Sbjct: 68  VFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDI 127

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSKHGVVGL 177
           +   +F     AA  M      S++ T S  G    I      G+   A  +S       
Sbjct: 128 S-AYSFPALAKAALPMLSDD-ASLL-TLSYLGAERAIPNYNTMGLAKAALEAS------- 177

Query: 178 MKNTAVELGRFGIRVNCVSP 197
           ++  AV LG  G+RVN +S 
Sbjct: 178 VRYLAVSLGAKGVRVNAISA 197

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 32/202 (15%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           L+GK  LI G A   SI    A+     GA +    + + L + V   I+   +S     
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRV-RPIAQELNSPY--- 59

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLD-----IMFNNAGIVDEAKPNILDNDQAEFERIL 123
               DV+KE+  ++  N+     G LD     + F      +  + ++L+  ++ F   +
Sbjct: 60  VYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPK---EALEGSLLETSKSAFNTAM 116

Query: 124 SVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT-- 181
            ++ V + +   +  + +   G  S++ T S  G    +    Y      V+GL K    
Sbjct: 117 EIS-VYSLIELTNTLKPLLNNG-ASVL-TLSYLGSTKYMAH--Y-----NVMGLAKAALE 166

Query: 182 ------AVELGRFGIRVNCVSP 197
                 AV+LG+  IRVN +S 
Sbjct: 167 SAVRYLAVDLGKHHIRVNALSA 188

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 26/199 (13%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           ++GK  +I G A   S+    A+     GA+V +  + +   + V + ++ S        
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV-DPLAESLGVKL--- 83

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAEFERILSVN 126
            V CDV+  + ++N       ++G LD + +     D  E K   +D     F   + ++
Sbjct: 84  TVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHIS 143

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSKHGVVGLM 178
              +F      A  +   G GSI+ T S  G   V+      GV   A  +S       +
Sbjct: 144 -CYSFTYIASKAEPLMTNG-GSIL-TLSYYGAEKVVPHYNVMGVCKAALEAS-------V 193

Query: 179 KNTAVELGRFGIRVNCVSP 197
           K  AV+LG+  IRVN +S 
Sbjct: 194 KYLAVDLGKQQIRVNAISA 212

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 48.3 bits (116), Expect = 4e-07
 Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 27/200 (13%)

Query: 11  LQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           L GK  L+TG A   SI    A+   + GA++      D L   V E+ ++   S     
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSD---I 62

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVD--EAKPNILDNDQAE-FERILSV 125
            + CDV ++  I+         + K D   ++ G     +   + ++    E F+    +
Sbjct: 63  VLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDI 122

Query: 126 NLVGAFLGTKHAARVMKPAGRGSIISTASVCG---VIG-----GVTSHAYTSSKHGVVGL 177
           +   +F+    A R M   G  +++ T S  G    I      G+   +  ++       
Sbjct: 123 S-SYSFVAMAKACRSMLNPG-SALL-TLSYLGAERAIPNYNVMGLAKASLEAN------- 172

Query: 178 MKNTAVELGRFGIRVNCVSP 197
           ++  A  +G  G+RVN +S 
Sbjct: 173 VRYMANAMGPEGVRVNAISA 192

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 54/218 (24%)

Query: 7   MSPRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSS 63
           M+  L GK  L++G     SI    AR+  + GA++++       L + + + + + +  
Sbjct: 1   MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAP- 59

Query: 64  ANGCSYVHCDVTKEKDIENAVNTAVSQYG---KLD-----IMFNNAGIVDEAKPNILDND 115
                 +  DV  E+ + +         G   KLD     I F           N   + 
Sbjct: 60  -----LLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQ---TGMGINPFFDA 111

Query: 116 QAE-FERILSV---NLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK 171
                 + + +   +        K    +M P   GSI+          G+    +  S+
Sbjct: 112 PYADVSKGIHISAYSYASM---AKALLPIMNP--GGSIV----------GMD---FDPSR 153

Query: 172 ----HGVVGLMKNT--------AVELGRFGIRVNCVSP 197
               +  + + K+         A E G++G+R N V+ 
Sbjct: 154 AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA 191

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 38/149 (25%), Positives = 56/149 (37%), Gaps = 37/149 (24%)

Query: 17  LITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
           L+TG +G IG E    L  K+G K +IA            DI    +   G  ++  DV+
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIAS-----------DIVQRDTG--GIKFITLDVS 49

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVD---EAKPNILDNDQAEFERILSVNLVGAFL 132
              +I+ AV         +D +F+ AGI+    E  P  L            VN+     
Sbjct: 50  NRDEIDRAVEKY-----SIDAIFHLAGILSAKGEKDP-ALAYK---------VNM----N 90

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGG 161
           GT +     K      ++   S  GV G 
Sbjct: 91  GTYNILEAAKQHRVEKVV-IPSTIGVFGP 118

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 47/161 (29%)

Query: 10  RLQGKVALITG-GAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCE-------DISSS 60
             + K  LITG G GSIG E    L    GAKV++   +    + V +          + 
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQG-GAKVVVTTSR--FSKQVTDYYQSIYAKYGAK 529

Query: 61  SSS-----ANGCSYVHCDVTKEKDIENAVN------TAVSQYGKLDIMF------NNAGI 103
            S+      N  S         +D+E  +               LD +            
Sbjct: 530 GSTLIVVPFNQGSK--------QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIE 581

Query: 104 VDEAKPNILDNDQAEFE-RILSVN---LVGAFLGTKHAARV 140
           ++        + ++EF  RI+  N   ++G     K A  +
Sbjct: 582 LEHI------DSKSEFAHRIMLTNILRMMGCVKKQKSARGI 616

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 42/234 (17%), Positives = 74/234 (31%), Gaps = 51/234 (21%)

Query: 5   NSMSPRLQGKVALITGGAG--SIGECAARLFSKHGAKV--------LIADIKDDLGESVC 54
           ++    L+G+ A + G A     G   A+  +  GA+V        L    K      + 
Sbjct: 1   SAFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLD 60

Query: 55  EDISSSSSSANGCSYV-------------HCDVTKEK--------DIENAVNTAVSQYGK 93
           ED      S    + V               D+   K         I+          G 
Sbjct: 61  EDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGN 120

Query: 94  LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG-TKHAARVMKPAGRGSIIST 152
           +DI+ ++     E    +L+  +  +    S +   +F+   +H   +M     GS + T
Sbjct: 121 IDILVHSLANGPEVTKPLLETSRKGYLAASSNS-AYSFVSLLQHFGPIMNE--GGSAV-T 176

Query: 153 ASVCGVIGGVTSHAYTSSKHGVVGLMKNT--------AVELG-RFGIRVNCVSP 197
            S         +        G +   K          A E G ++G+RVN +S 
Sbjct: 177 LSYLA------AERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISA 224

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 43/155 (27%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M+ +   ++ L+TG AG +G       +     + +A            D+S    +   
Sbjct: 1   MAMK---RL-LVTGAAGQLGRVMRERLAPMAEILRLA------------DLSPLDPAGPN 44

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V CD+     +   V          D + +  GI  E            FE+IL  N
Sbjct: 45  EECVQCDLADANAVNAMVAGC-------DGIVHLGGISVE----------KPFEQILQGN 87

Query: 127 LVGAF--LGTKHAARVMKPAGRGSII--STASVCG 157
           ++G +       AAR     G+  I+  S+    G
Sbjct: 88  IIGLYNLY---EAARA---HGQPRIVFASSNHTIG 116

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 39/233 (16%), Positives = 75/233 (32%), Gaps = 53/233 (22%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLI---------------------A 43
           +   L+GK A I G A     G   A+  +  GA++L+                     +
Sbjct: 2   LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS 61

Query: 44  DIKDDLGESVCEDISSSSSSANGCSYVHCDV--------TKEKDIENAVNTAVSQYGKLD 95
            +  D      + +    +  +    V  DV        +    ++ A       +G +D
Sbjct: 62  RVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSID 121

Query: 96  IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG-TKHAARVMKPAGRGSIISTAS 154
           I+ ++     E    +L+  +  +   +S +   +F+    H   +M P   G+ I + +
Sbjct: 122 ILVHSLANGPEVSKPLLETSRKGYLAAISAS-SYSFVSLLSHFLPIMNP--GGASI-SLT 177

Query: 155 VCG---------VIGGVTSHAYTSSKHGVVGLMKNTAVELG-RFGIRVNCVSP 197
                               A  S         +  A E G +  IRVN +S 
Sbjct: 178 YIASERIIPGYGGGMSSAKAALESD-------TRVLAFEAGRKQNIRVNTISA 223

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 24/143 (16%), Positives = 44/143 (30%), Gaps = 35/143 (24%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           L+TG AG +G            +V               DI    ++      V CD+  
Sbjct: 6   LVTGAAGGVGSAIRPHLGTLAHEV------------RLSDIVDLGAAEAHEEIVACDLAD 53

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
            + + + V          D + +  G+  E            +  IL  N++    G  +
Sbjct: 54  AQAVHDLVKDC-------DGIIHLGGVSVE----------RPWNDILQANII----GAYN 92

Query: 137 AARVMKPAGRGSII--STASVCG 157
                +  G+  I+  S+    G
Sbjct: 93  LYEAARNLGKPRIVFASSNHTIG 115

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 31/118 (26%)

Query: 17  LITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHCDV 74
           LI G  G IG E   +L   +G + +IA            DI   ++   N   +   + 
Sbjct: 6   LIIGACGQIGTELTQKLRKLYGTENVIAS-----------DIRKLNTDVVNSGPFEVVNA 54

Query: 75  TKEKDIENAVNTAVSQYGKLDIMFNNAGIVD---EAKPNILDNDQAEFERILSVNLVG 129
                IE+ V        K+  ++  A ++    E  P     D         +N+  
Sbjct: 55  LDFNQIEHLVEV-----HKITDIYLMAALLSATAEKNP-AFAWD---------LNMNS 97

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 37/228 (16%), Positives = 75/228 (32%), Gaps = 55/228 (24%)

Query: 13  GKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESV----------------- 53
             +  I G       G   A+  SK   K++           +                 
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 54  ------------CEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNA 101
                           +++       +    ++ +   IE+  N    +YGK++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 102 GIVDEAKPNILDNDQAEFERILSV---NLVGAFLGTKHAARVMKPAGRGSIISTASVCGV 158
               E + ++L+  +  +   LS    +L+      K+   +MKP  + SII + +    
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISL---CKYFVNIMKP--QSSII-SLTYHA- 174

Query: 159 IGGVTSHAYTSSKHGVVGLMK-----NT---AVELGR-FGIRVNCVSP 197
                S        G +   K     +T   A  LGR + IR+N +S 
Sbjct: 175 -----SQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA 217

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 66/246 (26%)

Query: 7   MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLI---------------------- 42
           +   L+GK A + G A     G    +L    GA+VL+                      
Sbjct: 3   LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQD 62

Query: 43  ------------ADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK--------DIEN 82
                       A+  +   + V + I    +  +    V  +V+  K         I  
Sbjct: 63  SFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISE 122

Query: 83  AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG-TKHAARVM 141
                 +  G++DI+ ++     E    +L   +  +   +S +   +F+   +H   +M
Sbjct: 123 VAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS-SYSFVSLLQHFLPLM 181

Query: 142 KPAGRGSIISTASVCG---------VIGGVTSHAYTSSKHGVVGLMKNTAVELGR-FGIR 191
           K    GS +   S                    A  S         +  A E GR   +R
Sbjct: 182 KE--GGSAL-ALSYIASEKVIPGYGGGMSSAKAALESD-------CRTLAFEAGRARAVR 231

Query: 192 VNCVSP 197
           VNC+S 
Sbjct: 232 VNCISA 237

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.94
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.89
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.89
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.88
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.88
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.88
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.87
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.87
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.87
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.87
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.87
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.86
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.86
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.85
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.85
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.85
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.84
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.84
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.84
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.82
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.82
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.81
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.81
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.8
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.8
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.78
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.78
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.77
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.77
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.77
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.76
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.75
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.74
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.73
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.72
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.69
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.68
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.67
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.66
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.65
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.65
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.65
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.62
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.5
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.37
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.35
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.3
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.14
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.06
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.99
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.95
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.92
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.88
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.86
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.81
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.75
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.75
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.73
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.71
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.68
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.62
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.62
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.56
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.56
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.56
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.53
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.53
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.52
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.51
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.49
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.46
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.46
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.43
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.42
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.37
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.37
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.36
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.34
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.3
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.29
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.28
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.25
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.24
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.24
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.22
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.22
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.22
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	98.21
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.2
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.18
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.18
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.16
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.14
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.13
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.1
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.08
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.0
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.99
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.99
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.99
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.96
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.95
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.95
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.95
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.94
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.89
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.87
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.84
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.84
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.83
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.82
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.79
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.78
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.74
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.72
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.71
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.7
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.61
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.61
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.61
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.6
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.59
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.59
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.56
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.49
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.49
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.46
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.46
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.45
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.44
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.42
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.42
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.41
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.39
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.37
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.36
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.36
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.35
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.35
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.34
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.33
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.33
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.32
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.32
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.32
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.32
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.31
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.29
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.28
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.28
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.27
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.26
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.24
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.24
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.21
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.2
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.19
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.19
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.18
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.18
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.18
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.15
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.14
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.13
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.12
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.08
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.07
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.06
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.01
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.99
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.99
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.98
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.97
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.97
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.94
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.92
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.91
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.91
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.89
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.88
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.87
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.87
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.86
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.86
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.84
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.82
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.81
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.8
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.8
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.75
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.74
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.69
1lnq_A	336	MTHK channels, potassium channel related protein;	96.68
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.67
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.66
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.66
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.65
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.64
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.6
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.59
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.57
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.57
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.55
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.54
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.54
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.54
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.53
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.52
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.47
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.45
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.43
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.43
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.4
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.38
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.37
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.32
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.29
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.29
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.27
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.25
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.24
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.24
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	96.22
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.21
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.21
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.2
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.2
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.19

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.5e-53  Score=333.30  Aligned_cols=198  Identities=31%  Similarity=0.554  Sum_probs=185.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.....   ++.++++|++|+++++++++++.
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~---~~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK---EVLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999998876543   68899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++||++|+||||||...+. .++.+.+.++|++++++|+.|+|+++|+++|+|++++.|+||++||..+..+.|...+|+
T Consensus        80 ~~~G~iDiLVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~  158 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGV-TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYT  158 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTT-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHH
T ss_pred             HHcCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHH
Confidence            9999999999999986432 468899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|||......
T Consensus       159 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  200 (254)
T 4fn4_A          159 VAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSK  200 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSS
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccC
Confidence            999999999999999999999999999999999999766543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=7e-52  Score=325.29  Aligned_cols=195  Identities=29%  Similarity=0.414  Sum_probs=182.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.....   ++..++||++|+++++++++++.+
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY---DAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999988888876543   678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +||++|+||||||...+  .++.+.+.++|++++++|+.|+|+++|+++|+|.++ +.|+||++||..+..+.|...+|+
T Consensus        83 ~~G~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (255)
T 4g81_D           83 EGIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT  160 (255)
T ss_dssp             TTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHH
Confidence            99999999999998754  478999999999999999999999999999999654 679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|||.+...
T Consensus       161 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  201 (255)
T 4g81_D          161 AAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI  201 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc
Confidence            99999999999999999999999999999999999987654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=6.5e-51  Score=322.54  Aligned_cols=195  Identities=24%  Similarity=0.400  Sum_probs=173.4

Q ss_pred             CCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            6 SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         6 ~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      .|+.+++||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.      .++..+++|++|+++++++++
T Consensus        22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g------~~~~~~~~Dv~~~~~v~~~~~   95 (273)
T 4fgs_A           22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG------GGAVGIQADSANLAELDRLYE   95 (273)
T ss_dssp             ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTCEEEECCTTCHHHHHHHHH
T ss_pred             hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------CCeEEEEecCCCHHHHHHHHH
Confidence            57778999999999999999999999999999999999999988887777663      257889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.++||+||+||||||....  .++.+.+.++|++++++|+.|+|+++++++|+|++  .|+||++||..+..+.|...
T Consensus        96 ~~~~~~G~iDiLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~  171 (273)
T 4fgs_A           96 KVKAEAGRIDVLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFS  171 (273)
T ss_dssp             HHHHHHSCEEEEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCch
Confidence            999999999999999998654  47899999999999999999999999999999976  47899999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +|++||+|+.+|+|+++.|++++|||||+|+||+++||++.++..
T Consensus       172 ~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~  216 (273)
T 4fgs_A          172 VYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG  216 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc
Confidence            999999999999999999999999999999999999999877653

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=4.5e-50  Score=316.07  Aligned_cols=196  Identities=27%  Similarity=0.431  Sum_probs=174.0

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.++++||++|||||++|||+++|++|+++|++|++++|+.+..+.. +++....   .++.+++||++|++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~~---~~~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQRQ---PRATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHHC---TTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhcC---CCEEEEEeecCCHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998775443 3344333   2678999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.++||++|+||||||...+   ...+.+.++|++.+++|+.++|.++++++|+|+++ +|+||++||..+..+.|...+
T Consensus        77 ~~~~~G~iDiLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~  152 (258)
T 4gkb_A           77 TIATFGRLDGLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSG  152 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHH
T ss_pred             HHHHhCCCCEEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchH
Confidence            99999999999999998643   34578999999999999999999999999999765 599999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      |++||+|+.+|+|+++.|++++|||||+|+||+|+|||.+++..
T Consensus       153 Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  196 (258)
T 4gkb_A          153 YCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIA  196 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhh
Confidence            99999999999999999999999999999999999999877643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.4e-48  Score=303.89  Aligned_cols=186  Identities=26%  Similarity=0.374  Sum_probs=168.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|+||||||++|||+++|++|+++|++|++++|+++.++++.++.       .++.+++||++|+++++++++++.++||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~v~~~~~~~g   74 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-------PNLFYFHGDVADPLTLKKFVEYAMEKLQ   74 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-------TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------CCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            499999999999999999999999999999999877665544331       2578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|+||||||....  .++.+.+.++|++++++|+.|+|+++|.+.|+|+++ +|+||++||..+..+.|...+|++||+
T Consensus        75 ~iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKa  151 (247)
T 3ged_A           75 RIDVLVNNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKG  151 (247)
T ss_dssp             CCCEEEECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHH
Confidence            99999999998654  468999999999999999999999999999999876 499999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |+.+|+|+++.|+++ |||||+|+||+++|++..++.
T Consensus       152 al~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~  187 (247)
T 3ged_A          152 GIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT  187 (247)
T ss_dssp             HHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CC
T ss_pred             HHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH
Confidence            999999999999997 999999999999999977653

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.5e-48  Score=306.89  Aligned_cols=185  Identities=24%  Similarity=0.308  Sum_probs=169.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+..      +       .+..++++|++|+++++++++++.+
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~-------~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------L-------PEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------S-------CTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------C-------CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999975421      1       1245789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-CCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~y~  168 (214)
                      ++|++|+||||||.......++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.| +...|+
T Consensus        75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~  154 (261)
T 4h15_A           75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYA  154 (261)
T ss_dssp             HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHH
T ss_pred             HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHH
Confidence            9999999999999876555578899999999999999999999999999999999999999999999999887 578999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|+.+|+|+++.|++++|||||+|+||+++||+...
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh
Confidence            999999999999999999999999999999999998654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.1e-49  Score=306.12  Aligned_cols=188  Identities=27%  Similarity=0.445  Sum_probs=169.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+.+.....   ++..++||++|+++++++++    
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~---~~~~~~~Dv~d~~~v~~~~~----   76 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG---NASALLIDFADPLAAKDSFT----   76 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC---CEEEEECCTTSTTTTTTSST----
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC---cEEEEEccCCCHHHHHHHHH----
Confidence            689999999999999999999999999999999999764  445555555433   67899999999999887764    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                       +|++|+||||||...+  .++.+.+.++|++++++|+.|+|+++|+++|+|.+++ .|+||++||..+..+.+...+|+
T Consensus        77 -~g~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~  153 (247)
T 4hp8_A           77 -DAGFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYT  153 (247)
T ss_dssp             -TTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             -hCCCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHH
Confidence             5799999999998754  4688999999999999999999999999999998765 69999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|||.+.+.
T Consensus       154 asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~  194 (247)
T 4hp8_A          154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc
Confidence            99999999999999999999999999999999999987543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.1e-48  Score=302.45  Aligned_cols=182  Identities=30%  Similarity=0.460  Sum_probs=160.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++..         ..++..+++|++|+++++++++    +
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~----~   75 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR---------HPRIRREELDITDSQRLQRLFE----A   75 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC---------CTTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh---------cCCeEEEEecCCCHHHHHHHHH----h
Confidence            69999999999999999999999999999999999887654321         1367889999999999887764    6


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||+..    ++.+.+.++|++++++|+.|+|+++|+++|+|+++ .|+||++||..+..+.+...+|++|
T Consensus        76 ~g~iDiLVNNAGi~~----~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~as  150 (242)
T 4b79_A           76 LPRLDVLVNNAGISR----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSAS  150 (242)
T ss_dssp             CSCCSEEEECCCCCC----GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             cCCCCEEEECCCCCC----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHH
Confidence            899999999999863    35788999999999999999999999999999765 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      |+|+.+|+|+++.|++++|||||+|+||+++|||.+.+..
T Consensus       151 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~  190 (242)
T 4b79_A          151 KGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA  190 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC
Confidence            9999999999999999999999999999999999876543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4.4e-46  Score=294.07  Aligned_cols=197  Identities=19%  Similarity=0.246  Sum_probs=178.7

Q ss_pred             CccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ++++||++|||||+|  |||+++|+.|+++|++|++++|+++.++++.+.+.+..+  .++.++++|++|++++++++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ--PEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC--SSCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999865  999999999999999999999999988888888776543  3578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           87 AVSQYGKLDIMFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      +.+++|++|+||||||....  ....+.+.+.++|...+++|+.+++.+++.+.|++++  +|+||++||..+..+.|.+
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccc
Confidence            99999999999999998643  2234677889999999999999999999999998765  5899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+|++||+|+.+|+|+++.|++++|||||+|+||+++|++.+...
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc
Confidence            999999999999999999999999999999999999999987654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.6e-45  Score=289.09  Aligned_cols=197  Identities=20%  Similarity=0.288  Sum_probs=170.8

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |++++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....   .++.++++|++|++++++++++
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~   77 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARNEDEVTAFLNA   77 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999998888887653   2688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+. |++|+||||||...+  .++.+.+.++|++++++|+.|++.+++.++|+|++++.|+||++||..+..+.++...
T Consensus        78 ~~~~-g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (252)
T 3h7a_A           78 ADAH-APLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAA  154 (252)
T ss_dssp             HHHH-SCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHH
T ss_pred             HHhh-CCceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCcc
Confidence            9999 999999999998754  3577899999999999999999999999999999988899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEE-EEEeCCcccCccccccC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRV-NCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v-~~v~Pg~v~t~~~~~~~  209 (214)
                      |++||+|+++|+++++.|++++||+| |+|+||+++|++.+...
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~  198 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR  198 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc
Confidence            99999999999999999999999999 99999999999987653

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.8e-45  Score=288.70  Aligned_cols=196  Identities=33%  Similarity=0.493  Sum_probs=181.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|++++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~   82 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTDEQHREAVIKA   82 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999988888888776543   3688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+++|++|+||||||...+.  ++ +.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.+...+
T Consensus        83 ~~~~~g~id~lv~nAg~~~~~--~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  159 (256)
T 3gaf_A           83 ALDQFGKITVLVNNAGGGGPK--PF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMAS  159 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCCCCC--CC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchH
Confidence            999999999999999987543  45 889999999999999999999999999999988899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++||++++.|+++++.|++++||+||+|+||+++|++....
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  201 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV  201 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc
Confidence            999999999999999999999999999999999999987643

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=4.5e-45  Score=289.63  Aligned_cols=198  Identities=18%  Similarity=0.218  Sum_probs=182.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+. .++.++++|++|+++++++++++.
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG-ARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998888888877653221 247889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+...+|+
T Consensus        83 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATS  160 (265)
T ss_dssp             HHHCSCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhH
Confidence            999999999999998654  357889999999999999999999999999999998899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.....
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  201 (265)
T 3lf2_A          161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRF  201 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhh
Confidence            99999999999999999999999999999999999876543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=9.8e-45  Score=288.59  Aligned_cols=197  Identities=28%  Similarity=0.439  Sum_probs=179.4

Q ss_pred             cCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHH
Q 044923            4 ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus         4 ~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      +..|..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~   75 (271)
T 3tzq_B            2 PGSMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG------RGAVHHVVDLTNEVSVRAL   75 (271)
T ss_dssp             -----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC------TTCEEEECCTTCHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHH
Confidence            3457778999999999999999999999999999999999999988887776662      2578899999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      ++++.+++|++|+||||||...+....+.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+.
T Consensus        76 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  155 (271)
T 3tzq_B           76 IDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM  155 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999998754344577889999999999999999999999999999988999999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ...|++||++++.|+++++.|++++||+||+|+||+++|++..
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence            9999999999999999999999999999999999999999876

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.3e-45  Score=291.48  Aligned_cols=204  Identities=26%  Similarity=0.354  Sum_probs=182.8

Q ss_pred             cCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHH
Q 044923            4 ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus         4 ~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      +..|.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++........++.++++|++|+++++++
T Consensus         2 p~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~   81 (281)
T 3svt_A            2 PGSMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA   81 (281)
T ss_dssp             ------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred             CCCCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence            34577889999999999999999999999999999999999999888888888876544334688999999999999999


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      ++++.+++|++|+||||||..... .++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||..+..+.+.
T Consensus        82 ~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  160 (281)
T 3svt_A           82 VDAVTAWHGRLHGVVHCAGGSENI-GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW  160 (281)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC
Confidence            999999999999999999985332 3578889999999999999999999999999999988899999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..+|++||++++.|+++++.|++++||+||+|+||+++|++....
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  205 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI  205 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence            999999999999999999999999999999999999999997653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.1e-45  Score=287.05  Aligned_cols=199  Identities=26%  Similarity=0.365  Sum_probs=172.6

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |+.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++........++.++++|++|++++++++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            45678899999999999999999999999999999999999888888888766533223678999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+++|++|+||||||...+.  ++ +.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+....
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~--~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDG--SL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGI  157 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCC--CC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTH
T ss_pred             HHHhcCCCCEEEECCCcCCCC--CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcc
Confidence            999999999999999987543  34 778899999999999999999999999999888899999999999997777899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  199 (250)
T 3nyw_A          158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA  199 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc
Confidence            999999999999999999999999999999999999998754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-45  Score=288.35  Aligned_cols=199  Identities=23%  Similarity=0.345  Sum_probs=180.3

Q ss_pred             CCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         5 ~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      ..|...++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....   .++.++++|++|++++++++
T Consensus         3 ~~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~   79 (264)
T 3ucx_A            3 GSMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITDDAQVAHLV   79 (264)
T ss_dssp             ----CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHH
Confidence            346677999999999999999999999999999999999999988888888776543   36889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      +++.+++|++|+||||||..... .++.+.+.++|++++++|+.+++.+++.++|+|.+++ |+||++||..+..+.+.+
T Consensus        80 ~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~  157 (264)
T 3ucx_A           80 DETMKAYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKY  157 (264)
T ss_dssp             HHHHHHTSCCSEEEECCCSCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTC
T ss_pred             HHHHHHcCCCcEEEECCCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCcc
Confidence            99999999999999999986332 4678899999999999999999999999999998765 899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++.+.+
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  201 (264)
T 3ucx_A          158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSY  201 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHH
Confidence            99999999999999999999999999999999999999987654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=7.8e-45  Score=285.65  Aligned_cols=192  Identities=30%  Similarity=0.501  Sum_probs=178.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+.+..      .+.++++|++|+++++++++++.
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD------NGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc------cceEEEEeCCCHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999998888777766643      35788999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||...+  .++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||..+..+.++...|+
T Consensus        79 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (248)
T 3op4_A           79 DEFGGVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYA  156 (248)
T ss_dssp             HHHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHH
Confidence            999999999999998754  357888999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  196 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL  196 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc
Confidence            9999999999999999999999999999999999987653

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=5.3e-45  Score=289.97  Aligned_cols=197  Identities=27%  Similarity=0.459  Sum_probs=181.2

Q ss_pred             CCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            6 SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         6 ~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      .|..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.....   ++.++.+|++|+++++++++
T Consensus        21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~   97 (270)
T 3ftp_A           21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL---EGRGAVLNVNDATAVDALVE   97 (270)
T ss_dssp             --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC---CCEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEEeCCCHHHHHHHHH
Confidence            466779999999999999999999999999999999999999888888777765432   57889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.+++|++|+||||||.....  ++.+.+.++|++++++|+.|++.++++++|.|.+++.|+||++||..+..+.+++.
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  175 (270)
T 3ftp_A           98 STLKEFGALNVLVNNAGITQDQ--LAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQV  175 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBH
T ss_pred             HHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCch
Confidence            9999999999999999987543  57788999999999999999999999999999988889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  217 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG  217 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh
Confidence            999999999999999999999999999999999999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-44  Score=288.43  Aligned_cols=198  Identities=31%  Similarity=0.456  Sum_probs=175.0

Q ss_pred             CCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-------------CCcchhhHHHHhhccCCCCCCceEEE
Q 044923            5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-------------KDDLGESVCEDISSSSSSANGCSYVH   71 (214)
Q Consensus         5 ~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-------------~~~~~~~~~~~~~~~~~~~~~v~~~~   71 (214)
                      ..|..+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+....   .++.++.
T Consensus         3 ~~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   79 (277)
T 3tsc_A            3 GSMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAV   79 (277)
T ss_dssp             ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEE
T ss_pred             CccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEE
Confidence            45667899999999999999999999999999999999988             3444445545444432   3688999


Q ss_pred             eeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEE
Q 044923           72 CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSII  150 (214)
Q Consensus        72 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv  150 (214)
                      +|++|+++++++++++.+++|++|+||||||...+  .++.+.+.++|++++++|+.|++.++++++|+|.+++ .|+||
T Consensus        80 ~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv  157 (277)
T 3tsc_A           80 VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSII  157 (277)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            99999999999999999999999999999998754  3577889999999999999999999999999998875 68999


Q ss_pred             EecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          151 STASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       151 ~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||..+..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       158 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          158 LISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             EECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             EEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            999999999999999999999999999999999999999999999999999998653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.6e-44  Score=289.90  Aligned_cols=200  Identities=32%  Similarity=0.490  Sum_probs=177.3

Q ss_pred             cCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------CcchhhHHHHhhccCCCCCCceEEE
Q 044923            4 ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK------------DDLGESVCEDISSSSSSANGCSYVH   71 (214)
Q Consensus         4 ~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~   71 (214)
                      +..|..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++....   .++.+++
T Consensus        19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   95 (299)
T 3t7c_A           19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---RRIIASQ   95 (299)
T ss_dssp             ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEE
T ss_pred             CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC---CceEEEE
Confidence            3457778999999999999999999999999999999999987            344455555554432   3688999


Q ss_pred             eeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEE
Q 044923           72 CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSII  150 (214)
Q Consensus        72 ~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv  150 (214)
                      +|++|+++++++++++.+.+|++|+||||||...+. .++.+.+.++|++++++|+.|++.+++.++|+|.+++ .|+||
T Consensus        96 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv  174 (299)
T 3t7c_A           96 VDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIV  174 (299)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            999999999999999999999999999999987543 3478889999999999999999999999999987764 78999


Q ss_pred             EecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          151 STASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       151 ~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||..+..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++...
T Consensus       175 ~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          175 FTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             EECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc
Confidence            999999999999999999999999999999999999999999999999999998753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.6e-44  Score=289.35  Aligned_cols=198  Identities=33%  Similarity=0.508  Sum_probs=175.2

Q ss_pred             CCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC----------------CcchhhHHHHhhccCCCCCCce
Q 044923            5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK----------------DDLGESVCEDISSSSSSANGCS   68 (214)
Q Consensus         5 ~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~----------------~~~~~~~~~~~~~~~~~~~~v~   68 (214)
                      ..|..+++||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+.+....   .++.
T Consensus         3 ~~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~   79 (286)
T 3uve_A            3 GSMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN---RRIV   79 (286)
T ss_dssp             ---CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT---CCEE
T ss_pred             CCCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC---CceE
Confidence            346678999999999999999999999999999999999887                334444444444332   3688


Q ss_pred             EEEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CC
Q 044923           69 YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RG  147 (214)
Q Consensus        69 ~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g  147 (214)
                      ++++|++|+++++++++++.+++|++|+||||||..... .++.+.+.++|++++++|+.|++.++++++|+|.+++ .|
T Consensus        80 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g  158 (286)
T 3uve_A           80 TAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGG  158 (286)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCc
Confidence            999999999999999999999999999999999987543 2467889999999999999999999999999998765 68


Q ss_pred             eEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          148 SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       148 ~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +||++||..+..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++.+
T Consensus       159 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          159 SIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred             EEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999975

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3e-44  Score=284.49  Aligned_cols=195  Identities=25%  Similarity=0.410  Sum_probs=180.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.....  .++.++++|++|+++++++++++.
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS--GKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS--SCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC--CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888887765432  368899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y  167 (214)
                      +++|++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+. .+.+.+..|
T Consensus        84 ~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHHSCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhh
Confidence            999999999999998754  36788999999999999999999999999999998888999999999986 788999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  201 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE  201 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc
Confidence            9999999999999999999999999999999999998654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=7.7e-45  Score=289.20  Aligned_cols=195  Identities=28%  Similarity=0.429  Sum_probs=181.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999988888888876543   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||....  .++.+.+.++|++.+++|+.|++.++++++|.|.+++.|+||++||..+..+.+....|+
T Consensus        99 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  176 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYT  176 (271)
T ss_dssp             HHTCCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HHCCCCCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHH
Confidence            999999999999998754  357788999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  216 (271)
T 4ibo_A          177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL  216 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc
Confidence            9999999999999999999999999999999999987643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-44  Score=286.90  Aligned_cols=196  Identities=31%  Similarity=0.428  Sum_probs=178.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG---GQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888888776543   367899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--CCCCCcc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--GGVTSHA  166 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  166 (214)
                      +.+|++|+||||||..... .++.+.+.++|++++++|+.|++.+++.++|+|++++.|+||++||..+..  +.++..+
T Consensus       101 ~~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~  179 (283)
T 3v8b_A          101 LKFGHLDIVVANAGINGVW-APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA  179 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCB-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHH
T ss_pred             HHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchH
Confidence            9999999999999986432 357889999999999999999999999999999998889999999999987  7788999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++....
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence            999999999999999999999999999999999999997654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=7.7e-44  Score=280.58  Aligned_cols=197  Identities=22%  Similarity=0.386  Sum_probs=180.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeC--CCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV--TKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~~~~~~~~   86 (214)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.....  .++.++.+|+  +|++++++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG--RQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--CCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CCceEEEEecccCCHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888777765432  2468899999  999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.+|++|+||||||...+. .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.+...+
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  164 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGA  164 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCch
Confidence            999999999999999986432 3578899999999999999999999999999999988899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |++||+|++.|+++++.|+++. |+||+|+||+++|++....+
T Consensus       165 Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~  206 (252)
T 3f1l_A          165 YAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF  206 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC
Confidence            9999999999999999999887 99999999999999976543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=8.4e-44  Score=279.60  Aligned_cols=193  Identities=28%  Similarity=0.455  Sum_probs=177.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....   .++.++++|++|+++++++++++.
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~   79 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG---AKVHVLELDVADRQGVDAAVASTV   79 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888877777765432   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|.+++ |+||++||..+..+.+....|+
T Consensus        80 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~  156 (247)
T 2jah_A           80 EALGGLDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQ  156 (247)
T ss_dssp             HHHSCCSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHH
Confidence            999999999999998643  3578889999999999999999999999999998776 9999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       157 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  195 (247)
T 2jah_A          157 ATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence            999999999999999999999999999999999998754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.8e-44  Score=285.84  Aligned_cols=194  Identities=34%  Similarity=0.510  Sum_probs=179.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....   .++.++++|++|+++++++++++.+
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG---GEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT---CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999988888887775432   3678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y~  168 (214)
                      ++|++|+||||||...+. .++.+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+. .+.+...+|+
T Consensus        82 ~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  160 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAM-GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA  160 (280)
T ss_dssp             HHSCCCEEEECCCCCCSC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHH
Confidence            999999999999986432 35778899999999999999999999999999999888999999999988 7888999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       161 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          161 ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence            999999999999999999999999999999999998765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.4e-44  Score=284.76  Aligned_cols=194  Identities=26%  Similarity=0.369  Sum_probs=171.8

Q ss_pred             CCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         5 ~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      ..|..++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++...         .++.++++|++|++++++++
T Consensus         8 ~~m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~   78 (266)
T 3p19_A            8 QQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL---------PNTLCAQVDVTDKYTFDTAI   78 (266)
T ss_dssp             -------CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC---------TTEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc---------CCceEEEecCCCHHHHHHHH
Confidence            346667889999999999999999999999999999999998755433211         15788999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      +++.+.+|++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||..+..+.+..
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~  156 (266)
T 3p19_A           79 TRAEKIYGPADAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDH  156 (266)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCC
Confidence            9999999999999999998754  35788899999999999999999999999999998888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ..|++||+++++|+++++.|++++||+||+|+||+++|++.....
T Consensus       157 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          157 AAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc
Confidence            999999999999999999999999999999999999999977543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-45  Score=294.47  Aligned_cols=196  Identities=21%  Similarity=0.282  Sum_probs=180.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA---KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~---~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      .+++||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++..... ..++.+++||++|+++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP-NAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT-TCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC-CCeEEEEECCCCCHHHHHHHHH
Confidence            458999999999999999999999999998   999999999888888888765432 2367889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.+.+|++|+||||||...+. .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.+...
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGS-DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCC-CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHhcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            9999999999999999986432 357888999999999999999999999999999988889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|++||+|++.|+++++.|++++||+||+|+||+|+|++..
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL  227 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence            99999999999999999999999999999999999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-44  Score=285.52  Aligned_cols=194  Identities=29%  Similarity=0.518  Sum_probs=175.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-------------CCcchhhHHHHhhccCCCCCCceEEEeeCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-------------KDDLGESVCEDISSSSSSANGCSYVHCDVT   75 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-------------~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   75 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+.+....   .++.++++|++
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~   87 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG---RKALTRVLDVR   87 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT---CCEEEEECCTT
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEEcCCC
Confidence            4689999999999999999999999999999999998             4455555555555432   36789999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           76 KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        76 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      |+++++++++++.+++|++|+||||||...+.  ++.+.+.++|++++++|+.|++.+++.++|+|++++ .|+||++||
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWG--RVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            99999999999999999999999999987543  578889999999999999999999999999998875 789999999


Q ss_pred             CCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          155 VCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       155 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..+..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          166 SAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             hhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence            99999999999999999999999999999999999999999999999998653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.4e-44  Score=285.15  Aligned_cols=191  Identities=35%  Similarity=0.562  Sum_probs=176.5

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG------SKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999877776666542      25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.+|++|+||||||....  .++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||..+..+.+...+|
T Consensus        96 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAY  173 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhH
Confidence            9999999999999998754  35788999999999999999999999999999999888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++..
T Consensus       174 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  212 (277)
T 4dqx_A          174 VASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT  212 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh
Confidence            999999999999999999999999999999999999843

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=6e-44  Score=282.16  Aligned_cols=193  Identities=24%  Similarity=0.316  Sum_probs=177.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++....   .++.++++|++|+++++++++++.++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG---VKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999987 788877777777776543   36889999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+..+.+.+..|++|
T Consensus        80 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (258)
T 3oid_A           80 FGRLDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVS  157 (258)
T ss_dssp             HSCCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHH
Confidence            9999999999997643  35788899999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |++++.|+++++.|++++||+||+|+||+++|++.+.+.
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          158 KAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence            999999999999999999999999999999999987653

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=8e-44  Score=284.62  Aligned_cols=193  Identities=31%  Similarity=0.471  Sum_probs=174.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC------------cchhhHHHHhhccCCCCCCceEEEeeCCCH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD------------DLGESVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|++            +.+++..+.+....   .++.++++|++|+
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~   83 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG---RRCISAKVDVKDR   83 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC---CeEEEEeCCCCCH
Confidence            58999999999999999999999999999999999973            33344444444332   3688999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      ++++++++++.+.+|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|.+++.|+||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999999999999999999999998754  3578899999999999999999999999999999888899999999999


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          158 VIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       158 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..+.+....|++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       162 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          162 HSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence            99999999999999999999999999999999999999999999998753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.6e-44  Score=282.15  Aligned_cols=194  Identities=25%  Similarity=0.383  Sum_probs=176.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~   78 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP---GQILTVQMDVRNTDDIQKMIEQID   78 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST---TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888877776543   368899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhh-ccCCCCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +++|++|+||||||....  .++.+.+.++|++++++|+.+++.++++++|+| ++.+.|+||++||..+..+.+....|
T Consensus        79 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  156 (257)
T 3imf_A           79 EKFGRIDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHS  156 (257)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHH
Confidence            999999999999998643  357888999999999999999999999999999 44557999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELG-RFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||+|+++|+++++.|++ ++||+||+|+||+++|++...
T Consensus       157 ~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          157 AAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchh
Confidence            9999999999999999997 779999999999999997543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.7e-44  Score=282.47  Aligned_cols=192  Identities=32%  Similarity=0.481  Sum_probs=177.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~   75 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG------KKARAIAADISDPGSVKALFAEIQ   75 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC------TTEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999887777766651      257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+|++|+||||||....  .++.+.+.++|++.+++|+.|++.++++++|+|++++ .|+||++||..+..+.+.+.+|
T Consensus        76 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (247)
T 3rwb_A           76 ALTGGIDILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAY  153 (247)
T ss_dssp             HHHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHH
T ss_pred             HHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhh
Confidence            999999999999998743  3577889999999999999999999999999998876 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++....
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  194 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc
Confidence            99999999999999999999999999999999999987643

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-43  Score=285.49  Aligned_cols=195  Identities=27%  Similarity=0.405  Sum_probs=180.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.....  .++.++++|++|+++++++++++.
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA--GNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC--CcEEEEEEeCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888888765432  367899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y  167 (214)
                      +++|++|+||||||....  .++.+.+.++|++.+++|+.|++.++++++|.|++++.|+||++||..+. .+.+....|
T Consensus       115 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  192 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHY  192 (293)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHH
Confidence            999999999999998754  35788999999999999999999999999999999888999999999986 788999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|+++++.|++++||+||+|+||++.|++...
T Consensus       193 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  232 (293)
T 3rih_A          193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD  232 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh
Confidence            9999999999999999999999999999999999998654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=6e-44  Score=285.46  Aligned_cols=198  Identities=31%  Similarity=0.471  Sum_probs=173.8

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      +..++.+|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++....+  .++.++++|++|+++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS--GTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCS--SCEEEECCCTTCHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccC--CcEEEEeCCCCCHHHHHHHHH
Confidence            445788999999999999999999999999999999999 55566666666654322  367889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.+++|++|+||||||....  .++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||..+..+.+...
T Consensus        97 ~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  174 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKS  174 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCch
Confidence            999999999999999998754  357788999999999999999999999999999998889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++....
T Consensus       175 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          175 AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh
Confidence            9999999999999999999999999999999999999997654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.2e-44  Score=284.42  Aligned_cols=192  Identities=36%  Similarity=0.585  Sum_probs=177.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG------CGAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC------CcceEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999887777766651      257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|.|++++.|+||++||..+..+.+....|+
T Consensus        99 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~  176 (277)
T 3gvc_A           99 AAFGGVDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYG  176 (277)
T ss_dssp             HHHSSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHH
Confidence            999999999999998754  357889999999999999999999999999999988899999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  216 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA  216 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHh
Confidence            9999999999999999999999999999999999987653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.1e-44  Score=285.01  Aligned_cols=195  Identities=31%  Similarity=0.429  Sum_probs=179.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++++|++|+++++++++++.+
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999888888777765322  3688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .|+||++||..+..+.+....|+
T Consensus        95 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  172 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC  172 (266)
T ss_dssp             HHTSCSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHH
Confidence            99999999999998754  3578889999999999999999999999999998865 68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++|+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       173 asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  212 (266)
T 4egf_A          173 TSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV  212 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh
Confidence            9999999999999999999999999999999999987654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.3e-44  Score=283.27  Aligned_cols=191  Identities=29%  Similarity=0.443  Sum_probs=170.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....   .++.++.+|++|+++++++++++.+.
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999988888888876643   25788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||..+..+.+....|++|
T Consensus        79 ~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  156 (264)
T 3tfo_A           79 WGRIDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCAT  156 (264)
T ss_dssp             HSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHH
Confidence            9999999999998743  35788899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+|+++|+++++.|+ + ||+||+|+||+++|++....
T Consensus       157 Kaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~  192 (264)
T 3tfo_A          157 KFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTI  192 (264)
T ss_dssp             HHHHHHHHHHHHHHC-S-SEEEEEEEECCC--------
T ss_pred             HHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccc
Confidence            999999999999998 5 99999999999999997654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=5.2e-44  Score=284.11  Aligned_cols=194  Identities=32%  Similarity=0.531  Sum_probs=177.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++| +.+..+++.+++....   .++.++++|++|+++++++++++
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999888 5555666666665543   26788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+++|++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|+|.+++.|+||++||..+..+.+....|
T Consensus       101 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  178 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANY  178 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhH
Confidence            9999999999999998754  35778899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE  218 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc
Confidence            9999999999999999999999999999999999998754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.8e-44  Score=280.68  Aligned_cols=196  Identities=33%  Similarity=0.515  Sum_probs=164.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.+++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.      .++.++++|++|++++++++++
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~   74 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG------AAVRFRNADVTNEADATAALAF   74 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999887776666552      2578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCC--CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------CCCeEEEecCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKP--NILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA------GRGSIISTASVCGV  158 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~g~iv~~sS~~~~  158 (214)
                      +.+++|++|+||||||...+...  ...+.+.++|++.+++|+.|++.++++++|+|+++      +.|+||++||..+.
T Consensus        75 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tpc_A           75 AKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF  154 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhc
Confidence            99999999999999998754311  11257889999999999999999999999999885      57899999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+.+...+|++||++++.|+++++.|++++||+||+|+||+++|++...+
T Consensus       155 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  204 (257)
T 3tpc_A          155 DGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM  204 (257)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC
Confidence            99999999999999999999999999999999999999999999997654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.4e-44  Score=285.29  Aligned_cols=197  Identities=27%  Similarity=0.423  Sum_probs=171.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.....  ..+.++++|++|+++++++++++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG--NIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999888888777765433  135889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccCCCCCcc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +++|++|+||||||...+. .++.+.+.++|++++++|+.|++.+++.++|.|++++  .|+||++||..+..+.++...
T Consensus       107 ~~~g~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~  185 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNVPP-VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAP  185 (281)
T ss_dssp             HHHSCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChh
Confidence            9999999999999986432 3578889999999999999999999999999998875  689999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+.+
T Consensus       186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  227 (281)
T 4dry_A          186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM  227 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh
Confidence            999999999999999999999999999999999999997654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.1e-44  Score=283.14  Aligned_cols=193  Identities=28%  Similarity=0.426  Sum_probs=169.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.+
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG------DDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT------SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999888777776663      2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccCCCCCccc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      ++|++|+||||||...+. .++.+.+.++|++.+++|+.|++.++++++|.|++++  .|+||++||..+..+.+....|
T Consensus        99 ~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  177 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPY  177 (272)
T ss_dssp             HHSCCCEEEECCCCCCCS-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHH
Confidence            999999999999986442 3577889999999999999999999999999998875  6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.+.+.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (272)
T 4dyv_A          178 TATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK  219 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             HHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence            999999999999999999999999999999999999987653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.7e-43  Score=283.36  Aligned_cols=196  Identities=21%  Similarity=0.305  Sum_probs=175.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-------hhhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-------GESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++....   .++.++++|++|+++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG---GQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT---SEEEEEECCTTSHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHH
Confidence            46889999999999999999999999999999999998774       344455554432   26889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG  161 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  161 (214)
                      ++++++.+++|++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            9999999999999999999998754  36788999999999999999999999999999999888999999999998876


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC-cccCccccccC
Q 044923          162 -VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPY-AVSSPMAKGFL  209 (214)
Q Consensus       162 -~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg-~v~t~~~~~~~  209 (214)
                       +....|++||+|+++|+++++.|++++||+||+|+|| .+.|++.++..
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~  209 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL  209 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc
Confidence             7889999999999999999999999999999999999 69999876543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7e-44  Score=284.93  Aligned_cols=199  Identities=27%  Similarity=0.407  Sum_probs=165.0

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |..++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++....   .++.++++|++|+++++++++
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~   99 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLADLSSHQATVD   99 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTTSGGGHHHHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHH
Confidence            445689999999999999999999999999999999985 6666666666665543   368899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGV  162 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~  162 (214)
                      ++.+++|++|+||||||.......++.+.+.++|++++++|+.|++.++++++|+|.+++   .|+||++||..+..+.+
T Consensus       100 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~  179 (280)
T 4da9_A          100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP  179 (280)
T ss_dssp             HHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------
T ss_pred             HHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC
Confidence            999999999999999998533334678889999999999999999999999999998765   68999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++....
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  225 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV  225 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc
Confidence            9999999999999999999999999999999999999999997654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.1e-43  Score=280.75  Aligned_cols=193  Identities=33%  Similarity=0.519  Sum_probs=176.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|++++++++++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~   75 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG------PAAYAVQMDVTRQDSIDAAIAA   75 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CCceEEEeeCCCHHHHHHHHHH
Confidence            3346899999999999999999999999999999999999887777766652      2578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~  165 (214)
                      +.+++|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|.+++ .|+||++||..+..+.+...
T Consensus        76 ~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (259)
T 4e6p_A           76 TVEHAGGLDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVA  153 (259)
T ss_dssp             HHHHSSSCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBH
T ss_pred             HHHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCCh
Confidence            99999999999999998754  3577889999999999999999999999999998765 68999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  195 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG  195 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh
Confidence            999999999999999999999999999999999999998654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.9e-43  Score=275.45  Aligned_cols=206  Identities=26%  Similarity=0.373  Sum_probs=183.7

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeC--CCHH
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV--TKEK   78 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~   78 (214)
                      |.........++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.....  ..+.++.+|+  +|++
T Consensus         2 m~~~~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~d~d~~~~~   79 (247)
T 3i1j_A            2 MFDYSAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ--PQPLIIALNLENATAQ   79 (247)
T ss_dssp             CCCCCCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS--CCCEEEECCTTTCCHH
T ss_pred             CCCCCCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC--CCceEEEeccccCCHH
Confidence            44444444568999999999999999999999999999999999999888888888776543  2456777777  9999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV  158 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  158 (214)
                      +++++++++.+.+|++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+.
T Consensus        80 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~  158 (247)
T 3i1j_A           80 QYRELAARVEHEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR  158 (247)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc
Confidence            99999999999999999999999986433 35778899999999999999999999999999999888999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCccccccC
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+.+.+..|+++|++++.|+++++.|+.+ +||+||+|+||+++|++..+..
T Consensus       159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~  210 (247)
T 3i1j_A          159 KGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY  210 (247)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc
Confidence            99999999999999999999999999977 8999999999999999976544

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1e-43  Score=277.14  Aligned_cols=188  Identities=18%  Similarity=0.249  Sum_probs=167.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..      ++.++++|++|+++++++++++.+.+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN------AVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------CceEEECCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999999998888777776632      47889999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      |++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|+|++++ ++||++||..+..+.+....|++||
T Consensus        76 g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asK  152 (235)
T 3l6e_A           76 GLPELVLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASK  152 (235)
T ss_dssp             CSCSEEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHH
T ss_pred             CCCcEEEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHH
Confidence            999999999998643  3577889999999999999999999999999998875 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+++|+++++.|++++||+||+|+||+++|++....
T Consensus       153 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          153 WGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----
T ss_pred             HHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc
Confidence            9999999999999999999999999999999997654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-43  Score=281.21  Aligned_cols=205  Identities=34%  Similarity=0.591  Sum_probs=177.5

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI   80 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~   80 (214)
                      |..+.....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..... ..++.++++|++|++++
T Consensus         1 m~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A            1 MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-DAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             ---------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-TCCEEEEECCTTSHHHH
T ss_pred             CCCCCCCCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CceEEEEEccCCCHHHH
Confidence            44444445568999999999999999999999999999999999998877777666654321 12578899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      +++++++.+++|++|+||||||..... .++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||..+..+
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (267)
T 1iy8_A           80 EAYVTATTERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG  158 (267)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC
Confidence            999999999999999999999986431 3567889999999999999999999999999998888899999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+....|+++|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          159 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhc
Confidence            99999999999999999999999999999999999999999998654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.5e-43  Score=280.88  Aligned_cols=194  Identities=24%  Similarity=0.331  Sum_probs=170.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-------hhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-------ESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+..       ++..+.+....   .++.++++|++|+++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~   78 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG---GQGLALKCDIREEDQVR   78 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT---SEEEEEECCTTCHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC---CeEEEEeCCCCCHHHHH
Confidence            468999999999999999999999999999999999987653       33444443332   36789999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-  160 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-  160 (214)
                      ++++++.+++|++|+||||||...+  .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+ 
T Consensus        79 ~~~~~~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  156 (274)
T 3e03_A           79 AAVAATVDTFGGIDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA  156 (274)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC
Confidence            9999999999999999999998754  3577889999999999999999999999999999988899999999999887 


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCC-cccCccccc
Q 044923          161 -GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPY-AVSSPMAKG  207 (214)
Q Consensus       161 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg-~v~t~~~~~  207 (214)
                       .+....|++||+|++.|+++++.|++++||+||+|+|| .++|++...
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~  205 (274)
T 3e03_A          157 WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM  205 (274)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh
Confidence             67888999999999999999999999999999999999 699998743

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=9e-44  Score=282.33  Aligned_cols=192  Identities=29%  Similarity=0.478  Sum_probs=167.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG------KDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceEEEEeecCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999877776655542      257899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||...+  .++.+.+.++|++++++|+.|++.++++++|.|++++.|+||++||..+..+.+....|+
T Consensus        97 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  174 (266)
T 3grp_A           97 REMEGIDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYC  174 (266)
T ss_dssp             HHHTSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHH
Confidence            999999999999998754  356788999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  214 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL  214 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc
Confidence            9999999999999999999999999999999999987653

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.5e-43  Score=277.91  Aligned_cols=193  Identities=30%  Similarity=0.487  Sum_probs=175.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.+|++|||||++|||+++|++|+++|++|++++++ .+..+++.+++....   .++.++++|++|+++++++++++.+
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQANVADADEVKAMIKEVVS   78 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999999999988774 466666666665543   3678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+..+.+...+|++
T Consensus        79 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (246)
T 3osu_A           79 QFGSLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVA  156 (246)
T ss_dssp             HHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHH
Confidence            99999999999998754  3578889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ||++++.|+++++.|++++||+||+|+||++.|++.+.+
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          157 TKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc
Confidence            999999999999999999999999999999999987653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.3e-43  Score=279.82  Aligned_cols=194  Identities=37%  Similarity=0.524  Sum_probs=176.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.....   ++.++++|++|+++++++++++.+
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG---KALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999988888888765432   678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCC--CCCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGG--VTSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~--~~~~~  166 (214)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|.+++ .|+||++||..+..+.  +....
T Consensus       106 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             HHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            99999999999998754  3577889999999999999999999999999998876 4899999999887654  36688


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |++||++++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  225 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL  225 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence            999999999999999999999999999999999999997643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.7e-43  Score=282.49  Aligned_cols=192  Identities=33%  Similarity=0.487  Sum_probs=175.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG---HDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888888776543   36889999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHH--hhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAAR--VMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +|++|+||||||...+  .++.+.+.++|++.+++|+.|++.+++.++|  .|.+++.|+||++||..+..+.+....|+
T Consensus        99 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  176 (279)
T 3sju_A           99 FGPIGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT  176 (279)
T ss_dssp             HCSCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             cCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH
Confidence            9999999999998754  3577889999999999999999999999999  58777789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (279)
T 3sju_A          177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAER  215 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHH
Confidence            999999999999999999999999999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.3e-43  Score=278.32  Aligned_cols=188  Identities=27%  Similarity=0.385  Sum_probs=174.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.      .++.++++|++|+++++++++++.+
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG------PRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999888777766652      2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.+....|++
T Consensus        79 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  154 (255)
T 4eso_A           79 TLGAIDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSA  154 (255)
T ss_dssp             HHSSEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHH
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHH
Confidence            99999999999998753  35788899999999999999999999999999976  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence            99999999999999999999999999999999998653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.8e-43  Score=281.81  Aligned_cols=193  Identities=20%  Similarity=0.235  Sum_probs=178.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888888876643   368899999999999999999998


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +. |++|+||||||...+  .++.+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+..+.+....|+
T Consensus       106 ~~-g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~  182 (275)
T 4imr_A          106 AI-APVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYA  182 (275)
T ss_dssp             HH-SCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             Hh-CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhH
Confidence            88 999999999998754  357788999999999999999999999999999988889999999999999888888899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  221 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD  221 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc
Confidence            999999999999999999999999999999999998654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.4e-43  Score=279.95  Aligned_cols=196  Identities=23%  Similarity=0.333  Sum_probs=176.4

Q ss_pred             CCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         5 ~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      +.|.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...... ..+..+.+|++|++++++++
T Consensus         2 ~~m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~   80 (267)
T 3t4x_A            2 NAMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD-AILQPVVADLGTEQGCQDVI   80 (267)
T ss_dssp             -CCCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT-CEEEEEECCTTSHHHHHHHH
T ss_pred             CccccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEecCCCCHHHHHHHH
Confidence            35777899999999999999999999999999999999999998888888877655322 25778899999999887665


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                          +++|++|+||||||...+  .++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||..+..+.+..
T Consensus        81 ----~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  154 (267)
T 3t4x_A           81 ----EKYPKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEM  154 (267)
T ss_dssp             ----HHCCCCSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTC
T ss_pred             ----HhcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcc
Confidence                467999999999998754  35778899999999999999999999999999998888999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+|++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (267)
T 3t4x_A          155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVET  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHH
Confidence            9999999999999999999999999999999999999997654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.2e-43  Score=282.59  Aligned_cols=193  Identities=26%  Similarity=0.446  Sum_probs=179.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....   .++.++++|++|+++++++++++.+
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            4889999999999999999999999999999999999988888888776543   3688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|+|.+++ .|+||++||..+..+.++...|+
T Consensus       105 ~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  182 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYG  182 (301)
T ss_dssp             HHSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             hCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHH
Confidence            99999999999998754  3567889999999999999999999999999998876 78999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|++.|+++++.|+++.||+|++|+||+++|++...
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  221 (301)
T 3tjr_A          183 VAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSN  221 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccc
Confidence            999999999999999999999999999999999998764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-43  Score=277.29  Aligned_cols=195  Identities=25%  Similarity=0.364  Sum_probs=173.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999887777777665432   257889999999999999999999


Q ss_pred             HHc-CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           89 SQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+ |++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+....|
T Consensus        94 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (273)
T 1ae1_A           94 HVFDGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLY  171 (273)
T ss_dssp             HHTTSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchh
Confidence            999 999999999998643  35778899999999999999999999999999988878999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++|++++.|+++++.|++++||+||+|+||+++|++....
T Consensus       172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  212 (273)
T 1ae1_A          172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA  212 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhh
Confidence            99999999999999999999999999999999999986543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-43  Score=274.81  Aligned_cols=194  Identities=27%  Similarity=0.374  Sum_probs=180.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++..++..+++....   .++.++++|++|+++++++++++.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988888877776543   3688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++...|++
T Consensus        79 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCA  156 (247)
T ss_dssp             TTCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHH
Confidence            99999999999998754  3567889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ||++++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          157 AKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence            999999999999999999999999999999999997654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.1e-42  Score=276.71  Aligned_cols=194  Identities=28%  Similarity=0.422  Sum_probs=173.5

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      +..+++||++|||||++|||+++|++|+++|++|++++++ .+..+++.+++....   .++.++++|++|+++++++++
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHH
Confidence            3456899999999999999999999999999999997765 455666666665543   368899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC-cccCCCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC-GVIGGVTS  164 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~-~~~~~~~~  164 (214)
                      ++.+++|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|++  .|+||++||.. +..+.+..
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  164 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKH  164 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTC
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCC
Confidence            999999999999999998743  35788899999999999999999999999999977  58999999988 56788899


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++..+
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  207 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE  207 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh
Confidence            9999999999999999999999999999999999999999763

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.5e-43  Score=280.39  Aligned_cols=192  Identities=23%  Similarity=0.372  Sum_probs=167.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC---cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD---DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.   +.++++.+++....   .++.++++|++|+++++++++
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG---AKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT---CEEEEEECCCCSHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHH
Confidence            468999999999999999999999999999999987754   34455555555432   368899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.+++|++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+...
T Consensus        84 ~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~  159 (262)
T 3ksu_A           84 FAEKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYS  159 (262)
T ss_dssp             HHHHHHCSEEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCc
Confidence            999999999999999998754  35778899999999999999999999999999954  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  201 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYG  201 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence            999999999999999999999999999999999999999765

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=3.1e-43  Score=280.75  Aligned_cols=192  Identities=24%  Similarity=0.324  Sum_probs=176.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++++|++|+++++++++++.+
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG--RRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999998888777777654322  3588999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|++
T Consensus       102 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS  179 (277)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHH
T ss_pred             HcCCCCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            99999999999997643  3577889999999999999999999999999998887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ||+|+++|+++++.|++++||+||+|+||++.|++.
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG  215 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence            999999999999999999999999999999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=9.8e-43  Score=275.77  Aligned_cols=197  Identities=26%  Similarity=0.366  Sum_probs=178.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....+  .++.++++|++|++++++++++
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~   78 (263)
T 3ai3_A            1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVES   78 (263)
T ss_dssp             CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHH
Confidence            44568899999999999999999999999999999999998877777666654311  2578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....
T Consensus        79 ~~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  156 (263)
T 3ai3_A           79 VRSSFGGADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPI  156 (263)
T ss_dssp             HHHHHSSCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcch
Confidence            99999999999999998653  3577889999999999999999999999999998877899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  197 (263)
T 3ai3_A          157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK  197 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhh
Confidence            99999999999999999999999999999999999998653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-43  Score=277.72  Aligned_cols=196  Identities=31%  Similarity=0.515  Sum_probs=177.4

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....   .++.++++|++|+++++++++++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   78 (262)
T 1zem_A            2 SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVTSEEAVIGTVDSV   78 (262)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999887777777765432   25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.+|++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|
T Consensus        79 ~~~~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (262)
T 1zem_A           79 VRDFGKIDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAY  157 (262)
T ss_dssp             HHHHSCCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHH
T ss_pred             HHHhCCCCEEEECCCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchH
Confidence            9999999999999998622 235678899999999999999999999999999988878999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       158 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          158 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence            9999999999999999999999999999999999998654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=9.3e-43  Score=273.93  Aligned_cols=192  Identities=31%  Similarity=0.455  Sum_probs=166.9

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |..++++|++|||||++|||++++++|+++|++|++++|+. +.+++   .+....   .++.++++|++|+++++++++
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~---~~~~~~~~Dv~~~~~v~~~~~   74 (249)
T 2ew8_A            1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG---RRVLTVKCDVSQPGDVEAFGK   74 (249)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT---CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC---CcEEEEEeecCCHHHHHHHHH
Confidence            34568899999999999999999999999999999999987 55443   232221   257889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      ++.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+...
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  152 (249)
T 2ew8_A           75 QVISTFGRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYT  152 (249)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCH
T ss_pred             HHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCch
Confidence            999999999999999998643  356788999999999999999999999999999888789999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++..
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence            99999999999999999999999999999999999999876

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.3e-42  Score=282.19  Aligned_cols=192  Identities=33%  Similarity=0.510  Sum_probs=172.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------CcchhhHHHHhhccCCCCCCceEEEeeCCCH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK------------DDLGESVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+....   .++.++++|++|+
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~  119 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG---RRIIARQADVRDL  119 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCCH
Confidence            5889999999999999999999999999999999876            333344444444332   3688999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCC
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVC  156 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~  156 (214)
                      ++++++++++.+++|++|+||||||...+.  ++.+.+.++|++++++|+.|++.++++++|.|.+++ .|+||++||..
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQG--EVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            999999999999999999999999987543  578899999999999999999999999999998765 68999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          157 GVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       157 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +..+.++...|++||+|++.|+++++.|++++||+||+|+||+++|++..
T Consensus       198 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          198 GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence            99999999999999999999999999999999999999999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=9e-43  Score=273.51  Aligned_cols=192  Identities=33%  Similarity=0.555  Sum_probs=174.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++....   .++.++++|++|+++++++++++.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG---SDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998 7666776666665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++
T Consensus        79 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVA  156 (246)
T ss_dssp             HHSCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHH
Confidence            99999999999998643  3567889999999999999999999999999998887899999999999989999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  194 (246)
T 2uvd_A          157 AKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV  194 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh
Confidence            99999999999999999999999999999999998654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-42  Score=273.94  Aligned_cols=196  Identities=28%  Similarity=0.440  Sum_probs=176.4

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++.+|++|+++++++++++
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~   93 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAV   93 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHH
Confidence            4468899999999999999999999999999999999998877777666622211  25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC-cccCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC-GVIGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~-~~~~~~~~~~  166 (214)
                      .+.+|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.. +..+.+....
T Consensus        94 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  171 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA  171 (267)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChh
Confidence            9999999999999998643  356788999999999999999999999999999988889999999998 8888889999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|++++.|+++++.|+++.||+||+|+||+++|++...
T Consensus       172 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  212 (267)
T 1vl8_A          172 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA  212 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc
Confidence            99999999999999999999999999999999999998653

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-42  Score=275.37  Aligned_cols=193  Identities=27%  Similarity=0.426  Sum_probs=172.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++....   .++.++++|++|+++++++.+ ..
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~-~~  101 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG---GSAEAVVADLADLEGAANVAE-EL  101 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT---CEEEEEECCTTCHHHHHHHHH-HH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHH-HH
Confidence            46889999999999999999999999999999999965 44555656655432   367889999999999999954 45


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||...+  .++.+.+.++|++++++|+.|++.++++++|.|.+++.|+||++||..+..+.+....|+
T Consensus       102 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  179 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYA  179 (273)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             HhcCCCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHH
Confidence            667999999999998754  357888999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|++.|+++++.|++++||+||+|+||++.|++....
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  219 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL  219 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence            9999999999999999999999999999999999987643

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.3e-42  Score=273.64  Aligned_cols=195  Identities=29%  Similarity=0.432  Sum_probs=173.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++....   .++.++.+|++|+++++++++++.+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988888888776543   2678999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||..... .++.+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+..+.+....|++
T Consensus       103 ~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  181 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFG-GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTA  181 (262)
T ss_dssp             HHSCCSEEEECCCCCCCS-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCccCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHH
Confidence            999999999999984332 3567889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.|+++++.|+++.||+|++|+||+++|++....
T Consensus       182 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  220 (262)
T 3rkr_A          182 SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL  220 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc
Confidence            999999999999999999999999999999999997654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.3e-43  Score=276.62  Aligned_cols=191  Identities=27%  Similarity=0.368  Sum_probs=166.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+..+++.+++....   .++.++++|++|+++++++++++.
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG---GKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999874 55666666666665543   267889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|++  .|+||++||..+..+.+.+..|+
T Consensus       101 ~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  176 (267)
T 3u5t_A          101 EAFGGVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYA  176 (267)
T ss_dssp             HHHSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHH
Confidence            999999999999998753  35788899999999999999999999999999976  48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++..+
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          177 AAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence            999999999999999999999999999999999999754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.3e-42  Score=277.21  Aligned_cols=191  Identities=30%  Similarity=0.451  Sum_probs=168.2

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------CcchhhHHHHhhccCCCCCCceEEEeeCC
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK------------DDLGESVCEDISSSSSSANGCSYVHCDVT   75 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   75 (214)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+....   .++.++++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~   84 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVR   84 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTT
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCC
Confidence            346899999999999999999999999999999999987            344444444444332   36889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           76 KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        76 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      |+++++++++++.+++|++|+||||||.....      .+.++|++++++|+.|++.++++++|+|.+++ .|+||++||
T Consensus        85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (278)
T 3sx2_A           85 DRESLSAALQAGLDELGRLDIVVANAGIAPMS------AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS  158 (278)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCS------STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence            99999999999999999999999999986432      25889999999999999999999999998765 689999999


Q ss_pred             CCcccCC----CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          155 VCGVIGG----VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       155 ~~~~~~~----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..+..+.    +....|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       159 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          159 SAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             GGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             HHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence            9998876    7778999999999999999999999999999999999999998753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.2e-42  Score=272.55  Aligned_cols=192  Identities=46%  Similarity=0.736  Sum_probs=174.9

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..      .+.++++|++|++++++++++
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------CceEEEecCCCHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998777666555532      367889999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+++|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|++++.|+||++||..+..+.+....
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHG  152 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchh
Confidence            99999999999999998753  3567889999999999999999999999999999887899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++|++++.|+++++.|++++||+||+|+||++.|++..
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence            9999999999999999999999999999999999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=2.1e-42  Score=273.48  Aligned_cols=194  Identities=35%  Similarity=0.517  Sum_probs=171.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|++|||||++|||++++++|+++|++|++++|+.+. ++++.+++....+  .++.++.+|++|+++++++++++.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998876 6666666644211  2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+.+....|++
T Consensus        80 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  157 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             HHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHH
Confidence            99999999999998643  3567889999999999999999999999999998887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ||++++.|+++++.|++++||+||+|+||+++|++....
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  196 (260)
T 1x1t_A          158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence            999999999999999999999999999999999987653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.3e-42  Score=272.28  Aligned_cols=194  Identities=31%  Similarity=0.419  Sum_probs=176.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|+++++++++++.+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG---LSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999887777766665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|++
T Consensus        88 ~~g~iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  166 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNV  166 (260)
T ss_dssp             HHSCCCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHH
Confidence            99999999999997532 13467889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|++++||+||+|+||++.|++...
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (260)
T 2zat_A          167 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV  204 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh
Confidence            99999999999999999999999999999999998653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.1e-42  Score=273.39  Aligned_cols=194  Identities=37%  Similarity=0.501  Sum_probs=168.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++.++.+|++|+++++++++++.
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG------DAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CceEEEEecCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888777766552      257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC----CCeEEEecCCCcccCCCCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG----RGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~~~~~  164 (214)
                      +.++++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.++|+|.+++    .++||++||..+..+.+..
T Consensus        79 ~~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  157 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKP-QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNL  157 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCS-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTC
T ss_pred             HhcCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCc
Confidence            9999999999999987532 3567789999999999999999999999999998764    6789999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ..|+++|+|++.|+++++.|++++||+||+|+||+++|++...++
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  202 (261)
T 3n74_A          158 AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM  202 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc
Confidence            999999999999999999999999999999999999999987654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.1e-42  Score=272.47  Aligned_cols=192  Identities=29%  Similarity=0.451  Sum_probs=171.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++++. +..+++.+++....   .++.++++|++|+++++++++++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence            368999999999999999999999999999999986654 55666666665543   36789999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-CCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-GVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-~~~~~~  166 (214)
                      .+.+|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|++  .|+||++||..+..+ .++...
T Consensus       104 ~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~  179 (271)
T 3v2g_A          104 VEALGGLDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISL  179 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHH
T ss_pred             HHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchH
Confidence            9999999999999998754  36788899999999999999999999999999976  588999999777655 788999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          180 YSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence            99999999999999999999999999999999999998754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=3.4e-42  Score=272.28  Aligned_cols=193  Identities=26%  Similarity=0.367  Sum_probs=176.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.+
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999887777776665432   2578899999999999999999999


Q ss_pred             Hc-CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+ +++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|+
T Consensus        83 ~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG  160 (260)
T ss_dssp             HTTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHH
Confidence            99 899999999998643  356788999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (260)
T 2ae2_A          161 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM  199 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence            999999999999999999999999999999999998654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-42  Score=268.67  Aligned_cols=187  Identities=36%  Similarity=0.555  Sum_probs=170.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++        .+.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------CCEEEEecCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999876665554432        257889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.. ..+.+....|++
T Consensus        74 ~~g~id~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~a  150 (245)
T 1uls_A           74 HLGRLDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAA  150 (245)
T ss_dssp             HHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHH
Confidence            99999999999998643  356788999999999999999999999999999988889999999998 888889999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  188 (245)
T 1uls_A          151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence            99999999999999999999999999999999998654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=3.2e-42  Score=272.41  Aligned_cols=194  Identities=27%  Similarity=0.428  Sum_probs=168.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++||++|||||++|||+++|++|+++|++|+++ .++.+..++..+++....   .++.++++|++|+++++++++++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHH
Confidence            36889999999999999999999999999999998 556666666666665443   25789999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~  166 (214)
                      .+++|++|+||||||...+. .++.+.+.++|++++++|+.|++.++++++|+|++  .|+||++||..+. .+.+....
T Consensus        81 ~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~  157 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALA  157 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHH
T ss_pred             HHHhCCCCEEEECCCccCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHH
Confidence            99999999999999976332 46788999999999999999999999999999987  5899999999988 68889999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |++||+|++.|+++++.|+++. |+||+|+||+++|++...+.
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~  199 (259)
T 3edm_A          158 YATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT  199 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc
Confidence            9999999999999999999886 99999999999999987653

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-42  Score=270.41  Aligned_cols=195  Identities=25%  Similarity=0.362  Sum_probs=175.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ...++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++....   .++.++.+|++|+++++++++++
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG---FDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CeeEEEecCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999887 66666666666665443   36789999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+++|++|+||||||...+  .++.+.+.++|++++++|+.+++.+++.++|+|.+++.++||++||..+..+.+....|
T Consensus        86 ~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY  163 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHH
T ss_pred             HHhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCccc
Confidence            9999999999999998754  35788899999999999999999999999999999888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++||+|++.|+++++.|++++||+|++|+||+++|++.+..
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence            99999999999999999999999999999999999997654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.7e-42  Score=271.20  Aligned_cols=190  Identities=30%  Similarity=0.481  Sum_probs=173.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc--hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL--GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|++|||||++|||+++|++|+++|++|++++|+.+.  +++..+++....   .++.++++|++|+++++++++++.++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD---QKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999998876  666666665432   35788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCCcccCCCCCccchh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|++++. |+||++||..+..+.+....|++
T Consensus        79 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  156 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYST  156 (258)
T ss_dssp             HTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHH
Confidence            9999999999998643  35678899999999999999999999999999988776 89999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence            99999999999999999999999999999999998654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=6.6e-42  Score=270.75  Aligned_cols=186  Identities=19%  Similarity=0.252  Sum_probs=163.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+...+..+..        .+.++.+|++|+++++++++++.
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA--------GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH--------TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc--------CCeEEECCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999987653333222        36789999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||.....  . .+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+..+.+....|+
T Consensus        95 ~~~g~iD~lv~nAg~~~~~--~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  171 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLAE--T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC  171 (260)
T ss_dssp             HHCSCCSEEEECCCCCCCC--C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHH
T ss_pred             HhcCCCCEEEECCCccCCC--C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHH
Confidence            9999999999999987543  2 566789999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +||+|++.|+++++.|+++ +|+||+|+||++.|++..
T Consensus       172 asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~  208 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD  208 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence            9999999999999999998 799999999999998743

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-42  Score=276.41  Aligned_cols=197  Identities=27%  Similarity=0.395  Sum_probs=176.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++........++.++.+|++|+++++++++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998888777777654322111578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-CCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-VTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~~~~~y~  168 (214)
                      ++|++|+||||||...+....+.+.+.++|++++++|+.+++.+++.++|.|.+++ |+||++||..+..+. +....|+
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~  181 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  181 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHH
Confidence            99999999999998654322267889999999999999999999999999998776 999999999998888 8899999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       182 asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~  220 (297)
T 1xhl_A          182 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGA  220 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccc
Confidence            999999999999999999999999999999999998654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=8.4e-42  Score=274.28  Aligned_cols=193  Identities=27%  Similarity=0.415  Sum_probs=171.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.. +...+.+....   .++.++++|++|+++++++++++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987643 33333333322   36889999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+++|++|+||||||...+. .++.+.+.++|++.+++|+.|++.+++.++|+|++  .++||++||..+..+.+....|
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  196 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDY  196 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhH
Confidence            99999999999999986433 35678899999999999999999999999999975  4789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       197 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          197 SATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc
Confidence            9999999999999999999999999999999999998654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-41  Score=269.54  Aligned_cols=196  Identities=30%  Similarity=0.468  Sum_probs=175.6

Q ss_pred             CccCCcEEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGA-GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas-~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..+++|++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.....  .++.++++|++|+++++++++++
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGL--GRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCS--SCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC--CceEEEEeCCCCHHHHHHHHHHH
Confidence            35899999999998 5999999999999999999999999888888887765432  36899999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      .++++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|+|.++ +.++||++||..+..+.+....
T Consensus        96 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  173 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH  173 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHhCCCcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCch
Confidence            9999999999999998654  357788999999999999999999999999999887 6789999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  215 (266)
T 3o38_A          174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT  215 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence            999999999999999999999999999999999999997654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3.3e-42  Score=273.95  Aligned_cols=196  Identities=28%  Similarity=0.451  Sum_probs=173.5

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .++++||++|||||++|||+++|++|+++|++|++++|+. +..+.+.+.+....   .++.++++|++|++++++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG---YKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999999999954 44455555554432   3688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...
T Consensus       101 ~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  178 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTN  178 (271)
T ss_dssp             HHHHHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHhcCCCCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchH
Confidence            99999999999999998754  3567889999999999999999999999999999888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|++++.|+++++.|++++||+|++|+||+++|++.+..
T Consensus       179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  220 (271)
T 4iin_A          179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL  220 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh
Confidence            999999999999999999999999999999999999997654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=5.3e-42  Score=270.40  Aligned_cols=190  Identities=38%  Similarity=0.593  Sum_probs=173.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~   75 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG------DAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC------CceeEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999877666655541      2478899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++
T Consensus        76 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  153 (254)
T 1hdc_A           76 EFGSVDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGA  153 (254)
T ss_dssp             HHSCCCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHH
Confidence            99999999999998643  3567889999999999999999999999999999887899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1hdc_A          154 SKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc
Confidence            99999999999999999999999999999999998654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=3.8e-42  Score=272.01  Aligned_cols=195  Identities=22%  Similarity=0.281  Sum_probs=176.2

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..... ..++.++.+|++|+++++++++++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~   80 (260)
T 2z1n_A            2 DLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS-GAQVDIVAGDIREPGDIDRLFEKA   80 (260)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CCeEEEEEccCCCHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999998877777766653211 125788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+++| +|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|
T Consensus        81 ~~~~g-id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (260)
T 2z1n_A           81 RDLGG-ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALS  157 (260)
T ss_dssp             HHTTC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHhcC-CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchh
Confidence            99999 9999999997643  35678899999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++|++++.|++.++.|++++||+||+|+||+++|++..
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          158 NIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             HHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence            999999999999999999999999999999999999866

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=9.3e-42  Score=274.03  Aligned_cols=191  Identities=22%  Similarity=0.262  Sum_probs=171.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH----------
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK----------   78 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~----------   78 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++....+  .++.++++|++|++          
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSCBCCCC----C
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcccccccccccc
Confidence            57899999999999999999999999999999999 988877777777652222  35788999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCC--------------HHHHHHHHhhhhhHHHHHHHHH
Q 044923           79 -------DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND--------------QAEFERILSVNLVGAFLGTKHA  137 (214)
Q Consensus        79 -------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~  137 (214)
                             +++++++++.+.+|++|+||||||....  .++.+.+              .++|++++++|+.+++.+++.+
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                   9999999999999999999999998754  3567777              8999999999999999999999


Q ss_pred             HHhhccCC------CCeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          138 ARVMKPAG------RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       138 ~~~~~~~~------~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +|.|.+++      .++||++||..+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            99998877      69999999999999999999999999999999999999999999999999999999998

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.1e-42  Score=269.64  Aligned_cols=194  Identities=28%  Similarity=0.474  Sum_probs=157.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.....   ++.++.+|++|+++++++++++.
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG---TAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---EEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888888887765432   67889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCC-CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDE-AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+|++|+||||||.... ...++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+.   +....|
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y  158 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYY  158 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchh
Confidence            999999999999998531 2234678899999999999999999999999999999888999999998876   456789


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++||++++.|+++++.|++++||+|++|+||+++|++.+..
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  199 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT  199 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc
Confidence            99999999999999999999999999999999999987654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-42  Score=270.50  Aligned_cols=199  Identities=28%  Similarity=0.390  Sum_probs=169.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |++++.+|++|||||++|||+++|++|+++|++|++++|+.+.. +...+.+....   .++.++++|++|+++++++++
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~   77 (264)
T 3i4f_A            1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVE---ERLQFVQADVTKKEDLHKIVE   77 (264)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGG---GGEEEEECCTTSHHHHHHHHH
T ss_pred             CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHH
Confidence            44566789999999999999999999999999999997776443 33333333322   258899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCC-Cc-ccCCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASV-CG-VIGGVT  163 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~-~~~~~~  163 (214)
                      ++.++++++|+||||||.......++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||. .+ ..+.+.
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  157 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIY  157 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTT
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCC
Confidence            9999999999999999954333346788899999999999999999999999999999888999999997 43 456678


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ...|+++|+|++.|+++++.|++++||+||+|+||++.|++....
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  202 (264)
T 3i4f_A          158 RSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT  202 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc
Confidence            889999999999999999999999999999999999999997654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=8e-42  Score=269.56  Aligned_cols=190  Identities=32%  Similarity=0.468  Sum_probs=173.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....   .++.++++|++|+++++++++++.+.+|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999887777777665432   2578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|
T Consensus        79 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T 1geg_A           79 GFDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSK  156 (256)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHH
Confidence            99999999998643  3567889999999999999999999999999998876 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  192 (256)
T 1geg_A          157 FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE  192 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh
Confidence            999999999999999999999999999999998653

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=8e-42  Score=277.68  Aligned_cols=195  Identities=26%  Similarity=0.386  Sum_probs=174.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..... ...+.++.+|++|+++++++++++.+
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-GPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999888888777765432 12578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------CCCeEEEecCCCcccCCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA------GRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~g~iv~~sS~~~~~~~~~  163 (214)
                      .+|++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|.|.++      +.|+||++||.++..+.+.
T Consensus        84 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HTCCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             hCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            99999999999998654  367888999999999999999999999999999764      5789999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ...|++||+|+++|+++++.|+.+.||+|++|+||+|+|++...
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  205 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS  205 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccc
Confidence            99999999999999999999999999999999999999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.1e-41  Score=274.01  Aligned_cols=191  Identities=27%  Similarity=0.369  Sum_probs=170.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.  +..+.+.+.+....   .++.++++|++|++++++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTSHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999998863  33444444444432   3678899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+++|++|+||||||..... .++.+.+.++|++.+++|+.|++.++++++|+|++  +|+||++||..+..+.+....
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~  198 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLD  198 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchH
Confidence            999999999999999986432 35778899999999999999999999999999976  489999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      |++||+|++.|+++++.|++++||+||+|+||+++|++.
T Consensus       199 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  237 (294)
T 3r3s_A          199 YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc
Confidence            999999999999999999999999999999999999984

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.5e-41  Score=273.41  Aligned_cols=194  Identities=22%  Similarity=0.268  Sum_probs=172.2

Q ss_pred             CccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ++++||++|||||+|  |||+++|++|+++|++|++++|+.+..+...+..... +   .+.+++||++|++++++++++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~---~~~~~~~Dv~d~~~v~~~~~~  101 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-G---VKLTVPCDVSDAESVDNMFKV  101 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-T---CCEEEECCTTCHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-C---CeEEEEcCCCCHHHHHHHHHH
Confidence            358899999999997  9999999999999999999999976554444443332 2   357899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           87 AVSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      +.+++|++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+.+
T Consensus       102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~  179 (296)
T 3k31_A          102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHY  179 (296)
T ss_dssp             HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTT
T ss_pred             HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCc
Confidence            999999999999999987431  135678899999999999999999999999999976  6899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++....
T Consensus       180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  223 (296)
T 3k31_A          180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI  223 (296)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc
Confidence            99999999999999999999999999999999999999987543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.3e-41  Score=268.23  Aligned_cols=189  Identities=30%  Similarity=0.489  Sum_probs=171.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||++++++|+++|++|++++|+.+  +...+++....   .++.++.+|++|+++++++++++.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG---VKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS---CCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC---CceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999876  44445554322   25788899999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++
T Consensus        77 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAA  154 (255)
T ss_dssp             HSSCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHH
Confidence            9999999999998643  34677899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |++++.|+++++.|++++||+||+|+||+++|++..
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (255)
T 2q2v_A          155 KHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ  190 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh
Confidence            999999999999999999999999999999999864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-41  Score=266.74  Aligned_cols=187  Identities=34%  Similarity=0.535  Sum_probs=171.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+. ++..+++.       . .++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-------~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-------G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-------C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-------C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998876 55544442       3 6789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||...+  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|++
T Consensus        74 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~  151 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNA  151 (256)
T ss_dssp             HHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHH
Confidence            99999999999998753  3567889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||++++.|+++++.|+++.||+||+|+||+++|++...
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  189 (256)
T 2d1y_A          152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE  189 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh
Confidence            99999999999999999999999999999999998654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-42  Score=272.77  Aligned_cols=197  Identities=28%  Similarity=0.400  Sum_probs=174.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++........++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998888777777654322111578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCC--CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-CCCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAK--PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-VTSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~~~~~  166 (214)
                      ++|++|+||||||...+..  ..+.+.+.++|++.+++|+.+++.+++.++|.|.+++ ++||++||..+..+. +....
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHH
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccH
Confidence            9999999999999864321  0156788999999999999999999999999998766 899999999998887 88899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  202 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNA  202 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccc
Confidence            99999999999999999999999999999999999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.3e-41  Score=271.23  Aligned_cols=192  Identities=24%  Similarity=0.359  Sum_probs=174.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...   . ++.++.+|++|+++++++++++.+
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~-~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---G-DCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS---S-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---C-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988777776666432   1 578889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC----CeEEEecCCCcccCCCCCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR----GSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+|++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.    ++||++||..+..+.+...
T Consensus       102 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~  179 (276)
T 2b4q_A          102 LSARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQA  179 (276)
T ss_dssp             HCSCCSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSC
T ss_pred             hcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCc
Confidence            99999999999998754  35678899999999999999999999999999987665    8999999999998888888


Q ss_pred             -cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 -AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 -~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                       .|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  222 (276)
T 2b4q_A          180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH  222 (276)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh
Confidence             999999999999999999999999999999999999998653

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=8.8e-42  Score=271.28  Aligned_cols=184  Identities=33%  Similarity=0.513  Sum_probs=167.8

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+...             ..+..+++|++|+++++++++++
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------------NVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------------TSSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------------CceeEEEecCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999875431             13577899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.+|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|.+++.|+||++||..+..+.+....|
T Consensus        76 ~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAY  153 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HHHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhH
Confidence            9999999999999998654  35778899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||+|++.|+++++.|+++ ||+||+|+||+++|++...
T Consensus       154 ~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~  192 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIK  192 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhh
Confidence            99999999999999999998 8999999999999998643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=8.1e-42  Score=271.43  Aligned_cols=193  Identities=26%  Similarity=0.417  Sum_probs=172.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|++|||||++|||+++|++|+++|++|++++ ++.+..+...+.+....   .++.++.+|++|+++++++++++.+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG---RDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT---CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999998 44444455444444322   3688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||.....  ++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|++
T Consensus       100 ~~g~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  177 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDA--TFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYAS  177 (269)
T ss_dssp             HHSCCSEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCc--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHH
Confidence            999999999999987543  577889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ||+|++.|+++++.|++++||+||+|+||+++|++.+..
T Consensus       178 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  216 (269)
T 3gk3_A          178 AKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV  216 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh
Confidence            999999999999999999999999999999999997654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.5e-41  Score=271.56  Aligned_cols=190  Identities=31%  Similarity=0.434  Sum_probs=167.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+...      .++.++++|++|+++++++++++.+
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG------GNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB------TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC------CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999877766655431      2678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCC---CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAK---PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      ++|++|+||||||...+..   ....+.+.++|++++++|+.+++.++++++|+|.++ +|+||++||..+..+.+....
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  154 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPL  154 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHH
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCch
Confidence            9999999999999864321   112345567899999999999999999999999876 489999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++||+|+++|+++++.|+++. |+||+|+||+++|++...
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          155 YTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCC
T ss_pred             hHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccc
Confidence            9999999999999999999987 999999999999998653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-41  Score=266.90  Aligned_cols=187  Identities=22%  Similarity=0.260  Sum_probs=170.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ||++|||||++|||+++|++|+++|  +.|++.+|+.+.++++.+++.      .++.++++|++|+++++++++++.++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG------DRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG------GGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC------CceEEEECCCCCHHHHHHHHHHHHHh
Confidence            6999999999999999999999985  679899999887777666552      25788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||...+. .++.+.+.++|++.+++|+.|++.+++.++|+|++++ |+||++||..+..+.+....|++|
T Consensus        76 ~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~as  153 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSS  153 (254)
T ss_dssp             HSCCCEEEEECCCCCCC-TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHH
T ss_pred             cCCccEEEECCcccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHH
Confidence            99999999999986442 3578899999999999999999999999999998875 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |++++.|+++++.|+  .||+||+|+||+++|++...+.
T Consensus       154 K~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~  190 (254)
T 3kzv_A          154 KAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIR  190 (254)
T ss_dssp             HHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCC
T ss_pred             HHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhh
Confidence            999999999999998  6899999999999999987654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.6e-41  Score=275.69  Aligned_cols=194  Identities=26%  Similarity=0.344  Sum_probs=174.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-------hhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-------ESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..       ++..+++....   .++.++.+|++|+++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g---~~~~~~~~Dv~d~~~v~  117 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG---GKALPCIVDVRDEQQIS  117 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT---CEEEEEECCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHH
Confidence            368999999999999999999999999999999999987753       34444444432   36788999999999999


Q ss_pred             HHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-  160 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-  160 (214)
                      ++++++.+++|++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|+|++++.++||++||..+..+ 
T Consensus       118 ~~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~  195 (346)
T 3kvo_A          118 AAVEKAIKKFGGIDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV  195 (346)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC
Confidence            9999999999999999999998754  3578899999999999999999999999999999998899999999999887 


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCc-ccCcccccc
Q 044923          161 -GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYA-VSSPMAKGF  208 (214)
Q Consensus       161 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~-v~t~~~~~~  208 (214)
                       .+.+..|++||++++.|+++++.|++ .||+||+|+||. ++|++.+.+
T Consensus       196 ~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~  244 (346)
T 3kvo_A          196 WFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML  244 (346)
T ss_dssp             GTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh
Confidence             78889999999999999999999999 899999999995 999887644

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=3.4e-41  Score=267.24  Aligned_cols=199  Identities=23%  Similarity=0.279  Sum_probs=174.9

Q ss_pred             CCCccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         7 ~~~~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      |.++++||++|||||+  +|||+++|++|+++|++|++++|+.+..+...+.......  .++.++++|++|++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCCSSSHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCCCCHHHHHHHH
Confidence            4567899999999999  6799999999999999999999986554444444333222  25789999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV  162 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  162 (214)
                      +++.+.+|++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~  156 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMP  156 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCT
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCC
Confidence            99999999999999999987521  235678899999999999999999999999999975  58999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++.....
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          157 NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence            99999999999999999999999999999999999999999877543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.9e-41  Score=270.43  Aligned_cols=193  Identities=33%  Similarity=0.485  Sum_probs=176.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|+++++++++++.+
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999887777777665432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh--hccCCCCeEEEecCCCcccCCCCCccc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.  |.+++.++||++||..+..+.+....|
T Consensus        96 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPY  173 (277)
T ss_dssp             HTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHH
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccH
Confidence            99999999999998643  35678899999999999999999999999999  887777999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|++++.|+++++.|+++.||+||+|+||+++|++...
T Consensus       174 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  213 (277)
T 2rhc_B          174 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS  213 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh
Confidence            9999999999999999999999999999999999998643

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-41  Score=267.00  Aligned_cols=189  Identities=33%  Similarity=0.537  Sum_probs=173.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++    +  .++.++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~~D~~~~~~v~~~~~~~~~   76 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----G--ERSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----C--TTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CceEEEEccCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987776666555    1  2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .+|++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ ++||++||..+..+.+....|++
T Consensus        77 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~  153 (253)
T 1hxh_A           77 RLGTLNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSA  153 (253)
T ss_dssp             HHCSCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHH
Confidence            99999999999998643  3567889999999999999999999999999999887 99999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccC--CcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRF--GIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~--gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||++++.|+++++.|++++  ||+||+|+||++.|++...
T Consensus       154 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~  193 (253)
T 1hxh_A          154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh
Confidence            9999999999999999988  9999999999999998654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.1e-41  Score=270.53  Aligned_cols=193  Identities=25%  Similarity=0.382  Sum_probs=167.9

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCC----HHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTK----EKDIEN   82 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~   82 (214)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+. +.++++.+++....+  .++.++++|++|    ++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHH
Confidence            3468899999999999999999999999999999999998 777777776652222  357889999999    999999


Q ss_pred             HHHHHHHHcCCccEEEeCCcccCCCCCCC-----CC-----CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC------C
Q 044923           83 AVNTAVSQYGKLDIMFNNAGIVDEAKPNI-----LD-----NDQAEFERILSVNLVGAFLGTKHAARVMKPAG------R  146 (214)
Q Consensus        83 ~~~~~~~~~g~id~li~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~  146 (214)
                      +++++.+.+|++|+||||||...+.  ++     .+     .+.++|++.+++|+.+++.+++.++|.|.+++      .
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYPT--PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCC--CSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCC--ccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence            9999999999999999999987542  34     45     78899999999999999999999999998876      7


Q ss_pred             CeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          147 GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       147 g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      |+||++||..+..+.+....|++||++++.|+++++.|++++||+||+|+||++.|++
T Consensus       174 g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          174 LSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             EEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             eEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            8999999999999999999999999999999999999999999999999999999998

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-41  Score=269.68  Aligned_cols=195  Identities=29%  Similarity=0.427  Sum_probs=166.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++........++.++++|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999998877777666632111123578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCC----CHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc-ccCCCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDN----DQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG-VIGGVTS  164 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~~~  164 (214)
                      ++|++|+||||||...+  .++.+.    +.++|++.+++|+.|++.+++.++|.|++++ |+||++||..+ ..+.+..
T Consensus        83 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~  159 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF  159 (278)
T ss_dssp             HHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred             HcCCCCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence            99999999999998643  245666    8999999999999999999999999998765 89999999998 8888899


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|+++|++++.|+++++.|++++||+||+|+||++.|++...
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence            9999999999999999999999999999999999999998654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.7e-41  Score=271.55  Aligned_cols=193  Identities=25%  Similarity=0.324  Sum_probs=165.9

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+++..+... ++....+   ++.+++||++|+++++++++++
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVE-PLAEELG---AFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHH-HHHHHHT---CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHHHhcC---CceEEECCCCCHHHHHHHHHHH
Confidence            5899999999999  55999999999999999999999854333333 3322222   4788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+++|++|+||||||...+  ...++.+.+.++|++.+++|+.+++.++++++|+|++  .|+||++||..+..+.+.+.
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~  181 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYN  181 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTT
T ss_pred             HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchH
Confidence            9999999999999998742  0235678899999999999999999999999999976  58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .|++||+|++.|+++++.|++++||+||+|+||+++|++....
T Consensus       182 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  224 (293)
T 3grk_A          182 VMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI  224 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc
Confidence            9999999999999999999999999999999999999987654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-41  Score=266.98  Aligned_cols=195  Identities=26%  Similarity=0.369  Sum_probs=169.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .++.++++|++|+++++++++++.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999887777777665432   2578899999999999999999988


Q ss_pred             H-cCCccEEEeCCc--ccC---CCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           90 Q-YGKLDIMFNNAG--IVD---EAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        90 ~-~g~id~li~~ag--~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      . +|++|+||||||  ...   ....++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+. .
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~  157 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-F  157 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-S
T ss_pred             hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-C
Confidence            7 899999999995  320   01235677888999999999999999999999999998888999999999887654 4


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..+|++||++++.|+++++.|++++||+||+|+||+++|++....
T Consensus       158 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  202 (260)
T 2qq5_A          158 NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH  202 (260)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---
T ss_pred             CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh
Confidence            579999999999999999999999999999999999999997653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-41  Score=267.22  Aligned_cols=184  Identities=28%  Similarity=0.419  Sum_probs=166.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+..+.            .++.++++|++|+++++++++++.+
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------------PDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------------TTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998754322            1578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC--CCCCccc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--GVTSHAY  167 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~y  167 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.|++.++++++|.|++++.|+||++||..+..+  .+....|
T Consensus        93 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y  170 (260)
T 3un1_A           93 RFGRIDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALA  170 (260)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHH
T ss_pred             HCCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHH
Confidence            99999999999998754  3577889999999999999999999999999999998999999999887754  3455799


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||+|++.|+++++.|++++||+||+|+||+++|++...
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence            9999999999999999999999999999999999998653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-41  Score=272.50  Aligned_cols=189  Identities=28%  Similarity=0.392  Sum_probs=166.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC------------CcchhhHHHHhhccCCCCCCceEEEeeCCCH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK------------DDLGESVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+            .+.+++...++....   .++.++++|++|+
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~   83 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVRDR   83 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTTCH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCCCH
Confidence            5899999999999999999999999999999999987            334444444444332   3688999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      ++++++++++.+++|++|+||||||.....    .+.+.++|++.+++|+.|++.+++.++|+|.  +.++||++||..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~  157 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLG----AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC----TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCccc----CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchh
Confidence            999999999999999999999999987543    2378899999999999999999999999994  3588999999988


Q ss_pred             ccCC-----------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          158 VIGG-----------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       158 ~~~~-----------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..+.           +....|+++|++++.|+++++.|++++||+||+|+||+++|++.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          158 LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred             cccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence            8765           6678999999999999999999999999999999999999999753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=9e-42  Score=268.21  Aligned_cols=186  Identities=22%  Similarity=0.333  Sum_probs=166.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++.++++|++|+++++++++++.+.+|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG------DNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999877776666553      25788999999999999999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|+||||||.... ..++.+.+.++|++.+++|+.|++.+++.++|+|++++.|+||++||..+..+.+....|++||++
T Consensus        75 iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  153 (248)
T 3asu_A           75 IDILVNNAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAF  153 (248)
T ss_dssp             CCEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHH
Confidence            9999999998632 235678899999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCccc-Ccccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVS-SPMAK  206 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~-t~~~~  206 (214)
                      ++.|+++++.|++++||+||+|+||+++ |++..
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             HHHHHHHHHHHTTTSCCEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeccccccCcchh
Confidence            9999999999999999999999999999 99864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.7e-41  Score=269.02  Aligned_cols=189  Identities=22%  Similarity=0.340  Sum_probs=173.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+...      .++.++++|++|+++++++++++.++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP------DRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT------TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc------CCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999999999887776655432      25789999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|++++.++||++||..+..+.+...+|++|
T Consensus        77 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSAT  154 (281)
T ss_dssp             HSCCSEEEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHH
Confidence            9999999999998754  35678899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++++.|+++++.|++++||+|++|+||++.|++...
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          155 KAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence            9999999999999999999999999999999998653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9.9e-42  Score=277.49  Aligned_cols=195  Identities=31%  Similarity=0.556  Sum_probs=175.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC----------CcchhhHHHHhhccCCCCCCceEEEeeCCCHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK----------DDLGESVCEDISSSSSSANGCSYVHCDVTKEK   78 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~----------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   78 (214)
                      ..++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++....   .++.++++|++|++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG---GEAVADGSNVADWD   99 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT---CEEEEECCCTTSHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC---CcEEEEECCCCCHH
Confidence            35899999999999999999999999999999999987          566666666665543   26788999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC------CCeEEEe
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG------RGSIIST  152 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~g~iv~~  152 (214)
                      +++++++++.+++|++|+||||||...+  .++.+.+.++|++++++|+.|++.+++.+.|+|.+.+      .|+||++
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence            9999999999999999999999998754  3578889999999999999999999999999987532      3799999


Q ss_pred             cCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          153 ASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       153 sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ||..+..+.+....|++||+|++.|+++++.|++++||+||+|+|| +.|++....+
T Consensus       178 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~  233 (322)
T 3qlj_A          178 SSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF  233 (322)
T ss_dssp             CCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC
T ss_pred             cCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh
Confidence            9999999999999999999999999999999999999999999999 9999987654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.7e-41  Score=265.22  Aligned_cols=190  Identities=33%  Similarity=0.496  Sum_probs=172.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..      ++.++++|++|+++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN------GGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT------CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCeEEEEeCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999988766655544422      46789999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +++|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .++||++||..+..+.+....|
T Consensus        82 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (263)
T 3ak4_A           82 DALGGFDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHY  159 (263)
T ss_dssp             HHHTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhH
Confidence            999999999999998643  3567889999999999999999999999999998876 7999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++|++++.|+++++.|+++.||+||+|+||+++|++..
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  198 (263)
T 3ak4_A          160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE  198 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh
Confidence            999999999999999999999999999999999999864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.1e-42  Score=270.41  Aligned_cols=191  Identities=32%  Similarity=0.489  Sum_probs=159.7

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+   +..+++      ..++.++++|++|+++++++++.+
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~   74 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADL------GDRARFAAADVTDEAAVASALDLA   74 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHT------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhc------CCceEEEECCCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999998543   222322      125789999999999999999988


Q ss_pred             HHHcCCccEEEeCCcccCCCC--CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--------CCCCeEEEecCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAK--PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP--------AGRGSIISTASVCG  157 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~g~iv~~sS~~~  157 (214)
                      .+ +|++|+||||||...+..  .+..+.+.++|++++++|+.+++.++++++|+|.+        ++.|+||++||..+
T Consensus        75 ~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tl3_A           75 ET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA  153 (257)
T ss_dssp             HH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC-
T ss_pred             HH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh
Confidence            77 999999999999864211  11235789999999999999999999999999988        56789999999999


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          158 VIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       158 ~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..+.+.+..|++||+|++.|+++++.|++++||+||+|+||+++|++...+
T Consensus       154 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  204 (257)
T 3tl3_A          154 FDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL  204 (257)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence            999999999999999999999999999999999999999999999997653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1e-41  Score=270.54  Aligned_cols=183  Identities=29%  Similarity=0.432  Sum_probs=167.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..+.              ...+++|++|.++++++++++.
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~--------------~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA--------------DLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC--------------SEECCCCTTSHHHHHHHHHHHH
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh--------------hhccCcCCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999997654322              1234789999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||...+  .++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||..+..+.+...+|+
T Consensus        90 ~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  167 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYC  167 (266)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHH
Confidence            999999999999998764  357788999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|++.|+++++.|++++||+||+|+||+++|++.+.
T Consensus       168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  206 (266)
T 3uxy_A          168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRT  206 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhh
Confidence            999999999999999999999999999999999998654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.4e-41  Score=270.52  Aligned_cols=193  Identities=22%  Similarity=0.323  Sum_probs=169.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++ |++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...    .++.++++|++|+++++++++++.
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK----TRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT----SCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3466 99999999999999999999999999999999988777776666432    257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCC-eEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+|++|+||||||.... ..++.+.+.++|++++++|+.|++.+++.++|.|++++.| +||++||..+..+.+....|
T Consensus        93 ~~~g~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y  171 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVY  171 (272)
T ss_dssp             GGGSSCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchH
Confidence            999999999999998643 1356788999999999999999999999999999887778 99999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|++++.|+++++.|+++.||+||+|+||+++|++...
T Consensus       172 ~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  211 (272)
T 2nwq_A          172 GGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV  211 (272)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence            9999999999999999999999999999999999998653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-41  Score=266.86  Aligned_cols=187  Identities=34%  Similarity=0.552  Sum_probs=167.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~   76 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPKAVEAVFAEALE   76 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877666655442      2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|+| ++ .|+||++||..+. +.+....|++
T Consensus        77 ~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~a  151 (263)
T 2a4k_A           77 EFGRLHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAA  151 (263)
T ss_dssp             HHSCCCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHH
T ss_pred             HcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHH
Confidence            99999999999998643  356788999999999999999999999999999 54 7899999999998 7788889999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  189 (263)
T 2a4k_A          152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG  189 (263)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence            99999999999999999999999999999999998754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.8e-41  Score=265.47  Aligned_cols=195  Identities=17%  Similarity=0.251  Sum_probs=172.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHH---cCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSK---HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~---~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ++++|++|||||++|||+++|++|++   +|++|++++|+.+.++++.+++..... ..++.++++|++|++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP-DLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT-TSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC-CCeEEEEecCCCCHHHHHHHHHH
Confidence            57899999999999999999999999   899999999998888777777654321 12578899999999999999999


Q ss_pred             HHH--HcCCcc--EEEeCCcccCCCCCCCCC-CCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCCeEEEecCCCccc
Q 044923           87 AVS--QYGKLD--IMFNNAGIVDEAKPNILD-NDQAEFERILSVNLVGAFLGTKHAARVMKPA--GRGSIISTASVCGVI  159 (214)
Q Consensus        87 ~~~--~~g~id--~li~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~~sS~~~~~  159 (214)
                      +.+  .+|++|  +||||||...+...++.+ .+.++|++++++|+.|++.+++.++|.|.++  +.|+||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            998  778899  999999986432234566 6899999999999999999999999999887  678999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +.+....|++||++++.|+++++.|+++  |+||+|+||+++|++...
T Consensus       162 ~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~  207 (259)
T 1oaa_A          162 PYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHH
Confidence            9999999999999999999999999964  999999999999998654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-41  Score=267.86  Aligned_cols=190  Identities=31%  Similarity=0.603  Sum_probs=171.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.       .+.++++|++|+++++++++++.
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------CCeEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998876665555432       36789999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.++|+|+++ .++||++||..+..+.+....|+
T Consensus        78 ~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  155 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYV  155 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccH
Confidence            9999999999999986432 356788999999999999999999999999999765 58999999999998999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~  194 (270)
T 1yde_A          156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  194 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhh
Confidence            999999999999999999999999999999999998654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-41  Score=271.90  Aligned_cols=196  Identities=23%  Similarity=0.334  Sum_probs=171.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+  .++.++.+|++|+ ++++++++++.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH--ENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEccCCCcHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888888888766533  3688999999998 99999999999


Q ss_pred             HHcCCccEEEeCCcccCCC----------------------------CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh
Q 044923           89 SQYGKLDIMFNNAGIVDEA----------------------------KPNILDNDQAEFERILSVNLVGAFLGTKHAARV  140 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  140 (214)
                      +.+|++|+||||||.....                            ..++.+.+.++|++.+++|+.|++.+++.++|+
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence            9999999999999986421                            113456788999999999999999999999999


Q ss_pred             hccCCCCeEEEecCCCcccCC-------------------------------------------CCCccchhhHHHHHHH
Q 044923          141 MKPAGRGSIISTASVCGVIGG-------------------------------------------VTSHAYTSSKHGVVGL  177 (214)
Q Consensus       141 ~~~~~~g~iv~~sS~~~~~~~-------------------------------------------~~~~~y~~sK~a~~~l  177 (214)
                      |++++.++||++||..+..+.                                           +....|++||+|++.|
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            999888999999999887653                                           3557899999999999


Q ss_pred             HHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       178 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++.++.|+.+  |+||+|+||+|+|++.+...
T Consensus       247 ~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~  276 (311)
T 3o26_A          247 TRVLANKIPK--FQVNCVCPGLVKTEMNYGIG  276 (311)
T ss_dssp             HHHHHHHCTT--SEEEEECCCSBCSGGGTTCC
T ss_pred             HHHHHhhcCC--ceEEEecCCceecCCcCCCC
Confidence            9999999864  99999999999999987653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=7.5e-41  Score=266.63  Aligned_cols=190  Identities=23%  Similarity=0.329  Sum_probs=164.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCH----HHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKE----KDIENA   83 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~----~~~~~~   83 (214)
                      .++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++....+  .++.++++|++|+    ++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~   84 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDLSLSSSLLDCCEDI   84 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSTTHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC--CceEEEeccCCCccccHHHHHHH
Confidence            3478999999999999999999999999999999999 87777777776654312  2578899999999    999999


Q ss_pred             HHHHHHHcCCccEEEeCCcccCCCCCCCCCCCH-----------HHHHHHHhhhhhHHHHHHHHHHHhhccCCC------
Q 044923           84 VNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQ-----------AEFERILSVNLVGAFLGTKHAARVMKPAGR------  146 (214)
Q Consensus        84 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------  146 (214)
                      ++++.+.+|++|+||||||...+  .++.+.+.           ++|++++++|+.+++.+++.++|.|. ++.      
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~  161 (276)
T 1mxh_A           85 IDCSFRAFGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRN  161 (276)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCC
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCC
Confidence            99999999999999999998753  34667777           99999999999999999999999998 555      


Q ss_pred             CeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          147 GSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       147 g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ++||++||..+..+.+....|++||++++.|+++++.|++++||+||+|+||++.|+
T Consensus       162 g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          162 LSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             EEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             cEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            899999999999999999999999999999999999999999999999999999998

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=6.6e-41  Score=261.00  Aligned_cols=192  Identities=23%  Similarity=0.305  Sum_probs=171.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++....+  .++.++++|++|+++++++++++.+.+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999999999999999888888777753322  368899999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      |++|+||||||...+  .++.+.+.++|++.+++|+.|++.+++.++|+|+ ++.+++|+++|..+..+.+....|+++|
T Consensus        79 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  155 (235)
T 3l77_A           79 GDVDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSARLIPYGGGYVSTK  155 (235)
T ss_dssp             SSCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGSSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhcccCCCcchHHHHH
Confidence            999999999998753  3678889999999999999999999999999994 4468899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +++++|+++++.  ...||+||+|+||+++|++......
T Consensus       156 aa~~~~~~~l~~--~~~~i~v~~v~PG~v~T~~~~~~~~  192 (235)
T 3l77_A          156 WAARALVRTFQI--ENPDVRFFELRPGAVDTYFGGSKPG  192 (235)
T ss_dssp             HHHHHHHHHHHH--HCTTSEEEEEEECSBSSSTTTCCSC
T ss_pred             HHHHHHHHHHhh--cCCCeEEEEEeCCccccccccccCC
Confidence            999999999944  4779999999999999999876543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=7e-41  Score=272.58  Aligned_cols=191  Identities=19%  Similarity=0.247  Sum_probs=162.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-----cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-----DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-----~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .+++|++|||||++|||+++|++|+++|++|+++.|+.     +.++.+.+.+....   .++.++.+|++|++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND---VDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT---CCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC---CcEEEEEeecCCHHHHHHHH
Confidence            35789999999999999999999999999999888763     33344444433322   35889999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-CCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-GGVT  163 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~~~  163 (214)
                      +++.+++|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++.. +.+.
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~  156 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPY  156 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSS
T ss_pred             HHHHHHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCc
Confidence            9999999999999999998753  357888999999999999999999999999999998889999999999884 4567


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ...|++||+|+++|+++++.|+++.||+|++|+||++.|++.
T Consensus       157 ~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          157 LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            789999999999999999999999999999999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.3e-40  Score=260.41  Aligned_cols=183  Identities=24%  Similarity=0.310  Sum_probs=162.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.        ..     ..+.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-----~~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-----YPFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-----CSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-----CCceEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998652        11     1267889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++
T Consensus        71 ~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~  148 (250)
T 2fwm_X           71 ETERLDALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGA  148 (250)
T ss_dssp             HCSCCCEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHH
Confidence            99999999999998653  3567889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence            99999999999999999999999999999999998654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-40  Score=271.86  Aligned_cols=190  Identities=22%  Similarity=0.264  Sum_probs=171.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-----------
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-----------   78 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-----------   78 (214)
                      +++|++|||||++|||+++|++|+++|++|++++ |+.+.++++.+++....+  .++.++++|++|++           
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSCBCC-------C
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCCCchhcccccccccc
Confidence            7899999999999999999999999999999999 988877777777652222  35788999999999           


Q ss_pred             ------HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCC--------------HHHHHHHHhhhhhHHHHHHHHHH
Q 044923           79 ------DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDND--------------QAEFERILSVNLVGAFLGTKHAA  138 (214)
Q Consensus        79 ------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~  138 (214)
                            +++++++++.+.+|++|+||||||....  .++.+.+              .++|++.+++|+.+++.+++.++
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  199 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  199 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  9999999999999999999999998753  3466777              89999999999999999999999


Q ss_pred             HhhccCC------CCeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          139 RVMKPAG------RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       139 ~~~~~~~------~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      |.|.+++      .++||++||..+..+.++...|+++|++++.|++.++.|+++.||+||+|+||+++|++
T Consensus       200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          200 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             HHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            9998876      78999999999999999999999999999999999999999999999999999999998

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=9.2e-41  Score=262.29  Aligned_cols=184  Identities=27%  Similarity=0.460  Sum_probs=160.8

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++++              ..+.+|++|+++++++++++
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------------~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL--------------FGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS--------------EEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh--------------cCeeccCCCHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999987654321              13789999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+.+|++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++++.++||++||..+..+.+....|
T Consensus        76 ~~~~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANY  153 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhH
Confidence            9999999999999998643  35678899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++|++++.|++.++.|++++||+||+|+||+++|++...
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence            9999999999999999999999999999999999998653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.5e-40  Score=263.71  Aligned_cols=194  Identities=28%  Similarity=0.451  Sum_probs=173.5

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+.. ++..+++....+  .++.++++|++|++++++++++
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG--IKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC--CCEECCBCCTTCHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC--CceeEEecCCCCHHHHHHHHHH
Confidence            5789999999999  9999999999999999999998877655 555565554322  3688899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC--CCC
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--VTS  164 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~~  164 (214)
                      +.+++|++|+||||||...+.  ++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.  +..
T Consensus        95 ~~~~~g~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  172 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATADS--GILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQ  172 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCCS--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCC
T ss_pred             HHHHcCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCC
Confidence            999999999999999987543  4788899999999999999999999999999998888999999999988765  577


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|++||++++.|+++++.|+++. |+||+|+||+++|++.+..
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS
T ss_pred             CcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC
Confidence            899999999999999999999887 9999999999999987643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-40  Score=264.43  Aligned_cols=196  Identities=21%  Similarity=0.353  Sum_probs=172.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      +..++.+|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++....   .++.++.+|++|+++++++++
T Consensus        20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~   96 (267)
T 4iiu_A           20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG---GNGRLLSFDVANREQCREVLE   96 (267)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHH
T ss_pred             hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHH
Confidence            3446789999999999999999999999999998665 466666666666665543   268899999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhc-cCCCCeEEEecCCCcccCCCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMK-PAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      ++.+.++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.+++.|. +++.++||++||..+..+.++.
T Consensus        97 ~~~~~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  174 (267)
T 4iiu_A           97 HEIAQHGAWYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ  174 (267)
T ss_dssp             HHHHHHCCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHhCCccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC
Confidence            999999999999999998754  3567889999999999999999999999988886 5667999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|++||+|++.|+++++.|++++||+|++|+||+++|++...
T Consensus       175 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  217 (267)
T 4iiu_A          175 VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEM  217 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccc
Confidence            9999999999999999999999999999999999999998753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3e-40  Score=264.18  Aligned_cols=191  Identities=28%  Similarity=0.450  Sum_probs=169.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+. .+...+++....   .++.++.+|++|+++++++++++.
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC---CCeEEEEcCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998654 344445554432   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-Cccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-SHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-~~~y  167 (214)
                      +.+|++|+||||||....  .++.+.+.++|++.+++|+.|++.++++++|+|+  +.|+||++||..+..+.+. ...|
T Consensus       103 ~~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y  178 (283)
T 1g0o_A          103 KIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVY  178 (283)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcch
Confidence            999999999999998743  3567889999999999999999999999999993  4689999999999887764 8899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       179 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  218 (283)
T 1g0o_A          179 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  218 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhh
Confidence            9999999999999999999999999999999999998654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.4e-40  Score=259.90  Aligned_cols=181  Identities=31%  Similarity=0.518  Sum_probs=167.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.              ..++.++++|++|+++++++++++.+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998654              12578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|++
T Consensus        71 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  148 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVT  148 (264)
T ss_dssp             HHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHH
Confidence            99999999999998653  3567889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||++++.|+++++.|+++. |+||+|+||+++|++...
T Consensus       149 sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~  185 (264)
T 2dtx_A          149 SKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRK  185 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhh
Confidence            9999999999999999998 999999999999998653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=4e-40  Score=263.09  Aligned_cols=194  Identities=20%  Similarity=0.256  Sum_probs=171.4

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++....+   ++.++++|++|+++++++++++
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN---PAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC---CSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC---CceEEEeecCCHHHHHHHHHHH
Confidence            4789999999988  7899999999999999999999987  3344444443332   4788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCC-CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILD-NDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      .+.++++|+||||||.....  ..++.+ .+.++|++.+++|+.+++.+++.++|+|.++ .++||++||..+..+.+..
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTT
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCc
Confidence            99999999999999987531  123344 7899999999999999999999999999876 6899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ..|++||+|++.|+++++.|++++||+||+|+||+++|++.....
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc
Confidence            999999999999999999999999999999999999999976543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=6.6e-41  Score=264.01  Aligned_cols=183  Identities=31%  Similarity=0.508  Sum_probs=160.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.++              .+.++++|++|+++++++++++.
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~Dl~d~~~v~~~~~~~~   82 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------------GFLAVKCDITDTEQVEQAYKEIE   82 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------------cceEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999875432              25778999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..+.+....|+
T Consensus        83 ~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (253)
T 2nm0_A           83 ETHGPVEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYA  160 (253)
T ss_dssp             HHTCSCSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHH
Confidence            999999999999998643  356778889999999999999999999999999887789999999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|++.++.|+++.||+||+|+||+++|++...
T Consensus       161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  199 (253)
T 2nm0_A          161 ASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV  199 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence            999999999999999999999999999999999998654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-40  Score=261.88  Aligned_cols=195  Identities=19%  Similarity=0.249  Sum_probs=166.6

Q ss_pred             CCccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         8 ~~~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ..++++|++|||||+  +|||+++|++|+++|++|++++|+....+. .+++....+   .+.+++||++|+++++++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFG---SELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTT---CCCEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcC---CcEEEECCCCCHHHHHHHHH
Confidence            456899999999999  999999999999999999999998544333 333333322   47889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCC--CCCCCC-CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEA--KPNILD-NDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV  162 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  162 (214)
                      ++.+++|++|+||||||...+.  ..++.+ .+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~  162 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIP  162 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCT
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCC
Confidence            9999999999999999987531  023455 899999999999999999999999999985  57899999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ....|++||+|++.|+++++.|++++||+||+|+||+++|++...+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  208 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI  208 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc
Confidence            9999999999999999999999999999999999999999987653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=6e-40  Score=262.69  Aligned_cols=193  Identities=22%  Similarity=0.298  Sum_probs=169.3

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+   .+.++++|++|+++++++++++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~   93 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG---SDLVVKCDVSLDEDIKNLKKFL   93 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999875 4444444443322   3678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+.+|++|+||||||...+.  ..++.+.+.++|++.+++|+.|++.+++.++|.|.++ .|+||++||..+..+.+.+.
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  172 (285)
T 2p91_A           94 EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYN  172 (285)
T ss_dssp             HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTT
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCcc
Confidence            99999999999999986431  1346678999999999999999999999999999865 58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       173 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  214 (285)
T 2p91_A          173 VMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS  214 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc
Confidence            999999999999999999999999999999999999998654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.1e-40  Score=263.11  Aligned_cols=192  Identities=19%  Similarity=0.264  Sum_probs=170.2

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+   .+.++++|++|+++++++++++
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999876 4444455443322   3678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+.+|++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+...
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  156 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYN  156 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCch
Confidence            99999999999999986431  134668899999999999999999999999999975  48999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++.+.
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  198 (275)
T 2pd4_A          157 VMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG  198 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh
Confidence            999999999999999999999999999999999999998754

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=4.6e-40  Score=262.76  Aligned_cols=193  Identities=28%  Similarity=0.516  Sum_probs=171.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.      .++.++++|++|+++++++++++ 
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~-   98 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG------NRAEFVSTNVTSEDSVLAAIEAA-   98 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHH-
Confidence            46899999999999999999999999999999999999888877777662      25889999999999999999999 


Q ss_pred             HHcCCccEEEeC-CcccCCCCC---CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc------CCCCeEEEecCCCcc
Q 044923           89 SQYGKLDIMFNN-AGIVDEAKP---NILDNDQAEFERILSVNLVGAFLGTKHAARVMKP------AGRGSIISTASVCGV  158 (214)
Q Consensus        89 ~~~g~id~li~~-ag~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~g~iv~~sS~~~~  158 (214)
                      ++++++|++||| ||.......   ...+.+.++|++.+++|+.+++.+++.++|.+.+      ++.|+||++||..+.
T Consensus        99 ~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  178 (281)
T 3ppi_A           99 NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY  178 (281)
T ss_dssp             TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred             HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence            888999999999 554332210   1136789999999999999999999999999976      567899999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+.+....|++||+|++.|+++++.|+++.||+|++|+||+++|++.+.+
T Consensus       179 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          179 EGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred             CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence            99999999999999999999999999999999999999999999987653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=6.7e-40  Score=258.91  Aligned_cols=194  Identities=33%  Similarity=0.506  Sum_probs=174.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++....   .++.++.+|++|+++++++++++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~   79 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG---GEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999 7666666666665432   25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      .+.++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....
T Consensus        80 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  157 (261)
T 1gee_A           80 IKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH  157 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccH
Confidence            9999999999999998743  3467788999999999999999999999999998876 789999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|++++.|++.++.|++++||+|++|+||++.|++...
T Consensus       158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  198 (261)
T 1gee_A          158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh
Confidence            99999999999999999999999999999999999998654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.5e-40  Score=262.36  Aligned_cols=193  Identities=28%  Similarity=0.437  Sum_probs=167.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+..+.+.+.+....   .++.++.+|++|+++++++++++.+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~  100 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG---GEAVAIPGDVGNAADIAAMFSAVDR  100 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            457999999999999999999999999999877 677777777777665543   2688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC---CCCeEEEecCCCcccCCC-CCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA---GRGSIISTASVCGVIGGV-TSH  165 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~~-~~~  165 (214)
                      .+|++|+||||||..... .++.+.+.++|++.+++|+.|++.+++.++|.|.+.   +.|+||++||..+..+.+ .+.
T Consensus       101 ~~g~id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  179 (272)
T 4e3z_A          101 QFGRLDGLVNNAGIVDYP-QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYV  179 (272)
T ss_dssp             HHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCH
T ss_pred             hCCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcc
Confidence            999999999999987542 357788999999999999999999999999999873   468999999999988776 677


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||++++.|+++++.|++++||+|++|+||+++|++...
T Consensus       180 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          180 DYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence            899999999999999999999999999999999999998654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.5e-40  Score=261.79  Aligned_cols=192  Identities=20%  Similarity=0.288  Sum_probs=168.7

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+   .+.++++|++|+++++++++++
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG---GALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT---CCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC---CcEEEECCCCCHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999875 3334444433222   3678999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+.+|++|+||||||...+.  ..++.+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..+.+...
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~  158 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYN  158 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCch
Confidence            99999999999999986420  124667899999999999999999999999999975  48999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  200 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS  200 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh
Confidence            999999999999999999999999999999999999998654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.7e-41  Score=274.89  Aligned_cols=196  Identities=21%  Similarity=0.239  Sum_probs=167.9

Q ss_pred             CCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCC---------cchhhHHHHhhccCCCCCCceEEEeeCCCH--H
Q 044923           12 QGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKD---------DLGESVCEDISSSSSSANGCSYVHCDVTKE--K   78 (214)
Q Consensus        12 ~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~--~   78 (214)
                      ++|++|||||++  |||+++|++|+++|++|+++++++         ++++...+...........+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999766543         333333333322222223467888899888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh
Q 044923           79 ------------------DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARV  140 (214)
Q Consensus        79 ------------------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  140 (214)
                                        +++++++++.+++|++|+||||||+......++.+.+.++|++++++|+.|++.+++.++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999975433356788999999999999999999999999999


Q ss_pred             hccCCCCeEEEecCCCcccCCCCCc-cchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCccccccC
Q 044923          141 MKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       141 ~~~~~~g~iv~~sS~~~~~~~~~~~-~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |+++  |+||++||..+..+.+... +|++||+|+.+|+++++.|+++ +||+||+|+||+|+|+|.+.+.
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~  229 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhh
Confidence            9886  8999999999999999986 9999999999999999999998 8999999999999999988764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=3e-40  Score=261.83  Aligned_cols=192  Identities=18%  Similarity=0.230  Sum_probs=168.4

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+. ..++..+++....+   ...++++|++|+++++++++++
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAEL   81 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHH
Confidence            3789999999999  9999999999999999999999987 44444454443322   2378899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCC-CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILD-NDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      .+++|++|+||||||...+.  ..++.+ .+.++|++.+++|+.+++.++++++|+|.+  .|+||++||..+..+.+.+
T Consensus        82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  159 (265)
T 1qsg_A           82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNY  159 (265)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTT
T ss_pred             HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCc
Confidence            99999999999999986421  124556 789999999999999999999999999975  4799999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  202 (265)
T 1qsg_A          160 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG  202 (265)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc
Confidence            9999999999999999999999999999999999999998654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.6e-39  Score=257.60  Aligned_cols=198  Identities=53%  Similarity=0.894  Sum_probs=176.9

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...    .++.++.+|++|+++++++++++
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   86 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----DVISFVHCDVTKDEDVRNLVDTT   86 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC----CceEEEECCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999877666555555321    25789999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-CCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~  166 (214)
                      .+.++++|+||||||.......++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+ ....
T Consensus        87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  166 (278)
T 2bgk_A           87 IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHV  166 (278)
T ss_dssp             HHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHH
T ss_pred             HHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcc
Confidence            999999999999999875433467788999999999999999999999999999988889999999999988887 7889


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |+++|++++.|++.++.|++++||++++|+||++.|++.....
T Consensus       167 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (278)
T 2bgk_A          167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF  209 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc
Confidence            9999999999999999999999999999999999999876543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.3e-40  Score=262.12  Aligned_cols=189  Identities=19%  Similarity=0.257  Sum_probs=165.7

Q ss_pred             ccCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCCcc-hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           10 RLQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        10 ~~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|+.+. ++++.+++    +  .++.++++|++|++++++++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~--~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----P--AKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----S--SCCCEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc----C--CCceEEEccCCCHHHHHHHHHH
Confidence            478999999999  9999999999999999999999998754 23333322    1  2567899999999999999999


Q ss_pred             HHHHcC---CccEEEeCCcccCCC---CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           87 AVSQYG---KLDIMFNNAGIVDEA---KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        87 ~~~~~g---~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      +.+++|   ++|+||||||...+.   ..++.+.+.++|++.+++|+.+++.+++.++|+|++.  |+||++||..+ .+
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~  154 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RA  154 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SC
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cc
Confidence            999999   999999999986421   2356788999999999999999999999999999764  79999999876 67


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+.+..|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  201 (269)
T 2h7i_A          155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA  201 (269)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHH
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhc
Confidence            78889999999999999999999999999999999999999998653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.7e-39  Score=256.96  Aligned_cols=191  Identities=35%  Similarity=0.570  Sum_probs=170.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++.
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG------NNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC------CceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888777666551      257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCC------CCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------CCCeEEEecCCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNIL------DNDQAEFERILSVNLVGAFLGTKHAARVMKPA------GRGSIISTASVC  156 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~g~iv~~sS~~  156 (214)
                      ++++++|+||||||.....  ++.      +.+.++|++.+++|+.+++.+++.+.|.|.++      +.++||++||..
T Consensus        82 ~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~  159 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAVAS--KTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA  159 (265)
T ss_dssp             HHHSCCCEEEECCCCCCCC--CSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             HHCCCCCEEEECCccCCCC--ccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChh
Confidence            9999999999999986543  222      36889999999999999999999999999887      678999999999


Q ss_pred             cccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          157 GVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       157 ~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +..+.+....|+++|++++.|++.++.|++++||+|++|+||+++|++...
T Consensus       160 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          160 AFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence            999999999999999999999999999999999999999999999998654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.1e-40  Score=259.44  Aligned_cols=199  Identities=30%  Similarity=0.528  Sum_probs=172.8

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCC----CCCCceEEEeeCCCHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS----SANGCSYVHCDVTKEKDIEN   82 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~~~~   82 (214)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.....    ...++.++.+|++|++++++
T Consensus         1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            44568899999999999999999999999999999999998777666655543220    01257889999999999999


Q ss_pred             HHHHHHHHcCCc-cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccC
Q 044923           83 AVNTAVSQYGKL-DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIG  160 (214)
Q Consensus        83 ~~~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~  160 (214)
                      +++++.+.+|++ |+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .++||++||..+..+
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence            999999999999 999999998753  3467789999999999999999999999999998776 689999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+....|+++|++++.|++.++.|++++||++++|+||++.|++...
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence            99999999999999999999999999999999999999999998654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-39  Score=255.35  Aligned_cols=192  Identities=23%  Similarity=0.329  Sum_probs=174.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-------KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.++.+.+++....   .++.++.+|++|++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~   77 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG---ALTDTITADISDMADVRRLT   77 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT---CEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC---CeeeEEEecCCCHHHHHHHH
Confidence            378999999999999999999999999       99999999877777766665432   35788999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      +++.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|.+++.++||++||..+..+.+..
T Consensus        78 ~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  155 (244)
T 2bd0_A           78 THIVERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHS  155 (244)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCC
Confidence            9999999999999999998643  35677899999999999999999999999999988778999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|+++|++++.|+++++.|+++.||++++|+||++.|++....
T Consensus       156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          156 SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc
Confidence            99999999999999999999999999999999999999997653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.3e-39  Score=254.38  Aligned_cols=192  Identities=32%  Similarity=0.547  Sum_probs=174.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...    .++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc----CceEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987776666555432    3578999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..+.+....|+
T Consensus        79 ~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  156 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN  156 (251)
T ss_dssp             HHSSCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccch
Confidence            99999999999998643  35678899999999999999999999999999998876 8999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|++.++.|+.  +.||++++|+||++.|++...
T Consensus       157 ~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~  197 (251)
T 1zk4_A          157 ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD  197 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh
Confidence            999999999999999988  889999999999999998764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4.2e-40  Score=259.26  Aligned_cols=192  Identities=28%  Similarity=0.370  Sum_probs=171.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++....   .++.++.+|++|.++++++++++.+
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG---GSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC---CceEEEecCcCCHHHHHHHHHHHHH
Confidence            789999999999999999999999999998885 667777777777766543   2578899999999999999999988


Q ss_pred             HcC------CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC
Q 044923           90 QYG------KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT  163 (214)
Q Consensus        90 ~~g------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~  163 (214)
                      .++      ++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.+.
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~  157 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPD  157 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTT
T ss_pred             HhcccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCC
Confidence            764      49999999998643  35678899999999999999999999999999954  478999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ...|++||+|++.|+++++.|++++||+||+|+||+++|++.+...
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  203 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL  203 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTT
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhc
Confidence            9999999999999999999999999999999999999999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.5e-39  Score=257.63  Aligned_cols=195  Identities=28%  Similarity=0.416  Sum_probs=159.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|+++++++++++.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   86 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDASLRPEREKLMQTVS   86 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999887777766665432   257889999999999999999999


Q ss_pred             HHc-CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           89 SQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +.+ +++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|
T Consensus        87 ~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  164 (266)
T 1xq1_A           87 SMFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  164 (266)
T ss_dssp             HHHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             HHhCCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchH
Confidence            999 899999999998643  35678899999999999999999999999999988878999999999999888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++|++++.|+++++.|+++.||+|++|+||++.|++....
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  205 (266)
T 1xq1_A          165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV  205 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh
Confidence            99999999999999999999999999999999999987643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.7e-39  Score=255.51  Aligned_cols=199  Identities=32%  Similarity=0.496  Sum_probs=177.9

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI   80 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~   80 (214)
                      |+....|  ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....   .++.++.+|++|++++
T Consensus         1 m~~~~~~--~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~   75 (255)
T 1fmc_A            1 MFNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQEL   75 (255)
T ss_dssp             CCCGGGG--CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHH
T ss_pred             CCCccCC--CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCCCHHHH
Confidence            5544433  5789999999999999999999999999999999999877777766665432   2578899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      +++++++.+.++++|+||||||...+.  ++ +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+
T Consensus        76 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~--~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  152 (255)
T 1fmc_A           76 SALADFAISKLGKVDILVNNAGGGGPK--PF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK  152 (255)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCC--CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCC--CC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC
Confidence            999999999999999999999987543  33 678999999999999999999999999998887899999999999988


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+....|+++|++++.|++.++.|+++.||++++++||++.|++...
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~  199 (255)
T 1fmc_A          153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS  199 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence            89999999999999999999999999999999999999999998654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=7.4e-40  Score=256.59  Aligned_cols=193  Identities=30%  Similarity=0.528  Sum_probs=154.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+.+..++..+.+....   .++.++.+|++|+++++++++++.
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG---INVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT---CCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998 667766666666665432   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+
T Consensus        79 ~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  156 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYA  156 (247)
T ss_dssp             HHHSCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhH
Confidence            999999999999998643  345677888999999999999999999999999888789999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|+++.||++++++||++.|++...
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          157 ASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence            999999999999999999999999999999999998654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-40  Score=256.65  Aligned_cols=184  Identities=33%  Similarity=0.534  Sum_probs=163.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++. ++.       ++.++.+|++|+++++    ++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-------~~~~~~~D~~~~~~~~----~~~~   70 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYP-------GIQTRVLDVTKKKQID----QFAN   70 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GST-------TEEEEECCTTCHHHHH----HHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hcc-------CceEEEeeCCCHHHHH----HHHH
Confidence            478999999999999999999999999999999999876655443 221       5788999999999987    4555


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-CCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~y~  168 (214)
                      .++++|+||||||...+  .++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.+ ....|+
T Consensus        71 ~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  148 (246)
T 2ag5_A           71 EVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYS  148 (246)
T ss_dssp             HCSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHH
T ss_pred             HhCCCCEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHH
Confidence            68899999999998654  356788999999999999999999999999999888889999999999988877 888999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  187 (246)
T 2ag5_A          149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh
Confidence            999999999999999999999999999999999998653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=9.4e-40  Score=256.03  Aligned_cols=197  Identities=31%  Similarity=0.476  Sum_probs=176.6

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++....+  .++.++.+|++|++++++++++
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   78 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG--VKAHGVEMNLLSEESINKAFEE   78 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC--CceEEEEccCCCHHHHHHHHHH
Confidence            44568899999999999999999999999999999999998777776666543211  2578899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....
T Consensus        79 ~~~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  156 (248)
T 2pnf_A           79 IYNLVDGIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVN  156 (248)
T ss_dssp             HHHHSSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHhcCCCCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCch
Confidence            99999999999999998643  3466788999999999999999999999999998887899999999988888889999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++|++++.|++.++.|+++.||++++++||++.|++...
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence            99999999999999999999999999999999999998654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=4.9e-40  Score=258.18  Aligned_cols=189  Identities=29%  Similarity=0.506  Sum_probs=155.1

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++..      ++.+..+|++|.+++.+++++ 
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~-   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD------NYTIEVCNLANKEECSNLISK-   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS------SEEEEECCTTSHHHHHHHHHT-
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc------CccEEEcCCCCHHHHHHHHHh-
Confidence            4468999999999999999999999999999999999998887777666542      578889999999998877754 


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                         ++++|+||||||...+.  ++.+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.+....|
T Consensus        82 ---~~~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  156 (249)
T 3f9i_A           82 ---TSNLDILVCNAGITSDT--LAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANY  156 (249)
T ss_dssp             ---CSCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHH
T ss_pred             ---cCCCCEEEECCCCCCCC--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchh
Confidence               47899999999987543  4567788999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++||+|++.|+++++.|++++||+|++|+||++.|++...+
T Consensus       157 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  197 (249)
T 3f9i_A          157 CASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL  197 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence            99999999999999999999999999999999999987654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.4e-40  Score=287.04  Aligned_cols=190  Identities=28%  Similarity=0.486  Sum_probs=168.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC---------cchhhHHHHhhccCCCCCCceEEEeeCCCHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD---------DLGESVCEDISSSSSSANGCSYVHCDVTKEKD   79 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   79 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.         +.++++.+++.....   +   ..+|++|.++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~---~---~~~d~~d~~~   77 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---V---AVADYNNVLD   77 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC---E---EEEECCCTTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC---e---EEEEcCCHHH
Confidence            358899999999999999999999999999999998754         556666666654321   1   2479999989


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc
Q 044923           80 IENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI  159 (214)
Q Consensus        80 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  159 (214)
                      ++++++++.+++|++|+||||||+...  .++.+.+.++|+++|++|+.|++.++++++|+|++++.|+||++||..+..
T Consensus        78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           78 GDKIVETAVKNFGTVHVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            999999999999999999999998643  357889999999999999999999999999999988889999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +.+++..|++||+|+.+|+++++.|++++||+||+|+|| +.|+|...
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~  202 (604)
T 2et6_A          156 GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTES  202 (604)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHT
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccc
Confidence            999999999999999999999999999999999999998 69988654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3.4e-39  Score=254.61  Aligned_cols=193  Identities=31%  Similarity=0.507  Sum_probs=174.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....   .++.++++|++|+++++++++++.+
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---HDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999877777666665432   2578999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC--ccc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS--HAY  167 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--~~y  167 (214)
                      +++++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++.++||++||..+..+.+..  ..|
T Consensus        87 ~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y  165 (260)
T 3awd_A           87 QEGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAY  165 (260)
T ss_dssp             HHSCCCEEEECCCCCCCS-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHH
T ss_pred             HcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCcccc
Confidence            999999999999986422 35678899999999999999999999999999988778999999999988877777  899


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +++|++++.|++.++.|++++||+|++|+||++.|++..
T Consensus       166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence            999999999999999999999999999999999999875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.5e-39  Score=252.89  Aligned_cols=181  Identities=30%  Similarity=0.433  Sum_probs=164.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   ..+++        .+.++++|++| ++++++++++.+.++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~--------~~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL--------GAVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH--------TCEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh--------CcEEEecCCch-HHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999998754   22222        15778999999 999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC--CCCccchhh
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--VTSHAYTSS  170 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~~~~y~~s  170 (214)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.  +....|++|
T Consensus        70 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s  147 (239)
T 2ekp_A           70 GLHVLVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTA  147 (239)
T ss_dssp             SCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHH
Confidence            99999999998643  35678899999999999999999999999999988888999999999998877  888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++++.|++.++.|++++||+||+|+||+++|++...
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  184 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLP  184 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhc
Confidence            9999999999999999999999999999999998653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=3.9e-39  Score=250.72  Aligned_cols=187  Identities=29%  Similarity=0.432  Sum_probs=163.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.       ++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-------GALPLPGDVREEGDWARAVAAMEEAF   76 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-------hceEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999998776665554432       46889999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|
T Consensus        77 ~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  154 (234)
T 2ehd_A           77 GELSALVNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASK  154 (234)
T ss_dssp             SCCCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHH
Confidence            999999999998643  356778999999999999999999999999999988889999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.|++.++.|+++.||++++|+||+++|++...
T Consensus       155 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          155 FGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEECC---------
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc
Confidence            999999999999999999999999999999998653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-39  Score=258.74  Aligned_cols=194  Identities=32%  Similarity=0.436  Sum_probs=173.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++....   .++.++.+|++|+++++++++++.
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG---YESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC---CceeEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998877777766665432   257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|+
T Consensus       117 ~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  194 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS  194 (285)
T ss_dssp             HHCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHH
Confidence            999999999999998743  356788999999999999999999999999999887789999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++|++++.|+++++.|+++.||+|++|+||+++|++...
T Consensus       195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  233 (285)
T 2c07_A          195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK  233 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence            999999999999999999999999999999999998654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=5e-39  Score=252.82  Aligned_cols=191  Identities=27%  Similarity=0.437  Sum_probs=172.4

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCc-eEEEeeCCCHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC-SYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~   86 (214)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.      .++ .++.+|++|++++++++++
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG------AAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG------GGEEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------ccceeEEEEecCCHHHHHHHHHH
Confidence            346899999999999999999999999999999999999877766665552      145 7889999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC--
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS--  164 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--  164 (214)
                      +.+ ++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+..  
T Consensus        80 ~~~-~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  156 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFA  156 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCB
T ss_pred             HHh-hCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcc
Confidence            998 9999999999998754  35678899999999999999999999999999998888999999999988888877  


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|+++|++++.+++.++.|++++||++++|+||++.|++.+.
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~  199 (254)
T 2wsb_A          157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK  199 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhc
Confidence            8999999999999999999999999999999999999998653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2e-39  Score=255.42  Aligned_cols=195  Identities=27%  Similarity=0.410  Sum_probs=173.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++++|++|||||++|||++++++|+++|++|++++|+ .+.++++.+++....   .++.++.+|++|+++++++++++
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   79 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG---GDAAFFAADLATSEACQQLVDEF   79 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998 777777766665432   25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--C---CeEEEecCCCccc-CC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--R---GSIISTASVCGVI-GG  161 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~---g~iv~~sS~~~~~-~~  161 (214)
                      .++++++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++  .   ++||++||..+.. +.
T Consensus        80 ~~~~g~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  158 (258)
T 3afn_B           80 VAKFGGIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG  158 (258)
T ss_dssp             HHHHSSCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC
T ss_pred             HHHcCCCCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC
Confidence            9999999999999997322 23467788999999999999999999999999997654  3   8999999999887 78


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +....|+++|++++.|++.++.|+++.||++++|+||++.|++...
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence            8889999999999999999999999999999999999999998654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.1e-39  Score=253.46  Aligned_cols=193  Identities=30%  Similarity=0.472  Sum_probs=171.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....  ..++.++.+|++|+++++++++++.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999877776666552211  12578899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCC-CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAK-PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|+||||||...... ..+.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            9999999999864321 115677899999999999999999999999999888789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.|++.++.|+.++||++++|+||++.|++...
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence            999999999999999999999999999999998654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=3.3e-39  Score=265.09  Aligned_cols=195  Identities=12%  Similarity=0.016  Sum_probs=164.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCCcchhh------------HHHHhhccCCCCCCceEEEeeCCCH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSK-HGAKVLIADIKDDLGES------------VCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r~~~~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      -.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+.            ..+.+....   ..+..+.+|++|+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G---~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG---LYAKSINGDAFSD  121 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTSH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC---CceEEEECCCCCH
Confidence            3579999999999999999999999 99999999887655431            222333322   2578899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCC-----------CCCCC---------------------CCCCHHHHHHHHhh
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDE-----------AKPNI---------------------LDNDQAEFERILSV  125 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~  125 (214)
                      ++++++++++.+++|++|+||||||....           ...++                     .+.+.++|++++++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            99999999999999999999999997410           11233                     67899999999999


Q ss_pred             hhhHHH-HHHHHHHH-hhccCCCCeEEEecCCCcccCCCCC--ccchhhHHHHHHHHHHHHHHHccC-CcEEEEEeCCcc
Q 044923          126 NLVGAF-LGTKHAAR-VMKPAGRGSIISTASVCGVIGGVTS--HAYTSSKHGVVGLMKNTAVELGRF-GIRVNCVSPYAV  200 (214)
Q Consensus       126 n~~~~~-~~~~~~~~-~~~~~~~g~iv~~sS~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~-gi~v~~v~Pg~v  200 (214)
                      |..+.+ .+++++.+ .|.+ +.|+||++||.++..+.|.+  .+|++||+++++|+|+++.|++++ |||||+|+||++
T Consensus       202 n~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i  280 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAV  280 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCC
T ss_pred             hchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCC
Confidence            999998 78887765 4554 35899999999999999987  999999999999999999999999 999999999999


Q ss_pred             cCccccccC
Q 044923          201 SSPMAKGFL  209 (214)
Q Consensus       201 ~t~~~~~~~  209 (214)
                      .|++.....
T Consensus       281 ~T~~s~~ip  289 (405)
T 3zu3_A          281 VSQASSAIP  289 (405)
T ss_dssp             CCHHHHTST
T ss_pred             cCchhhcCC
Confidence            999977553

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.2e-39  Score=284.24  Aligned_cols=190  Identities=32%  Similarity=0.508  Sum_probs=164.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|+.|+++|++|++.+++  .++++.+++....   .++..+.+|++  ++.+++++++.
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g---~~~~~~~~Dv~--~~~~~~~~~~~  390 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG---GEAWPDQHDVA--KDSEAIIKNVI  390 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTT---CEEEEECCCHH--HHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcC---CeEEEEEcChH--HHHHHHHHHHH
Confidence            36889999999999999999999999999999998863  3455556655432   24566777873  55678899999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||+...  .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++..+.+++..|+
T Consensus       391 ~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~  468 (604)
T 2et6_A          391 DKYGTIDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYS  468 (604)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHH
T ss_pred             HhcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHH
Confidence            999999999999998753  357889999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|+.+|+++++.|++++||+||+|+||. .|+|....
T Consensus       469 asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~  507 (604)
T 2et6_A          469 SSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI  507 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc
Confidence            9999999999999999999999999999995 99987653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.1e-39  Score=253.34  Aligned_cols=184  Identities=17%  Similarity=0.227  Sum_probs=158.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++.+|++|+++++++++++.+.   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~---   72 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS------NNVGYRARDLASHQEVEQLFEQLDSI---   72 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS------SCCCEEECCTTCHHHHHHHHHSCSSC---
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh------hccCeEeecCCCHHHHHHHHHHHhhc---
Confidence            789999999999999999999999999999999887777666551      25788999999999999998876543   


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      .|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++. +||++||..+..+.+....|++||+|
T Consensus        73 ~d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa  149 (230)
T 3guy_A           73 PSTVVHSAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWA  149 (230)
T ss_dssp             CSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEEeCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHH
Confidence            4999999998653  35778899999999999999999999999999988754 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++.|+++++.|++++||+||+|+||+++|++.+...
T Consensus       150 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  185 (230)
T 3guy_A          150 VKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG  185 (230)
T ss_dssp             HHHHHHHHHHHTTTSSCEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC
Confidence            999999999999999999999999999999977543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.4e-39  Score=269.39  Aligned_cols=194  Identities=13%  Similarity=0.050  Sum_probs=163.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCCcchhh------------HHHHhhccCCCCCCceEEEeeCCCHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSK-HGAKVLIADIKDDLGES------------VCEDISSSSSSANGCSYVHCDVTKEK   78 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r~~~~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~~   78 (214)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+..++            +.+.+....   ..+..+++|++|++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G---~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG---LYSKSINGDAFSDA  136 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTSHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC---CcEEEEEecCCCHH
Confidence            489999999999999999999999 99999999998765543            223343332   25788999999999


Q ss_pred             HHHHHHHHHHHHc-CCccEEEeCCcccC-----------CCCCCC---------------------CCCCHHHHHHHHhh
Q 044923           79 DIENAVNTAVSQY-GKLDIMFNNAGIVD-----------EAKPNI---------------------LDNDQAEFERILSV  125 (214)
Q Consensus        79 ~~~~~~~~~~~~~-g~id~li~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~  125 (214)
                      +++++++++.+++ |+||+||||||...           ....++                     .+.+.++|++++++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 99999999999720           001122                     36799999999999


Q ss_pred             hhhHHH-HHHHHHHHhhccCCCCeEEEecCCCcccCCCCC--ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          126 NLVGAF-LGTKHAARVMKPAGRGSIISTASVCGVIGGVTS--HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       126 n~~~~~-~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      |..+.+ .+++.+.+.+...++|+||++||.++..+.|.+  .+|++||+|+.+|+|+++.|++++|||||+|+||++.|
T Consensus       217 n~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T  296 (422)
T 3s8m_A          217 MGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVT  296 (422)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             hchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcC
Confidence            999987 778887664333346899999999999988866  89999999999999999999999999999999999999


Q ss_pred             cccccc
Q 044923          203 PMAKGF  208 (214)
Q Consensus       203 ~~~~~~  208 (214)
                      ++....
T Consensus       297 ~~~~~i  302 (422)
T 3s8m_A          297 QASAAI  302 (422)
T ss_dssp             TTGGGS
T ss_pred             hhhhcC
Confidence            998654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-38  Score=254.40  Aligned_cols=194  Identities=28%  Similarity=0.411  Sum_probs=173.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++..... ..++.++.+|++|+++++++++++.+
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-PGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-SSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-CceEEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998877777776654321 12477889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC--CeEEEecCCCcc--cCCCCCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR--GSIISTASVCGV--IGGVTSH  165 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--g~iv~~sS~~~~--~~~~~~~  165 (214)
                      .++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.  ++||++||..+.  .+.+...
T Consensus       108 ~~g~iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  185 (279)
T 1xg5_A          108 QHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  185 (279)
T ss_dssp             HHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             hCCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCc
Confidence            99999999999998653  35678899999999999999999999999999988764  899999999887  5677788


Q ss_pred             cchhhHHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|+++|++++.|++.++.|++  +.||++++|+||+++|++..
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  228 (279)
T 1xg5_A          186 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  228 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh
Confidence            999999999999999999998  88999999999999999854

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.7e-39  Score=252.99  Aligned_cols=190  Identities=32%  Similarity=0.530  Sum_probs=171.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ||++|||||++|||++++++|+++|++|+++ .|+.+..+++.+++....   .++.++++|++|+++++++++++.+.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG---GQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT---CEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999985 788777766666665432   257889999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.++||++||..+..+.+....|+++|
T Consensus        78 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (244)
T 1edo_A           78 GTIDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAK  155 (244)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhH
Confidence            999999999998754  346678899999999999999999999999999887789999999999988999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++++.|++.++.|+.+.||++++|+||++.|++...
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (244)
T 1edo_A          156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK  191 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence            999999999999999999999999999999998754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-39  Score=257.88  Aligned_cols=193  Identities=26%  Similarity=0.406  Sum_probs=173.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++....   .++.++.+|++|+++++++++++.
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCCCHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999887777777665542   267899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+....|+
T Consensus       104 ~~~g~iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  181 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC  181 (272)
T ss_dssp             HHTCCCSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH
T ss_pred             HHCCCCcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHH
Confidence            999999999999998653  345677889999999999999999999999999988889999999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHc---cCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELG---RFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~---~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++|++++.|++.++.|+.   +.||+|++|+||+++|++..
T Consensus       182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence            999999999999999996   67999999999999999854

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.4e-39  Score=254.61  Aligned_cols=182  Identities=16%  Similarity=0.170  Sum_probs=162.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..++|++|||||++|||++++++|+++|++|++++|+.+..+.             ...++++|++|+++++++++++.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~~D~~~~~~v~~~~~~~~~   70 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-------------ASVIVKMTDSFTEQADQVTAEVGK   70 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-------------EEEECCCCSCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-------------CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998764321             245678999999999999999999


Q ss_pred             Hc--CCccEEEeCCcccCCCCCCC-CCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           90 QY--GKLDIMFNNAGIVDEAKPNI-LDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        90 ~~--g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      .+  |++|+||||||...+.  ++ .+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+....
T Consensus        71 ~~~~g~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  146 (241)
T 1dhr_A           71 LLGDQKVDAILCVAGGWAGG--NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIG  146 (241)
T ss_dssp             HHTTCCEEEEEECCCCCCCB--CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHH
T ss_pred             HhCCCCCCEEEEcccccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchH
Confidence            99  7999999999986532  45 67788999999999999999999999999976  489999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|++++.|+++++.|++  ++||+||+|+||+++|++....
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~  190 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS  190 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc
Confidence            99999999999999999998  8999999999999999997643

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2e-39  Score=264.37  Aligned_cols=193  Identities=22%  Similarity=0.251  Sum_probs=164.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhcc---CCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS---SSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++|++|||||++|||+++|++|+++|++|+++.|+.+..+...+.+...   .....++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4799999999999999999999999999888888766655554443321   1112367889999999999999999883


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                        +|++|+||||||....  .++.+.+.++|++++++|+.|++.+++.++|+|++++.|+||++||..+..+.+....|+
T Consensus        81 --~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence              5899999999998643  356778999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||++++.|+++++.|+++.||+|++|+||+|+|++....
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhh
Confidence            9999999999999999999999999999999999997653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.6e-39  Score=254.67  Aligned_cols=181  Identities=18%  Similarity=0.215  Sum_probs=161.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEE-e--cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIA-D--IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~--r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+.++++.+++ .      .     +|+.|+++++++++++.+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~------~-----~~~~~~~~v~~~~~~~~~   68 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P------G-----TIALAEQKPERLVDATLQ   68 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T------T-----EEECCCCCGGGHHHHHGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C------C-----CcccCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  8877766665544 1      1     244488888999999999


Q ss_pred             HcCCccEEEeCCcccCCC-CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEA-KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|+||||||..... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.+....|+
T Consensus        69 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  148 (244)
T 1zmo_A           69 HGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYG  148 (244)
T ss_dssp             GSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHH
T ss_pred             HcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHH
Confidence            999999999999986430 0357788999999999999999999999999999988889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +||++++.|+++++.|++++||+||+|+||+++|++.
T Consensus       149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          149 PARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            9999999999999999999999999999999999987

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-39  Score=253.09  Aligned_cols=195  Identities=24%  Similarity=0.323  Sum_probs=170.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....+  .++.++++|++|+++++++++++.
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC--CeeEEEEeeCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999977666555555533222  257889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCC----
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVT----  163 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~----  163 (214)
                      +.++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+.    
T Consensus        88 ~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  165 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  165 (265)
T ss_dssp             HHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence            999999999999998653  3467789999999999999999999999999998765 489999999888766542    


Q ss_pred             ---CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          164 ---SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       164 ---~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                         ...|+++|++++.|++.++.|++++||+|++|+||++.|++...
T Consensus       166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (265)
T 1h5q_A          166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH  212 (265)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc
Confidence               67899999999999999999999999999999999999998765

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-39  Score=254.86  Aligned_cols=186  Identities=30%  Similarity=0.537  Sum_probs=165.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..... ..++.++.+|++|+++++++++++.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE-PQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcC-CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999998777666666543211 125788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCCCccc
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +|++|+||||||...          .++|++.+++|+.+++.+++.++|.|++++   .++||++||..+..+.+....|
T Consensus        84 ~g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY  153 (267)
T ss_dssp             HSCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchH
Confidence            999999999999742          245899999999999999999999998764   6899999999999998999999


Q ss_pred             hhhHHHHHHHHHHH--HHHHccCCcEEEEEeCCcccCccccc
Q 044923          168 TSSKHGVVGLMKNT--AVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       168 ~~sK~a~~~l~~~l--a~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ++||++++.|++++  +.|+++.||+||+|+||+++|++...
T Consensus       154 ~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          154 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence            99999999999995  68899999999999999999998654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.3e-39  Score=253.85  Aligned_cols=178  Identities=28%  Similarity=0.398  Sum_probs=159.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSK-HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++|++|||||++|||+++|++|++ .|+.|++.+|+++...             ..+.++++|++|+++++++++.+. 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~-   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-------------ENLKFIKADLTKQQDITNVLDIIK-   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-------------TTEEEEECCTTCHHHHHHHHHHTT-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-------------ccceEEecCcCCHHHHHHHHHHHH-
Confidence            3679999999999999999999999 7888999888764210             145789999999999999996554 


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                       ++++|+||||||...+  .++.+.+.++|++++++|+.|++.+++.++|+|+++  |+||++||..+..+.+...+|++
T Consensus        68 -~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~a  142 (244)
T 4e4y_A           68 -NVSFDGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTL  142 (244)
T ss_dssp             -TCCEEEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHH
T ss_pred             -hCCCCEEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHH
Confidence             7899999999998754  357889999999999999999999999999999875  78999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||++++.|+++++.|++++||+||+|+||+++|++.+.
T Consensus       143 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  180 (244)
T 4e4y_A          143 SKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN  180 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH
Confidence            99999999999999999999999999999999998754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.5e-38  Score=253.54  Aligned_cols=192  Identities=26%  Similarity=0.441  Sum_probs=171.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+....   .++.++.+|++|+++++++++++.+
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~  107 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG---VHSKAYKCNISDPKSVEETISQQEK  107 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC---SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcceEEEeecCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999887777666654432   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCC-CCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC--CCCCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNIL-DNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--GVTSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~  166 (214)
                      .+|++|+||||||..... .++. +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+  .+....
T Consensus       108 ~~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          108 DFGTIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             HHSCCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred             HhCCCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence            999999999999987541 2445 778899999999999999999999999998887899999999998887  778889


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++|++++.|+++++.|+++.| +|++|+||+++|++..
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence            99999999999999999999999 9999999999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=6.4e-39  Score=260.49  Aligned_cols=190  Identities=30%  Similarity=0.478  Sum_probs=168.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe---------cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD---------IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD   79 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~---------r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   79 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++         |+.+.+++..+++.....      ...+|++|.++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~------~~~~D~~~~~~   78 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG------KAVANYDSVEA   78 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC------EEEEECCCGGG
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC------eEEEeCCCHHH
Confidence            357899999999999999999999999999999964         455666666666654321      23589999999


Q ss_pred             HHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc
Q 044923           80 IENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI  159 (214)
Q Consensus        80 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  159 (214)
                      ++++++++.+.+|++|+||||||....  .++.+.+.++|+..+++|+.|++.+++.++|+|++++.++||++||..+..
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~  156 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  156 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence            999999999999999999999998753  246778999999999999999999999999999988889999999999988


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +.+++..|++||++++.|++.++.|++++||+||+|+||++ |++...
T Consensus       157 ~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          157 GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc
Confidence            99999999999999999999999999999999999999998 877554

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.4e-38  Score=248.98  Aligned_cols=187  Identities=27%  Similarity=0.384  Sum_probs=165.5

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.       .+.++.+|++|+++++++++  
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~--   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------GIEPVCVDLGDWEATERALG--   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHT--
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-------CCCEEEEeCCCHHHHHHHHH--
Confidence            346889999999999999999999999999999999998776655544331       34667999999999988876  


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~  166 (214)
                        .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .++||++||..+..+.+....
T Consensus        73 --~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  148 (244)
T 3d3w_A           73 --SVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSV  148 (244)
T ss_dssp             --TCCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHH
T ss_pred             --HcCCCCEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCch
Confidence              56899999999998643  3467788999999999999999999999999998776 789999999999988899999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++||++++.|++.++.|++++||++++|+||++.|++...
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  189 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhh
Confidence            99999999999999999999999999999999999998653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.5e-39  Score=251.58  Aligned_cols=186  Identities=22%  Similarity=0.318  Sum_probs=161.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~   87 (214)
                      ++++|++|||||++|||+++|++|+++|++ |++++|+.+.  +..+++..... ..++.++.+|++|+ ++++++++++
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHH
Confidence            478999999999999999999999999997 9999988642  22223322211 23578899999998 9999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~  164 (214)
                      .+.++++|+||||||..          +.++|++.+++|+.+++.+++.++|.|.+++   .|+||++||..+..+.+..
T Consensus        79 ~~~~g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  148 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             HHHHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS
T ss_pred             HHhcCCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCc
Confidence            99999999999999974          2356899999999999999999999998764   5899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ..|++||++++.|+++++.++.+.||+|++|+||+++|++.+..
T Consensus       149 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~  192 (254)
T 1sby_A          149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF  192 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc
Confidence            99999999999999999999988899999999999999997653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.3e-38  Score=249.15  Aligned_cols=190  Identities=28%  Similarity=0.432  Sum_probs=170.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceE-EEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSY-VHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+..+++.+++.....   ++.. +.+|++|+++++++++++.+.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS---PLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTC---SCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC---ceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4799999999999999999999999999998 7887777766666654322   4556 899999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      ++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++
T Consensus        78 ~~~~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  155 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVAS  155 (245)
T ss_dssp             HTCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHH
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHH
Confidence            9999999999998643  34677889999999999999999999999999988878999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |++++.+++.++.|+.+.||++++|+||++.|++...
T Consensus       156 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          156 KAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence            9999999999999999999999999999999998654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-39  Score=250.31  Aligned_cols=181  Identities=17%  Similarity=0.227  Sum_probs=162.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+.             ...++.+|++|+++++++++++.+.
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~   67 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-------------SNILVDGNKNWTEQEQSILEQTASS   67 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-------------EEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-------------ccEEEeCCCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999998765321             2456789999999999999999999


Q ss_pred             c--CCccEEEeCCcccCCCCCCC-CCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           91 Y--GKLDIMFNNAGIVDEAKPNI-LDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        91 ~--g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +  +++|+||||||.....  ++ .+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+....|
T Consensus        68 ~~~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  143 (236)
T 1ooe_A           68 LQGSQVDGVFCVAGGWAGG--SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGY  143 (236)
T ss_dssp             HTTCCEEEEEECCCCCCCB--CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHH
T ss_pred             hCCCCCCEEEECCcccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHH
Confidence            9  7999999999986532  44 57788999999999999999999999999976  4799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++|++++.|+++++.|++  +.||+||+|+||+++|++....
T Consensus       144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~  186 (236)
T 1ooe_A          144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW  186 (236)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc
Confidence            9999999999999999998  8999999999999999997653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=2.3e-38  Score=267.97  Aligned_cols=193  Identities=27%  Similarity=0.446  Sum_probs=167.3

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+.. .+++.+.....     .+.++.||++|.++++++++++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~  281 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKV-----GGTALTLDVTADDAVDKITAHV  281 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999988642 22222222221     3568999999999999999999


Q ss_pred             HHHcCC-ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           88 VSQYGK-LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      .+++++ +|+||||||....  ..+.+.+.++|++++++|+.|++++.+.+.|.|.+++.++||++||..+..+.+++..
T Consensus       282 ~~~~g~~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~  359 (454)
T 3u0b_A          282 TEHHGGKVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTN  359 (454)
T ss_dssp             HHHSTTCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHH
T ss_pred             HHHcCCCceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHH
Confidence            999976 9999999999754  3578899999999999999999999999999999888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|+++++|+++++.|++++||+||+|+||+++|+|...+
T Consensus       360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc
Confidence            999999999999999999999999999999999999998754

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=7.1e-38  Score=252.29  Aligned_cols=190  Identities=27%  Similarity=0.385  Sum_probs=171.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++....+  .++.++++|++|+++++++++++.+
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999998877777776654322  2578999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhc-cCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMK-PAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|. +.+.++||++||..+..+.+....|+
T Consensus       101 ~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  178 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  178 (302)
T ss_dssp             HTCSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence            99999999999997643  3466788999999999999999999999999997 45568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ++|++++.|++.++.|+++.||+|++|+||++.|+
T Consensus       179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  213 (302)
T 1w6u_A          179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK  213 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCc
Confidence            99999999999999999999999999999999998

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.3e-38  Score=251.05  Aligned_cols=183  Identities=20%  Similarity=0.203  Sum_probs=161.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||++|||+++|++|+++|++|++++|+.+.++...+ +.....   ++..+     |+++++++++++.+.+|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~---~~~~~-----d~~~v~~~~~~~~~~~g~   72 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP---QLKPM-----SEQEPAELIEAVTSAYGQ   72 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT---TSEEC-----CCCSHHHHHHHHHHHHSC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC---cEEEE-----CHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999999999999887776655 443221   23322     778889999999999999


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|+||||||.... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..+.+....|++||++
T Consensus        73 iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  151 (254)
T 1zmt_A           73 VDVLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAG  151 (254)
T ss_dssp             CCEEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCcCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHH
Confidence            9999999998622 235678899999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcc---------cCcccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAV---------SSPMAK  206 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v---------~t~~~~  206 (214)
                      ++.|+++++.|++++||+||+|+||++         +|++..
T Consensus       152 ~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~  193 (254)
T 1zmt_A          152 ACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK  193 (254)
T ss_dssp             HHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccc
Confidence            999999999999999999999999999         887754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-38  Score=245.16  Aligned_cols=190  Identities=20%  Similarity=0.220  Sum_probs=163.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++|++|||||++|||++++++|+++|  ++|++++|+.+..+++.+.      ...++.++.+|++|+++++++++++.
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI------KDSRVHVLPLTVTCDKSLDTFVSKVG   74 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC------CCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc------cCCceEEEEeecCCHHHHHHHHHHHH
Confidence            357999999999999999999999999  9999999998776554321      12368899999999999999999999


Q ss_pred             HHcC--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------C-----CCeEEEecCC
Q 044923           89 SQYG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA------G-----RGSIISTASV  155 (214)
Q Consensus        89 ~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~g~iv~~sS~  155 (214)
                      +.+|  ++|+||||||...+ ..++.+.+.++|++.+++|+.+++.+++.++|.|.++      +     .++||++||.
T Consensus        75 ~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  153 (250)
T 1yo6_A           75 EIVGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG  153 (250)
T ss_dssp             HHHGGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCG
T ss_pred             HhcCCCCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccC
Confidence            9998  99999999998752 2356788999999999999999999999999999776      5     7899999999


Q ss_pred             CcccCC-------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          156 CGVIGG-------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       156 ~~~~~~-------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+..+.       +....|+++|++++.|+++++.|++++||+|++|+||+++|++...
T Consensus       154 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          154 LGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             GGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             ccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence            888776       5778999999999999999999999999999999999999998753

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=6.8e-38  Score=250.82  Aligned_cols=192  Identities=22%  Similarity=0.289  Sum_probs=171.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.....  .++.++.+|++|+++++++++++.+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--ASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--SEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC--CceEEEeCCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998888777766654322  2578899999999999999999999


Q ss_pred             HcCCccEEEeC-CcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNN-AGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      .+|++|+|||| ||....   ++.+.+.++|++.+++|+.|++.+++.++|.|++. .|+||++||.++..+.+....|+
T Consensus       103 ~~g~iD~li~naag~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  178 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSL---NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYS  178 (286)
T ss_dssp             HHTSCSEEEECCCCCCCC---CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCccCCCC---ccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHH
Confidence            99999999999 565432   34567899999999999999999999999998764 58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVEL--GRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~--~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||++++.|+++++.|+  ...||+|++|+||+++|++...
T Consensus       179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~  219 (286)
T 1xu9_A          179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  219 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHH
Confidence            99999999999999999  6789999999999999998643

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-37  Score=251.12  Aligned_cols=193  Identities=26%  Similarity=0.391  Sum_probs=171.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCC--CCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS--SANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.....  ...++.++.+|++|++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            368899999999999999999999999999999999998887777777654211  123688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.+|++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.+.+++.++||++||.. ..+.+....
T Consensus        94 ~~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~  170 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVH  170 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchh
Confidence            99999999999999997543  346778899999999999999999999999976555578999999988 778888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      |+++|+++..|+++++.|+.+.||+|++|+||++.|++
T Consensus       171 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          171 SGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence            99999999999999999999999999999999999995

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.9e-38  Score=248.61  Aligned_cols=182  Identities=18%  Similarity=0.281  Sum_probs=163.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .-+|++|||||++|||+++|++|+++|++|++++|+.+..+.               ..+.+|++|+++++++++++.+.
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD---------------HSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS---------------EEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc---------------cceEEEeCCHHHHHHHHHHHHHH
Confidence            347999999999999999999999999999999998764321               34688999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||...+. ..+.+.+.++|++.+++|+.+++.+++.++|.|++  .|+||++||..+..+.+....|+++
T Consensus        85 ~g~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s  161 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGAT  161 (251)
T ss_dssp             TCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHH
Confidence            99999999999987543 23567789999999999999999999999999976  4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCccccccCC
Q 044923          171 KHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       171 K~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      |++++.|+++++.|++  ++||+|++|+||+++|++.+.+..
T Consensus       162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~  203 (251)
T 3orf_A          162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS  203 (251)
T ss_dssp             HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc
Confidence            9999999999999987  889999999999999999876543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=4e-38  Score=243.59  Aligned_cols=167  Identities=25%  Similarity=0.317  Sum_probs=151.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+                       +|++|++++++++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~---   56 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFET---   56 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHH---
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHH---
Confidence            478999999999999999999999999999999988753                       899999999988875   


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                       ++++|+||||||...+. .++.+.+.++|++.+++|+.+++.+++.++|+|++  .|+||++||..+..+.+....|++
T Consensus        57 -~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~a  132 (223)
T 3uce_A           57 -IGAFDHLIVTAGSYAPA-GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAA  132 (223)
T ss_dssp             -HCSEEEEEECCCCCCCC-SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             -hCCCCEEEECCCCCCCC-CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHH
Confidence             48999999999987433 46788999999999999999999999999999976  478999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|++++.|+++++.|+++  |+||+|+||+++|++....
T Consensus       133 sK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~  169 (223)
T 3uce_A          133 INAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGM  169 (223)
T ss_dssp             HHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTS
T ss_pred             HHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhc
Confidence            999999999999999987  9999999999999987654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=7.8e-38  Score=244.65  Aligned_cols=187  Identities=31%  Similarity=0.401  Sum_probs=164.7

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+..++..++..       .+.++.+|++|+++++++++ 
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~-   72 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEPVCVDLGDWDATEKALG-   72 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHHT-
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-------CCCcEEecCCCHHHHHHHHH-
Confidence            3456889999999999999999999999999999999998766655444321       35667999999999988876 


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~  165 (214)
                         .++++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.+++ .++||++||..+..+.+...
T Consensus        73 ---~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  147 (244)
T 1cyd_A           73 ---GIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLI  147 (244)
T ss_dssp             ---TCCCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH
T ss_pred             ---HcCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcc
Confidence               56889999999998653  3467788999999999999999999999999998776 78999999999998889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .|+++|++++.|++.++.|+++.||++++|+||++.|++..
T Consensus       148 ~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          148 TYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence            99999999999999999999999999999999999999865

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-37  Score=247.52  Aligned_cols=191  Identities=29%  Similarity=0.457  Sum_probs=170.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++++|++|||||++|||++++++|+++|++|++++| +.+..++..+++....   .++.++.+|++|+++++++++++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998 6666666666665432   25788999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~  166 (214)
                      .++++++|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++ + ++||++||..+. .+.+....
T Consensus        94 ~~~~~~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~  169 (274)
T 1ja9_A           94 VSHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHAL  169 (274)
T ss_dssp             HHHHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHH
T ss_pred             HHHcCCCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCch
Confidence            9999999999999998643  34667899999999999999999999999999983 3 899999999888 77888899


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++|++++.|++.++.|+++.||++++|+||++.|++..
T Consensus       170 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          170 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence            9999999999999999999999999999999999999865

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.8e-38  Score=256.43  Aligned_cols=196  Identities=17%  Similarity=0.203  Sum_probs=159.1

Q ss_pred             CCccCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCC-----------cchhhHHHHhhccCCCCCCceEEE---
Q 044923            8 SPRLQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKD-----------DLGESVCEDISSSSSSANGCSYVH---   71 (214)
Q Consensus         8 ~~~~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~v~~~~---   71 (214)
                      .++++||++|||||  ++|||+++|++|+++|++|++++|++           +.+++. +++.. ......+.++.   
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d~   81 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLDA   81 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECCT
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-cccccccccccccc
Confidence            45688999999999  89999999999999999999998753           111221 11111 00000123333   


Q ss_pred             ---------eeCCC--------HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHH
Q 044923           72 ---------CDVTK--------EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT  134 (214)
Q Consensus        72 ---------~D~~~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  134 (214)
                               +|++|        +++++++++++.+++|++|+||||||.......++.+.+.++|++.+++|+.+++.++
T Consensus        82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                     34443        6789999999999999999999999976422345678899999999999999999999


Q ss_pred             HHHHHhhccCCCCeEEEecCCCcccCCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCccccc
Q 044923          135 KHAARVMKPAGRGSIISTASVCGVIGGVTS-HAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       135 ~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +.++|+|++.  |+||++||..+..+.+.+ ..|++||+|+++|+++++.|+++ +||+||+|+||+|+|++...
T Consensus       162 ~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          162 QHFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASA  234 (315)
T ss_dssp             HHHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHH
T ss_pred             HHHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhh
Confidence            9999999763  899999999999888887 59999999999999999999985 89999999999999998654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=5e-38  Score=252.87  Aligned_cols=197  Identities=21%  Similarity=0.223  Sum_probs=158.9

Q ss_pred             CCCccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCC-----------cchhhHHHHhhccCCCCCCceEEEee
Q 044923            7 MSPRLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKD-----------DLGESVCEDISSSSSSANGCSYVHCD   73 (214)
Q Consensus         7 ~~~~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~D   73 (214)
                      |.++++||++|||||+  +|||+++|++|+++|++|++++|++           +.+++. +++.. .........+.+|
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~   79 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEEC
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccc
Confidence            4557899999999999  9999999999999999999998642           222222 11111 0000001223332


Q ss_pred             ------------CCC--------HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHH
Q 044923           74 ------------VTK--------EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG  133 (214)
Q Consensus        74 ------------~~~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  133 (214)
                                  ++|        +++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.|++.+
T Consensus        80 ~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  159 (297)
T 1d7o_A           80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             eeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence                        232        678999999999999999999999997542234567889999999999999999999


Q ss_pred             HHHHHHhhccCCCCeEEEecCCCcccCCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCccccc
Q 044923          134 TKHAARVMKPAGRGSIISTASVCGVIGGVTS-HAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       134 ~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +++++|+|++  .|+||++||..+..+.+.+ ..|++||+|++.|+++++.|+++ +||+||+|+||+++|++...
T Consensus       160 ~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          160 LSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             HHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence            9999999976  3899999999999888887 69999999999999999999985 89999999999999998654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.2e-38  Score=255.93  Aligned_cols=182  Identities=20%  Similarity=0.270  Sum_probs=157.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.      .++.++++|++|+++++++++++ 
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA------GQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS------SEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------CCeeEEEcCCCCHHHHHHHHHhc-
Confidence            46899999999999999999999999999999999999877766655541      26889999999999999988866 


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC--------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--------  160 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------  160 (214)
                         +++|+||||||...+    ..+.+.++|++++++|+.|++.+++.++|.|.+    +||++||..+..+        
T Consensus        85 ---~~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~  153 (291)
T 3rd5_A           85 ---SGADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLN  153 (291)
T ss_dssp             ---CCEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTT
T ss_pred             ---CCCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccc
Confidence               799999999998743    255678889999999999999999999999975    6999999888755        


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHccCC--cEEEEEeCCcccCcccccc
Q 044923          161 -----GVTSHAYTSSKHGVVGLMKNTAVELGRFG--IRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       161 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~  208 (214)
                           .+....|++||+|++.|++.++.|+++.|  |+||+|+||+++|++.+..
T Consensus       154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          154 WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             ccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence                 34456899999999999999999999888  9999999999999998764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.6e-39  Score=253.55  Aligned_cols=187  Identities=24%  Similarity=0.341  Sum_probs=138.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|++|||||++|||+++|++|++ |++|++++|+.+.+++..+ .       .++.++.+|+++.++ .+.+.+..+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-------~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-------EGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-------TTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-------cCCcceecccchHHH-HHHHHHHHH
Confidence            46899999999999999999999998 9999999998766655433 1       247889999998877 555555566


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      .++++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.+....|++
T Consensus        72 ~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a  148 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAA  148 (245)
T ss_dssp             TCSCCSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHH
T ss_pred             hcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHH
Confidence            78999999999998754  3567788999999999999999999999999998765 89999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ||+|++.|+++++.|++++||+|++|+||++.|++.+.+.
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  188 (245)
T 3e9n_A          149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM  188 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh
Confidence            9999999999999999999999999999999999987654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.2e-38  Score=257.46  Aligned_cols=200  Identities=20%  Similarity=0.229  Sum_probs=136.5

Q ss_pred             CCCccCCcEEEEecC--CChHHHHHHHHHHHcCCeEEEEecCC-----------cchhh-----------HHHHhhccCC
Q 044923            7 MSPRLQGKVALITGG--AGSIGECAARLFSKHGAKVLIADIKD-----------DLGES-----------VCEDISSSSS   62 (214)
Q Consensus         7 ~~~~~~~k~~lItGa--s~gIG~~ia~~L~~~g~~vi~~~r~~-----------~~~~~-----------~~~~~~~~~~   62 (214)
                      |.++++||++|||||  ++|||+++|++|+++|++|++++|++           +.+++           +.+++.....
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            345688999999999  89999999999999999999998642           12211           1122211110


Q ss_pred             CCCCceEEE------------eeCCC--------HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHH
Q 044923           63 SANGCSYVH------------CDVTK--------EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI  122 (214)
Q Consensus        63 ~~~~v~~~~------------~D~~~--------~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~  122 (214)
                      ......++.            +|++|        +++++++++++.+++|++|+||||||.......++.+.+.++|+++
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            000023333            33444        5589999999999999999999999975322345778899999999


Q ss_pred             HhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC-ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcc
Q 044923          123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS-HAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAV  200 (214)
Q Consensus       123 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v  200 (214)
                      +++|+.+++.+++.++|+|++.  |+||++||..+..+.+.+ ..|++||+|+++|+++++.|+++ +||+||+|+||++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            9999999999999999999763  899999999999888887 69999999999999999999985 8999999999999


Q ss_pred             cCcccccc
Q 044923          201 SSPMAKGF  208 (214)
Q Consensus       201 ~t~~~~~~  208 (214)
                      +|++...+
T Consensus       241 ~T~~~~~~  248 (319)
T 2ptg_A          241 KSRAASAI  248 (319)
T ss_dssp             C-------
T ss_pred             cChhhhhc
Confidence            99986543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-37  Score=243.60  Aligned_cols=194  Identities=21%  Similarity=0.239  Sum_probs=168.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcC---CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHG---AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      .++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+. ++....   .++.++.+|++|+++++++++
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~---~~~~~~~~Dl~~~~~v~~~~~   92 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNH---SNIHILEIDLRNFDAYDKLVA   92 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHC---TTEEEEECCTTCGGGHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccC---CceEEEEecCCChHHHHHHHH
Confidence            35789999999999999999999999999   99999999987766543 332222   258899999999999999999


Q ss_pred             HHHHHcC--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------C-----CCeEEEe
Q 044923           86 TAVSQYG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA------G-----RGSIIST  152 (214)
Q Consensus        86 ~~~~~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~g~iv~~  152 (214)
                      ++.+.++  ++|+||||||...+ ..++.+.+.++|++.+++|+.+++.+++.++|.|.++      +     .++||++
T Consensus        93 ~~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           93 DIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            9999998  89999999998752 2356778899999999999999999999999999865      3     5899999


Q ss_pred             cCCCcccCCC---CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          153 ASVCGVIGGV---TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       153 sS~~~~~~~~---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||..+..+.+   ....|+++|++++.|++.++.|++++||+|++|+||+++|++...
T Consensus       172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  229 (267)
T 1sny_A          172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  229 (267)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC
Confidence            9998887653   677899999999999999999999999999999999999999754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=7.3e-38  Score=273.80  Aligned_cols=192  Identities=31%  Similarity=0.520  Sum_probs=155.2

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec---------CCcchhhHHHHhhccCCCCCCceEEEeeCCCHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI---------KDDLGESVCEDISSSSSSANGCSYVHCDVTKEK   78 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r---------~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   78 (214)
                      ..+++||++|||||++|||+++|++|+++|++|++++|         +.+.++...+++.....      ...+|++|.+
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~D~~d~~   87 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG------EAVADYNSVI   87 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC------CEEECCCCGG
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC------eEEEEeCCHH
Confidence            34789999999999999999999999999999999987         66677777777765432      2358999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV  158 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  158 (214)
                      +++++++++.+.+|++|+||||||....  .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++.
T Consensus        88 ~~~~~~~~~~~~~g~iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~  165 (613)
T 3oml_A           88 DGAKVIETAIKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI  165 (613)
T ss_dssp             GHHHHHC----------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            9999999999999999999999998754  36788999999999999999999999999999999989999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+.++...|++||+|+.+|+++++.|++++||+||+|+||.+ |+|....
T Consensus       166 ~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~  214 (613)
T 3oml_A          166 YGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI  214 (613)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc
Confidence            999999999999999999999999999999999999999974 6666544

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-37  Score=242.83  Aligned_cols=180  Identities=23%  Similarity=0.334  Sum_probs=155.7

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +...+++|++|||||++|||+++|++|+++|++|++++|+.+..    +++    +   .+.++ +|+  .+++++++++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~----~---~~~~~-~D~--~~~~~~~~~~   78 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS----G---HRYVV-CDL--RKDLDLLFEK   78 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT----C---SEEEE-CCT--TTCHHHHHHH
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh----C---CeEEE-eeH--HHHHHHHHHH
Confidence            45578999999999999999999999999999999999986322    222    1   35666 999  5566666665


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +    .++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....
T Consensus        79 ~----~~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  152 (249)
T 1o5i_A           79 V----KEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYT  152 (249)
T ss_dssp             S----CCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHH
T ss_pred             h----cCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCch
Confidence            4    389999999998643  3567889999999999999999999999999999888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+++|++++.|+++++.|++++||+||+|+||+++|++..
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (249)
T 1o5i_A          153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK  192 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc
Confidence            9999999999999999999999999999999999999864

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=9.3e-37  Score=254.15  Aligned_cols=195  Identities=12%  Similarity=0.021  Sum_probs=163.8

Q ss_pred             cCCcEEEEecCCChHHHH--HHHHHHHcCCeEEEEecCCcch------------hhHHHHhhccCCCCCCceEEEeeCCC
Q 044923           11 LQGKVALITGGAGSIGEC--AARLFSKHGAKVLIADIKDDLG------------ESVCEDISSSSSSANGCSYVHCDVTK   76 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~--ia~~L~~~g~~vi~~~r~~~~~------------~~~~~~~~~~~~~~~~v~~~~~D~~~   76 (214)
                      ..||++|||||++|||++  +++.|+++|++|++++|+.+..            +.+.+......   .++..+++|++|
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dvtd  134 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG---LVAKNFIEDAFS  134 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC---CcEEEEEeeCCC
Confidence            678999999999999999  9999999999999999876542            23333333322   357889999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCcccCC-----------CCCCC---------------------CCCCHHHHHHHHh
Q 044923           77 EKDIENAVNTAVSQYGKLDIMFNNAGIVDE-----------AKPNI---------------------LDNDQAEFERILS  124 (214)
Q Consensus        77 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~  124 (214)
                      +++++++++++.+++|++|+||||||....           ...++                     .+.+.++|+++++
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~  214 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRK  214 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHH
Confidence            999999999999999999999999997410           01122                     3568999999999


Q ss_pred             hhhhHHH-HHHHHHHHhhccCCCCeEEEecCCCcccCCCCC--ccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcc
Q 044923          125 VNLVGAF-LGTKHAARVMKPAGRGSIISTASVCGVIGGVTS--HAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAV  200 (214)
Q Consensus       125 ~n~~~~~-~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v  200 (214)
                      +|..+.+ .+++.+.+.+...+.|+||++||.++..+.|.+  ++|++||+|+++|+++|+.|+++ +||+||+|+||++
T Consensus       215 vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v  294 (418)
T 4eue_A          215 VMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKAL  294 (418)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             HhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcC
Confidence            9999888 777777765444446899999999999999988  99999999999999999999999 9999999999999


Q ss_pred             cCcccccc
Q 044923          201 SSPMAKGF  208 (214)
Q Consensus       201 ~t~~~~~~  208 (214)
                      .|++....
T Consensus       295 ~T~~s~~i  302 (418)
T 4eue_A          295 VTKASAYI  302 (418)
T ss_dssp             CCHHHHTS
T ss_pred             cChhhhcC
Confidence            99987765

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.8e-36  Score=238.46  Aligned_cols=189  Identities=24%  Similarity=0.299  Sum_probs=163.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSK-HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++....   .++.++.+|++|.++++++++++.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3679999999999999999999999 99999999999887777777765542   2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCC-HHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDND-QAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  161 (214)
                      .++++|+||||||.....   ....+ .++|+..+++|+.+++.+++.++|.|++  .++||++||..+..+.       
T Consensus        79 ~~g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~  153 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKV---ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPEL  153 (276)
T ss_dssp             HHSSEEEEEECCCCCCCT---TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHH
T ss_pred             hcCCCCEEEECCcccccC---CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhH
Confidence            999999999999986432   23334 5889999999999999999999999976  3789999998776320       


Q ss_pred             ----------------------------------CCCccchhhHHHHHHHHHHHHHHHcc----CCcEEEEEeCCcccCc
Q 044923          162 ----------------------------------VTSHAYTSSKHGVVGLMKNTAVELGR----FGIRVNCVSPYAVSSP  203 (214)
Q Consensus       162 ----------------------------------~~~~~y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~Pg~v~t~  203 (214)
                                                        .....|++||++++.|++.++.++++    .||+|++|+||++.|+
T Consensus       154 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~  233 (276)
T 1wma_A          154 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  233 (276)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             HhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccC
Confidence                                              12278999999999999999999987    7999999999999999


Q ss_pred             cccc
Q 044923          204 MAKG  207 (214)
Q Consensus       204 ~~~~  207 (214)
                      +...
T Consensus       234 ~~~~  237 (276)
T 1wma_A          234 MAGP  237 (276)
T ss_dssp             TTCT
T ss_pred             cCCc
Confidence            8653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-36  Score=233.27  Aligned_cols=177  Identities=37%  Similarity=0.559  Sum_probs=158.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .+              ++.++.+|++|+++++++++++ +.++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~--------------~~~~~~~D~~~~~~~~~~~~~~-~~~~   65 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE--------------DLIYVEGDVTREEDVRRAVARA-QEEA   65 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS--------------SSEEEECCTTCHHHHHHHHHHH-HHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc--------------ceEEEeCCCCCHHHHHHHHHHH-HhhC
Confidence            689999999999999999999999999999999864 11              3478899999999999999999 8889


Q ss_pred             CccEEEeCCcccCCCCCCCCC----CCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---C---CeEEEecCCCcccCCC
Q 044923           93 KLDIMFNNAGIVDEAKPNILD----NDQAEFERILSVNLVGAFLGTKHAARVMKPAG---R---GSIISTASVCGVIGGV  162 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~---g~iv~~sS~~~~~~~~  162 (214)
                      ++|++|||||.....  ++.+    .+.++|++.+++|+.+++.+++.+.|.|.+++   .   ++||++||..+..+.+
T Consensus        66 ~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  143 (242)
T 1uay_A           66 PLFAVVSAAGVGLAE--KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI  143 (242)
T ss_dssp             CEEEEEECCCCCCCC--CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT
T ss_pred             CceEEEEcccccCcc--cccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC
Confidence            999999999986532  2333    34559999999999999999999999998764   3   4999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ....|+++|++++.|++.++.|++++||++++|+||++.|++...
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  188 (242)
T 1uay_A          144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG  188 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence            999999999999999999999999999999999999999998654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.4e-35  Score=233.54  Aligned_cols=167  Identities=20%  Similarity=0.283  Sum_probs=138.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||++|||++++++|+++|++|++++|+.+..+.               . +++|++|+++++++++++   +++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~-~~~Dl~~~~~v~~~~~~~---~~~   62 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------D-LSTAEGRKQAIADVLAKC---SKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------C-TTSHHHHHHHHHHHHTTC---TTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------c-cccCCCCHHHHHHHHHHh---CCC
Confidence            689999999999999999999999999999998765431               1 458999999998887732   389


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc---------------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV---------------  158 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~---------------  158 (214)
                      +|+||||||...+.         +.|++.+++|+.+++.+++.++|+|++++.++||++||..+.               
T Consensus        63 id~lv~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           63 MDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             CSEEEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CCEEEECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc
Confidence            99999999975411         128999999999999999999999998888999999999887               


Q ss_pred             -------------cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          159 -------------IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       159 -------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                                   .+.+....|++||++++.|++.++.|++++||+|++|+||+++|++.+..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence                         34456789999999999999999999999999999999999999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=5.6e-34  Score=244.90  Aligned_cols=186  Identities=16%  Similarity=0.198  Sum_probs=160.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEE-ecCC-------------cchhhHHHHhhccCCCCCCceEEEeeCC
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIA-DIKD-------------DLGESVCEDISSSSSSANGCSYVHCDVT   75 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~-~r~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~D~~   75 (214)
                      -++|++|||||++|||+++|+.|+++|++ |+++ +|+.             +..+++.+++....   .++.++.||++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~v~~~~~Dvt  325 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG---ATATVVTCDLT  325 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT---CEEEEEECCTT
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC---CEEEEEECCCC
Confidence            46899999999999999999999999998 7777 8873             45566666665543   36889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           76 KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        76 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      |.++++++++++. +++++|+||||||....  ..+.+.+.++|++++++|+.|++++.+.+.+.+++++ .++||++||
T Consensus       326 d~~~v~~~~~~i~-~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          326 DAEAAARLLAGVS-DAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             SHHHHHHHHHTSC-TTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             CHHHHHHHHHHHH-hcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence            9999999999998 78999999999999764  3678899999999999999999999999999998876 789999999


Q ss_pred             CCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          155 VCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       155 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .++..+.+++..|+++|++++.|+    .++++.||++++|+||+++|+|..
T Consensus       403 ~a~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~  450 (525)
T 3qp9_A          403 VAAIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVT  450 (525)
T ss_dssp             GGGTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGG
T ss_pred             HHHcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCcccccccc
Confidence            999999999999999999998874    567788999999999999999973

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.3e-33  Score=215.42  Aligned_cols=173  Identities=19%  Similarity=0.267  Sum_probs=149.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||+||||++++++|+++  +|++++|+.+..+...+++.       . .++.+|++|++++++++++    +++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-------~-~~~~~D~~~~~~~~~~~~~----~~~   66 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-------A-RALPADLADELEAKALLEE----AGP   66 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-------C-EECCCCTTSHHHHHHHHHH----HCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-------C-cEEEeeCCCHHHHHHHHHh----cCC
Confidence            67999999999999999999999  99999998876666555442       1 6778999999999999876    789


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|+||||||....  .++.+.+.++|++.+++|+.+++.+++.+    .+++.++||++||..+..+.+....|+++|++
T Consensus        67 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  140 (207)
T 2yut_A           67 LDLLVHAVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGA  140 (207)
T ss_dssp             EEEEEECCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHH
Confidence            9999999998643  35677788999999999999999999887    34456899999999999899999999999999


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ++.|++.++.|+++.||++++++||++.|++..
T Consensus       141 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~  173 (207)
T 2yut_A          141 LEAYLEAARKELLREGVHLVLVRLPAVATGLWA  173 (207)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG
T ss_pred             HHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc
Confidence            999999999999999999999999999999843

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.7e-33  Score=213.02  Aligned_cols=161  Identities=20%  Similarity=0.263  Sum_probs=146.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+||||++++++|+ +|++|++++|+.+                    .+.+|++|+++++++++++    +++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            79999999999999999999 9999999998763                    3679999999999988764    789


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |+||||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.+.  ++||++||..+..+.+....|+++|+++
T Consensus        60 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  135 (202)
T 3d7l_A           60 DAIVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAV  135 (202)
T ss_dssp             EEEEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHHHHHH
Confidence            999999997643  346778899999999999999999999999998653  8999999999998899999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +.+++.++.|+ +.||+++.|+||++.|++.
T Consensus       136 ~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~  165 (202)
T 3d7l_A          136 TAFAKSAAIEM-PRGIRINTVSPNVLEESWD  165 (202)
T ss_dssp             HHHHHHHTTSC-STTCEEEEEEECCBGGGHH
T ss_pred             HHHHHHHHHHc-cCCeEEEEEecCccCCchh
Confidence            99999999999 7899999999999999974

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-33  Score=258.87  Aligned_cols=196  Identities=18%  Similarity=0.178  Sum_probs=168.3

Q ss_pred             CCCccCCcEEEEecCCCh-HHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGS-IGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~g-IG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      +.++++||++|||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++..... ...++.+++||++|+++++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            344688999999999998 9999999999999999988 5777777777666643321 123678899999999999999


Q ss_pred             HHHHHHH-----cC-CccEEEeCCcccCCCCCCCCCCC--HHHHHHHHhhhhhHHHHHHHHH--HHhhccCCCCeEEEec
Q 044923           84 VNTAVSQ-----YG-KLDIMFNNAGIVDEAKPNILDND--QAEFERILSVNLVGAFLGTKHA--ARVMKPAGRGSIISTA  153 (214)
Q Consensus        84 ~~~~~~~-----~g-~id~li~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~g~iv~~s  153 (214)
                      ++++.+.     +| ++|+||||||..... .++.+.+  .++|++++++|+.+++.+++.+  .|.|.+++.|+||++|
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g-~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQG-IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCS-BCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCC-CChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            9999998     77 999999999986432 1467777  8999999999999999999998  8899888778999999


Q ss_pred             CCCcccCCCCCccchhhHHHHHHH-HHHHHHHHccCCcEEEEEeCCccc-Ccccc
Q 044923          154 SVCGVIGGVTSHAYTSSKHGVVGL-MKNTAVELGRFGIRVNCVSPYAVS-SPMAK  206 (214)
Q Consensus       154 S~~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~gi~v~~v~Pg~v~-t~~~~  206 (214)
                      |..+..+  +...|++||+|+++| .+.++.++++. |+||+|+||+++ |+|..
T Consensus       629 SiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~  680 (1688)
T 2pff_A          629 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS  680 (1688)
T ss_dssp             SCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSC
T ss_pred             ChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccC
Confidence            9988876  678999999999999 88889888887 999999999999 78754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=4.1e-33  Score=261.55  Aligned_cols=194  Identities=18%  Similarity=0.184  Sum_probs=164.4

Q ss_pred             CccCCcEEEEecCCCh-HHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccC-CCCCCceEEEeeCCCHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGS-IGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSS-SSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         9 ~~~~~k~~lItGas~g-IG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++++||++|||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++.... ....++.+++||++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3588999999999998 9999999999999999998 577766666666553321 112367889999999999999999


Q ss_pred             HHHHH-----cC-CccEEEeCCcccCCCCCCCCCCC--HHHHHHHHhhhhhHHHHHHHHH--HHhhccCCCCeEEEecCC
Q 044923           86 TAVSQ-----YG-KLDIMFNNAGIVDEAKPNILDND--QAEFERILSVNLVGAFLGTKHA--ARVMKPAGRGSIISTASV  155 (214)
Q Consensus        86 ~~~~~-----~g-~id~li~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~g~iv~~sS~  155 (214)
                      ++.+.     +| ++|+||||||+.... .++.+.+  .++|+++|++|+.+++.+++.+  +|.|.+++.|+||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~-~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQG-IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCS-BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCC-CChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            99998     66 999999999986432 1467777  8999999999999999999988  788988877899999999


Q ss_pred             CcccCCCCCccchhhHHHHHHH-HHHHHHHHccCCcEEEEEeCCccc-Ccccc
Q 044923          156 CGVIGGVTSHAYTSSKHGVVGL-MKNTAVELGRFGIRVNCVSPYAVS-SPMAK  206 (214)
Q Consensus       156 ~~~~~~~~~~~y~~sK~a~~~l-~~~la~e~~~~gi~v~~v~Pg~v~-t~~~~  206 (214)
                      .+..+  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|..
T Consensus       830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~  879 (1887)
T 2uv8_A          830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS  879 (1887)
T ss_dssp             TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC----
T ss_pred             HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccc
Confidence            98876  678999999999999 99999999887 999999999999 88764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2.4e-32  Score=255.91  Aligned_cols=194  Identities=21%  Similarity=0.226  Sum_probs=163.4

Q ss_pred             CccCCcEEEEecCCCh-HHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhcc-CCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGS-IGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSS-SSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         9 ~~~~~k~~lItGas~g-IG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++++||++|||||++| ||+++|+.|+++|++|++++ |+.+.+++..+++... .....++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4688999999999999 99999999999999999985 5565555555544222 1112367889999999999999999


Q ss_pred             HHHHH---cC-CccEEEeCCcccCCCCCCCCCCC--HHHHHHHHhhhhhHHHHHHHH--HHHhhccCCCCeEEEecCCCc
Q 044923           86 TAVSQ---YG-KLDIMFNNAGIVDEAKPNILDND--QAEFERILSVNLVGAFLGTKH--AARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        86 ~~~~~---~g-~id~li~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      ++.+.   +| ++|+||||||+.... .++.+.+  .++|+++|++|+.+++.+++.  ++|.|.+++.|+||++||..+
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~-~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENG-REIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTT-CCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCC-CChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            99998   88 999999999986432 1567888  899999999999999999977  789998877789999999998


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHH-HHccCCcEEEEEeCCccc-Ccccc
Q 044923          158 VIGGVTSHAYTSSKHGVVGLMKNTAV-ELGRFGIRVNCVSPYAVS-SPMAK  206 (214)
Q Consensus       158 ~~~~~~~~~y~~sK~a~~~l~~~la~-e~~~~gi~v~~v~Pg~v~-t~~~~  206 (214)
                      ..+  +...|++||+++++|++.++. ++++. |+||+|+||+++ |+|..
T Consensus       807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~  854 (1878)
T 2uv9_A          807 TFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMS  854 (1878)
T ss_dssp             SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCS
T ss_pred             ccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccc
Confidence            876  477999999999999887655 47776 999999999999 99854

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=1.8e-31  Score=227.32  Aligned_cols=180  Identities=16%  Similarity=0.251  Sum_probs=152.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc---chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDD---LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +|++|||||++|||+++|+.|+++|+ +|++++|+..   ..+++.+++....   .++.++.||++|.+++.++++++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG---VRVTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC---CeEEEEEccCCCHHHHHHHHHHHH
Confidence            59999999999999999999999999 6888888643   3445555555433   368899999999999999999987


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +. +++|+||||||.... ..++.+.+.++|+++|++|+.|++++.+.+.+    ...++||++||.++..+.+++..|+
T Consensus       316 ~~-g~ld~vVh~AGv~~~-~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~Ya  389 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHD-DAPVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYA  389 (496)
T ss_dssp             TT-SCEEEEEECCCCCCS-CCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHH
T ss_pred             Hh-CCCeEEEECCcccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHH
Confidence            77 799999999998722 23578899999999999999999988887655    3457899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ++|++++.|++.+    +..||++++|+||++.++.+
T Consensus       390 AaKa~ldala~~~----~~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          390 AANAYLDALAEHR----RSLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             HHHHHHHHHHHHH----HHTTCCCEEEEECEESSSCC
T ss_pred             HHHHHHHHHHHHH----HhcCCeEEEEECCcccCCcc
Confidence            9999999888754    45699999999999876543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=1.3e-31  Score=239.92  Aligned_cols=178  Identities=16%  Similarity=0.263  Sum_probs=156.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHH-HcCCe-EEEEecC---CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFS-KHGAK-VLIADIK---DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~-~~g~~-vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .+|++|||||++|||+++|+.|+ ++|++ |++++|+   .+..+++.+++....   .++.+++||++|++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G---~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG---AEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC---CcEEEEEeecCCHHHHHHHHHH
Confidence            68999999999999999999999 79995 9999998   444556666665543   3688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.+.+ +||+||||||....  ..+.+++.++|++.+++|+.|++++.+.+.|.|      +||++||.++..+.+++..
T Consensus       606 ~~~~~-~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~  676 (795)
T 3slk_A          606 IPDEH-PLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGN  676 (795)
T ss_dssp             SCTTS-CEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHH
T ss_pred             HHHhC-CCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHH
Confidence            98877 99999999999764  367889999999999999999999999998777      6999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      |+++|+    |+++++.++++.||++|+|+||++.|+++
T Consensus       677 YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~  711 (795)
T 3slk_A          677 YAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGM  711 (795)
T ss_dssp             HHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCH
T ss_pred             HHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchh
Confidence            999996    66777777778899999999999998753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=3.3e-31  Score=207.86  Aligned_cols=167  Identities=25%  Similarity=0.296  Sum_probs=144.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||+||||++++++|+++|++|++++|+.+..+.                .+.+|++|+++++++++++   .++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~~~~~~~~~~---~~~   62 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRETAVAAVLDRC---GGV   62 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHHHHHH---TTC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHHHHHHHHHHc---CCC
Confidence            689999999999999999999999999999998764321                1458999999998888744   378


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC------------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG------------  161 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------  161 (214)
                      +|+||||||....         .++|+..+++|+.+++.+++.+.|.|++.+.++||++||..+..+.            
T Consensus        63 ~d~vi~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           63 LDGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             CSEEEECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             ccEEEECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc
Confidence            9999999997541         1238899999999999999999999988877899999998887654            


Q ss_pred             --------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          162 --------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       162 --------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                                    +....|+++|++++.+++.++.++.+.||++++++||.+.|++....
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~  194 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS  194 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc
Confidence                          45678999999999999999999998999999999999999986543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=2.4e-29  Score=245.37  Aligned_cols=190  Identities=15%  Similarity=0.109  Sum_probs=149.5

Q ss_pred             ccCCcEEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCCcc-----hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHH
Q 044923           10 RLQGKVALITGGAGS-IGECAARLFSKHGAKVLIADIKDDL-----GESVCEDISSSSSSANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        10 ~~~~k~~lItGas~g-IG~~ia~~L~~~g~~vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...   ..++..+++|++|+++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~---G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF---DATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT---TCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc---CCeEEEEEecCCCHHHHHHH
Confidence            489999999999999 9999999999999999999998766     44455544332   23578899999999999999


Q ss_pred             HHHHHH----HcCCccEEEeCCcc----cCCCCCCCCCCCHHHH----HHHHhhhhhHHHHHHHHHHHhhccCCCC----
Q 044923           84 VNTAVS----QYGKLDIMFNNAGI----VDEAKPNILDNDQAEF----ERILSVNLVGAFLGTKHAARVMKPAGRG----  147 (214)
Q Consensus        84 ~~~~~~----~~g~id~li~~ag~----~~~~~~~~~~~~~~~~----~~~~~~n~~~~~~~~~~~~~~~~~~~~g----  147 (214)
                      ++++.+    .+|++|+||||||.    .... ....+.+.++|    +..+++|+.+.+.+++.+.|.|.+++.+    
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a-~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ 2288 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFA-APRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLH 2288 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECC-CCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCccc-ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeE
Confidence            999998    89999999999997    2111 11223333444    4559999999999999999999876532    


Q ss_pred             eEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHH--HccCCcEEEEEeCCccc-Ccccc
Q 044923          148 SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE--LGRFGIRVNCVSPYAVS-SPMAK  206 (214)
Q Consensus       148 ~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e--~~~~gi~v~~v~Pg~v~-t~~~~  206 (214)
                      .++..|+..+.  .++..+|++||+|+++|+|+++.|  +++ +|+||+++||+|+ |++..
T Consensus      2289 ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D         2289 VVLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp             EEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTT
T ss_pred             EEEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccc
Confidence            23334443332  345568999999999999999999  665 6999999999999 76643

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=6.6e-29  Score=211.80  Aligned_cols=179  Identities=17%  Similarity=0.241  Sum_probs=150.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCc---chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDD---LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      -+++++|||||+||||+++++.|+++|++ |++++|+..   ..+++.+++....   .++.++.||++|.+++.+++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g---~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG---ARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC---CEEEEEEeCCCCHHHHHHHHHH
Confidence            46899999999999999999999999995 999999865   3344555554432   3688999999999999999998


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      + +.++++|+||||||....  ..+.+.+.+++++++++|+.|++++.+.+.+    .+.++||++||.++..+.+++..
T Consensus       301 i-~~~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~  373 (486)
T 2fr1_A          301 I-GDDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGG  373 (486)
T ss_dssp             S-CTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTT
T ss_pred             H-HhcCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHH
Confidence            8 567899999999998754  3567889999999999999999998887643    45689999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      |+++|++++.|++.++    ..|+++++|+||++.++
T Consensus       374 Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~  406 (486)
T 2fr1_A          374 YAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGS  406 (486)
T ss_dssp             THHHHHHHHHHHHHHH----HTTCCCEEEEECCBC--
T ss_pred             HHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCC
Confidence            9999999998876544    56999999999999886

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=2.1e-28  Score=209.59  Aligned_cols=180  Identities=24%  Similarity=0.354  Sum_probs=150.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcc---hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDL---GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      -.+|++|||||+||||++++++|+++|+ +|++++|+...   .+++.+++....   .++.++.||++|.+++.+++++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g---~~v~~~~~Dvtd~~~v~~~~~~  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG---CEVVHAACDVAERDALAALVTA  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT---CEEEEEECCSSCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC---CEEEEEEeCCCCHHHHHHHHhc
Confidence            3679999999999999999999999999 58999998643   344555554432   3688999999999999998876


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                           +++|+||||||.....  .+.+.+.++++.++++|+.|++++.+.+.+.   .+.++||++||..+..+.+++..
T Consensus       334 -----~~ld~VVh~AGv~~~~--~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~  403 (511)
T 2z5l_A          334 -----YPPNAVFHTAGILDDA--VIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGA  403 (511)
T ss_dssp             -----SCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHH
T ss_pred             -----CCCcEEEECCcccCCc--ccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHH
Confidence                 6899999999987543  4677899999999999999999988765332   14578999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcc-cCccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAV-SSPMAKG  207 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~  207 (214)
                      |+++|++++.|++.++    ..|+++++|+||++ .|+|...
T Consensus       404 YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          404 YAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             HHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCC
T ss_pred             HHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCccccc
Confidence            9999999999988653    56999999999999 7877643

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=5e-28  Score=191.69  Aligned_cols=157  Identities=20%  Similarity=0.221  Sum_probs=131.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|++|||||+||||++++++|+++|++|++++|++...+            ..++.++.+|++|++++.++++      
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            4689999999999999999999999999999999875543            1257899999999999998887      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc------------c
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV------------I  159 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~  159 (214)
                       ++|+||||||...          .++|++.+++|+.|++.+++++.+    .+.++||++||..+.            .
T Consensus        64 -~~D~vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~  128 (267)
T 3rft_A           64 -GCDGIVHLGGISV----------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDV  128 (267)
T ss_dssp             -TCSEEEECCSCCS----------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTS
T ss_pred             -CCCEEEECCCCcC----------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCC
Confidence             7899999999732          234789999999999999998844    456799999998776            3


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +.+....|++||++.+.+++.++.++   |++++.|.||.+.++.
T Consensus       129 ~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~  170 (267)
T 3rft_A          129 PARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEP  170 (267)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCC
Confidence            34455789999999999999999885   6777777777776654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=2.1e-26  Score=178.93  Aligned_cols=160  Identities=19%  Similarity=0.257  Sum_probs=128.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCc-eEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC-SYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..++||++||||||||||++++++|+++|++|++++|+.+..+.+...         ++ .++.+|++  +       .+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~---------~~~~~~~~Dl~--~-------~~   78 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER---------GASDIVVANLE--E-------DF   78 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT---------TCSEEEECCTT--S-------CC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC---------CCceEEEcccH--H-------HH
Confidence            468899999999999999999999999999999999998766544321         46 88999998  2       33


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---CCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---VTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~  164 (214)
                      .+.++++|+||||||...+          ++|+..+++|+.++..+++++.+    .+.++||++||.++..+.   +..
T Consensus        79 ~~~~~~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~  144 (236)
T 3e8x_A           79 SHAFASIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNM  144 (236)
T ss_dssp             GGGGTTCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGG
T ss_pred             HHHHcCCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhh
Confidence            4445689999999997531          34889999999999998888743    356789999998777664   466


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ..|+.+|++++.+.+       ..|++++.+.||.+.++....
T Consensus       145 ~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~  180 (236)
T 3e8x_A          145 RHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTG  180 (236)
T ss_dssp             HHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCS
T ss_pred             hhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCC
Confidence            799999999998876       468999999999999987543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=7.5e-26  Score=185.41  Aligned_cols=177  Identities=16%  Similarity=0.173  Sum_probs=142.9

Q ss_pred             ccCCCCCccCCcEEEEecCCChHHHHHHHHHHHc-CC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH
Q 044923            3 QANSMSPRLQGKVALITGGAGSIGECAARLFSKH-GA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI   80 (214)
Q Consensus         3 ~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~-g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~   80 (214)
                      ++..+...+++|++|||||+|+||++++++|+++ |+ +|++++|++...+.+.+.+..     .++.++.+|++|.+++
T Consensus        11 ~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~v~~~~~Dl~d~~~l   85 (344)
T 2gn4_A           11 SMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND-----PRMRFFIGDVRDLERL   85 (344)
T ss_dssp             -----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC-----TTEEEEECCTTCHHHH
T ss_pred             CCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC-----CCEEEEECCCCCHHHH
Confidence            3444555688999999999999999999999999 98 899999987766665555432     2578999999999998


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      .++++       ++|+|||+||.....      ....++...+++|+.|+..+++++.+.    +.+++|++||.....|
T Consensus        86 ~~~~~-------~~D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p  148 (344)
T 2gn4_A           86 NYALE-------GVDICIHAAALKHVP------IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP  148 (344)
T ss_dssp             HHHTT-------TCSEEEECCCCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC
T ss_pred             HHHHh-------cCCEEEECCCCCCCC------chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC
Confidence            88775       799999999975311      122346789999999999999988774    4578999999765543


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                         ...|+++|++.+.+++.++.++++.|++++++.||.+.++.
T Consensus       149 ---~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          149 ---INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             ---CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence               46899999999999999999888889999999999998864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.94  E-value=2.6e-26  Score=224.29  Aligned_cols=178  Identities=14%  Similarity=0.136  Sum_probs=140.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhh---HHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGES---VCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+....+.   ..+++...   ..++.++.||++|.++++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ---GVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT---TCEEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC---CCEEEEEecCCCCHHHHHHHHHHH
Confidence            6899999999999999999999999997 8888998765543   33333332   236788999999999999999998


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      . .+|+||+||||||....  .++.+++.++|++++++|+.|++++.+.+.+.|.+.  |+||++||.++..+.+++..|
T Consensus      1960 ~-~~g~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y 2034 (2512)
T 2vz8_A         1960 T-QLGPVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANY 2034 (2512)
T ss_dssp             H-HHSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHH
T ss_pred             H-hcCCCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHH
Confidence            7 47999999999998753  357889999999999999999999999999988654  799999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                      +++|+++++|++..+.+    |++..++.+|.+.
T Consensus      2035 ~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2035 GFANSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999999999988765    7888888887764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.93  E-value=2.7e-25  Score=181.17  Aligned_cols=192  Identities=9%  Similarity=0.016  Sum_probs=151.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCCcchh------------hHHHHhhccCCCCCCceEEEeeCCCH
Q 044923           11 LQGKVALITGGAGSIGECAARLFS-KHGAKVLIADIKDDLGE------------SVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~-~~g~~vi~~~r~~~~~~------------~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      ..+|+|||||||+|||++++..|+ +.|++++++.+..+..+            .+.+.++....   +...+.||++++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~---~a~~i~~Dv~d~  124 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGL---YSVTIDGDAFSD  124 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTC---CEEEEESCTTSH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCC---CceeEeCCCCCH
Confidence            457999999999999999999999 68999998887654332            23344444433   678899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCC-----------C---------------------CCCCCHH---HHHHH
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP-----------N---------------------ILDNDQA---EFERI  122 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~-----------~---------------------~~~~~~~---~~~~~  122 (214)
                      ++++++++++++++|+||+||||++.......           +                     +.-.+.+   .+...
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            99999999999999999999999997631100           0                     0112344   45566


Q ss_pred             HhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC--CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcc
Q 044923          123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV--TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAV  200 (214)
Q Consensus       123 ~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v  200 (214)
                      |.....+.+...+...++|.+  .+++|.+|+.++....|  ....++++|++|+..++.|+.++++  ++++.++||.+
T Consensus       205 Mg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~  280 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGL  280 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCC
T ss_pred             HhhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcc
Confidence            667777778888888888876  47899999999987666  4458999999999999999999974  89999999999


Q ss_pred             cCccccccC
Q 044923          201 SSPMAKGFL  209 (214)
Q Consensus       201 ~t~~~~~~~  209 (214)
                      .|.....+.
T Consensus       281 vT~AssaIP  289 (401)
T 4ggo_A          281 VTRASAVIP  289 (401)
T ss_dssp             CCTTGGGSS
T ss_pred             ccchhhcCC
Confidence            998876554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=9.7e-26  Score=175.60  Aligned_cols=157  Identities=17%  Similarity=0.145  Sum_probs=127.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++|++|||||+||||++++++|+++|+  +|++++|+.+..+....         .++.++.+|++|++++.++++   
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~---   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVVDFEKLDDYASAFQ---   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG---------GGCEEEECCGGGGGGGGGGGS---
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc---------CCceEEecCcCCHHHHHHHhc---
Confidence            6789999999999999999999999999  99999998765543221         146788999999998887765   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                          ++|+||||||...         ...+++..+++|+.++..+++++.    +.+.++||++||.++..  +....|+
T Consensus        84 ----~~d~vi~~ag~~~---------~~~~~~~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~--~~~~~Y~  144 (242)
T 2bka_A           84 ----GHDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADK--SSNFLYL  144 (242)
T ss_dssp             ----SCSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHHH
T ss_pred             ----CCCEEEECCCccc---------ccCCcccceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCC--CCcchHH
Confidence                7999999999642         134578899999999888777653    44567999999987764  3456899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCc-EEEEEeCCcccCccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGI-RVNCVSPYAVSSPMA  205 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi-~v~~v~Pg~v~t~~~  205 (214)
                      ++|++++.+++.+       ++ +++.|+||.+.|++.
T Consensus       145 ~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          145 QVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             HHHHHHHHHHHTT-------CCSEEEEEECCEEECTTG
T ss_pred             HHHHHHHHHHHhc-------CCCCeEEEcCceecCCCC
Confidence            9999999988754       45 899999999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=3.3e-25  Score=180.53  Aligned_cols=178  Identities=14%  Similarity=0.125  Sum_probs=141.5

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEE-EeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV-HCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~   85 (214)
                      |...+++|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+....+  .++.++ .+|++|.++++++++
T Consensus         5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTTTTTTTTT
T ss_pred             cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC--CceEEEEecCCcChHHHHHHHc
Confidence            44567899999999999999999999999999999999987666555444432211  256777 799999988877765


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-CCC--
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-GGV--  162 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-~~~--  162 (214)
                             ++|+|||+||.....         +++...+++|+.++..+++++.+.   .+.+++|++||.+.+. +.+  
T Consensus        83 -------~~d~vih~A~~~~~~---------~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~  143 (342)
T 1y1p_A           83 -------GAAGVAHIASVVSFS---------NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNV  143 (342)
T ss_dssp             -------TCSEEEECCCCCSCC---------SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTC
T ss_pred             -------CCCEEEEeCCCCCCC---------CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCC
Confidence                   799999999975321         246789999999999999887652   3457899999976652 111  


Q ss_pred             ----------------------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 ----------------------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 ----------------------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                                  ....|+.+|++.+.+++.++.+++. +++++.+.||.+.++...
T Consensus       144 ~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          144 EGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             CCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSC
T ss_pred             CCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCC
Confidence                                        2257999999999999999999876 899999999999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=3.7e-24  Score=175.73  Aligned_cols=177  Identities=18%  Similarity=0.130  Sum_probs=143.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+..    ..++.++.+|++|++++.++++..   
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~---   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV----ADGMQSEIGDIRDQNKLLESIREF---   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT----TTTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc----CCceEEEEccccCHHHHHHHHHhc---
Confidence            5789999999999999999999999999999999987766555444321    125788999999999999888765   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  159 (214)
                        ++|+|||+||...      .+.+.+++...+++|+.++..+++++.+.   .+.+++|++||.+.+.           
T Consensus        80 --~~d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~  148 (357)
T 1rkx_A           80 --QPEIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYREN  148 (357)
T ss_dssp             --CCSEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTT
T ss_pred             --CCCEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCC
Confidence              7999999999631      12235668899999999999999988763   1246899999976331           


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHc------cCCcEEEEEeCCcccCccc
Q 044923          160 -GGVTSHAYTSSKHGVVGLMKNTAVELG------RFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 -~~~~~~~y~~sK~a~~~l~~~la~e~~------~~gi~v~~v~Pg~v~t~~~  205 (214)
                       +......|+.+|++.+.+++.++.++.      +.|++++.+.||.+.+|..
T Consensus       149 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          149 EAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence             223456899999999999999999874      4589999999999998753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=2.9e-24  Score=175.18  Aligned_cols=175  Identities=17%  Similarity=0.156  Sum_probs=137.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++++|||||+|+||++++++|+++|++|++++|+.+..++..+.+....+  .++.++.+|++|++++.+++++     
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~-----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG--KTPAFHETDVSDERALARIFDA-----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS--CCCEEECCCTTCHHHHHHHHHH-----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC--CCceEEEeecCCHHHHHHHHhc-----
Confidence            467999999999999999999999999999999988776666555543322  2578899999999999998875     


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------C
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------G  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~  160 (214)
                      +++|+||||||.....      ...++....+++|+.++..+++.+    ++.+.++||++||.+.+.           +
T Consensus        77 ~~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~  146 (341)
T 3enk_A           77 HPITAAIHFAALKAVG------ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFP  146 (341)
T ss_dssp             SCCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSC
T ss_pred             cCCcEEEECccccccC------ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCC
Confidence            4899999999975321      123445678899998888766654    455567999999966542           1


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ......|+.+|++.+.+++.++.++.  +++++.+.|+.+..+..
T Consensus       147 ~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          147 LSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHE  189 (341)
T ss_dssp             CBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCT
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCcc
Confidence            22336899999999999999998853  69999999999987743

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=3e-24  Score=175.06  Aligned_cols=177  Identities=20%  Similarity=0.128  Sum_probs=135.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..+.  +.+..... ..++.++.+|++|++++.++++.+   
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~---   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI-ENDVKIIHMDLLEFSNIIRTIEKV---   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC-TTTEEECCCCTTCHHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc-cCceeEEECCCCCHHHHHHHHHhc---
Confidence            357899999999999999999999999999999998765432  11111111 125788899999999999988765   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-----------c
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-----------I  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~  159 (214)
                        ++|+|||+||....      +.+.++++..+++|+.++..+++++.+. ..  .++||++||.+.+           .
T Consensus        75 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~--~~~iv~~SS~~vyg~~~~~~~~e~~  143 (345)
T 2z1m_A           75 --QPDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTV-KP--DTKFYQASTSEMFGKVQEIPQTEKT  143 (345)
T ss_dssp             --CCSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT--TCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC--CceEEEEechhhcCCCCCCCCCccC
Confidence              78999999997521      1123458899999999999999998753 21  3689999997543           2


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHc---cCCcEEEEEeCCcccCcc
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELG---RFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~---~~gi~v~~v~Pg~v~t~~  204 (214)
                      +.+....|+.+|++.+.+++.++.+++   ..++.++.+.||...|.+
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          144 PFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch
Confidence            334456899999999999999999875   445677888899887764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.91  E-value=1.7e-23  Score=170.75  Aligned_cols=171  Identities=18%  Similarity=0.139  Sum_probs=136.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |++|||||+|+||++++++|+++|++|++++|+. ...+...+.+...    .++.++.+|++|++++.++++..     
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKY-----   72 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC----CceEEEEcCCCCHHHHHHHHhcc-----
Confidence            5799999999999999999999999999998853 2222223333321    24788999999999999888752     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-------------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-------------  159 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------------  159 (214)
                      ++|+|||+||....      +.+.++++..+++|+.++..+++++.+...+   ++||++||.+.+.             
T Consensus        73 ~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~---~~iv~~SS~~v~g~~~~~~~~e~~~~  143 (347)
T 1orr_A           73 MPDSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNSN---CNIIYSSTNKVYGDLEQYKYNETETR  143 (347)
T ss_dssp             CCSEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT---CEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             CCCEEEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC---ceEEEeccHHHhCCCCcCCccccccc
Confidence            69999999996421      1234568899999999999999999887642   5899999976432             


Q ss_pred             --------------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 --------------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 --------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                    +.+....|+.+|++.+.+++.++.++   |++++.+.||.+.++..
T Consensus       144 ~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          144 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred             ccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence                          12245689999999999999999875   79999999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=7.8e-24  Score=162.84  Aligned_cols=143  Identities=8%  Similarity=0.040  Sum_probs=118.9

Q ss_pred             cEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFS-KHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~-~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |+++||||+||||++++++|+ ++|++|+++.|+++ .++++.+    ..   .++.++.+|++|++++.++++      
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~----~~---~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII----DH---ERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH----TS---TTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc----CC---CceEEEECCCCCHHHHHHHHc------
Confidence            789999999999999999999 89999999999876 5544431    11   257889999999999988876      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH------  165 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~------  165 (214)
                       ++|+||||||..                     |+.     ++.+++.|++.+.++||++||..+..+.+...      
T Consensus        73 -~~d~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~  125 (221)
T 3r6d_A           73 -NAEVVFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFD  125 (221)
T ss_dssp             -TCSEEEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHH
T ss_pred             -CCCEEEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccc
Confidence             789999999942                     222     77888888888888999999998877655443      


Q ss_pred             ----cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          166 ----AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       166 ----~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                          .|+.+|.+++.+.+.       .|++++.|+||++.++
T Consensus       126 ~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          126 NLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYND  160 (221)
T ss_dssp             TSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECC
T ss_pred             ccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCC
Confidence                899999999887753       5899999999999887

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.91  E-value=8.4e-24  Score=171.06  Aligned_cols=167  Identities=17%  Similarity=0.155  Sum_probs=133.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..+.+++|||||+|+||++++++|+++|++|++++|+.+. +.    +        ++.++.+|++|++++.++++.   
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--------~~~~~~~Dl~d~~~~~~~~~~---   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--------NVEMISLDIMDSQRVKKVISD---   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--------TEEEEECCTTCHHHHHHHHHH---
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--------eeeEEECCCCCHHHHHHHHHh---
Confidence            3456899999999999999999999999999999998654 21    1        467889999999999988875   


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC--------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--------  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------  161 (214)
                        +++|+|||+||.....      .+.++++..+++|+.++..+++++ +.+.  +.++||++||.+.+...        
T Consensus        73 --~~~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g~~~~~~~~~~  141 (321)
T 2pk3_A           73 --IKPDYIFHLAAKSSVK------DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYGMILPEESPVS  141 (321)
T ss_dssp             --HCCSEEEECCSCCCHH------HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTBSCCGGGCSBC
T ss_pred             --cCCCEEEEcCcccchh------hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcCCCCCCCCCCC
Confidence              3799999999975321      122357899999999999999988 5552  35789999998654322        


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 -----VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 -----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                           +....|+.+|++.+.+++.++.++   |++++.+.|+.+.+|...
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          142 EENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             TTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCC
Confidence                 345789999999999999999874   899999999999887643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.91  E-value=9e-24  Score=171.86  Aligned_cols=165  Identities=21%  Similarity=0.244  Sum_probs=129.3

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +.+++++++|||||+|+||++++++|+++|++|++++|+.+...+..+.+       .++.++.+|++|.+++.++++++
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-------~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-------AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-------CCceEEEeeCCCHHHHHHHHhhc
Confidence            44688999999999999999999999999999999999765433221111       25788999999999999888765


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----C
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----V  162 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~  162 (214)
                           ++|+||||||.....       +.+++.  +++|+.++..+++++..    .+.++||++||.+.+...     +
T Consensus        88 -----~~D~vih~A~~~~~~-------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~  149 (330)
T 2pzm_A           88 -----KPTHVVHSAAAYKDP-------DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIP  149 (330)
T ss_dssp             -----CCSEEEECCCCCSCT-------TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBC
T ss_pred             -----CCCEEEECCccCCCc-------cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCC
Confidence                 799999999975321       345566  99999999999998874    345789999998765433     2


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHccCCcE-EEEEeCCc
Q 044923          163 ------TSHAYTSSKHGVVGLMKNTAVELGRFGIR-VNCVSPYA  199 (214)
Q Consensus       163 ------~~~~y~~sK~a~~~l~~~la~e~~~~gi~-v~~v~Pg~  199 (214)
                            ....|+.+|++.+.+++.+  ++....|| ++.+.||.
T Consensus       150 ~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~  191 (330)
T 2pzm_A          150 IDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL  191 (330)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC
T ss_pred             cCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC
Confidence                  5578999999999999887  44445667 56777775

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=6.6e-23  Score=170.42  Aligned_cols=175  Identities=18%  Similarity=0.204  Sum_probs=133.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHH-HcCCeEEEEecCCcc---------hhhHHHHhhccCCC--CCC---ceEEEeeCCCH
Q 044923           13 GKVALITGGAGSIGECAARLFS-KHGAKVLIADIKDDL---------GESVCEDISSSSSS--ANG---CSYVHCDVTKE   77 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~-~~g~~vi~~~r~~~~---------~~~~~~~~~~~~~~--~~~---v~~~~~D~~~~   77 (214)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+......  ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999987544         23332222222111  113   78899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      +++.+++++    ++++|+|||+||.....      .+.++++..+++|+.++..+++++..    .+.++||++||.+.
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC------cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHHH
Confidence            998877763    55699999999975321      13456889999999999998887643    44578999999654


Q ss_pred             ccCCC------------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          158 VIGGV------------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       158 ~~~~~------------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +....                  ....|+.+|++.+.+++.++.++   |++++.+.|+.+..+.
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            32211                  15689999999999999999886   8999999999997664

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=3e-23  Score=168.81  Aligned_cols=169  Identities=17%  Similarity=0.146  Sum_probs=132.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCc--chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDD--LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +.+..    ..++.++.+|++|++++.+++.   
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED----DPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc----CCceEEEEcCCCCHHHHHHHhh---
Confidence            4579999999999999999999997  88999988642  22222 11111    1357889999999999988873   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc---------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI---------  159 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  159 (214)
                          ++|+|||+||....      +.+.++++..+++|+.++..+++++.+.   ...++||++||.+.+.         
T Consensus        75 ----~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E  141 (336)
T 2hun_A           75 ----KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTE  141 (336)
T ss_dssp             ----TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCT
T ss_pred             ----CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCC
Confidence                79999999997531      1234567889999999999999999886   1236899999975332         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 --GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 --~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                        +.+....|+.+|++.+.+++.++.++   |++++.+.|+.+.++..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          142 NDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             TBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCC
Confidence              23445689999999999999999874   79999999999998874

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=3e-23  Score=170.36  Aligned_cols=172  Identities=22%  Similarity=0.211  Sum_probs=135.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKH-GAKVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|||||+|+||++++++|+++ |++|++++|+.  ...+.+ +.+..    ..++.++.+|++|++++.+++++.    
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE----SNRYNFEHADICDSAEITRIFEQY----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT----CTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc----CCCeEEEECCCCCHHHHHHHHhhc----
Confidence            4999999999999999999998 79999999865  222222 11211    135788999999999999888753    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-----CCeEEEecCCCccc-------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-----RGSIISTASVCGVI-------  159 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~-------  159 (214)
                       ++|+|||+||....      +.+.++++..+++|+.++..+++++.+.|...+     .++||++||.+.+.       
T Consensus        73 -~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~  145 (361)
T 1kew_A           73 -QPDAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             -CCSEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             -CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence             89999999997531      123456889999999999999999999874321     25899999965321       


Q ss_pred             --------------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 --------------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 --------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                    +.+....|+.+|++.+.+++.++.++   |++++.+.||.+.++..
T Consensus       146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence                          12345689999999999999999875   79999999999998874

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=3.6e-23  Score=169.57  Aligned_cols=177  Identities=19%  Similarity=0.080  Sum_probs=137.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC--CCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS--ANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+......  ..++.++.+|++|.+++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            357799999999999999999999999999999999764322211221111000  0257889999999999888876  


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----  162 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----  162 (214)
                           ++|+|||+||.....      .+.+++...+++|+.++..+++++.+    .+.+++|++||.+.+.+.+     
T Consensus       102 -----~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~  166 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP------RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKV  166 (352)
T ss_dssp             -----TCSEEEECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCcccCch------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCC
Confidence                 799999999975311      13456889999999999999988865    3457899999987654332     


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 ------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 ------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                            ....|+.+|++.+.+++.++.++   |++++.+.||.+.++...
T Consensus       167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCC
Confidence                  35689999999999999998875   799999999999988643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.90  E-value=8.5e-23  Score=166.43  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=125.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+.+.    .     .++.++.+|++|++++.++++       +
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~-----~~~~~~~~Dl~d~~~~~~~~~-------~   77 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----Y-----LEPECRVAEMLDHAGLERALR-------G   77 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----G-----GCCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----c-----CCeEEEEecCCCHHHHHHHHc-------C
Confidence            48999999999999999999999999999999876554322    1     146889999999998888776       6


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT----------  163 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  163 (214)
                      +|+|||+||...        ...+++...+++|+.++..+++++.+.    +.+++|++||.+.+...+.          
T Consensus        78 ~d~vih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~  145 (342)
T 2x4g_A           78 LDGVIFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFY  145 (342)
T ss_dssp             CSEEEEC--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCC
T ss_pred             CCEEEECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCC
Confidence            999999999642        134567889999999999999988774    3468999999877654333          


Q ss_pred             ------CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          164 ------SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       164 ------~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                            ...|+.+|++.+.+++.++.   + |++++.+.||.+.++..
T Consensus       146 ~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          146 DSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             SSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCC
T ss_pred             CccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCC
Confidence                  67899999999999999886   3 89999999999998765

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.90  E-value=1.9e-23  Score=160.42  Aligned_cols=150  Identities=19%  Similarity=0.222  Sum_probs=125.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~g~   93 (214)
                      +++||||+|+||++++++|+++|++|+++.|+.+..+..           .++.++.+|++| ++++.++++       +
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~-------~   63 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----------NNVKAVHFDVDWTPEEMAKQLH-------G   63 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----------TTEEEEECCTTSCHHHHHTTTT-------T
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----------CCceEEEecccCCHHHHHHHHc-------C
Confidence            599999999999999999999999999999987654332           257899999999 988887776       7


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-------Ccc
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-------SHA  166 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------~~~  166 (214)
                      +|+||||||...+              ..+++|+.++..+++++    ++.+.+++|++||..+..+.+.       ...
T Consensus        64 ~d~vi~~ag~~~~--------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~  125 (219)
T 3dqp_A           64 MDAIINVSGSGGK--------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKD  125 (219)
T ss_dssp             CSEEEECCCCTTS--------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHH
T ss_pred             CCEEEECCcCCCC--------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccH
Confidence            9999999997531              17888998888877766    3445678999999988876666       779


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      |+.+|++.+.+.+      ...|++++.+.||.+.++...
T Consensus       126 Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~  159 (219)
T 3dqp_A          126 YYIAKHFADLYLT------KETNLDYTIIQPGALTEEEAT  159 (219)
T ss_dssp             HHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCC
T ss_pred             HHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCC
Confidence            9999999998887      357999999999999887543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.90  E-value=1.7e-22  Score=168.19  Aligned_cols=179  Identities=15%  Similarity=0.053  Sum_probs=134.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh----------------hHHHHhhccCCCCCCceEEEee
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE----------------SVCEDISSSSSSANGCSYVHCD   73 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~----------------~~~~~~~~~~~~~~~v~~~~~D   73 (214)
                      ..++.++|||||+|+||++++++|+++|++|++++|......                +....+.....  .++.++.+|
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~~D   85 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGD   85 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC--CceEEEECC
Confidence            457899999999999999999999999999999988643211                01111111111  257889999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC-CeEEEe
Q 044923           74 VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR-GSIIST  152 (214)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~  152 (214)
                      ++|++++.++++..     ++|+|||+||.....   ....+.+++...+++|+.++..+++++.+.    +. .++|++
T Consensus        86 l~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~  153 (404)
T 1i24_A           86 ICDFEFLAESFKSF-----EPDSVVHFGEQRSAP---YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKL  153 (404)
T ss_dssp             TTSHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEE
T ss_pred             CCCHHHHHHHHhcc-----CCCEEEECCCCCCcc---chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEe
Confidence            99999999888755     699999999975321   112256778889999999999999888664    22 489999


Q ss_pred             cCCCccc------------------------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          153 ASVCGVI------------------------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       153 sS~~~~~------------------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ||.+.+.                        +......|+.+|++.+.+++.++.++   |++++.+.||.+.+|..
T Consensus       154 SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          154 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             CcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            9975432                        22235689999999999999998876   89999999999998754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=5.6e-23  Score=167.44  Aligned_cols=175  Identities=18%  Similarity=0.105  Sum_probs=128.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..+..... ........++.++.+|++|++++.++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL-LDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH-HTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH-HhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            4689999999999999999999999999999988887644332221 1110000146788999999998887775     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC--------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV--------  162 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------  162 (214)
                        ++|+|||+|+...     ....  +.....+++|+.++..+++++.+..   ..++||++||.++..+.+        
T Consensus        77 --~~d~Vih~A~~~~-----~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E  144 (337)
T 2c29_D           77 --GCTGVFHVATPMD-----FESK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDE  144 (337)
T ss_dssp             --TCSEEEECCCCCC-----SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECT
T ss_pred             --CCCEEEEeccccC-----CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCc
Confidence              6899999998642     1111  2235689999999999999887753   146899999987544221        


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 --------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 --------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                    ....|+.||++.+.+++.++.+   .|++++.+.|+.+.+|...
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSC
T ss_pred             ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCC
Confidence                          2236999999999988877654   4899999999999998754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=4.1e-23  Score=161.22  Aligned_cols=167  Identities=14%  Similarity=0.079  Sum_probs=126.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++|+++||||+|+||++++++|+++  |++|+++.|+.+..+.+       .   .++.++.+|++|++++.++++   
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~---~~~~~~~~D~~d~~~~~~~~~---   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------G---GEADVFIGDITDADSINPAFQ---   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------T---CCTTEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------C---CCeeEEEecCCCHHHHHHHHc---
Confidence            35689999999999999999999999  89999999986543322       1   256789999999999988876   


Q ss_pred             HHcCCccEEEeCCcccCCCCC-------CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKP-------NILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG  161 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  161 (214)
                          ++|+||||||.......       ...+...+++...+++|+.++..+++++.+    .+.++||++||..+..+.
T Consensus        69 ----~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~  140 (253)
T 1xq6_A           69 ----GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPD  140 (253)
T ss_dssp             ----TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTT
T ss_pred             ----CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCC
Confidence                68999999997642110       001122344567889999998888777654    345789999998876544


Q ss_pred             CCCcc-----chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 VTSHA-----YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 ~~~~~-----y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +....     |+.+|++++.+.+.       .|++++.+.||.+.++..
T Consensus       141 ~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          141 HPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCS
T ss_pred             CccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCc
Confidence            43333     55689998887652       689999999999998763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.89  E-value=4.5e-23  Score=166.74  Aligned_cols=172  Identities=16%  Similarity=0.115  Sum_probs=121.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+..+... .+........++.++.+|++|++++.++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999998888 543211111 111110000135678899999999888876      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHH-HHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-------  163 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  163 (214)
                       ++|+|||+|+...        ...++ ++..+++|+.|++.+++++.+..   +.++||++||.++..+.+.       
T Consensus        74 -~~d~vih~A~~~~--------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPID--------FAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCccc--------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCC
Confidence             6899999997421        11222 45689999999999998876541   3578999999875432211       


Q ss_pred             ---------------CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          164 ---------------SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       164 ---------------~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                     ...|+.||++.+.+++.++.+   .|++++.+.||.+.+|+..
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCS
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCC
Confidence                           116999999877776665543   5899999999999998754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.89  E-value=1.2e-22  Score=167.09  Aligned_cols=171  Identities=19%  Similarity=0.168  Sum_probs=125.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHH--cCCeEEEEecCCcchh-------hHHHHhhccCCCCCCceEEEeeCCCH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSK--HGAKVLIADIKDDLGE-------SVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~--~g~~vi~~~r~~~~~~-------~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      |.+++++|++|||||+|+||++++++|++  +|++|++++|+.....       ..... ...  ...++.++.+|++|+
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~   80 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHF-KNL--IGFKGEVIAADINNP   80 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCG-GGG--TTCCSEEEECCTTCH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhh-hhc--cccCceEEECCCCCH
Confidence            44578899999999999999999999999  9999999998764211       10111 111  112578899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      ++++++      ...++|+|||+||....        +.++++..+++|+.++..+++++..    .+ ++||++||.+.
T Consensus        81 ~~~~~~------~~~~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~~~V~~SS~~v  141 (362)
T 3sxp_A           81 LDLRRL------EKLHFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIARS----KK-AKVIYASSAGV  141 (362)
T ss_dssp             HHHHHH------TTSCCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGG
T ss_pred             HHHHHh------hccCCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEeCcHHH
Confidence            988876      23589999999996532        2345789999999999998888743    22 45999999544


Q ss_pred             ccCCC----------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          158 VIGGV----------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       158 ~~~~~----------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +...+          ....|+.+|++.+.+++.++.+     +++..+.|+.+..|.
T Consensus       142 yg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~  193 (362)
T 3sxp_A          142 YGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPR  193 (362)
T ss_dssp             GCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTT
T ss_pred             hCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcC
Confidence            32211          2345999999999999988766     566666676666544

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.89  E-value=4.2e-22  Score=162.75  Aligned_cols=172  Identities=13%  Similarity=0.153  Sum_probs=131.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc------hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL------GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +|++|||||+|+||++++++|+++|++|++++|+...      .++..+.+....+  .++.++.+|++|++++.+++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccC--CceEEEECCCCCHHHHHHHHHh
Confidence            4789999999999999999999999999999886543      2222333322111  2578899999999999888765


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC------
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG------  160 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  160 (214)
                      .     ++|+|||+||.....      ...+++...+++|+.++..+++++.    +.+.++||++||.+.+..      
T Consensus        80 ~-----~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           80 Y-----SFMAVIHFAGLKAVG------ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             C-----CEEEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             c-----CCCEEEECCCCcCcc------chhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCc
Confidence            2     799999999975321      1345678899999999998887654    345578999999765421      


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          161 ------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       161 ------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                            .|....|+.+|++.+.+++.++.+  ..++++..+.|+.+..+
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence                  123678999999999999999987  34699999999888765

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.89  E-value=1.5e-22  Score=163.08  Aligned_cols=164  Identities=18%  Similarity=0.225  Sum_probs=128.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|+||++++++|+++|++|++++|......   +.+.      ..+.++.+|++|++++.+++++.     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~------~~~~~~~~Dl~~~~~~~~~~~~~-----~~   67 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVP------KGVPFFRVDLRDKEGVERAFREF-----RP   67 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSC------TTCCEECCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcc------cCeEEEECCCCCHHHHHHHHHhc-----CC
Confidence            5999999999999999999999999999988543211   1111      14678899999999998888652     78


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------------
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------------  161 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------  161 (214)
                      |++||+|+....      ..+.+++...+++|+.+++.+++++.+    .+.+++|++||.++.++.             
T Consensus        68 d~vi~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~  137 (311)
T 2p5y_A           68 THVSHQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPP  137 (311)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCC
T ss_pred             CEEEECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCC
Confidence            999999996431      123566889999999999999888754    345689999997222211             


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      .....|+.+|++.+.+++.++.++   |++++.+.|+.+.+|..
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          138 RPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence            235689999999999999998875   79999999999988764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=7.5e-23  Score=161.65  Aligned_cols=152  Identities=20%  Similarity=0.218  Sum_probs=124.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||+|+||++++++|+++|++|++++|+.+...      .      .++.++.+|++|++++.++++       +
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~------~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------E------AHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------C------TTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------C------CCccEEEccCCCHHHHHHHHc-------C
Confidence            68999999999999999999999999999999865321      0      146788999999999888876       6


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  162 (214)
                      +|+||||||...          .+++...+++|+.++..+++++.+    .+.++||++||...+...+           
T Consensus        64 ~d~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~  129 (267)
T 3ay3_A           64 CDGIIHLGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPR  129 (267)
T ss_dssp             CSEEEECCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCC
T ss_pred             CCEEEECCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCC
Confidence            899999999751          123678999999999999888765    3457899999987654332           


Q ss_pred             -CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          163 -TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       163 -~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                       ....|+.+|++.+.+++.++.   ..|++++.+.||.+.
T Consensus       130 ~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~  166 (267)
T 3ay3_A          130 RPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCF  166 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCS
T ss_pred             CCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeec
Confidence             246899999999999998865   458999999999983

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=1.9e-22  Score=164.57  Aligned_cols=171  Identities=19%  Similarity=0.226  Sum_probs=132.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC-------CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG-------AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIEN   82 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~   82 (214)
                      .++++++|||||+|+||++++++|+++|       ++|++++|+.+....      .   ...++.++.+|++|++++.+
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~---~~~~~~~~~~Dl~d~~~~~~   81 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G---FSGAVDARAADLSAPGEAEK   81 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T---CCSEEEEEECCTTSTTHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c---cCCceeEEEcCCCCHHHHHH
Confidence            4788999999999999999999999999       789999987654322      0   11257889999999999888


Q ss_pred             HHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCC
Q 044923           83 AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGG  161 (214)
Q Consensus        83 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~  161 (214)
                      +++      +++|+|||+||....       .+.+++...+++|+.++..+++++.+...+. +.++||++||.+.+.+.
T Consensus        82 ~~~------~~~d~vih~A~~~~~-------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~  148 (342)
T 2hrz_A           82 LVE------ARPDVIFHLAAIVSG-------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP  148 (342)
T ss_dssp             HHH------TCCSEEEECCCCCHH-------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred             HHh------cCCCEEEECCccCcc-------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence            775      389999999997531       2356789999999999999999887754221 14689999998665432


Q ss_pred             -C----------CCccchhhHHHHHHHHHHHHHHH--ccCCcEEEEEe--CCcccC
Q 044923          162 -V----------TSHAYTSSKHGVVGLMKNTAVEL--GRFGIRVNCVS--PYAVSS  202 (214)
Q Consensus       162 -~----------~~~~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~--Pg~v~t  202 (214)
                       +          ....|+.+|++.+.+++.++.+.  ....+|++.+.  ||...+
T Consensus       149 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          149 LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred             CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc
Confidence             1          45689999999999999988763  22346777777  887654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.88  E-value=9.1e-22  Score=160.72  Aligned_cols=176  Identities=14%  Similarity=0.101  Sum_probs=127.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +.++++++|||||||+||++++++|+++|  ++|+..+|.....  ....+.... ...++.++.+|++|++++.++++.
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhh
Confidence            34678999999999999999999999999  6677777654211  111121111 113688999999999999999885


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC----
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV----  162 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----  162 (214)
                      .     ++|+|||+||....      ....+++...+++|+.++..+++++.+    .+.+++|++||.+.+...+    
T Consensus        97 ~-----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~  161 (346)
T 4egb_A           97 R-----DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGR  161 (346)
T ss_dssp             H-----TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCC
T ss_pred             c-----CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCC
Confidence            3     69999999997642      224567788999999999888887755    3456899999975543321    


Q ss_pred             --------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 --------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 --------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                              ....|+.+|.+.+.+++.++.++   |++++.+.|+.+..+..
T Consensus       162 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          162 FTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCC
Confidence                    23689999999999999998874   89999999999988754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=9.9e-22  Score=161.91  Aligned_cols=174  Identities=13%  Similarity=0.054  Sum_probs=124.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhccC-CCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISSSS-SSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.... ....++.++.+|++|++++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999998764321 1111111100 00125788899999999999988765   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG----------  160 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  160 (214)
                        ++|+||||||....      ..+.+++...+++|+.++..+++++.+...+ +.+++|++||.+.+..          
T Consensus        78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              78999999997532      1234457889999999999999998876543 2478999999765432          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          161 -GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       161 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                       ......|+.+|++.+.+++.++.++   |+.+..+.|..+.
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~  187 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHE  187 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCcc
Confidence             1235689999999999999999875   5665555554443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.88  E-value=5.6e-22  Score=162.00  Aligned_cols=166  Identities=18%  Similarity=0.194  Sum_probs=130.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      |++|||||+|+||++++++|+++  |++|++++|+.... .+..+.+.   .  .++.++.+|++|++++.++++     
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~---~--~~~~~~~~Dl~d~~~~~~~~~-----   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL---G--DRVELVVGDIADAELVDKLAA-----   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC---S--SSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc---c--CCeEEEECCCCCHHHHHHHhh-----
Confidence            68999999999999999999999  89999999865321 11111111   1  257889999999999888876     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  159 (214)
                        .+|+|||+||....      +.+.++++..+++|+.++..+++++.+.    + +++|++||.+.+.           
T Consensus        75 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 --KADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             --TCSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             --cCCEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccc
Confidence              56999999997531      1234567889999999999999998875    2 3899999965331           


Q ss_pred             ------------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 ------------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 ------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                  +.+....|+.+|++.+.+++.++.++   |++++.+.||.+.++..
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCC
Confidence                        22345689999999999999999875   79999999999998764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.88  E-value=4.6e-22  Score=162.79  Aligned_cols=176  Identities=16%  Similarity=0.074  Sum_probs=138.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC--CCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS--ANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++|++|||||||+||++++++|+++|++|+++.|+..........+......  ..++.++.+|++|++++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            457899999999999999999999999999999999776554444444332110  0257899999999999888876  


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----  162 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----  162 (214)
                           ++|+|||+||....      ....+++...+++|+.++..+++++..    .+.+++|++||.+.+...+     
T Consensus       100 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~  164 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKV  164 (351)
T ss_dssp             -----TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             -----CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCc
Confidence                 79999999996432      123456788999999999988887754    3456899999976553322     


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 ------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 ------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                            ....|+.+|.+.+.+++.++.++   |++++.+.|+.+..+..
T Consensus       165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCC
Confidence                  24689999999999999998875   79999999999988754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.88  E-value=1.5e-22  Score=163.07  Aligned_cols=162  Identities=18%  Similarity=0.162  Sum_probs=129.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +++|||||+|+||++++++|+++|++|++++|+.+......         ...+.++.+|++|.+ +.++++       .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~Dl~d~~-~~~~~~-------~   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---------NPSAELHVRDLKDYS-WGAGIK-------G   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---------CTTSEEECCCTTSTT-TTTTCC-------C
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---------CCCceEEECccccHH-HHhhcC-------C
Confidence            46999999999999999999999999999999776543322         125788999999987 665544       3


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------CC
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------GV  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~  162 (214)
                       |+|||+||...      ...+.+++...+++|+.++..+++++..    .+.+++|++||.+.+..           ..
T Consensus        64 -d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  132 (312)
T 3ko8_A           64 -DVVFHFAANPE------VRLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYK  132 (312)
T ss_dssp             -SEEEECCSSCS------SSGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             -CEEEECCCCCC------chhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCC
Confidence             99999999642      2334556888999999999998888744    34568999999765521           23


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ....|+.+|++.+.+++.++.++   |++++.+.||.+.+|...
T Consensus       133 p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          133 PISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLR  173 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCC
Confidence            35789999999999999999886   899999999999988643

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.88  E-value=6.3e-22  Score=163.95  Aligned_cols=167  Identities=19%  Similarity=0.140  Sum_probs=132.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+++++|||||+|+||++++++|+++|++|++++|+.+......    .     .++.++.+|++|++++.++++     
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-----~~v~~~~~Dl~d~~~~~~~~~-----   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----M-----FCDEFHLVDLRVMENCLKVTE-----   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----G-----TCSEEEECCTTSHHHHHHHHT-----
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc----c-----CCceEEECCCCCHHHHHHHhC-----
Confidence            35689999999999999999999999999999999865432211    0     257889999999999888775     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------  159 (214)
                        ++|+|||+||.....     ....+++...+++|+.++..+++++..    .+.+++|++||.+.+.           
T Consensus        93 --~~d~Vih~A~~~~~~-----~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~  161 (379)
T 2c5a_A           93 --GVDHVFNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVS  161 (379)
T ss_dssp             --TCSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCE
T ss_pred             --CCCEEEECceecCcc-----cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCC
Confidence              799999999975321     001235788999999999998888754    3456899999976543           


Q ss_pred             -------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 -------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 -------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                             +......|+.+|++.+.+++.++.++   |++++.+.||.+.++..
T Consensus       162 ~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          162 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             cCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence                   22235689999999999999998764   79999999999998754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.88  E-value=1.5e-22  Score=164.95  Aligned_cols=169  Identities=20%  Similarity=0.193  Sum_probs=123.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH--HHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC--EDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..+...  ..+..    ..++.++.+|++|++++.++++     
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE----LGDLKIFRADLTDELSFEAPIA-----   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG----GSCEEEEECCTTTSSSSHHHHT-----
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC----CCcEEEEecCCCChHHHHHHHc-----
Confidence            689999999999999999999999999998888765433221  12211    1247788999999998887775     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHH-HHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC--------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAE-FERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------  161 (214)
                        ++|+|||+|+....        ..++ .++.+++|+.|+..+++++.+..   +.++||++||.++..+.        
T Consensus        80 --~~D~Vih~A~~~~~--------~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~  146 (338)
T 2rh8_A           80 --GCDFVFHVATPVHF--------ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLV  146 (338)
T ss_dssp             --TCSEEEEESSCCCC-----------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCC
T ss_pred             --CCCEEEEeCCccCC--------CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcc
Confidence              68999999985421        1222 34589999999999999887642   24689999997632210        


Q ss_pred             -------------C---CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 -------------V---TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 -------------~---~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                   +   ....|+.||++.+.+++.++.+   .|++++.+.|+.+.+|...
T Consensus       147 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          147 VDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             CCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSS
T ss_pred             cChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCC
Confidence                         0   1126999999999888877654   4899999999999998754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=1.2e-21  Score=159.98  Aligned_cols=156  Identities=15%  Similarity=0.128  Sum_probs=125.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+.++|++|||||+|+||++++++|+++|++|++++|+.+.               .++.++.+|++|.+++.++++   
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHHHh---
Confidence            35788999999999999999999999999999999998653               157889999999999988876   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC--------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--------  160 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------  160 (214)
                          ++|+|||+|+....        +.++++..+++|+.++..+++++.+    .+.++||++||.+.+..        
T Consensus        77 ----~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~  140 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPV  140 (347)
T ss_dssp             ----TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSB
T ss_pred             ----CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCc
Confidence                79999999997532        2345689999999999888887754    44568999999654322        


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCccc
Q 044923          161 -----GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVS  201 (214)
Q Consensus       161 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~  201 (214)
                           ......|+.+|.+.+.+++.++.+   .|++++.+.|+.+.
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~  183 (347)
T 4id9_A          141 TEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ  183 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence                 234568999999999999999877   48999999999998

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=5.6e-22  Score=152.84  Aligned_cols=156  Identities=12%  Similarity=0.010  Sum_probs=124.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +++|||||+|+||++++++|+++|++|++++|+.+..+...          ..+.++.+|++|++++.++++       +
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~Dl~d~~~~~~~~~-------~   67 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN----------EHLKVKKADVSSLDEVCEVCK-------G   67 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC----------TTEEEECCCTTCHHHHHHHHT-------T
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc----------CceEEEEecCCCHHHHHHHhc-------C
Confidence            68999999999999999999999999999999876543321          257899999999999988877       6


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC----------C
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV----------T  163 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~  163 (214)
                      +|+|||+||....            ....+++|+.++..+++++.+    .+.+++|++||.+...+.+          .
T Consensus        68 ~d~vi~~a~~~~~------------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p  131 (227)
T 3dhn_A           68 ADAVISAFNPGWN------------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVP  131 (227)
T ss_dssp             CSEEEECCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSC
T ss_pred             CCEEEEeCcCCCC------------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcch
Confidence            8999999986421            112688898887777766644    4556899999987765443          2


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ...|+.+|++.+.+.+.++.+   .|++++.+.||.+.++..
T Consensus       132 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~  170 (227)
T 3dhn_A          132 ENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGV  170 (227)
T ss_dssp             GGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCc
Confidence            568999999999988888763   589999999999987653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=2.1e-21  Score=160.29  Aligned_cols=175  Identities=15%  Similarity=0.027  Sum_probs=130.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhccCC--CCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISSSSS--SANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      |++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.....  ...++.++.+|++|++++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            68999999999999999999999999999998764311 11111110000  0125788999999999999888765   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC----------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG----------  160 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  160 (214)
                        ++|+|||+||....      ..+.++++..+++|+.++..+++++.+...+ +.++||++||.+.+..          
T Consensus       102 --~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccC
Confidence              78999999997431      1134668899999999999999998876542 2368999999766532          


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          161 -GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       161 -~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                       ......|+.+|++.+.+++.++.++   |+.+..+.|+.+..|
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  213 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence             1235689999999999999999875   677777777655443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.87  E-value=2.3e-21  Score=157.83  Aligned_cols=161  Identities=17%  Similarity=0.149  Sum_probs=120.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++++++|||||+|+||++++++|+++|++|++++|+.....+.   +...    .++.++.+|++|++++.++++..  
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~----~~~~~~~~Dl~d~~~~~~~~~~~--   88 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH----PNLTFVEGSIADHALVNQLIGDL--   88 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC----TTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc----CCceEEEEeCCCHHHHHHHHhcc--
Confidence            46789999999999999999999999999999999976432211   1111    25788999999999999888752  


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc----C-----
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI----G-----  160 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~-----  160 (214)
                         ++|+|||+||.....       +.++++  +++|+.++..+++++.+    .+.++||++||.+.+.    .     
T Consensus        89 ---~~D~vih~A~~~~~~-------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~  152 (333)
T 2q1w_A           89 ---QPDAVVHTAASYKDP-------DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRL  152 (333)
T ss_dssp             ---CCSEEEECCCCCSCT-------TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCT
T ss_pred             ---CCcEEEECceecCCC-------ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCc
Confidence               799999999975421       234455  99999999999998876    3457899999976543    2     


Q ss_pred             ----CCCCccchhhHHHHHHHHHH-HHHHHccCCcEEEEEeCCcccCc
Q 044923          161 ----GVTSHAYTSSKHGVVGLMKN-TAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       161 ----~~~~~~y~~sK~a~~~l~~~-la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                          .|....|+.+|++.+.+++. ++        ++..+.|+.+..|
T Consensus       153 ~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp  192 (333)
T 2q1w_A          153 DHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGP  192 (333)
T ss_dssp             TSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEEST
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECc
Confidence                22227899999999999887 65        4455666655544

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.87  E-value=5.3e-22  Score=160.07  Aligned_cols=161  Identities=18%  Similarity=0.209  Sum_probs=124.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||+|+||++++++|+++|..|++..++....+..          ...+.++.+|++| +++.++++       +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~Dl~~-~~~~~~~~-------~   63 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV----------NEAARLVKADLAA-DDIKDYLK-------G   63 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS----------CTTEEEECCCTTT-SCCHHHHT-------T
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc----------CCCcEEEECcCCh-HHHHHHhc-------C
Confidence            5799999999999999999999995455544444332211          1257889999999 88877776       7


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------CCC
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------GGV  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~  162 (214)
                      +|++||+|+...      ...+.++++..+++|+.++..+++++..    .+.+++|++||.+.+.           +..
T Consensus        64 ~d~vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~  133 (313)
T 3ehe_A           64 AEEVWHIAANPD------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTH  133 (313)
T ss_dssp             CSEEEECCCCCC------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCCCCC------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCC
Confidence            999999999642      2334556889999999999988887543    4457899999976542           333


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ....|+.+|.+.+.+++.++.++   |++++.+.|+.+.++..
T Consensus       134 ~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~  173 (313)
T 3ehe_A          134 PISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRS  173 (313)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCC
Confidence            45689999999999999999875   89999999999988743

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.87  E-value=9e-22  Score=162.85  Aligned_cols=169  Identities=13%  Similarity=0.102  Sum_probs=131.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.+...+   .+.    ...++.++.+|++|++++.++++   
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~----~~~~v~~~~~Dl~d~~~l~~~~~---   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP----DHPAVRFSETSITDDALLASLQD---   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC----CCTTEEEECSCTTCHHHHHHCCS---
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc----CCCceEEEECCCCCHHHHHHHhh---
Confidence            4788999999999999999999999999 999999987654321   111    01257889999999988877665   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCccc--------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVI--------  159 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~--------  159 (214)
                          ++|+|||+||....      ..+.+++...+++|+.++..+++++    ++. +.+++|++||.+.+.        
T Consensus        99 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~  164 (377)
T 2q1s_A           99 ----EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAK  164 (377)
T ss_dssp             ----CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC------------
T ss_pred             ----CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcC
Confidence                89999999997532      1234567889999999988887766    334 456899999975421        


Q ss_pred             --------CC-CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 --------GG-VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 --------~~-~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                              +. .....|+.+|++.+.+++.++.++   |++++.+.||.+.++..
T Consensus       165 ~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          165 ATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             --CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             cccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence                    21 345689999999999999998775   89999999999988764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.87  E-value=7.5e-22  Score=153.37  Aligned_cols=149  Identities=14%  Similarity=0.065  Sum_probs=106.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +..|++|||||+||||++++++|+++| ++|+++.|+.+.++...         ..++.++++|++|++++.++++    
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY---------PTNSQIIMGDVLNHAALKQAMQ----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC---------CTTEEEEECCTTCHHHHHHHHT----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc---------cCCcEEEEecCCCHHHHHHHhc----
Confidence            445899999999999999999999999 89999999876543321         1257889999999999998887    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc---
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA---  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~---  166 (214)
                         ++|+||||+|...          .              ...++.+++.+++.+.++||++||.....+.+....   
T Consensus        88 ---~~D~vv~~a~~~~----------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~  140 (236)
T 3qvo_A           88 ---GQDIVYANLTGED----------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWN  140 (236)
T ss_dssp             ---TCSEEEEECCSTT----------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC------------
T ss_pred             ---CCCEEEEcCCCCc----------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccch
Confidence               7899999998411          1              133567888888888889999999887665443211   


Q ss_pred             ------chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          167 ------YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       167 ------y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                            +...+...       ...+.+.||+++.|.||++.++...
T Consensus       141 ~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~  179 (236)
T 3qvo_A          141 NAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDII  179 (236)
T ss_dssp             ----CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCC
T ss_pred             hhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCc
Confidence                  11122211       1223467999999999999887543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=2.9e-21  Score=157.00  Aligned_cols=173  Identities=14%  Similarity=0.062  Sum_probs=129.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .-.++++|||||+|+||++++++|+++|++|++++|+.+... ...+.+..    ..++.++.+|++|++++.++++.. 
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~-   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADACSVQRAVIKA-   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccc----cCceEEEECCCCCHHHHHHHHHHc-
Confidence            345789999999999999999999999999999999765432 11121111    125788999999999999888765 


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCC-----
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGV-----  162 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~-----  162 (214)
                          ++|+|||+||.....      .+.+++...+++|+.++..+++++.+.    + .+++|++||.+.+...+     
T Consensus        86 ----~~d~Vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~  151 (335)
T 1rpn_A           86 ----QPQEVYNLAAQSFVG------ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQD  151 (335)
T ss_dssp             ----CCSEEEECCSCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBC
T ss_pred             ----CCCEEEECccccchh------hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCC
Confidence                789999999964311      112346889999999999998887654    3 26899999976543221     


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 ------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 ------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                            ....|+.+|++.+.+++.++.++   |+++..+.|+.+..|.
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~  196 (335)
T 1rpn_A          152 ENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  196 (335)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             cccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCC
Confidence                  24579999999999999998775   6788888887776553

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.87  E-value=1.9e-21  Score=158.27  Aligned_cols=166  Identities=18%  Similarity=0.185  Sum_probs=129.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---C---CeEEEEecCCcc--hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKH---G---AKVLIADIKDDL--GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~---g---~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+..    ..++.++.+|++|++++.+++  
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~--   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDA----DPRLRFVHGDIRDAGLLAREL--   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTT----CTTEEEEECCTTCHHHHHHHT--
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhccc----CCCeEEEEcCCCCHHHHHHHh--
Confidence            5999999999999999999997   8   899999886421  1111 11111    125788999999999888776  


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-------
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-------  159 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  159 (214)
                           +++|+|||+||....      +.+.++++..+++|+.++..+++++.+.    +.++||++||.+.+.       
T Consensus        75 -----~~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~  139 (337)
T 1r6d_A           75 -----RGVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSW  139 (337)
T ss_dssp             -----TTCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCB
T ss_pred             -----cCCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCC
Confidence                 389999999996531      1234567889999999999999988774    346899999965432       


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 ----GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 ----~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                          +......|+.+|++.+.+++.++.++   |++++.+.|+.+.++..
T Consensus       140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          140 TESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence                22345689999999999999998875   79999999999988764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.87  E-value=3.6e-21  Score=156.12  Aligned_cols=164  Identities=15%  Similarity=0.194  Sum_probs=129.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |++|||||+|+||++++++|+++|++|++++|+.....   +.+.      .++.++.+|++|++++.+++++     .+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~------~~~~~~~~D~~~~~~~~~~~~~-----~~   67 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT------EGAKFYNGDLRDKAFLRDVFTQ-----EN   67 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC------TTSEEEECCTTCHHHHHHHHHH-----SC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC------CCcEEEECCCCCHHHHHHHHhh-----cC
Confidence            57999999999999999999999999999998764332   1111      1478899999999998888765     37


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------CC
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------GV  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~  162 (214)
                      +|+|||+||.....      .+.+++...+++|+.++..+++++..    .+.+++|++||.+.+..           ..
T Consensus        68 ~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~  137 (330)
T 2c20_A           68 IEAVMHFAADSLVG------VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTN  137 (330)
T ss_dssp             EEEEEECCCCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCcccCcc------ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCC
Confidence            99999999975321      13456889999999999988887643    34578999999765432           12


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ....|+.+|++.+.+++.++.++   |++++.+.|+.+..+.
T Consensus       138 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          138 PTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            35689999999999999998764   8999999999888764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.87  E-value=7.6e-22  Score=165.86  Aligned_cols=172  Identities=15%  Similarity=0.117  Sum_probs=128.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc---chhhHHHHhhccCC------CCCCceEEEeeCCCHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD---LGESVCEDISSSSS------SANGCSYVHCDVTKEKDI   80 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~---~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~~   80 (214)
                      ...+|++|||||+|+||++++++|+++|++|+++.|+.+   ..+.+.+.+.....      ...++.++.+|++|++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356789999999999999999999999999999999887   33333333322110      013688999999998887


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc--c
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG--V  158 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~  158 (214)
                      .        .++++|+||||||...         ..+++...+++|+.++..+++++.+     +..++|++||...  .
T Consensus       146 ~--------~~~~~d~Vih~A~~~~---------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~  203 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD---------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTY  203 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSE
T ss_pred             C--------CcCCCCEEEECCcccC---------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCC
Confidence            7        4568999999999753         2346788999999999999998877     3468999999876  0


Q ss_pred             ----------------cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          159 ----------------IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       159 ----------------~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                                      .+......|+.+|.+.+.+++.++.    .|++++.+.||.|.++....
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSC
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCC
Confidence                            0122567899999999999998753    58999999999999876544

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.87  E-value=4.9e-21  Score=155.90  Aligned_cols=169  Identities=17%  Similarity=0.168  Sum_probs=124.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+....+  .++.++.+|++|++++.++++..     ++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC--CcceEEEccCCCHHHHHHHhhcc-----CC
Confidence            699999999999999999999999999988754322222222222111  24678899999999998887642     69


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------C-C
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------G-V  162 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~-~  162 (214)
                      |+|||+||.....      ...+++...+++|+.++..+++++.    +.+.++||++||.+.+..           . |
T Consensus        75 D~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  144 (338)
T 1udb_A           75 DTVIHFAGLKAVG------ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDNPKIPYVESFPTGT  144 (338)
T ss_dssp             SEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             CEEEECCccCccc------cchhcHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence            9999999964311      1234567889999999998887653    334578999999765421           1 2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      ....|+.+|++.+.+++.++.+.  .|+++..+.|+.+..
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G  182 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVG  182 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEEC
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecC
Confidence            36789999999999999999873  378888888765543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.87  E-value=3.6e-21  Score=145.82  Aligned_cols=148  Identities=17%  Similarity=0.125  Sum_probs=114.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +++++||||+|+||++++++|+++|++|+++.|+.+..+...         ..++.++.+|++|++++.++++       
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG---------PRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS---------CCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc---------CCceEEEEecCCCHHHHHHHHc-------
Confidence            378999999999999999999999999999999875543210         1257889999999999888776       


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC----CCccch
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV----TSHAYT  168 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----~~~~y~  168 (214)
                      ++|++||+||.....     +.        .++|+.++..+++++.+    .+.+++|++||.......+    ....|+
T Consensus        67 ~~d~vi~~a~~~~~~-----~~--------~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~  129 (206)
T 1hdo_A           67 GQDAVIVLLGTRNDL-----SP--------TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVT  129 (206)
T ss_dssp             TCSEEEECCCCTTCC-----SC--------CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHH
T ss_pred             CCCEEEECccCCCCC-----Cc--------cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHH
Confidence            689999999975421     10        13677776666665543    4457899999986654443    457899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAV  200 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v  200 (214)
                      .+|++++.+.+       ..|++++.+.||.+
T Consensus       130 ~~K~~~e~~~~-------~~~i~~~~lrp~~~  154 (206)
T 1hdo_A          130 DDHIRMHKVLR-------ESGLKYVAVMPPHI  154 (206)
T ss_dssp             HHHHHHHHHHH-------HTCSEEEEECCSEE
T ss_pred             HHHHHHHHHHH-------hCCCCEEEEeCCcc
Confidence            99999998874       25899999999998

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=2.9e-21  Score=155.41  Aligned_cols=162  Identities=17%  Similarity=0.135  Sum_probs=128.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|++|||||+|+||++++++|+++  |++|++++|+....+ .    ..      ++.++.+|++|++++.+++++.   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~~------~~~~~~~D~~d~~~~~~~~~~~---   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----VN------SGPFEVVNALDFNQIEHLVEVH---   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----HH------SSCEEECCTTCHHHHHHHHHHT---
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----cC------CCceEEecCCCHHHHHHHHhhc---
Confidence            367999999999999999999999  899999998765421 1    11      3578899999999998887754   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  161 (214)
                        ++|+|||+||.....       ..+++...+++|+.++..+++++.+    .+.+++|++||.+.+...         
T Consensus        68 --~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~  134 (312)
T 2yy7_A           68 --KITDIYLMAALLSAT-------AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQY  134 (312)
T ss_dssp             --TCCEEEECCCCCHHH-------HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSS
T ss_pred             --CCCEEEECCccCCCc-------hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCcccc
Confidence              799999999975321       2356788999999999888887754    345689999997655321         


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 ---VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ---~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                         .....|+.+|.+.+.+++.++.++   |++++.+.|+.+..+.
T Consensus       135 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          135 TIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             CBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred             CcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence               124689999999999999998765   7999999999988753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.86  E-value=4e-21  Score=147.65  Aligned_cols=149  Identities=8%  Similarity=0.004  Sum_probs=114.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||||+||++++++|+++|++|+++.|+.+..+.+.    .     .++.++.+|++|+++         +.++++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~-----~~~~~~~~D~~d~~~---------~~~~~~   63 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----G-----ATVATLVKEPLVLTE---------ADLDSV   63 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----C-----TTSEEEECCGGGCCH---------HHHTTC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----C-----CCceEEecccccccH---------hhcccC
Confidence            4999999999999999999999999999999876543321    1     257899999999887         233589


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-----------
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-----------  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----------  163 (214)
                      |+||||||.....     .        ..++|+    ..++.+++.+++.+ +++|++||.++..+.+.           
T Consensus        64 d~vi~~ag~~~~~-----~--------~~~~n~----~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~  125 (224)
T 3h2s_A           64 DAVVDALSVPWGS-----G--------RGYLHL----DFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPES  125 (224)
T ss_dssp             SEEEECCCCCTTS-----S--------CTHHHH----HHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGG
T ss_pred             CEEEECCccCCCc-----c--------hhhHHH----HHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCC
Confidence            9999999986211     0        023455    44567788888887 99999999877665443           


Q ss_pred             ---CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          164 ---SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       164 ---~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                         ...|+.+|++.+.+ +.   .....|++++.+.||.+.++
T Consensus       126 ~~~~~~y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          126 AASQPWYDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPS  164 (224)
T ss_dssp             GGGSTTHHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCC
T ss_pred             CccchhhHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCC
Confidence               57899999988844 22   22357999999999999987

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.86  E-value=1.3e-20  Score=156.00  Aligned_cols=158  Identities=16%  Similarity=0.025  Sum_probs=122.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-----hhhHHHHhhccCCCCC-CceEEEeeCCCHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-----GESVCEDISSSSSSAN-GCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-----~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++.+......   ... ++.++.+|++|.+++.++++.+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN---VNKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc---ccccceEEEECCCCCHHHHHHHHHhc
Confidence            789999999999999999999999999999997654     2221111110   011 5788999999999999888765


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCccc-------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVI-------  159 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~-------  159 (214)
                           ++|+|||+||....      ..+.+++...+++|+.++..+++++.+...++ +.+++|++||.+.+.       
T Consensus       106 -----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~  174 (381)
T 1n7h_A          106 -----KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  174 (381)
T ss_dssp             -----CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             -----CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCC
Confidence                 78999999997532      12346688999999999999999999876442 246899999976543       


Q ss_pred             ---CCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 ---GGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ---~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                         +......|+.+|++.+.+++.++.++
T Consensus       175 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~  203 (381)
T 1n7h_A          175 ETTPFHPRSPYAASKCAAHWYTVNYREAY  203 (381)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHh
Confidence               22345689999999999999999876

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.86  E-value=1.5e-20  Score=143.93  Aligned_cols=148  Identities=11%  Similarity=0.113  Sum_probs=110.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||||+||++++++|+++|++|+++.|+.+..+.+.          ..+.++.+|++|+++  +       .++++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------~~~~~~~~D~~d~~~--~-------~~~~~   62 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----------KDINILQKDIFDLTL--S-------DLSDQ   62 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----------SSSEEEECCGGGCCH--H-------HHTTC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----------CCCeEEeccccChhh--h-------hhcCC
Confidence            5999999999999999999999999999999876543321          157899999999887  2       23589


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCC-----------
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVT-----------  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-----------  163 (214)
                      |+|||+||....               ..+.|+    ..++.+++.+++.+.+++|++||.++..+.+.           
T Consensus        63 d~vi~~ag~~~~---------------~~~~~~----~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  123 (221)
T 3ew7_A           63 NVVVDAYGISPD---------------EAEKHV----TSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLR  123 (221)
T ss_dssp             SEEEECCCSSTT---------------TTTSHH----HHHHHHHHHHCSCCSSEEEEECCCC------------------
T ss_pred             CEEEECCcCCcc---------------ccchHH----HHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCC
Confidence            999999997421               123344    55667778888887889999999887654432           


Q ss_pred             -CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          164 -SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       164 -~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                       ...|+.+|.+.+.+ +.+..  ...|++++.+.||.+.++
T Consensus       124 ~~~~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          124 EAPYYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEP  161 (221)
T ss_dssp             -CCCSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCC
T ss_pred             CHHHHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecC
Confidence             35699999998876 32322  156899999999999886

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.85  E-value=1.5e-20  Score=153.21  Aligned_cols=163  Identities=17%  Similarity=0.134  Sum_probs=125.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~   91 (214)
                      +++|||||+|+||++++++|+++ |++|++++|+.+..+...    .    ..++.++.+|++|. +.+.++++      
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N----HPHFHFVEGDISIHSEWIEYHVK------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T----CTTEEEEECCTTTCSHHHHHHHH------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----c----CCCeEEEeccccCcHHHHHhhcc------
Confidence            46999999999999999999998 899999999876543321    1    12578899999984 55666665      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC---------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV---------  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  162 (214)
                       ++|+|||+||...+.      ...+++...+++|+.++..+++++.+    .+ +++|++||.+.+...+         
T Consensus        67 -~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~  134 (345)
T 2bll_A           67 -KCDVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHS  134 (345)
T ss_dssp             -HCSEEEECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             -CCCEEEEcccccCcc------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccc
Confidence             579999999975321      11345778999999999888877754    34 6899999966542211         


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 ---------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 ---------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                               ....|+.+|.+.+.+++.++.+.   |++++.+.|+.+.++..
T Consensus       135 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          135 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred             ccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCc
Confidence                     11279999999999999998764   89999999999987764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.85  E-value=1.9e-21  Score=159.54  Aligned_cols=168  Identities=14%  Similarity=0.198  Sum_probs=126.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.....  .+.+.       .+. +.+|++|.+.+.++++.  
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-------~~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-------DLN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT-------TSC-CSEEEEHHHHHHHHHTT--
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc-------Cce-EeeecCcHHHHHHHHhh--
Confidence            3677999999999999999999999999 89999998765321  11111       122 67899999888877753  


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV------  162 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  162 (214)
                      ..++++|+|||+||....        +.++++..+++|+.++..+++++.+.    +. ++|++||.+.+...+      
T Consensus       111 ~~~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E  177 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIES  177 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSS
T ss_pred             cccCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCC
Confidence            125679999999997532        22346889999999999999888762    34 799999986553322      


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 -----TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 -----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                           ....|+.+|++.+.+++.++.+   .|++++.+.|+.+.++..
T Consensus       178 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~  222 (357)
T 2x6t_A          178 REYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE  222 (357)
T ss_dssp             GGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCC
Confidence                 1568999999999999998876   489999999999987753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.85  E-value=1.2e-20  Score=155.52  Aligned_cols=166  Identities=17%  Similarity=0.210  Sum_probs=131.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC-CHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT-KEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~   88 (214)
                      +.+|++|||||+|+||++++++|+++ |++|++++|+.+..+...+.        .++.++.+|++ |.+++.++++   
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~--------~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKH--------ERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGS--------TTEEEEECCTTTCHHHHHHHHH---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccC--------CCeEEEeCccCCCHHHHHHHhc---
Confidence            66799999999999999999999998 99999999987655443221        25889999999 9999988887   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------  161 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  161 (214)
                          ++|+|||+|+...+.      ...++....+++|+.++..+++++...    + .++|++||.+.+...       
T Consensus        91 ----~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e  155 (372)
T 3slg_A           91 ----KCDVILPLVAIATPA------TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDP  155 (372)
T ss_dssp             ----HCSEEEECBCCCCHH------HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCT
T ss_pred             ----cCCEEEEcCccccHH------HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCc
Confidence                689999999976421      123456788999999998888777543    3 689999996443221       


Q ss_pred             -----------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 -----------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 -----------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                                 .....|+.+|.+.+.+++.++.+    |+++..+.|+.+..+...
T Consensus       156 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          156 DASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCC
T ss_pred             cccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcc
Confidence                       12237999999999999988865    899999999999887643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.85  E-value=2e-20  Score=166.22  Aligned_cols=179  Identities=14%  Similarity=0.181  Sum_probs=130.1

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.+.+++|++|||||+|+||++++++|+++|++|++++|+........+.+.....  .++.++.+|++|++++.+++++
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~v~~v~~Dl~d~~~l~~~~~~   82 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLCDRKGLEKVFKE   82 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--SCCCEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC--CceEEEEcCCCCHHHHHHHHHh
Confidence            44567899999999999999999999999999999999876543333233221111  2578899999999999888765


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC------
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG------  160 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  160 (214)
                      .     ++|+|||+||.....      ...+.....+++|+.++..+++++.    +.+.++||++||.+.+..      
T Consensus        83 ~-----~~D~Vih~A~~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~~iV~~SS~~vyg~~~~~~~  147 (699)
T 1z45_A           83 Y-----KIDSVIHFAGLKAVG------ESTQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSATVYGDATRFPN  147 (699)
T ss_dssp             S-----CCCEEEECCSCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCCGGGSTT
T ss_pred             C-----CCCEEEECCcccCcC------ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECcHHHhCCCccccc
Confidence            3     799999999975321      0123356789999999888776554    344578999999765321      


Q ss_pred             ---------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          161 ---------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       161 ---------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                               ......|+.+|++.+.+++.++.+. ..|+++..+.|+.+..+
T Consensus       148 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          148 MIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             CCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence                     1123689999999999999998775 35899999998777654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=1.8e-21  Score=148.67  Aligned_cols=150  Identities=15%  Similarity=0.113  Sum_probs=120.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|+++||||+|+||++++++|+++|+  +|++++|+++.         .    ..++.++.+|++|++++.+++      
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~----~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------E----HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------C----CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------c----CCCceEEeccccCHHHHHHhh------
Confidence            57899999999999999999999998  99999998754         0    124677889999887766554      


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                         +|+|||+||....        +.++++..+++|+.++..+++++.+    .+.+++|++||.....  +....|+.+
T Consensus        66 ---~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~--~~~~~y~~s  128 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRV  128 (215)
T ss_dssp             ---CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHH
T ss_pred             ---hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCC--CCccHHHHH
Confidence               8999999996431        2345788999999999888887654    3456899999987664  234689999


Q ss_pred             HHHHHHHHHHHHHHHccCCcE-EEEEeCCcccCccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIR-VNCVSPYAVSSPMA  205 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~-v~~v~Pg~v~t~~~  205 (214)
                      |++++.+++.       .|++ ++.+.||.+.++..
T Consensus       129 K~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~  157 (215)
T 2a35_A          129 KGELEQALQE-------QGWPQLTIARPSLLFGPRE  157 (215)
T ss_dssp             HHHHHHHHTT-------SCCSEEEEEECCSEESTTS
T ss_pred             HHHHHHHHHH-------cCCCeEEEEeCceeeCCCC
Confidence            9999988764       3898 99999999998754

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.84  E-value=9.2e-21  Score=152.85  Aligned_cols=154  Identities=14%  Similarity=0.149  Sum_probs=94.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||+|+||++++++|+++|++|++++|+.+.            .   +  ++.+|++|++++.++++..     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~---~--~~~~Dl~d~~~~~~~~~~~-----   59 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P---K--FEQVNLLDSNAVHHIIHDF-----   59 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHH-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C---C--eEEecCCCHHHHHHHHHhh-----
Confidence            5789999999999999999999999999999886532            0   1  5679999999998888754     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC----------CC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG----------GV  162 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------~~  162 (214)
                      ++|+|||+||....      +.+.+++...+++|+.++..+++++.+.    + +++|++||...+.+          ..
T Consensus        60 ~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~  128 (315)
T 2ydy_A           60 QPHVIVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPA  128 (315)
T ss_dssp             CCSEEEECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCC
T ss_pred             CCCEEEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCC
Confidence            79999999997532      2245678999999999999999988763    2 48999999876543          23


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      ....|+.+|++.+.+++.++.++  ..+|++.|. |+..+
T Consensus       129 ~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          129 PLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEK  165 (315)
T ss_dssp             CCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSS
T ss_pred             CcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCc
Confidence            45689999999999999875432  235555555 44443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.84  E-value=3e-20  Score=151.70  Aligned_cols=169  Identities=18%  Similarity=0.145  Sum_probs=123.1

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +.+.++++++|||||+|+||++++++|+++|++|++++|+........+.+..    ..++.++.+|+++..        
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~--------   88 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG----HENFELINHDVVEPL--------   88 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT----CTTEEEEECCTTSCC--------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhcc----CCceEEEeCccCChh--------
Confidence            33457889999999999999999999999999999999875433221122111    125788999998853        


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-------
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-------  159 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  159 (214)
                          +.++|+|||+||......      ..+++...+++|+.++..+++++.+.    + .++|++||.+.+.       
T Consensus        89 ----~~~~d~vih~A~~~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~  153 (343)
T 2b69_A           89 ----YIEVDQIYHLASPASPPN------YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQ  153 (343)
T ss_dssp             ----CCCCSEEEECCSCCSHHH------HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSB
T ss_pred             ----hcCCCEEEECccccCchh------hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCC
Confidence                457999999999753210      01245788999999999988887653    2 3799999975442       


Q ss_pred             ---------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          160 ---------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       160 ---------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                               +......|+.+|++.+.+++.++.+.   |++++.+.||.+.++..
T Consensus       154 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          154 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             cccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence                     12234579999999999999988764   89999999999988753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.84  E-value=4.7e-20  Score=148.76  Aligned_cols=155  Identities=19%  Similarity=0.273  Sum_probs=122.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++|||||+|+||++++++|+++  |++|++++|+....+              ++.++.+|++|++++.+++++.     
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------~~~~~~~D~~d~~~~~~~~~~~-----   61 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------------GIKFITLDVSNRDEIDRAVEKY-----   61 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------------TCCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------------CceEEEecCCCHHHHHHHHhhc-----
Confidence            3899999999999999999998  899999988754321              2467899999999998887642     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV----------  162 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  162 (214)
                      ++|+|||+|+....       ...+++...+++|+.++..+++++.+    .+.+++|++||.+.+.+..          
T Consensus        62 ~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~  130 (317)
T 3ajr_A           62 SIDAIFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITI  130 (317)
T ss_dssp             TCCEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSC
T ss_pred             CCcEEEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCcccccc
Confidence            79999999997531       12356788999999999998887754    3456899999977654321          


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          163 --TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       163 --~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                        ....|+.+|++.+.+++.++.++   |++++.+.|+.+..
T Consensus       131 ~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          131 TRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIIS  169 (317)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEec
Confidence              35689999999999999887653   79999997555443

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=6.7e-20  Score=148.08  Aligned_cols=154  Identities=15%  Similarity=0.202  Sum_probs=122.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++++|||||+|+||++++++|+++|++|+++.|+.                       .+|++|.+++.+++++.    
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhc----
Confidence            357899999999999999999999999998877652                       26999999998888754    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  160 (214)
                       ++|+|||+||.....     ....+++...+++|+.++..+++++.+    .+..++|++||...+..           
T Consensus        55 -~~d~vih~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~  124 (321)
T 1e6u_A           55 -RIDQVYLAAAKVGGI-----VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESEL  124 (321)
T ss_dssp             -CCSEEEECCCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGT
T ss_pred             -CCCEEEEcCeecCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCcccc
Confidence             799999999965311     112445788999999998888887755    34468999999765421           


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          161 -----GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       161 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                           .|....|+.+|.+.+.+++.++.++   |++++.+.|+.+..+..
T Consensus       125 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          125 LQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             TSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             ccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence                 1113489999999999999998764   89999999999988754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=6.3e-20  Score=156.38  Aligned_cols=171  Identities=12%  Similarity=0.127  Sum_probs=127.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHc---CCeEEEEecCCcchhhHHHHhhccCCC-------------CCCceEEEe
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKH---GAKVLIADIKDDLGESVCEDISSSSSS-------------ANGCSYVHC   72 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~---g~~vi~~~r~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~   72 (214)
                      ...++|+||||||+|+||++++++|+++   |++|+++.|+.+..+...+ +......             ..++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRR-LEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHH-HHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHH-HHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            4567899999999999999999999999   8999999998764432222 1111100             136889999


Q ss_pred             eCC------CHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCC
Q 044923           73 DVT------KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGR  146 (214)
Q Consensus        73 D~~------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  146 (214)
                      |++      |.+++.++++       ++|+|||+||....          +.+...+++|+.++..+++.+.    +.+.
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~----~~~~  206 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIAL----TTKL  206 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHT----SSSC
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHH----hCCC
Confidence            999      5556666665       68999999998642          2245678899988888777653    4445


Q ss_pred             CeEEEecCCCcccCCCC----------------------CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          147 GSIISTASVCGVIGGVT----------------------SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       147 g~iv~~sS~~~~~~~~~----------------------~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .++|++||.+.......                      ...|+.+|.+.+.+++.++.+.   |++++.+.||.|..+.
T Consensus       207 ~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          207 KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            68999999654322111                      1339999999999999998764   8999999999998653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.82  E-value=1.5e-19  Score=145.67  Aligned_cols=156  Identities=15%  Similarity=0.101  Sum_probs=122.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +++|||||+|+||++++++|+++|++|+++.|+....+     +.       ++.++.+|++ .+++.++++       +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~-------~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN-------DYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC-------ceEEEEcccc-HHHHHHhhc-------C
Confidence            68999999999999999999999999999999843322     11       4788999999 988887776       8


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------C
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------V  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~  162 (214)
                      +|+|||+|+.....          ++...+++|+.++..+++++..    .+..++|++||...+...           .
T Consensus        63 ~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~  128 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ----------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPL  128 (311)
T ss_dssp             CSEEEECCCCCCSS----------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCC
T ss_pred             CCEEEEccccCCCC----------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence            99999999976432          3466788999888877777644    445689999996544211           1


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ....|+.+|.+.+.+++.++.+   .|++++.+.|+.+..+...
T Consensus       129 p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          129 PDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC-
T ss_pred             CCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCC
Confidence            2468999999999999998875   5899999999999876543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.82  E-value=2.1e-19  Score=158.71  Aligned_cols=166  Identities=16%  Similarity=0.145  Sum_probs=128.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH-HHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD-IENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~   88 (214)
                      ++++++|||||+|+||++++++|+++ |++|++++|+.+..+...    .    ..++.++.+|++|.++ +.++++   
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----~----~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N----HPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----T----CTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----c----CCceEEEECCCCCcHHHHHHhhc---
Confidence            57899999999999999999999998 899999999876543221    1    1257889999999765 555554   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV------  162 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  162 (214)
                          ++|+|||+||...+.      ...+++...+++|+.++..+++++.+    .+ +++|++||.+.+...+      
T Consensus       382 ----~~D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E  446 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDE  446 (660)
T ss_dssp             ----HCSEEEECCCCCCTH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCT
T ss_pred             ----CCCEEEECceecCcc------ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCC
Confidence                689999999975321      12345788999999999888887755    33 6899999976542211      


Q ss_pred             ------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 ------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 ------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                  ....|+.+|.+.+.+++.++.++   |++++.+.||.+.++..
T Consensus       447 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          447 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTS
T ss_pred             CccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCc
Confidence                        12269999999999999998764   89999999999988764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.81  E-value=2.7e-19  Score=143.68  Aligned_cols=163  Identities=15%  Similarity=0.176  Sum_probs=123.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++|||||+|+||++++++|+++| ++|+++.|+.....  ...+.       .+. +.+|++|.+.+.++++...  +++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-------~~~-~~~d~~~~~~~~~~~~~~~--~~~   68 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-------DLN-IADYMDKEDFLIQIMAGEE--FGD   68 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-------TSC-CSEEEEHHHHHHHHHTTCC--CSS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC-------cce-eccccccHHHHHHHHhccc--cCC
Confidence            38999999999999999999999 89999988765421  11121       122 5689999888877765110  236


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  162 (214)
                      +|+|||+||....        ..+++...+++|+.++..+++++.+.    +. ++|++||.+.+...+           
T Consensus        69 ~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~  135 (310)
T 1eq2_A           69 VEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEK  135 (310)
T ss_dssp             CCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCC
T ss_pred             CcEEEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCC
Confidence            9999999997532        12346788999999999988887653    34 799999976543221           


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ....|+.+|.+.+.+++.++.+   .|++++.+.||.+.++..
T Consensus       136 p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~  175 (310)
T 1eq2_A          136 PLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE  175 (310)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred             CCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCC
Confidence            2457999999999999998865   489999999999988754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.81  E-value=1.6e-19  Score=144.03  Aligned_cols=147  Identities=18%  Similarity=0.225  Sum_probs=115.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .-..+++|||||+|+||++++++|+++|++|++++|+                        .+|++|++++.++++..  
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~--   62 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEK--   62 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHH--
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhc--
Confidence            3456899999999999999999999999999999885                        27999999998888765  


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-------  162 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------  162 (214)
                         ++|+|||+||....      +.+.+++...+++|+.++..+++++.+.    +. ++|++||.+.+.+.+       
T Consensus        63 ---~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~~-~iv~~SS~~v~~~~~~~~~~E~  128 (292)
T 1vl0_A           63 ---KPNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV----GA-EIVQISTDYVFDGEAKEPITEF  128 (292)
T ss_dssp             ---CCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----TC-EEEEEEEGGGSCSCCSSCBCTT
T ss_pred             ---CCCEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEechHHeECCCCCCCCCCC
Confidence               79999999996431      1234678899999999999999988763    33 899999976543322       


Q ss_pred             ----CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          163 ----TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       163 ----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                          ....|+.+|++.+.+++.++.       .+..+.|+.+..+
T Consensus       129 ~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          129 DEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD  166 (292)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred             CCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence                346899999999999988753       3566777777644

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.80  E-value=1.2e-19  Score=145.69  Aligned_cols=159  Identities=16%  Similarity=0.127  Sum_probs=119.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++++++|||||+|+||++++++|+++|+      +....              ...+..+.+|++|++++.++++..  
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------------~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------------WVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------------EEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------------ccccCceecccCCHHHHHHHHhhc--
Confidence            46779999999999999999999999998      11000              012344578999999999888753  


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC---------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG---------  160 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------  160 (214)
                         ++|+|||+|+.....     ..+.+++...+++|+.++..+++++..    .+..++|++||.+.+..         
T Consensus        61 ---~~d~Vih~A~~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~  128 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGGL-----FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDET  128 (319)
T ss_dssp             ---CCSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGG
T ss_pred             ---CCCEEEECceecccc-----cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCcccc
Confidence               699999999975311     112234677899999998888777644    34568999999765421         


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          161 -------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       161 -------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                             .|....|+.+|.+.+.+++.++.+.   |+++..+.|+.+..|..
T Consensus       129 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          129 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             GGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred             ccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence                   1222259999999999999998774   79999999999987754

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.80  E-value=3.5e-19  Score=140.59  Aligned_cols=144  Identities=20%  Similarity=0.202  Sum_probs=112.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++||||+|+||++++++|+ +|++|++++|+.+. +          .   +   +.+|++|++++.++++.+     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~---~---~~~Dl~~~~~~~~~~~~~-----~~   58 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------G---G---YKLDLTDFPRLEDFIIKK-----RP   58 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------T---C---EECCTTSHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------C---C---ceeccCCHHHHHHHHHhc-----CC
Confidence            59999999999999999999 48999999998642 0          0   1   789999999999988765     79


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV----------TS  164 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------~~  164 (214)
                      |+||||||....      +.+.++++..+++|+.++..+++++.+    .+ +++|++||...+.+.+          ..
T Consensus        59 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~  127 (273)
T 2ggs_A           59 DVIINAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPI  127 (273)
T ss_dssp             SEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCS
T ss_pred             CEEEECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCC
Confidence            999999997532      123467899999999999999998865    23 4899999987764432          25


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEe
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS  196 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~  196 (214)
                      ..|+.+|++++.+++.    +....+|++.|.
T Consensus       128 ~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~  155 (273)
T 2ggs_A          128 NYYGLSKLLGETFALQ----DDSLIIRTSGIF  155 (273)
T ss_dssp             SHHHHHHHHHHHHHCC----TTCEEEEECCCB
T ss_pred             CHHHHHHHHHHHHHhC----CCeEEEeccccc
Confidence            6899999999999887    223345555555

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.78  E-value=1.5e-18  Score=138.06  Aligned_cols=145  Identities=13%  Similarity=0.125  Sum_probs=113.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |+++||||||+||++++++|+++  |++|+++.|+.+..+.+..         .++.++.+|++|++++.++++      
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~d~~~l~~~~~------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---------QGVEVRHGDYNQPESLQKAFA------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---------TTCEEEECCTTCHHHHHHHTT------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---------cCCeEEEeccCCHHHHHHHHh------
Confidence            46999999999999999999999  9999999998765543321         146789999999998888776      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                       ++|++||+|+.. .        ..       ++|+.++..+++++.    +.+.+++|++||.+.. .  ....|+.+|
T Consensus        66 -~~d~vi~~a~~~-~--------~~-------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~-~--~~~~y~~~K  121 (287)
T 2jl1_A           66 -GVSKLLFISGPH-Y--------DN-------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAE-E--SIIPLAHVH  121 (287)
T ss_dssp             -TCSEEEECCCCC-S--------CH-------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGG-G--CCSTHHHHH
T ss_pred             -cCCEEEEcCCCC-c--------Cc-------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCC-C--CCCchHHHH
Confidence             689999999952 1        11       567777776666653    4455789999998764 2  234899999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .+.+.+.+.       .|++++.+.||.+.++.
T Consensus       122 ~~~E~~~~~-------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          122 LATEYAIRT-------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHHHHHH-------TTCCEEEEEECCBHHHH
T ss_pred             HHHHHHHHH-------cCCCeEEEECCEecccc
Confidence            999988752       58999999999987665

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.78  E-value=4.2e-18  Score=136.39  Aligned_cols=154  Identities=16%  Similarity=0.168  Sum_probs=113.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|+++||||||+||++++++|+++| ++|+++.|+.+....  +.+..     ..+.++.+|++|++++.++++      
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-----~~~~~~~~D~~d~~~l~~~~~------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-----QGAEVVQGDQDDQVIMELALN------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-----TTCEEEECCTTCHHHHHHHHT------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-----CCCEEEEecCCCHHHHHHHHh------
Confidence            4789999999999999999999999 999999998765421  22221     147889999999999988876      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---CCCccch
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---VTSHAYT  168 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~~~~~y~  168 (214)
                       ++|+|||++|.....       .       .+.|+    ..++.+++.+++.+.++||++|+.. ..+.   +....|+
T Consensus        72 -~~d~vi~~a~~~~~~-------~-------~~~~~----~~~~~~~~aa~~~gv~~iv~~S~~~-~~~~~~~~~~~~y~  131 (299)
T 2wm3_A           72 -GAYATFIVTNYWESC-------S-------QEQEV----KQGKLLADLARRLGLHYVVYSGLEN-IKKLTAGRLAAAHF  131 (299)
T ss_dssp             -TCSEEEECCCHHHHT-------C-------HHHHH----HHHHHHHHHHHHHTCSEEEECCCCC-HHHHTTTSCCCHHH
T ss_pred             -cCCEEEEeCCCCccc-------c-------chHHH----HHHHHHHHHHHHcCCCEEEEEcCcc-ccccCCCcccCchh
Confidence             689999999854210       0       12333    3445566666666677899966644 3222   2246799


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      .+|++++.+.+.       .|++++.+.||.+.++...
T Consensus       132 ~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          132 DGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             HHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred             hHHHHHHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence            999999988764       3899999999999887654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.77  E-value=2.9e-19  Score=144.04  Aligned_cols=165  Identities=18%  Similarity=0.099  Sum_probs=114.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++.++++|||||||+||++++++|+++|++|+++.|+..........+..... ..++.++.+|++             
T Consensus         3 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~-------------   68 (321)
T 3vps_A            3 RNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLE-KPVLELEERDLS-------------   68 (321)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEEC-SCGGGCCHHHHT-------------
T ss_pred             cccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhcc-CCCeeEEeCccc-------------
Confidence            345678999999999999999999999999999999976521111111111100 124566667776             


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-------  161 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  161 (214)
                          ++|+|||+|+......  ..    ++....++ |+.++..+++++...    +..++|++||...+...       
T Consensus        69 ----~~d~vi~~a~~~~~~~--~~----~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E  133 (321)
T 3vps_A           69 ----DVRLVYHLASHKSVPR--SF----KQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPE  133 (321)
T ss_dssp             ----TEEEEEECCCCCCHHH--HT----TSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----cCCEEEECCccCChHH--HH----hCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCC
Confidence                7899999999764210  01    11233455 888888877776543    34689999997654322       


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHccCCc-EEEEEeCCcccCccc
Q 044923          162 ----VTSHAYTSSKHGVVGLMKNTAVELGRFGI-RVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 ----~~~~~y~~sK~a~~~l~~~la~e~~~~gi-~v~~v~Pg~v~t~~~  205 (214)
                          .....|+.+|.+.+.+++.++.+   .|+ +++.+.|+.+..+..
T Consensus       134 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~  179 (321)
T 3vps_A          134 DSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGE  179 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCC
Confidence                12468999999999999999875   488 999999999987754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=1.2e-18  Score=139.29  Aligned_cols=147  Identities=15%  Similarity=0.130  Sum_probs=114.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|+||++++++|+ +|++|++++|+..                    .+.+|++|++++.++++..     ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------------~~~~D~~d~~~~~~~~~~~-----~~   55 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------------EFCGDFSNPKGVAETVRKL-----RP   55 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------------SSCCCTTCHHHHHHHHHHH-----CC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------------cccccCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999 8999999988751                    2468999999998888754     69


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------C
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------T  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~  163 (214)
                      |+|||+||.....      ...+++...+++|+.++..+++++.    +.+ .++|++||.+.+.+.+           .
T Consensus        56 d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p  124 (299)
T 1n2s_A           56 DVIVNAAAHTAVD------KAESEPELAQLLNATSVEAIAKAAN----ETG-AWVVHYSTDYVFPGTGDIPWQETDATSP  124 (299)
T ss_dssp             SEEEECCCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHT----TTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCC
T ss_pred             CEEEECcccCCHh------hhhcCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEecccEEeCCCCCCCCCCCCCCC
Confidence            9999999975321      1123467889999999888887763    333 3799999976543221           2


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ...|+.+|.+.+.+++.++.       +++.+.|+.+.++..
T Consensus       125 ~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~  159 (299)
T 1n2s_A          125 LNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKG  159 (299)
T ss_dssp             SSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSS
T ss_pred             ccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCc
Confidence            45899999999998887642       788999999987753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.77  E-value=9.7e-18  Score=137.61  Aligned_cols=151  Identities=15%  Similarity=0.112  Sum_probs=113.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEee-CCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD-VTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~~~~~~~~~~~~   90 (214)
                      ++|+++||||||+||++++++|+++|++|+++.|+.+...  .+.+...    ..+.++.+| ++|++++.++++     
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~----~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI----PNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS----TTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc----CCcEEEECCccCCHHHHHHHHh-----
Confidence            3578999999999999999999999999999999876542  1222221    147888999 999999988776     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCC-cccCCCCCccch
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVC-GVIGGVTSHAYT  168 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~-~~~~~~~~~~y~  168 (214)
                        .+|++|||++....                 +.|..     .+.+++.+++.+ .+++|++||.. ...+.+....|+
T Consensus        73 --~~d~Vi~~a~~~~~-----------------~~~~~-----~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~  128 (352)
T 1xgk_A           73 --GAHLAFINTTSQAG-----------------DEIAI-----GKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMW  128 (352)
T ss_dssp             --TCSEEEECCCSTTS-----------------CHHHH-----HHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             --cCCEEEEcCCCCCc-----------------HHHHH-----HHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHH
Confidence              68999999874310                 12332     245555555555 57999999986 344445557899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .+|++.+.+++.       .|++++.|.||++....
T Consensus       129 ~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          129 APKFTVENYVRQ-------LGLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             HHHHHHHHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEecceecCCc
Confidence            999999988865       28999999999876544

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.77  E-value=8.4e-19  Score=139.55  Aligned_cols=143  Identities=17%  Similarity=0.178  Sum_probs=114.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||+|+||++++++|+++|++|++++|.                        ++|++|.+++.+++++.     ++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~-----~~   57 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEI-----RP   57 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhc-----CC
Confidence            79999999999999999999999999999881                        27999999999888865     79


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  163 (214)
                      |+|||+||.....      ...+++...+++|+.++..+++++.+.    + .++|++||...+.+.           ..
T Consensus        58 d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p  126 (287)
T 3sc6_A           58 HIIIHCAAYTKVD------QAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAP  126 (287)
T ss_dssp             SEEEECCCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCC
T ss_pred             CEEEECCcccChH------HHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCC
Confidence            9999999976421      112457889999999999988887553    2 379999997654221           22


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ...|+.+|.+.+.+++.++.       ++..+.|+.+..+.
T Consensus       127 ~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          127 INIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKY  160 (287)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSS
T ss_pred             CCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCC
Confidence            46899999999999887654       35788899887764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.76  E-value=3.7e-18  Score=135.58  Aligned_cols=142  Identities=13%  Similarity=0.111  Sum_probs=106.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +++||||+|+||++++++|+++  |++|+++.|+.+..+.+..         .++.++.+|++|++++.++++       
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~-------   64 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---------QGITVRQADYGDEAALTSALQ-------   64 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---------TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---------CCCeEEEcCCCCHHHHHHHHh-------
Confidence            3899999999999999999998  9999999998765543321         146788999999998887765       


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|+|||+||...       +           .|+.++..    +++.+++.+.+++|++||.+..   +....|+.+|.
T Consensus        65 ~~d~vi~~a~~~~-------~-----------~~~~~~~~----l~~a~~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~  119 (286)
T 2zcu_A           65 GVEKLLLISSSEV-------G-----------QRAPQHRN----VINAAKAAGVKFIAYTSLLHAD---TSPLGLADEHI  119 (286)
T ss_dssp             TCSEEEECC--------------------------CHHHH----HHHHHHHHTCCEEEEEEETTTT---TCCSTTHHHHH
T ss_pred             CCCEEEEeCCCCc-------h-----------HHHHHHHH----HHHHHHHcCCCEEEEECCCCCC---CCcchhHHHHH
Confidence            6899999999520       0           24444444    4444455556789999998765   23358999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +.+.+.+.       .|++++.+.||++.++.
T Consensus       120 ~~e~~~~~-------~~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          120 ETEKMLAD-------SGIVYTLLRNGWYSENY  144 (286)
T ss_dssp             HHHHHHHH-------HCSEEEEEEECCBHHHH
T ss_pred             HHHHHHHH-------cCCCeEEEeChHHhhhh
Confidence            99988763       48999999999887654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.75  E-value=3.7e-18  Score=146.46  Aligned_cols=171  Identities=13%  Similarity=0.117  Sum_probs=125.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch---hhHHHHhhccC------CCCCCceEEEeeCCCHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG---ESVCEDISSSS------SSANGCSYVHCDVTKEKDIEN   82 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~---~~~~~~~~~~~------~~~~~v~~~~~D~~~~~~~~~   82 (214)
                      ..+++|||||||+||++++++|.++|++|+++.|+....   +.+.+.+....      ....++.++.+|++|++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            358999999999999999999999999999999987632   22222222110      01136899999999988776 


Q ss_pred             HHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc--ccC
Q 044923           83 AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG--VIG  160 (214)
Q Consensus        83 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~  160 (214)
                             ...++|+|||+|+...         ...++...+++|+.++..+++.+.+     +..++|++||.+.  ...
T Consensus       228 -------~~~~~D~Vih~Aa~~~---------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~  286 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD---------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFD  286 (508)
T ss_dssp             -------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEEC
T ss_pred             -------CccCCCEEEECCceec---------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCc
Confidence                   3458999999999753         1235677889999999988887755     3468999999776  100


Q ss_pred             ----------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          161 ----------------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       161 ----------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                                      ......|+.+|.+.+.+++.++.    .|++++.+.||.+..+....+
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~  346 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRW  346 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCC
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCc
Confidence                            11456899999999999888653    599999999999988765443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.74  E-value=1.9e-18  Score=137.62  Aligned_cols=151  Identities=14%  Similarity=0.042  Sum_probs=113.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++++|||| +|+||++++++|+++|++|+++.|+.+...             .++.++.+|++|++++.++++      
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP-------------AGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC-------------TTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cCCceEEccCCChHHHHHhhc------
Confidence            357899999 599999999999999999999999875421             257889999999998887765      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC----------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG----------  161 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  161 (214)
                      +++|+|||+||..           ..++...+++|+.++..+++++    ++.+.+++|++||.+.+...          
T Consensus        62 ~~~d~vih~a~~~-----------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~  126 (286)
T 3gpi_A           62 LRPEILVYCVAAS-----------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTP  126 (286)
T ss_dssp             GCCSEEEECHHHH-----------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSC
T ss_pred             CCCCEEEEeCCCC-----------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCC
Confidence            3699999999963           2345778899998777666654    45556789999997654221          


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          162 -VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       162 -~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                       .....|+.+|.+.+.+ +..        ++++.+.|+.+..+...
T Consensus       127 ~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          127 PIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             CCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBC
T ss_pred             CCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCch
Confidence             1246899999998877 432        78999999999876543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.73  E-value=4.1e-17  Score=130.87  Aligned_cols=147  Identities=16%  Similarity=0.200  Sum_probs=103.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-------cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-------DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-------~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      +++++||||||+||++++++|+++|++|+++.|+.       ++.+.+ +.+..     ..+.++.+|++|++++.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~-----~~v~~v~~D~~d~~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS-----LGVILLEGDINDHETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH-----TTCEEEECCTTCHHHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh-----CCCEEEEeCCCCHHHHHHHHh
Confidence            46799999999999999999999999999999986       222222 22221     147889999999999888876


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcc-----c
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGV-----I  159 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-----~  159 (214)
                             ++|+|||++|...                     +.+...    +++.+++.+ ..++|. |+.+..     .
T Consensus        76 -------~~d~vi~~a~~~~---------------------~~~~~~----l~~aa~~~g~v~~~v~-S~~g~~~~~~~~  122 (307)
T 2gas_A           76 -------QVDIVICAAGRLL---------------------IEDQVK----IIKAIKEAGNVKKFFP-SEFGLDVDRHDA  122 (307)
T ss_dssp             -------TCSEEEECSSSSC---------------------GGGHHH----HHHHHHHHCCCSEEEC-SCCSSCTTSCCC
T ss_pred             -------CCCEEEECCcccc---------------------cccHHH----HHHHHHhcCCceEEee-cccccCcccccC
Confidence                   6999999999631                     222233    334444444 567773 433211     1


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ..|....| .+|++++.+.+.       .|++++.+.||++.+++..
T Consensus       123 ~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~  161 (307)
T 2gas_A          123 VEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLR  161 (307)
T ss_dssp             CTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGG
T ss_pred             CCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccc
Confidence            12334578 999998877752       3799999999999886543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.72  E-value=1e-16  Score=127.63  Aligned_cols=146  Identities=14%  Similarity=0.083  Sum_probs=105.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++|||||||+||++++++|+++ |++|+++.|+.+..+.+.    .     .++.++.+|++|++++.++++       +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~----~-----~~v~~~~~D~~d~~~l~~~~~-------~   65 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW----R-----GKVSVRQLDYFNQESMVEAFK-------G   65 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG----B-----TTBEEEECCTTCHHHHHHHTT-------T
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh----h-----CCCEEEEcCCCCHHHHHHHHh-------C
Confidence            4999999999999999999998 999999999876554321    1     257899999999999888776       7


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHG  173 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  173 (214)
                      +|+|||+||...+         .       ..|+    ..++.+++.+++.+.++||++||.+....    ..|..++..
T Consensus        66 ~d~vi~~a~~~~~---------~-------~~~~----~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~  121 (289)
T 3e48_A           66 MDTVVFIPSIIHP---------S-------FKRI----PEVENLVYAAKQSGVAHIIFIGYYADQHN----NPFHMSPYF  121 (289)
T ss_dssp             CSEEEECCCCCCS---------H-------HHHH----HHHHHHHHHHHHTTCCEEEEEEESCCSTT----CCSTTHHHH
T ss_pred             CCEEEEeCCCCcc---------c-------hhhH----HHHHHHHHHHHHcCCCEEEEEcccCCCCC----CCCccchhH
Confidence            8999999996431         1       1133    33456666667677779999999654322    234444422


Q ss_pred             HHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          174 VVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       174 ~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      .     .....+...|++++.+.||.+.+++.
T Consensus       122 ~-----~~e~~~~~~g~~~~ilrp~~~~~~~~  148 (289)
T 3e48_A          122 G-----YASRLLSTSGIDYTYVRMAMYMDPLK  148 (289)
T ss_dssp             H-----HHHHHHHHHCCEEEEEEECEESTTHH
T ss_pred             H-----HHHHHHHHcCCCEEEEeccccccccH
Confidence            1     22233345689999999999988753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.69  E-value=1.4e-16  Score=128.65  Aligned_cols=144  Identities=15%  Similarity=0.178  Sum_probs=100.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+++||||||+||++++++|+++|++|+++.|+.+......+.+..     ..+.++.+|++|++++.++++       +
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-----~~v~~v~~Dl~d~~~l~~a~~-------~   79 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-----LGAIIVKGELDEHEKLVELMK-------K   79 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-----CCCEEEEecCCCHHHHHHHHc-------C
Confidence            5799999999999999999999999999999987522222222222     147889999999999988876       6


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccC-----CCCCccc
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIG-----GVTSHAY  167 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~-----~~~~~~y  167 (214)
                      +|+|||+++...                     +.+    .+.+++.+++.+ .+++|+ |+.+....     .|....|
T Consensus        80 ~d~vi~~a~~~~---------------------~~~----~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y  133 (318)
T 2r6j_A           80 VDVVISALAFPQ---------------------ILD----QFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI  133 (318)
T ss_dssp             CSEEEECCCGGG---------------------STT----HHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH
T ss_pred             CCEEEECCchhh---------------------hHH----HHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH
Confidence            899999999631                     112    233444444444 567774 44332111     1223468


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                       .+|++++.+.+.       .|+++..+.||.+...
T Consensus       134 -~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          134 -ERKRMIRRAIEE-------ANIPYTYVSANCFASY  161 (318)
T ss_dssp             -HHHHHHHHHHHH-------TTCCBEEEECCEEHHH
T ss_pred             -HHHHHHHHHHHh-------cCCCeEEEEcceehhh
Confidence             999988877653       4788899999987654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.68  E-value=5.3e-16  Score=126.68  Aligned_cols=154  Identities=15%  Similarity=0.130  Sum_probs=108.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +..++++||||||+||++++++|+++|++|+++.|+.....+..+.+.....  .++.++.+|++|.+++.+++++.   
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED--KGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh--CCcEEEEeecCCHHHHHHHHhhC---
Confidence            4567899999999999999999999999999999987322222221111111  25789999999999999888753   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCccc----CCCCCc
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVI----GGVTSH  165 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~----~~~~~~  165 (214)
                        ++|+|||++|..                     |+.+...+++++..    .+ ..++|+ |+.+...    +.+...
T Consensus        83 --~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~~  134 (346)
T 3i6i_A           83 --EIDIVVSTVGGE---------------------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPGL  134 (346)
T ss_dssp             --TCCEEEECCCGG---------------------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred             --CCCEEEECCchh---------------------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCcc
Confidence              799999999962                     66666666665543    33 445665 4433221    123446


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .|+.+|.+.+.+.+.       .|+++..+.||.+....
T Consensus       135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A          135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWP  166 (346)
T ss_dssp             HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCC
T ss_pred             hHHHHHHHHHHHHHH-------cCCCEEEEEeccccccc
Confidence            899999998877664       48999999999887754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.67  E-value=4.4e-16  Score=125.20  Aligned_cols=154  Identities=14%  Similarity=0.123  Sum_probs=105.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++++||||||+||++++++|+++|++|+++.|+.... .+..+.+.....  .++.++.+|++|++++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~l~~~~~------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--LGAKLIEASLDDHQRLVDALK------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT--TTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh--CCeEEEeCCCCCHHHHHHHHh------
Confidence            36799999999999999999999999999999985431 111111111101  247889999999999888876      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccC------CCCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIG------GVTS  164 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~------~~~~  164 (214)
                       ++|+|||+++.....                 .|+.+...++    +.+++.+ .+++|+ |+.+....      .|..
T Consensus        76 -~~d~vi~~a~~~~~~-----------------~~~~~~~~l~----~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~  132 (313)
T 1qyd_A           76 -QVDVVISALAGGVLS-----------------HHILEQLKLV----EAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGS  132 (313)
T ss_dssp             -TCSEEEECCCCSSSS-----------------TTTTTHHHHH----HHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTT
T ss_pred             -CCCEEEECCccccch-----------------hhHHHHHHHH----HHHHhcCCCceEEe-cCCcCCccccccCCCCCc
Confidence             699999999975321                 1454444444    4444555 567874 44332111      2334


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ..| .+|.+++.+.+       ..|++++.+.||++..+..
T Consensus       133 ~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~  165 (313)
T 1qyd_A          133 ITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFA  165 (313)
T ss_dssp             HHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHT
T ss_pred             chH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccc
Confidence            578 99999887765       2478999999998876543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.66  E-value=2.2e-16  Score=127.54  Aligned_cols=145  Identities=15%  Similarity=0.167  Sum_probs=100.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cc----hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DL----GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++||||||+||++++++|+++|++|+++.|+. ..    .....+.+..     ..+.++.+|++|++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~-----~~v~~v~~D~~d~~~l~~a~~--   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS-----MGVTIIEGEMEEHEKMVSVLK--   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHT--
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc-----CCcEEEEecCCCHHHHHHHHc--
Confidence            36799999999999999999999999999999986 21    1111111211     147889999999999988876  


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCccc------C
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVI------G  160 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~------~  160 (214)
                           ++|+|||+++...                     +.+    .+.+++.+++.+ .+++| . |..+..      .
T Consensus        77 -----~~d~vi~~a~~~~---------------------~~~----~~~l~~aa~~~g~v~~~v-~-S~~g~~~~~~~~~  124 (321)
T 3c1o_A           77 -----QVDIVISALPFPM---------------------ISS----QIHIINAIKAAGNIKRFL-P-SDFGCEEDRIKPL  124 (321)
T ss_dssp             -----TCSEEEECCCGGG---------------------SGG----GHHHHHHHHHHCCCCEEE-C-SCCSSCGGGCCCC
T ss_pred             -----CCCEEEECCCccc---------------------hhh----HHHHHHHHHHhCCccEEe-c-cccccCccccccC
Confidence                 6899999999631                     222    234444445554 56777 3 333321      1


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .|....| .+|++++.+.+.       .|++++.+.||.+..+.
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~  160 (321)
T 3c1o_A          125 PPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYF  160 (321)
T ss_dssp             HHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHH
T ss_pred             CCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceecccc
Confidence            1224578 999999887762       36888889999886543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=7.1e-16  Score=122.50  Aligned_cols=141  Identities=9%  Similarity=-0.004  Sum_probs=104.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++++|||| |+||++++++|+++|++|+++.|+.+..+.+..         .++.++.+|++|.+            +.+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~------------~~~   63 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---------SGAEPLLWPGEEPS------------LDG   63 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---------TTEEEEESSSSCCC------------CTT
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---------CCCeEEEecccccc------------cCC
Confidence            67999998 999999999999999999999998766544332         15788999999943            458


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCCeEEEecCCCcccCC----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP--AGRGSIISTASVCGVIGG----------  161 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~----------  161 (214)
                      +|+|||+|+.....       ..                .++.++..+++  .+..++|++||.+.+...          
T Consensus        64 ~d~vi~~a~~~~~~-------~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~  120 (286)
T 3ius_A           64 VTHLLISTAPDSGG-------DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTP  120 (286)
T ss_dssp             CCEEEECCCCBTTB-------CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSC
T ss_pred             CCEEEECCCccccc-------cH----------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCC
Confidence            99999999975321       11                01233444444  345689999997544221          


Q ss_pred             -CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 -VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 -~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                       .....|+.+|.+.+.+.+.+      .|++++.+.|+.+..+..
T Consensus       121 ~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~  159 (286)
T 3ius_A          121 LTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGR  159 (286)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTB
T ss_pred             CCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCc
Confidence             12347999999999888776      589999999999987753

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.65  E-value=5.9e-16  Score=124.15  Aligned_cols=150  Identities=15%  Similarity=0.236  Sum_probs=101.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch--hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG--ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .++++||||||+||++++++|+++|++|+++.|+....  .+..+.+.....  ..+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence            36799999999999999999999999999999975432  111111111111  247889999999999988877     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccC-----CCCC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIG-----GVTS  164 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~-----~~~~  164 (214)
                        ++|+|||+++...                     +.+.    +.+++.+++.+ ..++|+ |+.+....     .|..
T Consensus        77 --~~d~vi~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ---------------------IESQ----VNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAK  128 (308)
T ss_dssp             --TCSEEEECCCGGG---------------------SGGG----HHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHH
T ss_pred             --CCCEEEECCcchh---------------------hhhH----HHHHHHHHhcCCCceEee-cccccCccccccCCcch
Confidence              6899999999631                     1122    23344444444 567773 44332211     1223


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ..| .+|++++.+.+.       .|++++.+.||++.+...
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~  161 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFL  161 (308)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHT
T ss_pred             hHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccc
Confidence            568 999998877753       378889999998876543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.65  E-value=5.8e-15  Score=120.93  Aligned_cols=159  Identities=14%  Similarity=0.052  Sum_probs=112.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcC-----CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHG-----AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g-----~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +|++|||||+|+||++++++|+++|     ++|+++.|+.....     .     ...++.++.+|++|++++.++++..
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-----~~~~~~~~~~Dl~d~~~~~~~~~~~   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-----EDNPINYVQCDISDPDDSQAKLSPL   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-----CSSCCEEEECCTTSHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-----ccCceEEEEeecCCHHHHHHHHhcC
Confidence            5789999999999999999999999     99999999875432     1     1125788999999999888776522


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEE-------EecCCCcccC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSII-------STASVCGVIG  160 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv-------~~sS~~~~~~  160 (214)
                          +++|+|||+||...           +++...+++|+.++..+++++.+...  +..++|       ++||.+.+-.
T Consensus        71 ----~~~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~  133 (364)
T 2v6g_A           71 ----TDVTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGK  133 (364)
T ss_dssp             ----TTCCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTT
T ss_pred             ----CCCCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccc
Confidence                24999999999642           13577889999999988887765421  234565       6777643211


Q ss_pred             C--------------CCCccchhhHHHHHHHHHHHHHHHccCC-cEEEEEeCCcccCccc
Q 044923          161 G--------------VTSHAYTSSKHGVVGLMKNTAVELGRFG-IRVNCVSPYAVSSPMA  205 (214)
Q Consensus       161 ~--------------~~~~~y~~sK~a~~~l~~~la~e~~~~g-i~v~~v~Pg~v~t~~~  205 (214)
                      .              +....|    .+.+.+++.++.   ..| +++..+.|+.+..+..
T Consensus       134 ~~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          134 IESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             SCCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCT
T ss_pred             cccCCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCC
Confidence            0              112234    233444444432   245 9999999999987654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.65  E-value=1.4e-15  Score=125.28  Aligned_cols=135  Identities=19%  Similarity=0.148  Sum_probs=108.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++|||||||+||++++++|+++|+ +|+..+|+                            +|++++.++++       +
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~-------~   46 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALL-------K   46 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHH-------H
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhc-------c
Confidence            699999999999999999999998 66655443                            67888888877       5


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCC-eEEEecCCCcccCCCCCccchhhHH
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      +|+|||+||...+.          ++...+++|+.++..+++++    ++.+.. ++|++||.....    ...|+.+|.
T Consensus        47 ~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~  108 (369)
T 3st7_A           47 ADFIVHLAGVNRPE----------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKL  108 (369)
T ss_dssp             CSEEEECCCSBCTT----------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHH
T ss_pred             CCEEEECCcCCCCC----------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHH
Confidence            89999999976431          23556888998887776665    444444 899999977653    678999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +.+.+.+.++.+.   |+++..+.|+.+..+..
T Consensus       109 ~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A          109 QGEQLLREYAEEY---GNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHh---CCCEEEEECCceeCCCC
Confidence            9999999998874   78999999999987654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.62  E-value=5e-15  Score=127.24  Aligned_cols=154  Identities=14%  Similarity=0.038  Sum_probs=110.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++++|||||+|+||+++++.|+++|++|+++.|+....                 ..+.+|+.+..         .+.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~~---------~~~l~  200 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNPA---------SDLLD  200 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSCC---------TTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccchh---------HHhcC
Confidence            67999999999999999999999999999999987542                 11456765421         12234


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------C
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------G  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~  161 (214)
                      ++|+|||+||.....     ..+.+.+...+++|+.++..+++++.   ++.+..++|++||.+.+.+           .
T Consensus       201 ~~D~Vih~A~~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~  272 (516)
T 3oh8_A          201 GADVLVHLAGEPIFG-----RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESE  272 (516)
T ss_dssp             TCSEEEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSC
T ss_pred             CCCEEEECCCCcccc-----ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCC
Confidence            899999999975321     23455678899999999998888643   2344568999999664420           1


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +....|+.+|...+.+.+.    ....|++++.+.||.+.++.
T Consensus       273 ~~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          273 SGDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             CCSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTT
T ss_pred             CCcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCC
Confidence            1234577777766655432    33569999999999998864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.50  E-value=3.8e-15  Score=118.85  Aligned_cols=110  Identities=18%  Similarity=0.272  Sum_probs=83.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+++||||+||||+++++.|+++|++|++++|+.++.+++.+++....    .+.++.+|++|++++.++++    
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECCSHHHHHHHTT----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEecCCCHHHHHHHHH----
Confidence            4789999999999999999999999999999999999888777777665421    35678899999998877765    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCH-HHHHHHHhhhhhHHH
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQ-AEFERILSVNLVGAF  131 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  131 (214)
                         .+|+||||+|..... .+..+.+. ++|...+++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence               589999999864211 11111222 345557888887665

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.37  E-value=1.5e-12  Score=105.71  Aligned_cols=164  Identities=14%  Similarity=0.074  Sum_probs=108.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-------KVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .+++||||+|+||.+++..|+++|.       .|+++++.+  +..+....++...     ...+. .|+++.+++.+.+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-----~~~~~-~di~~~~~~~~a~   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-----AFPLL-AGLEATDDPKVAF   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-----TCTTE-EEEEEESCHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-----ccccc-CCeEeccChHHHh
Confidence            4699999999999999999999986       788888764  2222222233221     11223 5776655555444


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc------
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV------  158 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------  158 (214)
                      +       +.|++||.||.....     ..+   ....+++|+.++..+.+++..+-  ....+++++|+....      
T Consensus        79 ~-------~~D~Vih~Ag~~~~~-----~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~  141 (327)
T 1y7t_A           79 K-------DADYALLVGAAPRKA-----GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAY  141 (327)
T ss_dssp             T-------TCSEEEECCCCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHH
T ss_pred             C-------CCCEEEECCCcCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHH
Confidence            3       789999999975321     122   35678999988888887776642  123578888875411      


Q ss_pred             -c--CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          159 -I--GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       159 -~--~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                       .  +.+....|+.+|...+.+.+.++..+   |+++..+.|..+..+
T Consensus       142 ~~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          142 KNAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN  186 (327)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred             HHcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence             1  23445679999999999998888765   455555555554444

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.35  E-value=6.2e-11  Score=94.54  Aligned_cols=152  Identities=19%  Similarity=0.155  Sum_probs=96.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||||.||++++++|.++|++|+++.|++...               .   +..|     .+      ..+...++
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~---~~~~-----~~------~~~~l~~~   52 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------R---ITWD-----EL------AASGLPSC   52 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------E---EEHH-----HH------HHHCCCSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------e---eecc-----hh------hHhhccCC
Confidence            489999999999999999999999999999875321               0   1111     11      11234589


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------C
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------T  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~  163 (214)
                      |.+||.||....  ......+.+.....++.|+.++-.+.+.+..  .+.+...+|+.||.+.+....           .
T Consensus        53 d~vihla~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~  128 (298)
T 4b4o_A           53 DAAVNLAGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD  128 (298)
T ss_dssp             SEEEECCCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC
T ss_pred             CEEEEeccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeeeecCCCCCcccccCCccc
Confidence            999999985321  1223446777788899998777766655443  222344577777765443211           1


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ...|+..|...+.     .......++++..+.|+.+..+.
T Consensus       129 ~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          129 FDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRG  164 (298)
T ss_dssp             SSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTT
T ss_pred             cchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCC
Confidence            1223333333221     12335678999999999987763

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.30  E-value=1.9e-11  Score=93.39  Aligned_cols=153  Identities=13%  Similarity=0.112  Sum_probs=91.6

Q ss_pred             ccCCcEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEee
Q 044923           10 RLQGKVALITGG----------------AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD   73 (214)
Q Consensus        10 ~~~~k~~lItGa----------------s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D   73 (214)
                      +++||++|||||                |||||+++|++|+++|++|++++++.. ++       .  .  ..+  -.+|
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-------~--~--~g~--~~~d   70 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-------T--P--PFV--KRVD   70 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-------C--C--TTE--EEEE
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-------c--C--CCC--eEEc
Confidence            588999999999                689999999999999999999887652 11       0  1  012  3567


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHH--HhhhhhHHHHHHHHHHHhhccC-CCCeEE
Q 044923           74 VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI--LSVNLVGAFLGTKHAARVMKPA-GRGSII  150 (214)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~~~~~~-~~g~iv  150 (214)
                      +++.   +++++++.+.++++|++|||||+....  ++ ....+.+++.  -+.++.-.+....-+++.+.+. ..+.++
T Consensus        71 v~~~---~~~~~~v~~~~~~~Dili~~Aav~d~~--p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~  144 (226)
T 1u7z_A           71 VMTA---LEMEAAVNASVQQQNIFIGCAAVADYR--AA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV  144 (226)
T ss_dssp             CCSH---HHHHHHHHHHGGGCSEEEECCBCCSEE--ES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE
T ss_pred             cCcH---HHHHHHHHHhcCCCCEEEECCcccCCC--Cc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE
Confidence            7774   446677788899999999999986422  11 1222223330  0222222223333345555432 222221


Q ss_pred             EecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCc
Q 044923          151 STASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYA  199 (214)
Q Consensus       151 ~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~  199 (214)
                      .        +++..   .      +.+.+....++.++|+.+...+|..
T Consensus       145 V--------GFaaE---t------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          145 V--------GFAAE---T------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             E--------EEEEE---S------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             E--------Ecchh---h------chHHHHHHHHHHhcCCCEEEEeecc
Confidence            1        11110   0      2366777777778888887777654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.14  E-value=6.6e-11  Score=90.63  Aligned_cols=79  Identities=13%  Similarity=0.254  Sum_probs=60.2

Q ss_pred             CCcEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC
Q 044923           12 QGKVALITGG----------------AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT   75 (214)
Q Consensus        12 ~~k~~lItGa----------------s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~   75 (214)
                      +||++|||||                ||++|.++|++|+++|++|++++|+.....        ..+  ..     +|+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~--~~-----~~~~   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPH--PN-----LSIR   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCC--TT-----EEEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCC--CC-----eEEE
Confidence            5899999999                788999999999999999999998753211        000  11     2333


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEeCCcccC
Q 044923           76 KEKDIENAVNTAVSQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        76 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~  105 (214)
                      +.++++++++.+.+.++++|++|+||++..
T Consensus        67 ~v~s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           67 EITNTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             ECCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             EHhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence            344677778888888999999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.06  E-value=8.1e-10  Score=75.63  Aligned_cols=75  Identities=20%  Similarity=0.237  Sum_probs=61.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+++++|+|+ |++|.++++.|.+.| ++|++++|++++.+...    .     ..+..+.+|+++.+++.++++     
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~-----~~~~~~~~d~~~~~~~~~~~~-----   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R-----MGVATKQVDAKDEAGLAKALG-----   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T-----TTCEEEECCTTCHHHHHHHTT-----
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h-----CCCcEEEecCCCHHHHHHHHc-----
Confidence            3578999999 999999999999999 88999999876655443    1     146778899999988777664     


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                        ++|++|++++.
T Consensus        69 --~~d~vi~~~~~   79 (118)
T 3ic5_A           69 --GFDAVISAAPF   79 (118)
T ss_dssp             --TCSEEEECSCG
T ss_pred             --CCCEEEECCCc
Confidence              78999999963

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.99  E-value=6.7e-10  Score=80.60  Aligned_cols=78  Identities=18%  Similarity=0.245  Sum_probs=61.9

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCCcchhh---HHHHhhccCCCCCCceEEEeeCCCH--HHHHHHHHHHHHHcCCccEE
Q 044923           23 GSIGECAARLFSKHGAKVLIADIKDDLGES---VCEDISSSSSSANGCSYVHCDVTKE--KDIENAVNTAVSQYGKLDIM   97 (214)
Q Consensus        23 ~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~~~~~~~~~~~g~id~l   97 (214)
                      +-++.++++.|+++|++|++..|+++..+.   ..+.+...+   .++..+++|++++  ++++++++.+.+.+|+ |+|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G---~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVL  101 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG---MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVL  101 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT---CEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC---CeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEE
Confidence            357899999999999999999887654322   234443332   2567788999999  9999999999999999 999


Q ss_pred             EeCCccc
Q 044923           98 FNNAGIV  104 (214)
Q Consensus        98 i~~ag~~  104 (214)
                      |||||..
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.95  E-value=4.3e-09  Score=87.68  Aligned_cols=83  Identities=16%  Similarity=0.206  Sum_probs=70.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC---CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHG---AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g---~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++++|+|| ||||+++++.|++.|   ..|++.+|+.++++++.+.+....+  .++..+.+|++|.+++++++++.   
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~--~~~~~~~~D~~d~~~l~~~l~~~---   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY--GEIDITTVDADSIEELVALINEV---   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC--CCCEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC--CceEEEEecCCCHHHHHHHHHhh---
Confidence            57899999 899999999999998   3899999999888888877764322  24788899999999999998865   


Q ss_pred             cCCccEEEeCCccc
Q 044923           91 YGKLDIMFNNAGIV  104 (214)
Q Consensus        91 ~g~id~li~~ag~~  104 (214)
                        ++|+||||+|..
T Consensus        76 --~~DvVin~ag~~   87 (405)
T 4ina_A           76 --KPQIVLNIALPY   87 (405)
T ss_dssp             --CCSEEEECSCGG
T ss_pred             --CCCEEEECCCcc
Confidence              689999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.92  E-value=4e-09  Score=79.07  Aligned_cols=104  Identities=15%  Similarity=0.192  Sum_probs=71.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|++++|+||+||||.++++.+...|++|+++++++++.+...+    . +    .. ..+|.++.+..+.+.+...  
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~-g----~~-~~~d~~~~~~~~~~~~~~~--  104 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----L-G----VE-YVGDSRSVDFADEILELTD--  104 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----T-C----CS-EEEETTCSTHHHHHHHHTT--
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c-C----CC-EEeeCCcHHHHHHHHHHhC--
Confidence            368999999999999999999999999999999988765443321    1 1    11 2358877654444333221  


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      .+++|++|+|+|..                            ..+..++.+++  .|++|.+++..
T Consensus       105 ~~~~D~vi~~~g~~----------------------------~~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          105 GYGVDVVLNSLAGE----------------------------AIQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             TCCEEEEEECCCTH----------------------------HHHHHHHTEEE--EEEEEECSCGG
T ss_pred             CCCCeEEEECCchH----------------------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence            13699999999720                            12445666665  47899988754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.88  E-value=1.4e-12  Score=109.82  Aligned_cols=43  Identities=26%  Similarity=0.460  Sum_probs=37.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      .+.||+++|||++ +||+++|+.|+..|++|+++++++...+..
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            5789999999998 999999999999999999999887655443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.86  E-value=4.8e-09  Score=88.47  Aligned_cols=78  Identities=17%  Similarity=0.261  Sum_probs=61.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++|+++|+| +||+|+++++.|++.|++|++++|+.++.+.+.+.+    .   .+..+.+|++|.+++.++++      
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~---~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q---HSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----T---TEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----C---CceEEEeecCCHHHHHHHHc------
Confidence            468899997 799999999999999999999999876554433222    1   35678899999988877764      


Q ss_pred             CCccEEEeCCccc
Q 044923           92 GKLDIMFNNAGIV  104 (214)
Q Consensus        92 g~id~li~~ag~~  104 (214)
                       ++|+|||+++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             799999999863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.81  E-value=8.1e-09  Score=83.64  Aligned_cols=80  Identities=23%  Similarity=0.349  Sum_probs=60.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++||||+||||.++++.+...|++|+++++++++.+.. +++.        . ...+|.++.+++.+.+.++.. 
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g--------~-~~~~d~~~~~~~~~~~~~~~~-  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG--------F-DAAFNYKTVNSLEEALKKASP-  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--------C-SEEEETTSCSCHHHHHHHHCT-
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC--------C-cEEEecCCHHHHHHHHHHHhC-
Confidence            3689999999999999999999999999999999987665544 3321        1 133588874555555544432 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                       +++|++|+|+|
T Consensus       213 -~~~d~vi~~~g  223 (333)
T 1v3u_A          213 -DGYDCYFDNVG  223 (333)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -CCCeEEEECCC
Confidence             58999999999

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.75  E-value=2.7e-09  Score=84.87  Aligned_cols=81  Identities=17%  Similarity=0.207  Sum_probs=60.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++......  . ..+.+|+++.          .+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~--~-~~~~~d~~~~----------~~  189 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNK--K-FGEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTC--C-HHHHEEEECT----------TC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccc--c-cceeEEEeeH----------HH
Confidence            4789999999997 99999999999999 9999999988877777666432110  0 0123455542          33


Q ss_pred             HcCCccEEEeCCcccC
Q 044923           90 QYGKLDIMFNNAGIVD  105 (214)
Q Consensus        90 ~~g~id~li~~ag~~~  105 (214)
                      .++++|++|||+|...
T Consensus       190 ~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          190 DLDGVDIIINATPIGM  205 (287)
T ss_dssp             CCTTCCEEEECSCTTC
T ss_pred             hhCCCCEEEECCCCCC
Confidence            4578999999999754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.75  E-value=7.2e-08  Score=77.41  Aligned_cols=84  Identities=20%  Similarity=0.295  Sum_probs=65.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC---CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK---DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|.++.|+   .++++++.+++....+    +.+...++.+.+++.+.+
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~----~~~~~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD----CKAQLFDIEDHEQLRKEI  224 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS----CEEEEEETTCHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC----CceEEeccchHHHHHhhh
Confidence            3578999999998 7999999999999999 79999999   6777777776654322    344556777766665554


Q ss_pred             HHHHHHcCCccEEEeCCccc
Q 044923           85 NTAVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~  104 (214)
                      .       ..|++||+.+..
T Consensus       225 ~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          225 A-------ESVIFTNATGVG  237 (315)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------CCCEEEECccCC
Confidence            4       689999997754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.73  E-value=4.4e-08  Score=80.57  Aligned_cols=108  Identities=22%  Similarity=0.283  Sum_probs=74.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++++++|+|+ |+||+++++.+...|++|++.+|++++++...+...        .. +.+|.++.+++.+++.    
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g--------~~-~~~~~~~~~~l~~~~~----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG--------GR-VITLTATEANIKKSVQ----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--------TS-EEEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC--------ce-EEEecCCHHHHHHHHh----
Confidence            578999999999 999999999999999999999998876655433221        11 4578888887776654    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                         +.|++|++++..... .                    +..+.+..++.|++  .+.||++++..+
T Consensus       229 ---~~DvVi~~~g~~~~~-~--------------------~~li~~~~l~~mk~--gg~iV~v~~~~g  270 (369)
T 2eez_A          229 ---HADLLIGAVLVPGAK-A--------------------PKLVTRDMLSLMKE--GAVIVDVAVDQG  270 (369)
T ss_dssp             ---HCSEEEECCC----------------------------CCSCHHHHTTSCT--TCEEEECC----
T ss_pred             ---CCCEEEECCCCCccc-c--------------------chhHHHHHHHhhcC--CCEEEEEecCCC
Confidence               689999999964210 0                    01234556677753  578999988653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.71  E-value=4.6e-08  Score=82.73  Aligned_cols=80  Identities=18%  Similarity=0.257  Sum_probs=62.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++|+++|+|+ ||+|+++++.|++. |++|.+++|+.++++++.+. .       .+..+.+|++|.+++.++++  
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~-------~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-S-------GSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-G-------TCEEEECCTTCHHHHHHHHH--
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-c-------CCcEEEEecCCHHHHHHHHc--
Confidence            4577899999998 99999999999998 78899999987766555433 1       24567899999988877765  


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                           ++|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 789999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.68  E-value=2.6e-09  Score=91.79  Aligned_cols=102  Identities=18%  Similarity=0.222  Sum_probs=67.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++|||| ||+|++++..|++.|++|+++.|+.++++++.+.+..      .+    .++.|.   .++      
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~------~~----~~~~dl---~~~------  420 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG------KA----LSLTDL---DNY------  420 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-------C----EETTTT---TTC------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC------ce----eeHHHh---hhc------
Confidence            468899999999 5999999999999999999999998877777665521      11    122221   000      


Q ss_pred             HcCCccEEEeCCcccCCC---CCCCCCCCHHHHHHHHhhhhhHHH
Q 044923           90 QYGKLDIMFNNAGIVDEA---KPNILDNDQAEFERILSVNLVGAF  131 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~  131 (214)
                      ..+.+|++|||+|.....   ..++.+.+.++|..++++|+.+..
T Consensus       421 ~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          421 HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             --CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            113589999999975321   123455566778889999997654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.62  E-value=6.4e-08  Score=76.29  Aligned_cols=77  Identities=12%  Similarity=0.121  Sum_probs=57.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++|+|+ ||+|+++++.|++.|++|+++.|+.++++++.+.+....    .     +|+.+.+++       .+
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~----~-----~~~~~~~~~-------~~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG----S-----IQALSMDEL-------EG  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS----S-----EEECCSGGG-------TT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC----C-----eeEecHHHh-------cc
Confidence            568999999998 799999999999999999999999888777776654311    1     122232221       11


Q ss_pred             HcCCccEEEeCCcccC
Q 044923           90 QYGKLDIMFNNAGIVD  105 (214)
Q Consensus        90 ~~g~id~li~~ag~~~  105 (214)
                        +++|++|+++|...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              58999999999754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.62  E-value=9.6e-08  Score=77.79  Aligned_cols=105  Identities=26%  Similarity=0.275  Sum_probs=74.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+|++||||..+++.+...|++|+++++++++.+... ++    +    .. ...|.++.+++.+.+.++.+.
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~----g----~~-~~~d~~~~~~~~~~~~~~~~~  237 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI----G----GE-VFIDFTKEKDIVGAVLKATDG  237 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT----T----CC-EEEETTTCSCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc----C----Cc-eEEecCccHhHHHHHHHHhCC
Confidence            36899999999999999999999999999999999877654332 22    1    11 235888666666666555433


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                        ++|++|+++|..                           ...+.+++.+++  .|++|.+++..
T Consensus       238 --~~D~vi~~~g~~---------------------------~~~~~~~~~l~~--~G~iv~~g~~~  272 (347)
T 2hcy_A          238 --GAHGVINVSVSE---------------------------AAIEASTRYVRA--NGTTVLVGMPA  272 (347)
T ss_dssp             --CEEEEEECSSCH---------------------------HHHHHHTTSEEE--EEEEEECCCCT
T ss_pred             --CCCEEEECCCcH---------------------------HHHHHHHHHHhc--CCEEEEEeCCC
Confidence              799999999831                           123455566654  47899888755

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.56  E-value=7.9e-08  Score=78.15  Aligned_cols=81  Identities=17%  Similarity=0.320  Sum_probs=58.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+||+||||..+++.+...|++|+++++++++.+...+++    +    .. ...|.++.+++.+.+.++.. 
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~~~~~~~~-  223 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF----G----FD-DAFNYKEESDLTAALKRCFP-  223 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS----C----CS-EEEETTSCSCSHHHHHHHCT-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C----Cc-eEEecCCHHHHHHHHHHHhC-
Confidence            36899999999999999999999999999999999876655443222    1    11 23477765445444444322 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                       +++|++|+|+|
T Consensus       224 -~~~d~vi~~~g  234 (345)
T 2j3h_A          224 -NGIDIYFENVG  234 (345)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -CCCcEEEECCC
Confidence             47999999998

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.56  E-value=2.4e-07  Score=65.44  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++++++|+|+ |.+|.++++.|.++|++|++++++++..+...+.         .+.++.+|.++++.+.++      ..
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~---------~~~~~~gd~~~~~~l~~~------~~   68 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE---------GFDAVIADPTDESFYRSL------DL   68 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---------TCEEEECCTTCHHHHHHS------CC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC---------CCcEEECCCCCHHHHHhC------Cc
Confidence            4578999998 6799999999999999999999987665544321         356788999999877654      22


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                      .+.|++|.+.+
T Consensus        69 ~~~d~vi~~~~   79 (141)
T 3llv_A           69 EGVSAVLITGS   79 (141)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            47899998776

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.56  E-value=8e-08  Score=67.77  Aligned_cols=77  Identities=18%  Similarity=0.296  Sum_probs=56.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++++++|+|+ |++|..+++.|.+.|++|++++++++..+..    ...     ....+.+|.++++.+.++      .
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~-----~~~~~~~d~~~~~~l~~~------~   67 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY-----ATHAVIANATEENELLSL------G   67 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTT-----CSEEEECCTTCHHHHHTT------T
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh-----CCEEEEeCCCCHHHHHhc------C
Confidence            56688999998 9999999999999999999999876543322    111     235677899987655433      2


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .++.|++|++++.
T Consensus        68 ~~~~d~vi~~~~~   80 (144)
T 2hmt_A           68 IRNFEYVIVAIGA   80 (144)
T ss_dssp             GGGCSEEEECCCS
T ss_pred             CCCCCEEEECCCC
Confidence            3478999999873

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.53  E-value=1.4e-07  Score=76.05  Aligned_cols=104  Identities=16%  Similarity=0.205  Sum_probs=72.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|++++|+||+||||..+++.+...|++|+++++++++.+...+ +.   .   .   ...|.++.+..+++.+...  .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g---~---~---~~~~~~~~~~~~~~~~~~~--~  207 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG---A---W---QVINYREEDLVERLKEITG--G  207 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTTSCHHHHHHHHTT--T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---C---C---EEEECCCccHHHHHHHHhC--C
Confidence            58999999999999999999999999999999998766554433 21   1   1   2357777655444433221  1


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      +++|++|+|+|.  .                          ..+..++.+++  .|+++.+++..+
T Consensus       208 ~~~D~vi~~~g~--~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~  243 (327)
T 1qor_A          208 KKVRVVYDSVGR--D--------------------------TWERSLDCLQR--RGLMVSFGNSSG  243 (327)
T ss_dssp             CCEEEEEECSCG--G--------------------------GHHHHHHTEEE--EEEEEECCCTTC
T ss_pred             CCceEEEECCch--H--------------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence            369999999991  1                          02445566654  478998887544

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.53  E-value=4.5e-07  Score=73.40  Aligned_cols=150  Identities=12%  Similarity=0.046  Sum_probs=96.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecC----CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-------KVLIADIK----DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIEN   82 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~----~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~   82 (214)
                      .+++||||+|.||.+++..|+.+|.       .|++.+++    +++++....++.+...   ..   ..|+....+..+
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~---~~---~~~i~~~~~~~~   79 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF---PL---LAGMTAHADPMT   79 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC---TT---EEEEEEESSHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc---cc---cCcEEEecCcHH
Confidence            5799999999999999999999885       68888887    4444444444443211   11   134444334444


Q ss_pred             HHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc----
Q 044923           83 AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV----  158 (214)
Q Consensus        83 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----  158 (214)
                      .++       +.|++|+.||....     ...+.   ...+..|+.....+.+.+..+..  ..+++|++|.....    
T Consensus        80 al~-------~aD~Vi~~ag~~~~-----~g~~r---~dl~~~N~~i~~~i~~~i~~~~~--p~a~ii~~SNPv~~~t~~  142 (329)
T 1b8p_A           80 AFK-------DADVALLVGARPRG-----PGMER---KDLLEANAQIFTVQGKAIDAVAS--RNIKVLVVGNPANTNAYI  142 (329)
T ss_dssp             HTT-------TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHSC--TTCEEEECSSSHHHHHHH
T ss_pred             HhC-------CCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEccCchHHHHHH
Confidence            444       78999999997532     12233   34678888666666665555421  24689999884421    


Q ss_pred             ---c--CCCCCccchhhHHHHHHHHHHHHHHHc
Q 044923          159 ---I--GGVTSHAYTSSKHGVVGLMKNTAVELG  186 (214)
Q Consensus       159 ---~--~~~~~~~y~~sK~a~~~l~~~la~e~~  186 (214)
                         .  +.|....|+.++.--..+...++..++
T Consensus       143 ~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          143 AMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence               1  334445688887766777888887763

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.52  E-value=2e-07  Score=75.47  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=58.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+||||.++++.+...|++|+++++++++.+...+ +.   .   .   ...|.++.+..+++.+...  
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g---~---~---~~~d~~~~~~~~~i~~~~~--  211 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG---C---H---HTINYSTQDFAEVVREITG--  211 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTTSCHHHHHHHHHT--
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---C---C---EEEECCCHHHHHHHHHHhC--
Confidence            368999999999999999999999999999999998766654432 21   1   1   2357776554444333221  


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      ..++|++|+|+|.
T Consensus       212 ~~~~d~vi~~~g~  224 (333)
T 1wly_A          212 GKGVDVVYDSIGK  224 (333)
T ss_dssp             TCCEEEEEECSCT
T ss_pred             CCCCeEEEECCcH
Confidence            1369999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.51  E-value=2.6e-07  Score=74.78  Aligned_cols=80  Identities=20%  Similarity=0.314  Sum_probs=58.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||+||||..+++.+...|++|+++++++++.+...+++.        . ....|.++.+..+.+.+..   
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g--------~-~~~~~~~~~~~~~~~~~~~---  215 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG--------F-DGAIDYKNEDLAAGLKREC---  215 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC--------C-SEEEETTTSCHHHHHHHHC---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--------C-CEEEECCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999998876655433331        1 1235776654433333221   


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      .+++|++|+|+|
T Consensus       216 ~~~~d~vi~~~g  227 (336)
T 4b7c_A          216 PKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            247999999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.49  E-value=2.1e-07  Score=76.07  Aligned_cols=79  Identities=19%  Similarity=0.313  Sum_probs=56.2

Q ss_pred             CC--cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           12 QG--KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        12 ~~--k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .|  +++||+||+||||..+++.+...|+ +|+++++++++.+...+++    +    .. ..+|.++.+..+.+ .+..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~~-~~~~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----G----FD-AAINYKKDNVAEQL-RESC  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----C----CS-EEEETTTSCHHHHH-HHHC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----C----Cc-eEEecCchHHHHHH-HHhc
Confidence            46  9999999999999999999999999 9999999876655444322    1    11 23577764433322 2221


Q ss_pred             HHcCCccEEEeCCc
Q 044923           89 SQYGKLDIMFNNAG  102 (214)
Q Consensus        89 ~~~g~id~li~~ag  102 (214)
                      .  +++|++|+|+|
T Consensus       228 ~--~~~d~vi~~~G  239 (357)
T 2zb4_A          228 P--AGVDVYFDNVG  239 (357)
T ss_dssp             T--TCEEEEEESCC
T ss_pred             C--CCCCEEEECCC
Confidence            1  26999999999

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.46  E-value=3.8e-07  Score=74.49  Aligned_cols=81  Identities=19%  Similarity=0.237  Sum_probs=58.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+||||..+++.+...|++|+++++++++.+.. +++.   .   .   ..+|.++.+..+++.+.. . 
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g---~---~---~~~~~~~~~~~~~~~~~~-~-  228 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG---A---A---AGFNYKKEDFSEATLKFT-K-  228 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT---C---S---EEEETTTSCHHHHHHHHT-T-
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC---C---c---EEEecCChHHHHHHHHHh-c-
Confidence            3689999999999999999999999999999999987766554 2221   1   1   235777655444332211 1 


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++|+|+|.
T Consensus       229 ~~~~d~vi~~~G~  241 (354)
T 2j8z_A          229 GAGVNLILDCIGG  241 (354)
T ss_dssp             TSCEEEEEESSCG
T ss_pred             CCCceEEEECCCc
Confidence            1369999999994

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.46  E-value=1e-06  Score=70.57  Aligned_cols=84  Identities=14%  Similarity=0.283  Sum_probs=61.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC---CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK---DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~---~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+..|+   .++++++.+++....    .+.+...+..+.+...+.+
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~----~~~v~~~~~~~l~~~~~~l  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT----DCVVTVTDLADQHAFTEAL  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS----SCEEEEEETTCHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc----CcceEEechHhhhhhHhhc
Confidence            3578999999997 8999999999999998 69999999   666777777665432    2334455666654333333


Q ss_pred             HHHHHHcCCccEEEeCCccc
Q 044923           85 NTAVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~  104 (214)
                      .       ..|++||+.+..
T Consensus       219 ~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          219 A-------SADILTNGTKVG  231 (312)
T ss_dssp             H-------HCSEEEECSSTT
T ss_pred             c-------CceEEEECCcCC
Confidence            3       569999997764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.43  E-value=5.1e-07  Score=73.66  Aligned_cols=80  Identities=16%  Similarity=0.192  Sum_probs=56.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+||||..+++.+...|++|+++++++++.+.. +++.        .. ..+|.++.+..+++.+..  .
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g--------a~-~~~d~~~~~~~~~~~~~~--~  236 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG--------AH-EVFNHREVNYIDKIKKYV--G  236 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT--------CS-EEEETTSTTHHHHHHHHH--C
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcC--------CC-EEEeCCCchHHHHHHHHc--C
Confidence            3589999999999999999999999999999999987665532 2221        11 235777654443332221  1


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      .+++|++|+|+|
T Consensus       237 ~~~~D~vi~~~G  248 (351)
T 1yb5_A          237 EKGIDIIIEMLA  248 (351)
T ss_dssp             TTCEEEEEESCH
T ss_pred             CCCcEEEEECCC
Confidence            127999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.42  E-value=7.5e-07  Score=70.54  Aligned_cols=81  Identities=20%  Similarity=0.320  Sum_probs=60.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+..|+.++.+++.+.+.....   .+.+...+..+   +.+.+.   
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~---~~~i~~~~~~~---l~~~l~---  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG---REAVVGVDARG---IEDVIA---  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT---SCCEEEECSTT---HHHHHH---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC---CceEEEcCHHH---HHHHHh---
Confidence            578999999998 7999999999999998 699999999988888887764322   12333444333   333333   


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                          ..|++||+.+..
T Consensus       194 ----~~DiVInaTp~G  205 (283)
T 3jyo_A          194 ----AADGVVNATPMG  205 (283)
T ss_dssp             ----HSSEEEECSSTT
T ss_pred             ----cCCEEEECCCCC
Confidence                469999998753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.37  E-value=2.6e-06  Score=71.70  Aligned_cols=110  Identities=20%  Similarity=0.290  Sum_probs=73.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEE--eeCC---------CHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH--CDVT---------KEKD   79 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~--~D~~---------~~~~   79 (214)
                      -.|+++||+||+||||..+++.+...|++|+++.+++++.+... ++.   .   ...+..  .|+.         +.++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~lG---a---~~~i~~~~~~~~~~~~~~~~~~~~~  291 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALG---C---DLVINRAELGITDDIADDPRRVVET  291 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT---C---CCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC---C---CEEEecccccccccccccccccchh
Confidence            46899999999999999999999999999999988776655442 221   1   111111  1221         1244


Q ss_pred             HHHHHHHHHHHcC-CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           80 IENAVNTAVSQYG-KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        80 ~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      +.++.+++.+..+ ++|++|+++|..                            ..+..++.+++  .|++|.+++..+
T Consensus       292 ~~~~~~~v~~~~g~g~Dvvid~~G~~----------------------------~~~~~~~~l~~--~G~iv~~G~~~~  340 (447)
T 4a0s_A          292 GRKLAKLVVEKAGREPDIVFEHTGRV----------------------------TFGLSVIVARR--GGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECSCHH----------------------------HHHHHHHHSCT--TCEEEESCCTTC
T ss_pred             hhHHHHHHHHHhCCCceEEEECCCch----------------------------HHHHHHHHHhc--CCEEEEEecCCC
Confidence            5556666766554 699999999831                            01334555544  588999887654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.37  E-value=8.4e-07  Score=72.17  Aligned_cols=80  Identities=14%  Similarity=0.256  Sum_probs=56.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|+++||+|++||||..+++.+... |++|+++++++++.+... ++.   .   .   ...|.++.+..+++. ++.+.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g---~---~---~~~~~~~~~~~~~~~-~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAG---A---D---YVINASMQDPLAEIR-RITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHT---C---S---EEEETTTSCHHHHHH-HHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC---C---C---EEecCCCccHHHHHH-HHhcC
Confidence            6899999999999999999999999 999999998876665442 221   1   1   224666644333222 22111


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                       +++|++|+++|.
T Consensus       239 -~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 -KGVDAVIDLNNS  250 (347)
T ss_dssp             -SCEEEEEESCCC
T ss_pred             -CCceEEEECCCC
Confidence             589999999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.36  E-value=1.8e-06  Score=70.69  Aligned_cols=100  Identities=18%  Similarity=0.287  Sum_probs=67.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC---cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD---DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++|++++|+|+ ||||..+++.+...|++|+++++++   ++.+.. +++        ....+  | .+  ++.+.+.+ 
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~--------ga~~v--~-~~--~~~~~~~~-  242 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET--------KTNYY--N-SS--NGYDKLKD-  242 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH--------TCEEE--E-CT--TCSHHHHH-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh--------CCcee--c-hH--HHHHHHHH-
Confidence            45999999999 9999999999999999999999987   554332 222        12333  6 54  22222222 


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHH-HHHHHhhccCCCCeEEEecCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGT-KHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      . . +++|++|+++|...                           .+ +..++.+++  .|++|+++...+
T Consensus       243 ~-~-~~~d~vid~~g~~~---------------------------~~~~~~~~~l~~--~G~iv~~g~~~~  282 (366)
T 2cdc_A          243 S-V-GKFDVIIDATGADV---------------------------NILGNVIPLLGR--NGVLGLFGFSTS  282 (366)
T ss_dssp             H-H-CCEEEEEECCCCCT---------------------------HHHHHHGGGEEE--EEEEEECSCCCS
T ss_pred             h-C-CCCCEEEECCCChH---------------------------HHHHHHHHHHhc--CCEEEEEecCCC
Confidence            2 2 68999999998421                           12 455666654  478988876543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.34  E-value=1.8e-06  Score=70.45  Aligned_cols=80  Identities=21%  Similarity=0.243  Sum_probs=58.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+||+||||..+++.+...|++|+++++++++.+...+ +.   .   .   ...|.++.+..+.+.+ ..  
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG---a---~---~~~~~~~~~~~~~~~~-~~--  232 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LG---A---K---RGINYRSEDFAAVIKA-ET--  232 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTTSCHHHHHHH-HH--
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC---C---C---EEEeCCchHHHHHHHH-Hh--
Confidence            368999999999999999999999999999999998877655433 21   1   1   1246666544433333 22  


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++|+++|.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence            4579999999983

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.30  E-value=1.9e-06  Score=61.86  Aligned_cols=81  Identities=22%  Similarity=0.261  Sum_probs=57.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |+.+..+++++|.|+ |.+|..+++.|.+.|++|+++.|+++..+.+.+   .     .....+..|.++++.+.+.   
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~-----~g~~~~~~d~~~~~~l~~~---   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E-----FSGFTVVGDAAEFETLKEC---   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T-----CCSEEEESCTTSHHHHHTT---
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c-----CCCcEEEecCCCHHHHHHc---
Confidence            566778899999996 999999999999999999999998766543321   1     1245667888886544322   


Q ss_pred             HHHHcCCccEEEeCCc
Q 044923           87 AVSQYGKLDIMFNNAG  102 (214)
Q Consensus        87 ~~~~~g~id~li~~ag  102 (214)
                         ...+.|++|.+.+
T Consensus        81 ---~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 ---GMEKADMVFAFTN   93 (155)
T ss_dssp             ---TGGGCSEEEECSS
T ss_pred             ---CcccCCEEEEEeC
Confidence               1236899999877

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.29  E-value=3.6e-06  Score=60.23  Aligned_cols=78  Identities=8%  Similarity=0.112  Sum_probs=57.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .++.++|.|+ |.+|+.+++.|.+.|++|+++.+++ +..+.+.+...      ..+.++.+|.++++.+.++      .
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a------~   68 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG------DNADVIPGDSNDSSVLKKA------G   68 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC------TTCEEEESCTTSHHHHHHH------T
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc------CCCeEEEcCCCCHHHHHHc------C
Confidence            3567888886 9999999999999999999999874 43333333221      1367889999998876554      1


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..+.|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (153)
T 1id1_A           69 IDRCRAILALSD   80 (153)
T ss_dssp             TTTCSEEEECSS
T ss_pred             hhhCCEEEEecC
Confidence            237899988876

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.28  E-value=1.6e-05  Score=64.57  Aligned_cols=79  Identities=11%  Similarity=0.102  Sum_probs=54.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++++||+||+|+||...++.+...|++|+++++++++.+...+ +.   .   .   ...|..+.+..+.+.+ .... .
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~G---a---~---~~~~~~~~~~~~~v~~-~~~~-~  232 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-IG---A---A---HVLNEKAPDFEATLRE-VMKA-E  232 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-HT---C---S---EEEETTSTTHHHHHHH-HHHH-H
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---C---C---EEEECCcHHHHHHHHH-HhcC-C
Confidence            3899999999999999999999999999999998877655432 21   1   1   1245555443333322 2211 2


Q ss_pred             CccEEEeCCcc
Q 044923           93 KLDIMFNNAGI  103 (214)
Q Consensus        93 ~id~li~~ag~  103 (214)
                      ++|++|+++|.
T Consensus       233 g~D~vid~~g~  243 (349)
T 3pi7_A          233 QPRIFLDAVTG  243 (349)
T ss_dssp             CCCEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999983

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.25  E-value=3.4e-06  Score=68.42  Aligned_cols=77  Identities=13%  Similarity=0.145  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|+++||+|++||||..+++.+...|++|+++++++++.+...+ +.   .   .   ...|.++.+..    +++.+..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g---a---~---~~~d~~~~~~~----~~~~~~~  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LG---A---D---ETVNYTHPDWP----KEVRRLT  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTSTTHH----HHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC---C---C---EEEcCCcccHH----HHHHHHh
Confidence            68999999999999999999999999999999998776655432 21   1   1   12577765422    2233322


Q ss_pred             --CCccEEEeCCc
Q 044923           92 --GKLDIMFNNAG  102 (214)
Q Consensus        92 --g~id~li~~ag  102 (214)
                        +++|++|+++|
T Consensus       232 ~~~~~d~vi~~~g  244 (343)
T 2eih_A          232 GGKGADKVVDHTG  244 (343)
T ss_dssp             TTTCEEEEEESSC
T ss_pred             CCCCceEEEECCC
Confidence              37999999999

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.24  E-value=8.4e-07  Score=69.88  Aligned_cols=77  Identities=12%  Similarity=0.118  Sum_probs=57.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++++|+++|+|+ ||+|++++..|++.|++|++..|+.++++++.+.+....    .+.  .+|+   +++.       +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~----~~~--~~~~---~~~~-------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQ--AVSM---DSIP-------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEE--EEEG---GGCC-------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC----CeE--EeeH---HHhc-------c
Confidence            578999999998 799999999999999999999999888888777664321    121  2333   1110       1


Q ss_pred             HcCCccEEEeCCcccC
Q 044923           90 QYGKLDIMFNNAGIVD  105 (214)
Q Consensus        90 ~~g~id~li~~ag~~~  105 (214)
                        +..|++|++++...
T Consensus       179 --~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 --QTYDLVINATSAGL  192 (272)
T ss_dssp             --SCCSEEEECCCC--
T ss_pred             --CCCCEEEECCCCCC
Confidence              47999999999753

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.24  E-value=2.5e-06  Score=69.90  Aligned_cols=77  Identities=19%  Similarity=0.310  Sum_probs=56.8

Q ss_pred             CccCCc--EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            9 PRLQGK--VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         9 ~~~~~k--~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      .+++||  +++|.|| |++|+.+++.|++ .++|.+.+++.++++...+          .+..+.+|++|.+++.++++ 
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~----------~~~~~~~d~~d~~~l~~~~~-   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE----------FATPLKVDASNFDKLVEVMK-   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT----------TSEEEECCTTCHHHHHHHHT-
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc----------cCCcEEEecCCHHHHHHHHh-
Confidence            345554  5999998 9999999999875 4789999988766544321          34667899999999888876 


Q ss_pred             HHHHcCCccEEEeCCccc
Q 044923           87 AVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~  104 (214)
                            +.|+||++++..
T Consensus        77 ------~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ------EFELVIGALPGF   88 (365)
T ss_dssp             ------TCSEEEECCCGG
T ss_pred             ------CCCEEEEecCCc
Confidence                  789999998754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.22  E-value=2.6e-05  Score=62.54  Aligned_cols=149  Identities=13%  Similarity=0.132  Sum_probs=89.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEec--CCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADI--KDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r--~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||||+|++|..++..|+.+|.  .+.+.++  ++++++....++.+..... ..+.+...|    +++.+.+     
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al-----   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRII-----   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGG-----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHh-----
Confidence            589999999999999999998884  4777887  5444443333333211100 122222211    1122222     


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------CC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------GG  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~~  161 (214)
                        .+.|++|+.||.....     ..+.   ...++.|+.+...+.+.+..+-    .+.++++|......        +.
T Consensus        73 --~gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~----~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           73 --DESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEIC----DTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             --TTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHC----CCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             --CCCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHhC----CeEEEEecCcHHHHHHHHHHhhCc
Confidence              3799999999975321     2233   3458889877777666665543    34555555533321        35


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHHc
Q 044923          162 VTSHAYTS-SKHGVVGLMKNTAVELG  186 (214)
Q Consensus       162 ~~~~~y~~-sK~a~~~l~~~la~e~~  186 (214)
                      |....++. +..-...+...++..++
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            55567787 66667777777877763

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.22  E-value=5.2e-06  Score=58.01  Aligned_cols=75  Identities=27%  Similarity=0.451  Sum_probs=54.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +++++|+|+ |.+|..+++.|.+.|++|++++++++..+...+..        .+.++..|.++++.+.+.      ...
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--------~~~~~~~d~~~~~~l~~~------~~~   68 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--------DALVINGDCTKIKTLEDA------GIE   68 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------SSEEEESCTTSHHHHHHT------TTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--------CcEEEEcCCCCHHHHHHc------Ccc
Confidence            457889987 99999999999999999999998876554433221        245677898887665321      134


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      +.|++|.+.+
T Consensus        69 ~~d~vi~~~~   78 (140)
T 1lss_A           69 DADMYIAVTG   78 (140)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEeeC
Confidence            7899999975

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.22  E-value=2.6e-05  Score=62.94  Aligned_cols=147  Identities=18%  Similarity=0.166  Sum_probs=85.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+++||||+|.+|..++..|+++|  ..|++.+++++  +....++.....   ... +.. +++..+..+.++      
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~---~~~-v~~-~~~t~d~~~al~------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDT---GAV-VRG-FLGQQQLEAALT------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCS---SCE-EEE-EESHHHHHHHHT------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccc---cce-EEE-EeCCCCHHHHcC------
Confidence            579999999999999999999998  67888887765  222233333211   111 111 233444544444      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc------------c
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV------------I  159 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~  159 (214)
                       +.|++|++||.....     ..+.   ...+..|+.+...+.+.+.++-   ..+.++++|.....            .
T Consensus        76 -gaDvVi~~ag~~~~~-----g~~r---~dl~~~N~~~~~~i~~~i~~~~---p~~~viv~SNPv~~~~~~~t~~~~~~~  143 (326)
T 1smk_A           76 -GMDLIIVPAGVPRKP-----GMTR---DDLFKINAGIVKTLCEGIAKCC---PRAIVNLISNPVNSTVPIAAEVFKKAG  143 (326)
T ss_dssp             -TCSEEEECCCCCCCS-----SCCC---SHHHHHHHHHHHHHHHHHHHHC---TTSEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred             -CCCEEEEcCCcCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCchHHHHHHHHHHHHHcc
Confidence             789999999975321     1122   2447788766666666555533   23455555444433            1


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                      +.|.....+.+-.--..+...++..+
T Consensus       144 ~~p~~rviG~~~Ld~~r~~~~la~~l  169 (326)
T 1smk_A          144 TYDPKRLLGVTMLDVVRANTFVAEVL  169 (326)
T ss_dssp             CCCTTSEEECCHHHHHHHHHHHHHHH
T ss_pred             CCCcccEEEEeehHHHHHHHHHHHHh
Confidence            24444455553333455666666665

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=98.21  E-value=5.2e-06  Score=66.26  Aligned_cols=96  Identities=18%  Similarity=0.227  Sum_probs=62.1

Q ss_pred             ccCCcE-EEEecCCC-----------------h-HHHHHHHHHHHcCCeEEEEecCCcchhhH--------HHHhhccCC
Q 044923           10 RLQGKV-ALITGGAG-----------------S-IGECAARLFSKHGAKVLIADIKDDLGESV--------CEDISSSSS   62 (214)
Q Consensus        10 ~~~~k~-~lItGas~-----------------g-IG~~ia~~L~~~g~~vi~~~r~~~~~~~~--------~~~~~~~~~   62 (214)
                      ++.||+ ||||+|..                 | .|.++|++++++|+.|+++.+......-.        .+.+.....
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            367888 99995554                 5 99999999999999999998754321100        111111111


Q ss_pred             CCCCceEEEeeCCCHHHHHHHHHHH------------------------------HHHcCCccEEEeCCcccC
Q 044923           63 SANGCSYVHCDVTKEKDIENAVNTA------------------------------VSQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        63 ~~~~v~~~~~D~~~~~~~~~~~~~~------------------------------~~~~g~id~li~~ag~~~  105 (214)
                      ....+..+..|+...+++.+++.+.                              .+.++..|++|.+|++..
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            1113446677777766666665443                              234578999999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.20  E-value=3.9e-06  Score=68.02  Aligned_cols=79  Identities=15%  Similarity=0.149  Sum_probs=57.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||++|||..+++.+...|++|+++++++++.+...+ +..      .   ...|.++.+..+    ++.+.
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga------~---~~~~~~~~~~~~----~~~~~  208 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGA------A---YVIDTSTAPLYE----TVMEL  208 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC------S---EEEETTTSCHHH----HHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCC------c---EEEeCCcccHHH----HHHHH
Confidence            468999999999999999999998899999999998887765543 211      1   124665544333    23332


Q ss_pred             c--CCccEEEeCCcc
Q 044923           91 Y--GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~--g~id~li~~ag~  103 (214)
                      .  .++|++|+++|.
T Consensus       209 ~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          209 TNGIGADAAIDSIGG  223 (340)
T ss_dssp             TTTSCEEEEEESSCH
T ss_pred             hCCCCCcEEEECCCC
Confidence            2  279999999984

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.18  E-value=3.1e-06  Score=68.14  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=56.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||+|+||..+++.+...|++|+++.+++++.+...+ +.   .   .   ...|.++.+..+.    +.+.
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~G---a---~---~~~~~~~~~~~~~----~~~~  204 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LG---A---W---ETIDYSHEDVAKR----VLEL  204 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTTSCHHHH----HHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---C---C---EEEeCCCccHHHH----HHHH
Confidence            368999999999999999999999999999999998876654432 21   1   1   2246665443333    3333


Q ss_pred             c--CCccEEEeCCcc
Q 044923           91 Y--GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~--g~id~li~~ag~  103 (214)
                      .  .++|++|+++|.
T Consensus       205 ~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          205 TDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTTCCEEEEEESSCG
T ss_pred             hCCCCceEEEECCCh
Confidence            2  269999999994

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.18  E-value=3.2e-06  Score=68.35  Aligned_cols=79  Identities=18%  Similarity=0.268  Sum_probs=56.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||+||||..+++.+...|++|+++++++++.+... ++.   .   .   ...|.++.+..+.    +.+.
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g---a---~---~~~~~~~~~~~~~----~~~~  212 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYG---A---E---YLINASKEDILRQ----VLKF  212 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTT---C---S---EEEETTTSCHHHH----HHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---C---c---EEEeCCCchHHHH----HHHH
Confidence            46899999999999999999999999999999999877665332 221   1   1   2346655443333    3332


Q ss_pred             c--CCccEEEeCCcc
Q 044923           91 Y--GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~--g~id~li~~ag~  103 (214)
                      .  .++|++|+++|.
T Consensus       213 ~~~~g~D~vid~~g~  227 (334)
T 3qwb_A          213 TNGKGVDASFDSVGK  227 (334)
T ss_dssp             TTTSCEEEEEECCGG
T ss_pred             hCCCCceEEEECCCh
Confidence            2  369999999994

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.16  E-value=1.4e-05  Score=64.66  Aligned_cols=102  Identities=19%  Similarity=0.195  Sum_probs=68.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|+++||+|+ ||||..+++.+...|++|+++++++++.+... ++.        .. ...|.++.+-.+. +.++.   
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lG--------a~-~~~d~~~~~~~~~-~~~~~---  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELG--------AD-LVVNPLKEDAAKF-MKEKV---  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTT--------CS-EEECTTTSCHHHH-HHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCC--------CC-EEecCCCccHHHH-HHHHh---
Confidence            5899999999 88999999999999999999999877665443 221        11 2257665432222 22222   


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      +++|++|+++|..                           ...+..++.+++  .|+++.+++...
T Consensus       229 ~~~d~vid~~g~~---------------------------~~~~~~~~~l~~--~G~~v~~g~~~~  265 (339)
T 1rjw_A          229 GGVHAAVVTAVSK---------------------------PAFQSAYNSIRR--GGACVLVGLPPE  265 (339)
T ss_dssp             SSEEEEEESSCCH---------------------------HHHHHHHHHEEE--EEEEEECCCCSS
T ss_pred             CCCCEEEECCCCH---------------------------HHHHHHHHHhhc--CCEEEEecccCC
Confidence            5899999999841                           123445566655  378888876543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.14  E-value=3.9e-06  Score=66.87  Aligned_cols=77  Identities=17%  Similarity=0.213  Sum_probs=56.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+..|+.++++++.+.+....    .      ++.+.++       +.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~----~------~~~~~~~-------~~  199 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR----S------AYFSLAE-------AE  199 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS----C------CEECHHH-------HH
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc----C------ceeeHHH-------HH
Confidence            578999999998 7999999999999998 89999999888777766553211    0      1112222       22


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                      +.....|++|++.+..
T Consensus       200 ~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          200 TRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HTGGGCSEEEECSCTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            3345789999999875

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.13  E-value=4e-05  Score=61.16  Aligned_cols=146  Identities=13%  Similarity=0.089  Sum_probs=83.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEec--CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADI--KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r--~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++||||+|.+|..++..|+.++.  .+.+.++  ++++++....++.+......++.+.. |  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            589999999999999999999875  4888887  65544443444433211111233322 2  2221           


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------CCC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------GGV  162 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~~~  162 (214)
                      +.+.|++|+.||....     ...+..   ..+..|+.....+.+.+..+   ...+.++++|......        +.|
T Consensus        68 ~~~aDvVi~~ag~~~~-----~g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SNPv~~~~~~~~~~~~~p  136 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQ-----PGQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTSNPVDLLNRHLYEAGDRS  136 (303)
T ss_dssp             GTTCSEEEECCCCCCC-----TTCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECCSSHHHHHHHHHHHSSSC
T ss_pred             hCCCCEEEEcCCCCCC-----CCCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCChHHHHHHHHHHHcCCC
Confidence            2378999999997432     122333   45788876555555554443   1234455544433221        234


Q ss_pred             CCccchh-hHHHHHHHHHHHHHHH
Q 044923          163 TSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       163 ~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      .....+. +-.-...+-..++..+
T Consensus       137 ~~rviG~gt~Ld~~r~~~~la~~l  160 (303)
T 1o6z_A          137 REQVIGFGGRLDSARFRYVLSEEF  160 (303)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHH
T ss_pred             HHHeeecccchhHHHHHHHHHHHh
Confidence            4445555 3333455666666665

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.10  E-value=1.6e-05  Score=65.09  Aligned_cols=78  Identities=24%  Similarity=0.279  Sum_probs=57.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++++++|+|+ ||+|+++++.+...|++|++.+|++++++.+.+....      .+   .++..+.+++.+.+.    
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~------~~---~~~~~~~~~~~~~~~----  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS------RV---ELLYSNSAEIETAVA----  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GS---EEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc------ee---EeeeCCHHHHHHHHc----
Confidence            367799999999 9999999999999999999999998777666544321      11   122234444443332    


Q ss_pred             HcCCccEEEeCCccc
Q 044923           90 QYGKLDIMFNNAGIV  104 (214)
Q Consensus        90 ~~g~id~li~~ag~~  104 (214)
                         ..|++|++++..
T Consensus       230 ---~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 ---EADLLIGAVLVP  241 (361)
T ss_dssp             ---TCSEEEECCCCT
T ss_pred             ---CCCEEEECCCcC
Confidence               789999999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.08  E-value=1.6e-05  Score=64.51  Aligned_cols=78  Identities=22%  Similarity=0.305  Sum_probs=54.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+||+||||..+++.+...|++|+++.+++++.+...+ +.   .   . .+  .|..  +++   .+++.+.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g---a---~-~v--~~~~--~~~---~~~v~~~  222 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VG---A---D-IV--LPLE--EGW---AKAVREA  222 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT---C---S-EE--EESS--TTH---HHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC---C---c-EE--ecCc--hhH---HHHHHHH
Confidence            368999999999999999999999999999999998877654433 21   1   1 12  2443  222   2333333


Q ss_pred             c-C-CccEEEeCCcc
Q 044923           91 Y-G-KLDIMFNNAGI  103 (214)
Q Consensus        91 ~-g-~id~li~~ag~  103 (214)
                      . + ++|++|+++|.
T Consensus       223 ~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          223 TGGAGVDMVVDPIGG  237 (342)
T ss_dssp             TTTSCEEEEEESCC-
T ss_pred             hCCCCceEEEECCch
Confidence            3 2 69999999994

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.00  E-value=2.2e-05  Score=64.65  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=58.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+.+++++|+|+ |+||..+++.+...|++|++.+++.++++...+.+..      .+   .+|.++.+++.+++.    
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~------~~---~~~~~~~~~l~~~l~----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG------RI---HTRYSSAYELEGAVK----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT------SS---EEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC------ee---EeccCCHHHHHHHHc----
Confidence            578999999998 9999999999999999999999988766554433311      11   234455555555543    


Q ss_pred             HcCCccEEEeCCccc
Q 044923           90 QYGKLDIMFNNAGIV  104 (214)
Q Consensus        90 ~~g~id~li~~ag~~  104 (214)
                         ..|++|++++..
T Consensus       231 ---~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 ---RADLVIGAVLVP  242 (377)
T ss_dssp             ---HCSEEEECCCCT
T ss_pred             ---CCCEEEECCCcC
Confidence               579999998853

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.99  E-value=2.2e-05  Score=62.45  Aligned_cols=73  Identities=18%  Similarity=0.274  Sum_probs=52.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~   90 (214)
                      .|++++|+|++||+|..+++.+...|++|+.+++++++.+...+ +.        .. ...|..+ .+..+    ++   
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g--------a~-~~~~~~~~~~~~~----~~---  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LG--------AE-EAATYAEVPERAK----AW---  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TT--------CS-EEEEGGGHHHHHH----HT---
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC--------CC-EEEECCcchhHHH----Hh---
Confidence            58999999999999999999999999999999998877655432 21        11 1245554 32222    22   


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                       +++|++|+ +|.
T Consensus       188 -~~~d~vid-~g~  198 (302)
T 1iz0_A          188 -GGLDLVLE-VRG  198 (302)
T ss_dssp             -TSEEEEEE-CSC
T ss_pred             -cCceEEEE-CCH
Confidence             58999999 873

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.99  E-value=1.3e-05  Score=59.06  Aligned_cols=78  Identities=19%  Similarity=0.221  Sum_probs=57.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++.+++++|.| .|.+|..+++.|.+. |++|+++.+++++.+...+    .     .+..+.+|.++++.+.++     
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~-----g~~~~~gd~~~~~~l~~~-----  100 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E-----GRNVISGDATDPDFWERI-----  100 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T-----TCCEEECCTTCHHHHHTB-----
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C-----CCCEEEcCCCCHHHHHhc-----
Confidence            45577888998 599999999999999 9999999998766544322    1     245677899987755432     


Q ss_pred             HHcCCccEEEeCCc
Q 044923           89 SQYGKLDIMFNNAG  102 (214)
Q Consensus        89 ~~~g~id~li~~ag  102 (214)
                      ....+.|++|.+.+
T Consensus       101 ~~~~~ad~vi~~~~  114 (183)
T 3c85_A          101 LDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSCCCCCEEEECCS
T ss_pred             cCCCCCCEEEEeCC
Confidence            01237899998766

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.96  E-value=1.2e-05  Score=67.83  Aligned_cols=92  Identities=21%  Similarity=0.303  Sum_probs=62.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC---CCCCCce-EEEeeCCCHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS---SSANGCS-YVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~---~~~~~v~-~~~~D~~~~~~~~~~~~~   86 (214)
                      -.|++++|+||+|+||...++.+...|++|+++.+++++++.+. ++....   ....... ...-+.++.++++++.++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~-~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-hhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence            46899999999999999999999999999999888776665443 222100   0000000 001113456677777788


Q ss_pred             HHHHcC--CccEEEeCCcc
Q 044923           87 AVSQYG--KLDIMFNNAGI  103 (214)
Q Consensus        87 ~~~~~g--~id~li~~ag~  103 (214)
                      +++..+  ++|++|.++|.
T Consensus       306 i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHTSCCEEEEEECSCH
T ss_pred             HHHHhCCCCCcEEEEcCCc
Confidence            877653  79999999983

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.95  E-value=4.6e-05  Score=53.58  Aligned_cols=73  Identities=14%  Similarity=0.163  Sum_probs=56.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +.++|.|+ |-+|..+++.|.+.|++|+++.++++..+...+    .     .+.++.+|.++++.+.++      ...+
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~-----g~~~i~gd~~~~~~l~~a------~i~~   71 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R-----GVRAVLGNAANEEIMQLA------HLEC   71 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T-----TCEEEESCTTSHHHHHHT------TGGG
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c-----CCCEEECCCCCHHHHHhc------Cccc
Confidence            56778887 789999999999999999999999876654432    1     356788999998876543      1236


Q ss_pred             ccEEEeCCc
Q 044923           94 LDIMFNNAG  102 (214)
Q Consensus        94 id~li~~ag  102 (214)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (140)
T 3fwz_A           72 AKWLILTIP   80 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEECC
Confidence            788888776

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.95  E-value=2.9e-05  Score=60.22  Aligned_cols=83  Identities=16%  Similarity=0.281  Sum_probs=57.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC-------------------cchhhHHHHhhccCCCCCCceE
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKD-------------------DLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+...+.+....+ ..++..
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~  105 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAITP  105 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEEE
Confidence            367789999996 6999999999999997 688888876                   566666666654322 123455


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      +..++++ +.+.++++       ..|++|.+..
T Consensus       106 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             ECSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             EeccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            5555653 34444433       6799998865

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.95  E-value=2e-05  Score=64.47  Aligned_cols=78  Identities=21%  Similarity=0.355  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|+++||+||+||||..+++.+...|++|+++++++++.+...+ +    +    .. ...|..+.+ +.+.+.+..  .
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~----G----a~-~~~~~~~~~-~~~~~~~~~--~  229 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L----G----CD-RPINYKTEP-VGTVLKQEY--P  229 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T----T----CS-EEEETTTSC-HHHHHHHHC--T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c----C----Cc-EEEecCChh-HHHHHHHhc--C
Confidence            58999999999999999999999999999999998766544432 2    1    11 123555433 222222221  1


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                      +++|++|+++|
T Consensus       230 ~g~D~vid~~g  240 (362)
T 2c0c_A          230 EGVDVVYESVG  240 (362)
T ss_dssp             TCEEEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            47999999998

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.94  E-value=2.3e-05  Score=63.59  Aligned_cols=77  Identities=23%  Similarity=0.418  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+||+|+||..+++.+...|++|+++ +++++.+.. +++.        ...  .| .+.+ +.+.+.+... 
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lG--------a~~--i~-~~~~-~~~~~~~~~~-  213 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLG--------ATP--ID-ASRE-PEDYAAEHTA-  213 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHT--------SEE--EE-TTSC-HHHHHHHHHT-
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcC--------CCE--ec-cCCC-HHHHHHHHhc-
Confidence            368999999999999999999999999999988 666554433 2221        222  45 3333 2222222211 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..++|++|.++|
T Consensus       214 ~~g~D~vid~~g  225 (343)
T 3gaz_A          214 GQGFDLVYDTLG  225 (343)
T ss_dssp             TSCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            137999999998

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.89  E-value=4.6e-05  Score=61.85  Aligned_cols=77  Identities=21%  Similarity=0.310  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|+++||+||+|+||...++.+...|++|+++++++++.+...+ +.   .   . .  ..|..+  ++   .+++.+..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG---a---~-~--vi~~~~--~~---~~~~~~~~  214 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG---A---D-I--VLNHKE--SL---LNQFKTQG  214 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT---C---S-E--EECTTS--CH---HHHHHHHT
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC---C---c-E--EEECCc--cH---HHHHHHhC
Confidence            68999999999999999999999999999999998776554443 21   1   1 1  133332  22   22333333


Q ss_pred             -CCccEEEeCCcc
Q 044923           92 -GKLDIMFNNAGI  103 (214)
Q Consensus        92 -g~id~li~~ag~  103 (214)
                       +.+|++|+++|.
T Consensus       215 ~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          215 IELVDYVFCTFNT  227 (346)
T ss_dssp             CCCEEEEEESSCH
T ss_pred             CCCccEEEECCCc
Confidence             479999999884

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.87  E-value=0.00024  Score=57.87  Aligned_cols=81  Identities=20%  Similarity=0.256  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|+++||+|+ |++|...++.+...|++ |+++++++++.+...+ +..      .+..+..|-.+.+++.+   ++++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l~~------~~~~~~~~~~~~~~~~~---~v~~~  247 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-ICP------EVVTHKVERLSAEESAK---KIVES  247 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-HCT------TCEEEECCSCCHHHHHH---HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hch------hcccccccccchHHHHH---HHHHH
Confidence            5889999998 99999999988889998 8888888776655443 211      23334445444554433   34443


Q ss_pred             c--CCccEEEeCCcc
Q 044923           91 Y--GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~--g~id~li~~ag~  103 (214)
                      .  .++|++|.++|.
T Consensus       248 t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          248 FGGIEPAVALECTGV  262 (363)
T ss_dssp             TSSCCCSEEEECSCC
T ss_pred             hCCCCCCEEEECCCC
Confidence            3  369999999983

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.84  E-value=4.1e-05  Score=57.97  Aligned_cols=73  Identities=19%  Similarity=0.267  Sum_probs=54.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++|+|+ |.+|..+++.|.++|++|+++.++++..+.+.+..        .+.++.+|.++++.+.++      ...+.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~--------~~~~i~gd~~~~~~l~~a------~i~~a   66 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL--------KATIIHGDGSHKEILRDA------EVSKN   66 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS--------SSEEEESCTTSHHHHHHH------TCCTT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc--------CCeEEEcCCCCHHHHHhc------CcccC
Confidence            4889996 89999999999999999999999887665544321        356788899888766543      12367


Q ss_pred             cEEEeCCc
Q 044923           95 DIMFNNAG  102 (214)
Q Consensus        95 d~li~~ag  102 (214)
                      |++|.+.+
T Consensus        67 d~vi~~~~   74 (218)
T 3l4b_C           67 DVVVILTP   74 (218)
T ss_dssp             CEEEECCS
T ss_pred             CEEEEecC
Confidence            78776654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.84  E-value=1.1e-05  Score=57.08  Aligned_cols=72  Identities=21%  Similarity=0.290  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+++++|.|+ |++|+.+++.|.+.|++|.+.+|+.++.+.+.+.+.        +..  .+..+   +.+.++      
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--------~~~--~~~~~---~~~~~~------   79 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--------YEY--VLIND---IDSLIK------   79 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--------CEE--EECSC---HHHHHH------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--------Cce--EeecC---HHHHhc------
Confidence            3899999996 999999999999999998899999887766655542        111  12333   223333      


Q ss_pred             CCccEEEeCCccc
Q 044923           92 GKLDIMFNNAGIV  104 (214)
Q Consensus        92 g~id~li~~ag~~  104 (214)
                       ..|++|++.+..
T Consensus        80 -~~Divi~at~~~   91 (144)
T 3oj0_A           80 -NNDVIITATSSK   91 (144)
T ss_dssp             -TCSEEEECSCCS
T ss_pred             -CCCEEEEeCCCC
Confidence             689999998854

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.83  E-value=7.9e-05  Score=60.45  Aligned_cols=102  Identities=20%  Similarity=0.300  Sum_probs=67.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|++++|+|+ |+||..+++.+...|+ +|+++.+++++.+... ++.        .. ...|..+.+ +   .+++.+.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G--------a~-~~~~~~~~~-~---~~~v~~~  231 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG--------AD-YVINPFEED-V---VKEVMDI  231 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT--------CS-EEECTTTSC-H---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC--------CC-EEECCCCcC-H---HHHHHHH
Confidence            7899999999 9999999999999999 8999998876654433 221        11 123554433 2   2233332


Q ss_pred             c--CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           91 Y--GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        91 ~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      .  ..+|++|.++|..                           ...+..++.+++  .|+++.+++...
T Consensus       232 ~~g~g~D~vid~~g~~---------------------------~~~~~~~~~l~~--~G~iv~~g~~~~  271 (348)
T 2d8a_A          232 TDGNGVDVFLEFSGAP---------------------------KALEQGLQAVTP--AGRVSLLGLYPG  271 (348)
T ss_dssp             TTTSCEEEEEECSCCH---------------------------HHHHHHHHHEEE--EEEEEECCCCSS
T ss_pred             cCCCCCCEEEECCCCH---------------------------HHHHHHHHHHhc--CCEEEEEccCCC
Confidence            2  2699999999831                           123455666655  478998887544

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.82  E-value=6.6e-05  Score=61.44  Aligned_cols=75  Identities=19%  Similarity=0.295  Sum_probs=54.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|++++|+|+ |+||..+++.+...|++|+++.+++++.+...+++.   .   .   ...|..+.+.+.+       ..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG---a---~---~v~~~~~~~~~~~-------~~  249 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG---A---D---SFLVSRDQEQMQA-------AA  249 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC---C---S---EEEETTCHHHHHH-------TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC---C---c---eEEeccCHHHHHH-------hh
Confidence            6899999996 999999999999999999999988876654443321   1   1   1246666543322       23


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +.+|++|+++|.
T Consensus       250 ~~~D~vid~~g~  261 (366)
T 1yqd_A          250 GTLDGIIDTVSA  261 (366)
T ss_dssp             TCEEEEEECCSS
T ss_pred             CCCCEEEECCCc
Confidence            579999999985

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.79  E-value=1.3e-05  Score=63.13  Aligned_cols=44  Identities=16%  Similarity=0.098  Sum_probs=38.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVC   54 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~   54 (214)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+..|+.++.+++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            578999999997 7999999999999998 7999999987665544

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.78  E-value=0.00033  Score=56.84  Aligned_cols=81  Identities=17%  Similarity=0.157  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHHH-
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAVS-   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~-   89 (214)
                      .|+++||+|+ |++|...++.+...|++|+++++++++.+... ++.   .   .   ...|.++ .+..+++.+...+ 
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lG---a---~---~~~~~~~~~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCG---A---D---VTLVVDPAKEEESSIIERIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTT---C---S---EEEECCTTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhC---C---C---EEEcCcccccHHHHHHHHhccc
Confidence            5899999997 89999999988889999988888876654432 221   1   1   1235543 2222222221110 


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                      ..+++|++|+++|.
T Consensus       237 ~g~g~D~vid~~g~  250 (352)
T 1e3j_A          237 IGDLPNVTIDCSGN  250 (352)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence            02369999999983

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.74  E-value=0.00013  Score=59.82  Aligned_cols=77  Identities=25%  Similarity=0.305  Sum_probs=51.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+|+||..+++.+...|++|+.+.+ +++.+.. +++.   .   .   ...|..+.+..+    ++.+ 
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~lG---a---~---~v~~~~~~~~~~----~~~~-  245 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKLG---A---D---DVIDYKSGSVEE----QLKS-  245 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHTT---C---S---EEEETTSSCHHH----HHHT-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHcC---C---C---EEEECCchHHHH----HHhh-
Confidence            46899999999999999999999899999988874 4443332 2221   1   1   123555543222    2222 


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++|.++|.
T Consensus       246 ~~g~D~vid~~g~  258 (375)
T 2vn8_A          246 LKPFDFILDNVGG  258 (375)
T ss_dssp             SCCBSEEEESSCT
T ss_pred             cCCCCEEEECCCC
Confidence            3579999999985

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.72  E-value=0.00012  Score=60.76  Aligned_cols=73  Identities=18%  Similarity=0.387  Sum_probs=53.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++|++++|.|+ |++|+.+++.|...|+ +|++..|+.++.+++.+.+.        ...  .+.   +++.+.+.   
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--------~~~--~~~---~~l~~~l~---  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------GEA--VRF---DELVDHLA---  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------CEE--CCG---GGHHHHHH---
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--------Cce--ecH---HhHHHHhc---
Confidence            368999999998 9999999999999998 89999998876655555442        111  122   23333332   


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                          ..|++|++.|.
T Consensus       227 ----~aDvVi~at~~  237 (404)
T 1gpj_A          227 ----RSDVVVSATAA  237 (404)
T ss_dssp             ----TCSEEEECCSS
T ss_pred             ----CCCEEEEccCC
Confidence                68999999874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.71  E-value=5e-05  Score=59.67  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=56.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+..|+.++.+++.+++..  .   .+...  +..+.+         
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~---~~~~~--~~~~l~---------  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--S---RLRIS--RYEALE---------  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--T---TEEEE--CSGGGT---------
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--C---CeeEe--eHHHhc---------
Confidence            3578999999998 6999999999999996 899999999888888777653  1   22222  222211         


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                       +  ...|++||+.+..
T Consensus       179 -~--~~~DivInaTp~g  192 (272)
T 3pwz_A          179 -G--QSFDIVVNATSAS  192 (272)
T ss_dssp             -T--CCCSEEEECSSGG
T ss_pred             -c--cCCCEEEECCCCC
Confidence             0  3789999997654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.70  E-value=5.5e-05  Score=59.72  Aligned_cols=76  Identities=12%  Similarity=0.218  Sum_probs=57.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+..|+.++.+++.+.+....    .+...  +..+   +.      
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~----~~~~~--~~~~---l~------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG----EVKAQ--AFEQ---LK------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS----CEEEE--EGGG---CC------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC----CeeEe--eHHH---hc------
Confidence            3578999999998 6999999999999996 89999999988888887775431    22222  2221   10      


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                          ...|++||+.+..
T Consensus       186 ----~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 ----QSYDVIINSTSAS  198 (281)
T ss_dssp             ----SCEEEEEECSCCC
T ss_pred             ----CCCCEEEEcCcCC
Confidence                3789999988754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.61  E-value=0.00025  Score=55.50  Aligned_cols=41  Identities=22%  Similarity=0.169  Sum_probs=38.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      +|+++|+|+ ||.|++++..|++.|.+|.+..|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            899999997 89999999999999988999999998887776

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.61  E-value=0.00038  Score=56.04  Aligned_cols=149  Identities=14%  Similarity=0.143  Sum_probs=79.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +..++++.|+|+ |++|.+++..|+..|.  .+++.++++++++....++.+.......+.+...   +.+         
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~---------   72 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS---------   72 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH---------
Confidence            445678999996 9999999999999987  7999999887777666666543211112222222   211         


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCccc-------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVI-------  159 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~-------  159 (214)
                        .+.+.|++|..||.....     ..+   =...++.|.-    ..+.+.+.+.+. ..+.++++|......       
T Consensus        73 --a~~~aDiVvi~ag~~~kp-----G~t---R~dL~~~N~~----I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~k~  138 (326)
T 3vku_A           73 --DAKDADLVVITAGAPQKP-----GET---RLDLVNKNLK----ILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKL  138 (326)
T ss_dssp             --GGTTCSEEEECCCCC----------------------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHHHHH
T ss_pred             --HhcCCCEEEECCCCCCCC-----Cch---HHHHHHHHHH----HHHHHHHHHHhcCCceEEEEccCchHHHHHHHHHh
Confidence              233789999999974211     112   2345666763    334444444433 356677776643321       


Q ss_pred             -CCCCCccchh-hHHHHHHHHHHHHHHH
Q 044923          160 -GGVTSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 -~~~~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                       +.|.....+. +-.-...+...++..+
T Consensus       139 ~g~p~~rviG~gt~LD~~R~~~~la~~l  166 (326)
T 3vku_A          139 SGFPKNRVVGSGTSLDTARFRQSIAKMV  166 (326)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHeeeecccCcHHHHHHHHHHHh
Confidence             2233333343 3333345556666655

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.61  E-value=0.00037  Score=56.51  Aligned_cols=149  Identities=17%  Similarity=0.140  Sum_probs=83.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +.++++.|+|++|.+|..+|..++..|.  .|++.+.++++++....++........++.+ .   +|   ..+.++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC---
Confidence            4567899999999999999999999984  6999999887776655555543211112211 1   12   222222   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCe-EEEecCCCccc-------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGS-IISTASVCGVI-------  159 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~-iv~~sS~~~~~-------  159 (214)
                          +.|++|.+||....     ...+.   ...++.|+.    ..+.+.+.+.+. ..+. ++++|...-..       
T Consensus        76 ----dADvVvitaG~p~k-----pG~~R---~dLl~~N~~----I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~  139 (343)
T 3fi9_A           76 ----DAKYIVSSGGAPRK-----EGMTR---EDLLKGNAE----IAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIY  139 (343)
T ss_dssp             ----TEEEEEECCC------------CH---HHHHHHHHH----HHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHH
T ss_pred             ----CCCEEEEccCCCCC-----CCCCH---HHHHHHHHH----HHHHHHHHHHHhccCcEEEEEecCchHHHHHHHHHH
Confidence                78999999997421     12233   445667764    344444444443 2453 56666543221       


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 -GGVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 -~~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                       +.|.....+.+..--..|-..++.++
T Consensus       140 sg~p~~rv~g~t~LDs~R~~~~la~~l  166 (343)
T 3fi9_A          140 SGLKPSQVTTLAGLDSTRLQSELAKHF  166 (343)
T ss_dssp             HTCCGGGEEEECCHHHHHHHHHHHHHH
T ss_pred             cCCCcceEEEecCcHHHHHHHHHHHHh
Confidence             22322223333333344666666665

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.60  E-value=0.00013  Score=59.08  Aligned_cols=77  Identities=23%  Similarity=0.296  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|+++||+|+ |++|..+++.+...|+ +|+.+.+++++.+...+ + .      .   ...|..+.+ +.+.+.++.  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a------~---~v~~~~~~~-~~~~~~~~~--  228 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A------D---RLVNPLEED-LLEVVRRVT--  228 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C------S---EEECTTTSC-HHHHHHHHH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H------H---hccCcCccC-HHHHHHHhc--
Confidence            7899999999 9999999998888999 89999988765543322 1 1      1   123554432 333333332  


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++|.++|.
T Consensus       229 ~~g~D~vid~~g~  241 (343)
T 2dq4_A          229 GSGVEVLLEFSGN  241 (343)
T ss_dssp             SSCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999983

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.59  E-value=0.00012  Score=58.92  Aligned_cols=77  Identities=14%  Similarity=0.182  Sum_probs=50.0

Q ss_pred             Cc-EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GK-VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k-~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |+ +++|+||+||+|...++.+...|++|+++.+++++.+...+ +.   .   . .  ..|..+.+  .+.++++  ..
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lG---a---~-~--~i~~~~~~--~~~~~~~--~~  214 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LG---A---K-E--VLAREDVM--AERIRPL--DK  214 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TT---C---S-E--EEECC-----------C--CS
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cC---C---c-E--EEecCCcH--HHHHHHh--cC
Confidence            44 79999999999999999998899999999998777655432 21   1   1 1  23554432  1222222  12


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +++|++|.++|.
T Consensus       215 ~~~d~vid~~g~  226 (328)
T 1xa0_A          215 QRWAAAVDPVGG  226 (328)
T ss_dssp             CCEEEEEECSTT
T ss_pred             CcccEEEECCcH
Confidence            479999999983

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.59  E-value=0.00081  Score=52.93  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=35.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      +++.|.|+ |-+|.++|+.|++.|++|++.+++++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777775 7799999999999999999999998877666554

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.56  E-value=0.00046  Score=54.62  Aligned_cols=92  Identities=12%  Similarity=0.235  Sum_probs=62.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC------------------cchhhHHHHhhccCCCCCCceE
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKD------------------DLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~------------------~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      ..+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                  .+.+...+.+....+ ..++..
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP-~v~v~~  109 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP-DVLFEV  109 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT-TSEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC-CcEEEE
Confidence            3578899999986 7999999999999996 488887654                  445555555554433 235666


Q ss_pred             EEeeCCCHHHHHHHHHHHHHH----cCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQ----YGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~----~g~id~li~~ag  102 (214)
                      +..++++.+.++++++.+...    ....|+||.+..
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            677787767777666544321    136788886654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.49  E-value=0.002  Score=51.85  Aligned_cols=147  Identities=12%  Similarity=0.072  Sum_probs=84.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+++.|+|+ |.+|.+++..|+..|.  .|++.++++++++....++.+..+.. ..+.+...|   .+           
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~-----------   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE-----------   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH-----------
Confidence            467899996 9999999999999986  79999998877776655565432110 123333222   11           


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------CC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------GG  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~~  161 (214)
                      .+.+.|++|..+|....     ...+.   ...++.|..-.-.+.+.+..+   ...+.++++|......        +.
T Consensus        70 a~~~aDvVvi~ag~p~k-----pG~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd~~t~~~~k~~g~  138 (326)
T 3pqe_A           70 DCKDADIVCICAGANQK-----PGETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVDILTYATWKFSGL  138 (326)
T ss_dssp             GGTTCSEEEECCSCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHHHHHHHHHHHHCC
T ss_pred             HhCCCCEEEEecccCCC-----CCccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHHHHHHHHHHhcCC
Confidence            22378999999997421     12333   334666664333333333332   2356677777644332        23


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHH
Q 044923          162 VTSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       162 ~~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      |.....+. +-.--..+...++..+
T Consensus       139 p~~rviG~gt~LD~~R~~~~la~~l  163 (326)
T 3pqe_A          139 PKERVIGSGTTLDSARFRFMLSEYF  163 (326)
T ss_dssp             CGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CHHHEEeeccccHHHHHHHHHHHHh
Confidence            33333443 3333344556666655

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.49  E-value=0.0014  Score=52.49  Aligned_cols=146  Identities=13%  Similarity=0.113  Sum_probs=83.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+||+|.+|..++..|++.|  ..|++.++++  .+....++.+.... .++....    ...+.++.++       
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~-~~l~~~~----~t~d~~~a~~-------   67 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETR-ATVKGYL----GPEQLPDCLK-------   67 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSS-CEEEEEE----SGGGHHHHHT-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcC-ceEEEec----CCCCHHHHhC-------
Confidence            58999999999999999999988  5799999876  33333444432210 0111110    0122333333       


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc------------C
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI------------G  160 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~  160 (214)
                      +.|++|+.+|.....     ..+..   ..+..|+.....+.+.+.++.   ..+.+|++|......            .
T Consensus        68 ~aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~~---p~a~viv~sNPv~~~~~i~~~~~~~~~~  136 (314)
T 1mld_A           68 GCDVVVIPAGVPRKP-----GMTRD---DLFNTNATIVATLTAACAQHC---PDAMICIISNPVNSTIPITAEVFKKHGV  136 (314)
T ss_dssp             TCSEEEECCSCCCCT-----TCCGG---GGHHHHHHHHHHHHHHHHHHC---TTSEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEECCCcCCCC-----CCcHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEECCCcchhHHHHHHHHHHcCC
Confidence            789999999975321     12222   235666654444444444432   356788877655432            2


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHH
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                      .|.....+.+-.--..+...++..+
T Consensus       137 ~p~~rvig~t~Ld~~r~~~~la~~l  161 (314)
T 1mld_A          137 YNPNKIFGVTTLDIVRANAFVAELK  161 (314)
T ss_dssp             CCTTSEEECCHHHHHHHHHHHHHHT
T ss_pred             CCcceEEEeecccHHHHHHHHHHHh
Confidence            3444455553333445556666554

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.46  E-value=0.00031  Score=57.32  Aligned_cols=79  Identities=15%  Similarity=0.232  Sum_probs=53.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+| +|+||...++.+...|++|+++.+++++.+... ++..      .   ...| .+.+++.+.+.++.. 
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa------~---~vi~-~~~~~~~~~v~~~~~-  254 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGA------D---HGIN-RLEEDWVERVYALTG-  254 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTC------S---EEEE-TTTSCHHHHHHHHHT-
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCC------C---EEEc-CCcccHHHHHHHHhC-
Confidence            3689999999 899999999999899999999998877665532 2211      1   1235 433333333332221 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..++|++|.++|
T Consensus       255 g~g~D~vid~~g  266 (363)
T 3uog_A          255 DRGADHILEIAG  266 (363)
T ss_dssp             TCCEEEEEEETT
T ss_pred             CCCceEEEECCC
Confidence            126999999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.46  E-value=0.0004  Score=56.58  Aligned_cols=38  Identities=13%  Similarity=0.152  Sum_probs=33.3

Q ss_pred             CC-cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           12 QG-KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        12 ~~-k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      .| +++||+||+|++|...++.+...|++++++.++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            57 999999999999999998888889999888876655

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.45  E-value=0.00011  Score=55.28  Aligned_cols=42  Identities=17%  Similarity=0.419  Sum_probs=35.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      +++|+||+|.+|.++++.|++.|++|.+..|+++..+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999999999999999999999999987766555443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.0004  Score=56.82  Aligned_cols=80  Identities=18%  Similarity=0.264  Sum_probs=53.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+.+++++.+... ++.        .. ...|.++ .+++.+.+.++.
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lG--------a~-~vi~~~~~~~~~~~~~~~~~  259 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFG--------AT-DFVNPNDHSEPISQVLSKMT  259 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--------CC-EEECGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhC--------Cc-eEEeccccchhHHHHHHHHh
Confidence            36899999996 9999999998888999 7999888887665443 221        11 1234443 123333333332


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       260 ~--~g~D~vid~~g~  272 (374)
T 1cdo_A          260 N--GGVDFSLECVGN  272 (374)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  479999999984

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.44  E-value=0.00046  Score=55.69  Aligned_cols=77  Identities=18%  Similarity=0.204  Sum_probs=54.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+|+ |++|...++.+...|++|+.+++++++.+...+ +.   .   .   ...|..+.+..+.    +.+.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG---a---~---~~i~~~~~~~~~~----~~~~  229 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-LG---A---E---VAVNARDTDPAAW----LQKE  229 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT---C---S---EEEETTTSCHHHH----HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cC---C---C---EEEeCCCcCHHHH----HHHh
Confidence            46899999997 899999999888899999999998776654322 21   1   1   1245555443332    3334


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      .+++|++|.++|
T Consensus       230 ~g~~d~vid~~g  241 (340)
T 3s2e_A          230 IGGAHGVLVTAV  241 (340)
T ss_dssp             HSSEEEEEESSC
T ss_pred             CCCCCEEEEeCC
Confidence            468999999987

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.42  E-value=0.0003  Score=57.31  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~   90 (214)
                      .|+++||+|+ |++|...++.+...|++|+.+.+++++.+...+ +..      . .+  .|..+. +..    +++.  
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa------~-~v--~~~~~~~~~~----~~~~--  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGA------D-HY--IATLEEGDWG----EKYF--  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC------S-EE--EEGGGTSCHH----HHSC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC------C-EE--EcCcCchHHH----HHhh--
Confidence            5899999999 999999999888889999999998877655433 211      1 11  344433 222    2222  


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                       +++|++|.++|.
T Consensus       242 -~~~D~vid~~g~  253 (360)
T 1piw_A          242 -DTFDLIVVCASS  253 (360)
T ss_dssp             -SCEEEEEECCSC
T ss_pred             -cCCCEEEECCCC
Confidence             589999999985

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.42  E-value=0.00017  Score=55.10  Aligned_cols=72  Identities=18%  Similarity=0.206  Sum_probs=50.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .+.++|.|+ |.+|..+++.|.++|+ |+++.++++..+...     .     .+.++.+|.+|++.+.++      ...
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~-----~~~~i~gd~~~~~~l~~a------~i~   70 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S-----GANFVHGDPTRVSDLEKA------NVR   70 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T-----TCEEEESCTTCHHHHHHT------TCT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c-----CCeEEEcCCCCHHHHHhc------Ccc
Confidence            467889997 8999999999999999 999988876554332     1     356777888877655443      112


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      +.|.+|.+.+
T Consensus        71 ~ad~vi~~~~   80 (234)
T 2aef_A           71 GARAVIVDLE   80 (234)
T ss_dssp             TCSEEEECCS
T ss_pred             hhcEEEEcCC
Confidence            4566665543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.41  E-value=0.0003  Score=57.29  Aligned_cols=75  Identities=15%  Similarity=0.239  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|++++|+|+ |+||...++.+...|++|+++.+++++.+...+++.   .   . .  ..|..+.+.+.       +..
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lG---a---~-~--vi~~~~~~~~~-------~~~  242 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLG---A---D-D--YVIGSDQAKMS-------ELA  242 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSC---C---S-C--EEETTCHHHHH-------HST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcC---C---c-e--eeccccHHHHH-------Hhc
Confidence            6899999995 999999999888889999999988766544432221   1   1 1  13555543322       222


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +++|++|.++|.
T Consensus       243 ~g~D~vid~~g~  254 (357)
T 2cf5_A          243 DSLDYVIDTVPV  254 (357)
T ss_dssp             TTEEEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.39  E-value=0.00067  Score=55.48  Aligned_cols=74  Identities=16%  Similarity=0.287  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|.++||+|+ |++|...++.+...|++|+++.+++++.+...+ +..      .   ...|..+.+.+++    +.   
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa------~---~vi~~~~~~~~~~----~~---  255 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGA------D---EVVNSRNADEMAA----HL---  255 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC------S---EEEETTCHHHHHT----TT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC------c---EEeccccHHHHHH----hh---
Confidence            5899999998 899999999888899999999988877655433 211      1   1246666543322    21   


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +++|++|.++|.
T Consensus       256 ~g~Dvvid~~g~  267 (369)
T 1uuf_A          256 KSFDFILNTVAA  267 (369)
T ss_dssp             TCEEEEEECCSS
T ss_pred             cCCCEEEECCCC
Confidence            579999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.37  E-value=0.00046  Score=56.45  Aligned_cols=80  Identities=20%  Similarity=0.302  Sum_probs=52.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|+++||+|+ |+||...++.+...|+ +|+.+++++++.+... ++.        .. ...|.++ .+++.+.+.++.
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lG--------a~-~vi~~~~~~~~~~~~~~~~~  258 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVG--------AT-ECVNPQDYKKPIQEVLTEMS  258 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--------CS-EEECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC--------Cc-eEecccccchhHHHHHHHHh
Confidence            36899999995 9999999998888999 7989888887665443 221        11 1234433 122333333322


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       259 ~--~g~D~vid~~g~  271 (374)
T 2jhf_A          259 N--GGVDFSFEVIGR  271 (374)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCcEEEECCCC
Confidence            2  479999999984

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.00055  Score=55.74  Aligned_cols=78  Identities=19%  Similarity=0.288  Sum_probs=53.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|+++||+|+ |++|...++.+... |++|+.+++++++.+... ++.   .   .   ...|..+.  +.+.+.++. 
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lG---a---~---~vi~~~~~--~~~~v~~~~-  250 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLG---A---D---HVVDARRD--PVKQVMELT-  250 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTT---C---S---EEEETTSC--HHHHHHHHT-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhC---C---C---EEEeccch--HHHHHHHHh-
Confidence            36899999999 89999999988888 999999998876654443 221   1   1   12455543  333333221 


Q ss_pred             HcC-CccEEEeCCcc
Q 044923           90 QYG-KLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g-~id~li~~ag~  103 (214)
                       .+ ++|++|.++|.
T Consensus       251 -~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          251 -RGRGVNVAMDFVGS  264 (359)
T ss_dssp             -TTCCEEEEEESSCC
T ss_pred             -CCCCCcEEEECCCC
Confidence             13 69999999984

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.36  E-value=0.0005  Score=53.25  Aligned_cols=83  Identities=19%  Similarity=0.303  Sum_probs=51.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC-------------------cchhhHHHHhhccCCCCCCceE
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKD-------------------DLGESVCEDISSSSSSANGCSY   69 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~   69 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++.                   .+.+.+.+.+....+ ..++..
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~  102 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-DIQLTA  102 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-CCEEEE
Confidence            467899999998 67999999999999974 77775432                   344444455544322 223444


Q ss_pred             EEeeCCCHHHHHHHHHHHHHHcCCccEEEeCCc
Q 044923           70 VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        70 ~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag  102 (214)
                      +..+++ .+.+.++++       ..|+||++..
T Consensus       103 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            444443 234444443       4688877654

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.35  E-value=0.0014  Score=53.31  Aligned_cols=78  Identities=19%  Similarity=0.319  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC--CHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT--KEKDIENAVNTAV   88 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~   88 (214)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+... ++.   .   . .  ..|..  +.++..   +++.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG---a---~-~--vi~~~~~~~~~~~---~~i~  236 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIG---A---D-L--VLQISKESPQEIA---RKVE  236 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTT---C---S-E--EEECSSCCHHHHH---HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---C---C-E--EEcCcccccchHH---HHHH
Confidence            5889999996 8999999998888899 7999988876554432 221   1   1 1  23444  223332   2333


Q ss_pred             HHc-CCccEEEeCCcc
Q 044923           89 SQY-GKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~-g~id~li~~ag~  103 (214)
                      +.. +++|++|.++|.
T Consensus       237 ~~~~~g~D~vid~~g~  252 (356)
T 1pl8_A          237 GQLGCKPEVTIECTGA  252 (356)
T ss_dssp             HHHTSCCSEEEECSCC
T ss_pred             HHhCCCCCEEEECCCC
Confidence            322 479999999983

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.35  E-value=0.00019  Score=55.67  Aligned_cols=43  Identities=7%  Similarity=0.219  Sum_probs=36.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVC   54 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~   54 (214)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.+..|+.++.+++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            3577 8999987 8999999999999998 7999999877655443

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.34  E-value=0.0015  Score=53.37  Aligned_cols=78  Identities=9%  Similarity=0.036  Sum_probs=52.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+|++|...++.+...|++|+.+. ++++.+ ..+++.   .   .   ...|..+.+-.    +++++.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lG---a---~---~vi~~~~~~~~----~~v~~~  227 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRG---A---E---EVFDYRAPNLA----QTIRTY  227 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTT---C---S---EEEETTSTTHH----HHHHHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcC---C---c---EEEECCCchHH----HHHHHH
Confidence            5789999999999999999999989999988876 444443 223221   1   1   12455554322    333333


Q ss_pred             c-CCccEEEeCCcc
Q 044923           91 Y-GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~-g~id~li~~ag~  103 (214)
                      . +++|++|.++|.
T Consensus       228 t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          228 TKNNLRYALDCITN  241 (371)
T ss_dssp             TTTCCCEEEESSCS
T ss_pred             ccCCccEEEECCCc
Confidence            2 469999999994

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.33  E-value=0.0004  Score=56.70  Aligned_cols=77  Identities=19%  Similarity=0.313  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHH-cCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSK-HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|+++||+||+|++|...++.+.. .|++|+.+++++++.+...+ +.   .   . .  ..|..+  ++   .+++.+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lG---a---d-~--vi~~~~--~~---~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LG---A---H-H--VIDHSK--PL---AAEVAAL  235 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TT---C---S-E--EECTTS--CH---HHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cC---C---C-E--EEeCCC--CH---HHHHHHh
Confidence            689999999999999988876665 58999999998766554432 21   1   1 1  134433  22   2333332


Q ss_pred             -cCCccEEEeCCcc
Q 044923           91 -YGKLDIMFNNAGI  103 (214)
Q Consensus        91 -~g~id~li~~ag~  103 (214)
                       .+++|++|.++|.
T Consensus       236 ~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          236 GLGAPAFVFSTTHT  249 (363)
T ss_dssp             CSCCEEEEEECSCH
T ss_pred             cCCCceEEEECCCc
Confidence             2479999999883

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.33  E-value=0.00068  Score=55.47  Aligned_cols=80  Identities=18%  Similarity=0.282  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|+++||+|+ |+||...++.+...|+ +|+.+++++++.+... ++.        .. ...|.++ .+++.+.+.++.
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG--------a~-~vi~~~~~~~~~~~~v~~~~  262 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALG--------AT-DCLNPRELDKPVQDVITELT  262 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT--------CS-EEECGGGCSSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC--------Cc-EEEccccccchHHHHHHHHh
Confidence            35899999996 8999999998888899 7999888877665443 221        11 1134432 122333333332


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       263 ~--~g~Dvvid~~G~  275 (376)
T 1e3i_A          263 A--GGVDYSLDCAGT  275 (376)
T ss_dssp             T--SCBSEEEESSCC
T ss_pred             C--CCccEEEECCCC
Confidence            2  479999999984

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.32  E-value=0.00051  Score=55.86  Aligned_cols=75  Identities=23%  Similarity=0.455  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCChHHHHH-HHHH-HHcCCe-EEEEecCCc---chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECA-ARLF-SKHGAK-VLIADIKDD---LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~i-a~~L-~~~g~~-vi~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++++++|+|+ |++|... ++.+ ...|++ |+.+.++++   +.+... ++        ....+  |..+.+ +.+ +.
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l--------Ga~~v--~~~~~~-~~~-i~  237 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL--------DATYV--DSRQTP-VED-VP  237 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT--------TCEEE--ETTTSC-GGG-HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc--------CCccc--CCCccC-HHH-HH
Confidence            3489999999 9999999 7766 567998 999998876   554432 22        12223  555433 222 33


Q ss_pred             HHHHHcCCccEEEeCCcc
Q 044923           86 TAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~  103 (214)
                      ++   .+++|++|.++|.
T Consensus       238 ~~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV---YEQMDFIYEATGF  252 (357)
T ss_dssp             HH---SCCEEEEEECSCC
T ss_pred             Hh---CCCCCEEEECCCC
Confidence            33   2479999999983

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.32  E-value=0.00054  Score=56.02  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=52.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++.+... ++..      . .  ..|.++ .+++.+.+.++.
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa------~-~--vi~~~~~~~~~~~~v~~~~  257 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGA------T-E--CINPQDFSKPIQEVLIEMT  257 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTC------S-E--EECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCC------c-e--EeccccccccHHHHHHHHh
Confidence            36899999996 8999999998888899 7989888887765443 2211      1 1  134433 122333333322


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                      .  +.+|++|.++|.
T Consensus       258 ~--~g~D~vid~~g~  270 (373)
T 2fzw_A          258 D--GGVDYSFECIGN  270 (373)
T ss_dssp             T--SCBSEEEECSCC
T ss_pred             C--CCCCEEEECCCc
Confidence            2  479999999984

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=0.00094  Score=54.81  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=53.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC--CHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT--KEKDIENAVNTA   87 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~~~~~~~~~   87 (214)
                      -.|+++||+| +|++|...++.+...| ++|+++.+++++.+... ++.   .   . .+  .|..  +.+++   .+++
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lG---a---~-~v--i~~~~~~~~~~---~~~v  259 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIG---A---D-LT--LNRRETSVEER---RKAI  259 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTT---C---S-EE--EETTTSCHHHH---HHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcC---C---c-EE--EeccccCcchH---HHHH
Confidence            3589999999 8999999999888899 59999998876654443 221   1   1 12  3443  13333   3334


Q ss_pred             HHHc-C-CccEEEeCCcc
Q 044923           88 VSQY-G-KLDIMFNNAGI  103 (214)
Q Consensus        88 ~~~~-g-~id~li~~ag~  103 (214)
                      .+.. + ++|++|.++|.
T Consensus       260 ~~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          260 MDITHGRGADFILEATGD  277 (380)
T ss_dssp             HHHTTTSCEEEEEECSSC
T ss_pred             HHHhCCCCCcEEEECCCC
Confidence            4433 2 69999999984

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.32  E-value=0.00055  Score=54.77  Aligned_cols=84  Identities=17%  Similarity=0.188  Sum_probs=58.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+++|.|++.=+|+.+|+.|+..|++|.++.|+..+..+..+.+...     .........++++++.+.+.    
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~-----~~~~t~~~~t~~~~L~e~l~----  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN-----KHHVEDLGEYSEDLLKKCSL----  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC-----CCEEEEEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh-----cccccccccccHhHHHHHhc----
Confidence            689999999999988999999999999999999988754433322222211     11122222244567776666    


Q ss_pred             HcCCccEEEeCCcccC
Q 044923           90 QYGKLDIMFNNAGIVD  105 (214)
Q Consensus        90 ~~g~id~li~~ag~~~  105 (214)
                         .-|+||...|...
T Consensus       245 ---~ADIVIsAtg~p~  257 (320)
T 1edz_A          245 ---DSDVVITGVPSEN  257 (320)
T ss_dssp             ---HCSEEEECCCCTT
T ss_pred             ---cCCEEEECCCCCc
Confidence               5699999999743

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.31  E-value=0.0002  Score=56.44  Aligned_cols=45  Identities=7%  Similarity=0.263  Sum_probs=38.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCE   55 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~   55 (214)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            578999999997 6999999999999998 79999999877655544

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.29  E-value=0.0028  Score=51.08  Aligned_cols=151  Identities=10%  Similarity=0.082  Sum_probs=86.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ..+.+++.|+|+ |.+|.+++..|+.+|.  .|++.+.++++++....++.+.............  +|.+         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH---------
Confidence            355678999998 9999999999999987  6999999887777766666643210001112211  2222         


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------  159 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------  159 (214)
                        .+.+.|++|..||.....     .++.   .+.++.|.--...+.+.+..+   .+.+.++++|......        
T Consensus        84 --~~~~aDiVvi~aG~~~kp-----G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvdi~t~~~~k~s  150 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQE-----GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVDILTYVAWKIS  150 (331)
T ss_dssp             --GGTTEEEEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHHHHHHHHHHH
T ss_pred             --HhCCCCEEEEccCCCCCC-----CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHHHHHHHHHHHh
Confidence              123789999999975321     2233   345666663333344444333   2346777777644332        


Q ss_pred             CCCCCccchh-hHHHHHHHHHHHHHHH
Q 044923          160 GGVTSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ~~~~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      +.|.....+. +-.-...+...++..+
T Consensus       151 g~p~~rviG~gt~LD~~R~~~~la~~l  177 (331)
T 4aj2_A          151 GFPKNRVIGSGCNLDSARFRYLMGERL  177 (331)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEeeccccHHHHHHHHHHHHh
Confidence            2333333444 2223345555566554

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.28  E-value=0.00066  Score=55.73  Aligned_cols=80  Identities=18%  Similarity=0.283  Sum_probs=53.6

Q ss_pred             CCcEEEEec-CCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITG-GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItG-as~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|.++||.| |+|++|...++.+...|++|+.+.+++++.+...+ +.   .   . .  ..|..+.+-.+++.+ +...
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-lG---a---~-~--~~~~~~~~~~~~v~~-~t~~  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QG---A---V-H--VCNAASPTFMQDLTE-ALVS  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-TT---C---S-C--EEETTSTTHHHHHHH-HHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CC---C---c-E--EEeCCChHHHHHHHH-HhcC
Confidence            578899997 99999999999888889999999988776554432 21   1   1 1  135554433332222 2211


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                       .++|++|.++|.
T Consensus       239 -~g~d~v~d~~g~  250 (379)
T 3iup_A          239 -TGATIAFDATGG  250 (379)
T ss_dssp             -HCCCEEEESCEE
T ss_pred             -CCceEEEECCCc
Confidence             269999999995

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.28  E-value=0.0041  Score=49.76  Aligned_cols=149  Identities=15%  Similarity=0.168  Sum_probs=82.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC--CcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK--DDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~--~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +.+++.|+|+ |.+|.++|..|++.|. .|++.+++  ++..+....++.+.... .....+...  +|.+         
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~---------   74 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYA---------   74 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHH---------
Confidence            5678999997 9999999999999999 89999998  44444443333322100 001111111  1221         


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------  159 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------  159 (214)
                        .+.+.|++|.++|.....     ..+.   .+.++.|..-.-.+.+.+..+   .+.+.++++|......        
T Consensus        75 --a~~~aDvVIiaag~p~kp-----g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPvd~~t~~~~k~s  141 (315)
T 3tl2_A           75 --DTADSDVVVITAGIARKP-----GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPVDAMTYSVFKEA  141 (315)
T ss_dssp             --GGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHHHHHHHHHHHH
T ss_pred             --HhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChHHHHHHHHHHhc
Confidence              234789999999974321     2344   345666764333444444333   2346677777543221        


Q ss_pred             CCCCCccchh-hHHHHHHHHHHHHHHH
Q 044923          160 GGVTSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ~~~~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      +.|.....+. +..--..+...++..+
T Consensus       142 g~p~~rviG~gt~LD~~R~~~~la~~l  168 (315)
T 3tl2_A          142 GFPKERVIGQSGVLDTARFRTFIAQEL  168 (315)
T ss_dssp             CCCGGGEEECCHHHHHHHHHHHHHHHH
T ss_pred             CCChHHEEeeccCcHHHHHHHHHHHHh
Confidence            2233333444 2223344556666655

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.27  E-value=0.0051  Score=49.82  Aligned_cols=119  Identities=13%  Similarity=0.168  Sum_probs=69.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCCc--chhhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-------KVLIADIKDD--LGESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      ++.-+|.|+||+|+||..++..|++...       .+.+.+.++.  .++-..-++....... .......  +|.   .
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~-~~~~~~~--~~~---~   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL-LDKVVVT--ADP---R   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTT-EEEEEEE--SCH---H
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccC-CCcEEEc--CCh---H
Confidence            4556899999999999999999998753       5888877543  2333344444422111 1111111  121   1


Q ss_pred             HHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCCeEEEecC
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA--GRGSIISTAS  154 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~g~iv~~sS  154 (214)
                      +       .+.+.|++|..||....     ..++.+|   .++.|.    ...+.+.+.+.+.  +...++.+|.
T Consensus        96 ~-------a~~~advVvi~aG~prk-----pGmtR~D---Ll~~Na----~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           96 V-------AFDGVAIAIMCGAFPRK-----AGMERKD---LLEMNA----RIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             H-------HTTTCSEEEECCCCCCC-----TTCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             H-------HhCCCCEEEECCCCCCC-----CCCCHHH---HHHHhH----HHHHHHHHHHHhhccCceEEEEeCC
Confidence            2       23488999999998532     2345544   467776    5556666666553  2334555554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.26  E-value=0.00013  Score=58.94  Aligned_cols=117  Identities=16%  Similarity=0.190  Sum_probs=69.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--e-----EEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--K-----VLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~-----vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .++.||||+|.||..++..|+..+.  .     +++++.++  +.++....++.+....   . .-....+  ....+. 
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~---~-~~~~~~~--~~~~~~-   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP---L-LKDVIAT--DKEEIA-   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT---T-EEEEEEE--SCHHHH-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc---c-cCCEEEc--CCcHHH-
Confidence            5799999999999999999998875  4     88888864  3445555555542211   1 1111111  111222 


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CC-eEEEecCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RG-SIISTASV  155 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g-~iv~~sS~  155 (214)
                            +.+.|++|+.||.....     ..+   -...++.|+..    ++.+.+.+.+.+ .+ .++++|..
T Consensus        77 ------~~daDvVvitAg~prkp-----G~t---R~dll~~N~~i----~~~i~~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           77 ------FKDLDVAILVGSMPRRD-----GME---RKDLLKANVKI----FKCQGAALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             ------TTTCSEEEECCSCCCCT-----TCC---TTTTHHHHHHH----HHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             ------hCCCCEEEEeCCCCCCC-----CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEcCCc
Confidence                  33789999999964221     122   24456677644    444455554443 35 47777664

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.24  E-value=0.00058  Score=55.29  Aligned_cols=70  Identities=17%  Similarity=0.279  Sum_probs=50.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+|+ |+||...++.+...|++|+++.+++++.+...+ +.   .   . .++    ++.+.+.+        
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG---a---~-~v~----~~~~~~~~--------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MG---V---K-HFY----TDPKQCKE--------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TT---C---S-EEE----SSGGGCCS--------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cC---C---C-eec----CCHHHHhc--------
Confidence            36899999997 999999999888899999999998877664432 21   1   1 122    34433221        


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                        ++|++|.++|.
T Consensus       234 --~~D~vid~~g~  244 (348)
T 3two_A          234 --ELDFIISTIPT  244 (348)
T ss_dssp             --CEEEEEECCCS
T ss_pred             --CCCEEEECCCc
Confidence              79999999884

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.21  E-value=0.0014  Score=54.35  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=37.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      .+.+++++|+|+ |.+|..+++.+...|++|++.+++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 8999999999999999999999988766554

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.20  E-value=0.00061  Score=55.07  Aligned_cols=77  Identities=10%  Similarity=0.155  Sum_probs=51.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .|+++||+|+ |+||...++.+...  |++|+.+.+++++.+...+ +..      . .+  .|..+.   .+..+++.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lGa------~-~v--i~~~~~---~~~~~~~~~  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LGA------D-YV--SEMKDA---ESLINKLTD  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HTC------S-EE--ECHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hCC------C-EE--eccccc---hHHHHHhhc
Confidence            7899999999 89999999988888  9999999988766554432 211      1 11  233220   122233322


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                       ..++|++|.++|.
T Consensus       236 -g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 -GLGASIAIDLVGT  248 (344)
T ss_dssp             -TCCEEEEEESSCC
T ss_pred             -CCCccEEEECCCC
Confidence             2279999999983

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.19  E-value=0.00071  Score=54.15  Aligned_cols=75  Identities=23%  Similarity=0.298  Sum_probs=50.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|++++|+||+|++|...++.+...|++|+.+.++. +. +..+++.   .   .   ...|..+.+.+.+       .
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~lG---a---~---~~i~~~~~~~~~~-------~  212 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKALG---A---E---QCINYHEEDFLLA-------I  212 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHHT---C---S---EEEETTTSCHHHH-------C
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHcC---C---C---EEEeCCCcchhhh-------h
Confidence            4689999999999999999999999999998887543 22 2223221   1   1   1235555442222       2


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      ..++|++|.++|.
T Consensus       213 ~~g~D~v~d~~g~  225 (321)
T 3tqh_A          213 STPVDAVIDLVGG  225 (321)
T ss_dssp             CSCEEEEEESSCH
T ss_pred             ccCCCEEEECCCc
Confidence            2479999999883

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.19  E-value=0.015  Score=45.53  Aligned_cols=171  Identities=12%  Similarity=0.088  Sum_probs=93.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHH-cCCeEE-EEecCCcc--hhhHH-------------HHhhccCCCCCCceEEEeeCCC
Q 044923           14 KVALITGGAGSIGECAARLFSK-HGAKVL-IADIKDDL--GESVC-------------EDISSSSSSANGCSYVHCDVTK   76 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~-~g~~vi-~~~r~~~~--~~~~~-------------~~~~~~~~~~~~v~~~~~D~~~   76 (214)
                      .++.|+|++|.+|+.+++.+.+ .+..|+ +++++.+.  .++..             .++.+.-   ..+. +..|+|.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l---~~~D-vVIDft~   81 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK---DDFD-VFIDFTR   81 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT---TSCS-EEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh---cCCC-EEEEcCC
Confidence            4799999999999999998875 477766 55554432  11110             0011000   0122 4569999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHH-------Hhhhhh----HHHHHHHHHHHhhccCC
Q 044923           77 EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI-------LSVNLV----GAFLGTKHAARVMKPAG  145 (214)
Q Consensus        77 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~-------~~~n~~----~~~~~~~~~~~~~~~~~  145 (214)
                      ++...+.+....+.  ++++++-..|+...        ..+.+.+.       +..|+-    -.+.+.+.+.+++...-
T Consensus        82 p~~~~~~~~~a~~~--G~~vVigTtG~~~e--------~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~~~  151 (273)
T 1dih_A           82 PEGTLNHLAFCRQH--GKGMVIGTTGFDEA--------GKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYT  151 (273)
T ss_dssp             HHHHHHHHHHHHHT--TCEEEECCCCCCHH--------HHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred             hHHHHHHHHHHHhC--CCCEEEECCCCCHH--------HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence            99888888777766  67788877764210        01112211       111110    12334444444443110


Q ss_pred             CCeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHH---------------ccCCcEEEEEeCCcccCc
Q 044923          146 RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL---------------GRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       146 ~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~---------------~~~gi~v~~v~Pg~v~t~  203 (214)
                      .--|+     ......+-.++|++++.-.+.+.+.+...+               .+.+|.+.++.-|.+-.+
T Consensus       152 dieii-----E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          152 DIEII-----EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             EEEEE-----EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             CEEEE-----EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            00111     123344456789999987777766554322               135788988886655443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.18  E-value=0.00088  Score=54.77  Aligned_cols=80  Identities=18%  Similarity=0.215  Sum_probs=51.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|+++||+|+ |+||...++.+...|+ +|+.+.+++++.+... ++..      . .  ..|..+ .+++.+.+.++.
T Consensus       190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa------~-~--vi~~~~~~~~~~~~i~~~t  258 (373)
T 1p0f_A          190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGA------T-E--CLNPKDYDKPIYEVICEKT  258 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTC------S-E--EECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCC------c-E--EEecccccchHHHHHHHHh
Confidence            35899999996 8999999988888899 7888888877665443 2211      1 1  134332 122333333222


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                        .+.+|++|.++|.
T Consensus       259 --~gg~Dvvid~~g~  271 (373)
T 1p0f_A          259 --NGGVDYAVECAGR  271 (373)
T ss_dssp             --TSCBSEEEECSCC
T ss_pred             --CCCCCEEEECCCC
Confidence              1479999999984

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.18  E-value=0.0053  Score=49.16  Aligned_cols=146  Identities=15%  Similarity=0.138  Sum_probs=81.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++.|+|+ |.+|..++..|+..+.  .|++.+.++++++....++.+.......+.+. .  ++.+           .+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~-----------a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS-----------DV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH-----------Hh
Confidence            56888898 9999999999999987  79999998877776555554432111112111 1  1222           13


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------CCCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------GGVT  163 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~~~~  163 (214)
                      .+.|++|..+|....     ...+.   ...+..|+.-...+.+.+.++   ...+.++++|......        +.|.
T Consensus        73 ~~aDvVii~~g~p~k-----~g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~~~~~~k~s~~p~  141 (318)
T 1y6j_A           73 KDCDVIVVTAGANRK-----PGETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPVDIITYMIQKWSGLPV  141 (318)
T ss_dssp             TTCSEEEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSHHHHHHHHHHHHTCCT
T ss_pred             CCCCEEEEcCCCCCC-----CCcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcHHHHHHHHHHHcCCCH
Confidence            478999999997421     12233   235666765444555555444   2356667665543332        2333


Q ss_pred             Cccchh-hHHHHHHHHHHHHHHH
Q 044923          164 SHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       164 ~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      ....+. +-.-...+...++..+
T Consensus       142 ~rviG~gt~Ld~~r~~~~la~~l  164 (318)
T 1y6j_A          142 GKVIGSGTVLDSIRFRYLLSEKL  164 (318)
T ss_dssp             TTEEECTTHHHHHHHHHHHHTTT
T ss_pred             HHEeccCCchHHHHHHHHHHHHh
Confidence            344454 3344455666666654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.18  E-value=0.00081  Score=55.91  Aligned_cols=59  Identities=27%  Similarity=0.369  Sum_probs=43.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      +..++|.|. |-+|..+++.|.++|.+|+++.++++..+...+.         .+.++.+|.++++.+.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~---------g~~vi~GDat~~~~L~   62 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF---------GMKVFYGDATRMDLLE   62 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT---------TCCCEESCTTCHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC---------CCeEEEcCCCCHHHHH
Confidence            346889997 6799999999999999999999998766554321         2344556666655443

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.15  E-value=0.00057  Score=56.01  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=52.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -.|+++||+|+ |+||...++.+...|+ +|+++++++++++.. +++.   .   . .  ..|..+ .+++.+.+.++.
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lG---a---~-~--vi~~~~~~~~~~~~i~~~~  260 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFG---V---N-E--FVNPKDHDKPIQEVIVDLT  260 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTT---C---C-E--EECGGGCSSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcC---C---c-E--EEccccCchhHHHHHHHhc
Confidence            35899999998 9999999998888899 799999888766533 2221   1   1 1  234432 222333333222


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                        .+++|++|.++|.
T Consensus       261 --~gg~D~vid~~g~  273 (378)
T 3uko_A          261 --DGGVDYSFECIGN  273 (378)
T ss_dssp             --TSCBSEEEECSCC
T ss_pred             --CCCCCEEEECCCC
Confidence              2479999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.14  E-value=0.00059  Score=55.81  Aligned_cols=77  Identities=23%  Similarity=0.386  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH-
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS-   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-   89 (214)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.. +++..      .   ...|.++.+..+    .+.+ 
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa------~---~vi~~~~~~~~~----~i~~~  246 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVGA------T---ATVDPSAGDVVE----AIAGP  246 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTC------S---EEECTTSSCHHH----HHHST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC------C---EEECCCCcCHHH----HHHhh
Confidence            5899999998 8999999998888999 788888877655433 33211      1   123555443222    2222 


Q ss_pred             --H-cCCccEEEeCCcc
Q 044923           90 --Q-YGKLDIMFNNAGI  103 (214)
Q Consensus        90 --~-~g~id~li~~ag~  103 (214)
                        . .+++|++|.++|.
T Consensus       247 ~~~~~gg~Dvvid~~G~  263 (370)
T 4ej6_A          247 VGLVPGGVDVVIECAGV  263 (370)
T ss_dssp             TSSSTTCEEEEEECSCC
T ss_pred             hhccCCCCCEEEECCCC
Confidence              1 2479999999883

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.13  E-value=0.0037  Score=50.22  Aligned_cols=120  Identities=18%  Similarity=0.205  Sum_probs=69.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.+++.|+|+ |.+|.+++..|+..|. .|++.++++++++....++..... ......+...  +|.+           
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~-----------   71 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA-----------   71 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG-----------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH-----------
Confidence            4567999998 9999999999999998 899999998877654444443210 0001122211  1221           


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      .+.+.|++|..+|....  .   ..+.   .+.++.|..-.-.+.+.+..+-   ..+.++++|...
T Consensus        72 a~~~aDiVIiaag~p~k--~---G~~R---~dl~~~N~~i~~~i~~~i~~~~---p~a~iivvtNPv  127 (324)
T 3gvi_A           72 AIEGADVVIVTAGVPRK--P---GMSR---DDLLGINLKVMEQVGAGIKKYA---PEAFVICITNPL  127 (324)
T ss_dssp             GGTTCSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSH
T ss_pred             HHCCCCEEEEccCcCCC--C---CCCH---HHHHHhhHHHHHHHHHHHHHHC---CCeEEEecCCCc
Confidence            12378999999997422  1   1122   2345566533333333333332   346677777644

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.12  E-value=0.0019  Score=50.10  Aligned_cols=98  Identities=12%  Similarity=0.247  Sum_probs=58.5

Q ss_pred             CCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhcc--C---CCCCCceEEEeeCCCHH
Q 044923            5 NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSS--S---SSANGCSYVHCDVTKEK   78 (214)
Q Consensus         5 ~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~--~---~~~~~v~~~~~D~~~~~   78 (214)
                      +.|+..+++.++.|.|+ |.+|..+++.|++.|++ |.+.+|+++..+...+...-.  .   .....+.++-. ..-++
T Consensus         2 ~~m~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~-av~~~   79 (266)
T 3d1l_A            2 NAMKRSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV-SLKDS   79 (266)
T ss_dssp             -----CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE-CCCHH
T ss_pred             chhhcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE-ecCHH
Confidence            34555566667889997 89999999999999998 888889887776655542100  0   00012223322 22344


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccc
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~  104 (214)
                      .+.++++++.+...+=.+++++++..
T Consensus        80 ~~~~v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           80 AFAELLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHHHHHhhcCCCcEEEECCCCC
Confidence            56777777765443334677776543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.08  E-value=0.0014  Score=54.17  Aligned_cols=78  Identities=24%  Similarity=0.419  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|+++||+|+ |++|...++.+...|+ +|+++++++++.+.. +++..      .   ...|..+.+.    .+++++
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa------~---~vi~~~~~~~----~~~i~~  276 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGA------D---HVIDPTKENF----VEAVLD  276 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTC------S---EEECTTTSCH----HHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC------C---EEEcCCCCCH----HHHHHH
Confidence            46899999998 8999999998888999 788888887665443 33211      1   1234444332    233333


Q ss_pred             Hc-C-CccEEEeCCcc
Q 044923           90 QY-G-KLDIMFNNAGI  103 (214)
Q Consensus        90 ~~-g-~id~li~~ag~  103 (214)
                      .. + ++|++|.++|.
T Consensus       277 ~t~g~g~D~vid~~g~  292 (404)
T 3ip1_A          277 YTNGLGAKLFLEATGV  292 (404)
T ss_dssp             HTTTCCCSEEEECSSC
T ss_pred             HhCCCCCCEEEECCCC
Confidence            33 2 69999999984

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.07  E-value=0.0079  Score=47.60  Aligned_cols=144  Identities=14%  Similarity=0.120  Sum_probs=81.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.|+|+ |.+|.+++..|++.|.  .|.+.++++++++....++..... ......+...  +|.+.           +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------h
Confidence            4788999 9999999999999997  799999998776533333332110 0011222211  12222           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCccc--------CCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVI--------GGV  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~--------~~~  162 (214)
                      .+-|++|..+|....     ...+..   +.++.|.    ...+.+.+.+.+. ..+.++++|...-..        +.|
T Consensus        68 ~~aDiVViaag~~~k-----pG~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~~k~~g~p  135 (294)
T 1oju_A           68 KGSEIIVVTAGLARK-----PGMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKP  135 (294)
T ss_dssp             TTCSEEEECCCCCCC-----SSCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEECCCCCCC-----CCCcHH---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHHHHhcCCC
Confidence            278999999997422     123443   3466665    4445555555544 356677776543221        233


Q ss_pred             CCccchh-hHHHHHHHHHHHHHHH
Q 044923          163 TSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       163 ~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      .....+. +-.--..|-..++ ++
T Consensus       136 ~~rviG~gt~LD~~R~~~~la-~l  158 (294)
T 1oju_A          136 RNEVFGMGNQLDSQRLKERLY-NA  158 (294)
T ss_dssp             TTSEEECSHHHHHHHHHHHHH-HT
T ss_pred             HHHEeecccccHHHHHHHHHH-Hh
Confidence            3444555 2333344555566 54

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0016  Score=53.76  Aligned_cols=77  Identities=18%  Similarity=0.302  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|+++||.|+ |++|...++.+...|+ +|+++++++++++... ++        ...  ..|.++.+.+.   +++++.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l--------Ga~--~i~~~~~~~~~---~~v~~~  249 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ--------GFE--IADLSLDTPLH---EQIAAL  249 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT--------TCE--EEETTSSSCHH---HHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc--------CCc--EEccCCcchHH---HHHHHH
Confidence            6899999995 9999999988888899 5888888876654442 22        122  24555433222   223332


Q ss_pred             c--CCccEEEeCCcc
Q 044923           91 Y--GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~--g~id~li~~ag~  103 (214)
                      .  .++|++|.++|.
T Consensus       250 t~g~g~Dvvid~~G~  264 (398)
T 1kol_A          250 LGEPEVDCAVDAVGF  264 (398)
T ss_dssp             HSSSCEEEEEECCCT
T ss_pred             hCCCCCCEEEECCCC
Confidence            2  269999999985

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.01  E-value=0.0098  Score=47.26  Aligned_cols=145  Identities=15%  Similarity=0.165  Sum_probs=75.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|+ |.+|..++..|+..|.  .|++.++++++++....++.........+.+..   ++.+.           +.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-----------hC
Confidence            5788998 9999999999999998  899999987766544444433221111122221   12221           23


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc------CCCCCcc
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI------GGVTSHA  166 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------~~~~~~~  166 (214)
                      +.|++|.++|.....     ..+.   ...+..|+.-.-.+.+.+.++   ...+.++++|......      ..|....
T Consensus        67 ~aDvVIi~~~~~~~~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~~~~~~~~~~~~~~~rv  135 (304)
T 2v6b_A           67 DAQVVILTAGANQKP-----GESR---LDLLEKNADIFRELVPQITRA---APDAVLLVTSNPVDLLTDLATQLAPGQPV  135 (304)
T ss_dssp             TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSHHHHHHHHHHHSCSSCE
T ss_pred             CCCEEEEcCCCCCCC-----CCcH---HHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCchHHHHHHHHHhCChhcE
Confidence            789999999864311     1111   234555654444444555444   2345566655543321      0122233


Q ss_pred             chh-hHHHHHHHHHHHHHHH
Q 044923          167 YTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       167 y~~-sK~a~~~l~~~la~e~  185 (214)
                      .+. +-.-...+...++..+
T Consensus       136 iG~gt~Ld~~r~~~~la~~l  155 (304)
T 2v6b_A          136 IGSGTVLDSARFRHLMAQHA  155 (304)
T ss_dssp             EECTTHHHHHHHHHHHHHHH
T ss_pred             EeCCcCchHHHHHHHHHHHh
Confidence            344 3333455666666665

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.99  E-value=0.0036  Score=50.24  Aligned_cols=120  Identities=15%  Similarity=0.153  Sum_probs=71.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.+++.|+|+ |.+|.+++..|+..|. .|++.++++++++....++.+... ......+...  +|.+           
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~-----------   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK-----------   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH-----------
Confidence            3467888885 9999999999999988 899999998877655555554211 0011222211  1222           


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      .+.+.|++|..+|....     ...+..   +.++.|..-.-.+.+.+..+-   +.+.+++++...
T Consensus        70 a~~~aDvVIi~ag~p~k-----~G~~R~---dl~~~N~~i~~~i~~~i~~~~---p~a~vivvtNPv  125 (321)
T 3p7m_A           70 DLENSDVVIVTAGVPRK-----PGMSRD---DLLGINIKVMQTVGEGIKHNC---PNAFVICITNPL  125 (321)
T ss_dssp             GGTTCSEEEECCSCCCC-----TTCCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECCSSH
T ss_pred             HHCCCCEEEEcCCcCCC-----CCCCHH---HHHHHhHHHHHHHHHHHHHHC---CCcEEEEecCch
Confidence            12378999999997432     123443   345566643334444443332   345677776543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.99  E-value=0.002  Score=51.16  Aligned_cols=42  Identities=24%  Similarity=0.283  Sum_probs=36.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      .++.|++++|.|+ |+||+++++.|...|++|++.+|+.++.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4688999999996 89999999999999999999999875443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.98  E-value=0.0011  Score=53.89  Aligned_cols=38  Identities=8%  Similarity=0.170  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      .|+++||+||+|++|...++.+...|++++++.++.+.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            68999999999999999998887889998887765543

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.97  E-value=0.0059  Score=47.04  Aligned_cols=77  Identities=12%  Similarity=0.147  Sum_probs=56.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++.|+|++|.+|+.+++.+.+. ++.++......+.+++...   .      ++. +..|+|.++.+.+.+....+.  +
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---~------~~D-vvIDfT~p~a~~~~~~~a~~~--g   69 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---G------NTE-VVIDFTHPDVVMGNLEFLIDN--G   69 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---T------TCC-EEEECSCTTTHHHHHHHHHHT--T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---c------CCc-EEEEccChHHHHHHHHHHHHc--C
Confidence            5899999999999999999866 8887765544433333221   1      112 578999999998888776665  6


Q ss_pred             ccEEEeCCcc
Q 044923           94 LDIMFNNAGI  103 (214)
Q Consensus        94 id~li~~ag~  103 (214)
                      +++|+...|+
T Consensus        70 ~~~VigTTG~   79 (245)
T 1p9l_A           70 IHAVVGTTGF   79 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEcCCCC
Confidence            8899988874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.97  E-value=0.0024  Score=52.57  Aligned_cols=44  Identities=25%  Similarity=0.268  Sum_probs=38.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      .+.+++++|+|+ |++|+.+++.+...|++|++.+++.++.+...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            568999999996 89999999999999999999999887665543

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.94  E-value=0.027  Score=45.20  Aligned_cols=149  Identities=15%  Similarity=0.134  Sum_probs=85.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      -+..++.|+|+ |.+|..++..|+..+.  .+++.+.++++++....++.+.......+.+.. |  +.+.         
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a---------   73 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD---------   73 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH---------
Confidence            34467999999 9999999999998885  699999988777665565554321111222322 2  2222         


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------C
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------G  160 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~  160 (214)
                        +.+.|++|..+|....     ...+..   ..+..|.--...+.+.+..+   ...+.++++|......        +
T Consensus        74 --~~~aDvVii~ag~~~k-----~g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~  140 (326)
T 2zqz_A           74 --AKDADLVVITAGAPQK-----PGETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVDILTYATWKLSG  140 (326)
T ss_dssp             --GGGCSEEEECCCCC----------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHHHHHHHHHHHHC
T ss_pred             --hCCCCEEEEcCCCCCC-----CCCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHHHHHHHHHHHcC
Confidence              2378999999997421     122333   34566654333444444333   2456777776644432        2


Q ss_pred             CCCCccchh-hHHHHHHHHHHHHHHH
Q 044923          161 GVTSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       161 ~~~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      .|.....+. +-.-...+...++..+
T Consensus       141 ~p~~rviG~gt~LD~~R~~~~la~~l  166 (326)
T 2zqz_A          141 FPKNRVVGSGTSLDTARFRQSIAEMV  166 (326)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEEccccchHHHHHHHHHHHh
Confidence            333334444 3333455666666665

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.92  E-value=0.0097  Score=48.73  Aligned_cols=85  Identities=20%  Similarity=0.264  Sum_probs=56.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeC-----------CCHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV-----------TKEK   78 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~-----------~~~~   78 (214)
                      .+++++++|+|+ |.+|..+++.+...|++|++.+++.++++...+ +.        ..++..|+           ...+
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lG--------a~~~~l~~~~~~~~gya~~~~~~  250 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VG--------AQWLDLGIDAAGEGGYARELSEA  250 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TT--------CEECCCC-------------CHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC--------CeEEeccccccccccchhhhhHH
Confidence            467899999999 799999999999999999999999877665544 21        11211111           0011


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCccc
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~  104 (214)
                      ....-...+.+.....|++|.++...
T Consensus       251 ~~~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          251 ERAQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             HHhhhHHHHHHHHhcCCEEEECCCCC
Confidence            12223344445556899999987654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.91  E-value=0.0027  Score=50.21  Aligned_cols=41  Identities=32%  Similarity=0.427  Sum_probs=36.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      .++.||+++|.|+ |+||+++++.|...|++|++.+|+.+..
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~  191 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL  191 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            3688999999995 8999999999999999999999887543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.91  E-value=0.025  Score=45.47  Aligned_cols=119  Identities=11%  Similarity=0.031  Sum_probs=71.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEE-EeeCCCHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYV-HCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+++.|+|+ |.+|..+|..|+..|.  .|++.+.++++++....++.+.........+. ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4578999999 9999999999999997  79999998877766655554421100111222 224322            


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                        +.+.|++|..||.....     .++.   .+.+..|..-.-.+.+.+.++   ...+.++++|...
T Consensus        87 --~~daDiVIitaG~p~kp-----G~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQE-----GESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELG  141 (330)
T ss_dssp             --CSSCSEEEECCSCCCCS-----SCCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSH
T ss_pred             --hCCCCEEEEeCCCCCCC-----CCCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCcc
Confidence              23789999999975321     1222   234455543223333333333   2356677777643

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.89  E-value=0.015  Score=46.30  Aligned_cols=146  Identities=16%  Similarity=0.180  Sum_probs=78.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++.|+|+ |.+|..++..|+..|. +|++.+.++++++....++.+... ......+...  +|.+.           +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------H
Confidence            46899999 9999999999999996 899999888777655555443210 0001112211  22221           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCccc--------CCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVI--------GGV  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--------~~~  162 (214)
                      .+.|++|..+|.....     ..+.   ...+..|.    ...+.+.+.+.+.. .+.++++|......        +.|
T Consensus        69 ~~aD~Vi~a~g~p~~~-----g~~r---~dl~~~n~----~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~~~~~~~~  136 (309)
T 1ur5_A           69 ANSDVIVVTSGAPRKP-----GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFP  136 (309)
T ss_dssp             TTCSEEEECCCC----------------CHHHHHHH----HHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHHHHHHCCC
T ss_pred             CCCCEEEEcCCCCCCC-----CCCH---HHHHHHHH----HHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHHHHHcCCC
Confidence            3789999999974321     1111   12344444    34444555555443 34455554433221        123


Q ss_pred             CCccchh-hHHHHHHHHHHHHHHH
Q 044923          163 TSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       163 ~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      .....+. +-.-...+...++..+
T Consensus       137 ~~rviG~gt~LD~~r~~~~la~~l  160 (309)
T 1ur5_A          137 KERVIGQAGVLDAARYRTFIAMEA  160 (309)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHH
T ss_pred             HHHEEECCcchHHHHHHHHHHHHh
Confidence            3334444 2223455666666665

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.88  E-value=0.00076  Score=55.09  Aligned_cols=46  Identities=17%  Similarity=0.417  Sum_probs=39.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      +++||+++|+|. |.+|..+|+.|.+.|++|++.+++.+++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999997 7799999999999999999988887766655554

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.87  E-value=0.0027  Score=50.51  Aligned_cols=69  Identities=12%  Similarity=0.124  Sum_probs=46.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|+++||+|+ |++|...++.+...|++|+.+. ++++.+...+ +..      . .++  |  |.+       ++   
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-lGa------~-~v~--~--d~~-------~v---  196 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-RGV------R-HLY--R--EPS-------QV---  196 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-HTE------E-EEE--S--SGG-------GC---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-cCC------C-EEE--c--CHH-------Hh---
Confidence            36899999999 9999999998888899999998 7766655433 321      1 122  2  211       11   


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++|.++|.
T Consensus       197 ~~g~Dvv~d~~g~  209 (315)
T 3goh_A          197 TQKYFAIFDAVNS  209 (315)
T ss_dssp             CSCEEEEECC---
T ss_pred             CCCccEEEECCCc
Confidence            3579999999884

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.87  E-value=0.0022  Score=52.95  Aligned_cols=78  Identities=22%  Similarity=0.337  Sum_probs=51.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|+++||.|+ |+||...++.+...|+ +|+.+++++++.+... ++        ...  ..|..+.+.+.   +++.+
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l--------Ga~--~i~~~~~~~~~---~~~~~  248 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA--------GFE--TIDLRNSAPLR---DQIDQ  248 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT--------TCE--EEETTSSSCHH---HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc--------CCc--EEcCCCcchHH---HHHHH
Confidence            36899999997 9999999988888899 8999998876654332 21        122  24555433212   22222


Q ss_pred             Hc-C-CccEEEeCCcc
Q 044923           90 QY-G-KLDIMFNNAGI  103 (214)
Q Consensus        90 ~~-g-~id~li~~ag~  103 (214)
                      .. + ++|++|.++|.
T Consensus       249 ~~~g~g~Dvvid~~g~  264 (398)
T 2dph_A          249 ILGKPEVDCGVDAVGF  264 (398)
T ss_dssp             HHSSSCEEEEEECSCT
T ss_pred             HhCCCCCCEEEECCCC
Confidence            22 3 69999999985

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.86  E-value=0.022  Score=45.53  Aligned_cols=145  Identities=14%  Similarity=0.185  Sum_probs=82.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++.|+|+ |.+|..++..|+..+.  .+++.+.++++++....++.+.......+.+.. |  +.+.           +
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a-----------~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD-----------C   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------h
Confidence            57999998 9999999999999885  699999988777765566554321111222322 2  2221           3


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCccc--------CCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVI--------GGV  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~--------~~~  162 (214)
                      .+.|++|..+|.....     ..+.   ...+..|.-    ..+.+.+.+.+. ..+.++++|......        +.|
T Consensus        71 ~~aDvVii~ag~~~~~-----g~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p  138 (318)
T 1ez4_A           71 KDADLVVITAGAPQKP-----GESR---LDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFP  138 (318)
T ss_dssp             TTCSEEEECCCC------------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCC
T ss_pred             CCCCEEEECCCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCC
Confidence            3789999999974311     1122   234455553    334444444333 456777776644432        233


Q ss_pred             CCccchh-hHHHHHHHHHHHHHHH
Q 044923          163 TSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       163 ~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      .....+. +-.-...+...++..+
T Consensus       139 ~~rviG~gt~LD~~R~~~~la~~l  162 (318)
T 1ez4_A          139 KERVIGSGTSLDSSRLRVALGKQF  162 (318)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             HHHEEeccccchHHHHHHHHHHHh
Confidence            3334444 3333455666666665

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.86  E-value=0.0035  Score=50.57  Aligned_cols=36  Identities=19%  Similarity=0.410  Sum_probs=30.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.++++.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            367899999987 69999999999999975 7777663

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.84  E-value=0.002  Score=50.56  Aligned_cols=39  Identities=33%  Similarity=0.487  Sum_probs=35.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      -+++||+++|.|+++-+|+.+|..|++.|+.|.++.++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999887653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.82  E-value=0.0017  Score=52.84  Aligned_cols=36  Identities=22%  Similarity=0.491  Sum_probs=31.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCC
Confidence            467889999988 79999999999999974 8888765

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.81  E-value=0.0015  Score=52.46  Aligned_cols=42  Identities=24%  Similarity=0.427  Sum_probs=36.1

Q ss_pred             Cc-EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           13 GK-VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        13 ~k-~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      |+ +++|+||+|++|...++.+...|++|+++.+++++.+...
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~  192 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK  192 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            44 7999999999999999988889999999999877765543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.003  Score=51.51  Aligned_cols=78  Identities=14%  Similarity=0.183  Sum_probs=51.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|+++||+|+ |+||...++.+...|+ +|+.+++++++.+... ++..      . .  ..|..+.+..    +++.+
T Consensus       189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa------~-~--vi~~~~~~~~----~~~~~  253 (371)
T 1f8f_A          189 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGA------T-H--VINSKTQDPV----AAIKE  253 (371)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTC------S-E--EEETTTSCHH----HHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCC------C-E--EecCCccCHH----HHHHH
Confidence            35899999995 8999999988888899 5888888876654442 2211      1 1  2344443222    22333


Q ss_pred             Hc-CCccEEEeCCcc
Q 044923           90 QY-GKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~-g~id~li~~ag~  103 (214)
                      .. +++|++|.++|.
T Consensus       254 ~~~gg~D~vid~~g~  268 (371)
T 1f8f_A          254 ITDGGVNFALESTGS  268 (371)
T ss_dssp             HTTSCEEEEEECSCC
T ss_pred             hcCCCCcEEEECCCC
Confidence            22 379999999983

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.80  E-value=0.0027  Score=51.16  Aligned_cols=79  Identities=22%  Similarity=0.253  Sum_probs=51.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++.|+|| |.+|.++|..|++.|. +|++.+++++.++.....+..... ......+...  +|.+   +.++      
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---ea~~------   77 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYE---AALT------   77 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHH---HHHT------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe--CCHH---HHhC------
Confidence            57889998 9999999999999997 999999998777664333332100 0001111110  2322   2222      


Q ss_pred             CCccEEEeCCcccC
Q 044923           92 GKLDIMFNNAGIVD  105 (214)
Q Consensus        92 g~id~li~~ag~~~  105 (214)
                       +.|++|..+|...
T Consensus        78 -~aDiVi~a~g~p~   90 (331)
T 1pzg_A           78 -GADCVIVTAGLTK   90 (331)
T ss_dssp             -TCSEEEECCSCSS
T ss_pred             -CCCEEEEccCCCC
Confidence             7899999999753

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.75  E-value=0.0018  Score=52.47  Aligned_cols=78  Identities=13%  Similarity=0.179  Sum_probs=51.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|++++|+|+ |+||...++.+...|+ +|+++++++++.+.. +++..      . .  ..|..+.+    +.+++++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa------~-~--vi~~~~~~----~~~~v~~  229 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGA------T-D--IINYKNGD----IVEQILK  229 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTC------C-E--EECGGGSC----HHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCC------c-e--EEcCCCcC----HHHHHHH
Confidence            35889999985 8999999988888899 699988877655433 22211      1 1  23443332    2233444


Q ss_pred             Hc-C-CccEEEeCCcc
Q 044923           90 QY-G-KLDIMFNNAGI  103 (214)
Q Consensus        90 ~~-g-~id~li~~ag~  103 (214)
                      .. + ++|++|.++|.
T Consensus       230 ~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          230 ATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             HTTTCCEEEEEECSSC
T ss_pred             HcCCCCCCEEEECCCC
Confidence            33 2 69999999884

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.74  E-value=0.012  Score=48.54  Aligned_cols=45  Identities=22%  Similarity=0.285  Sum_probs=38.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE   55 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~   55 (214)
                      .+.+.+++|+|+ |.+|..+++.+...|++|++.+++.++++...+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            467899999999 799999999999999999999999877655543

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.69  E-value=0.00033  Score=56.91  Aligned_cols=38  Identities=34%  Similarity=0.630  Sum_probs=33.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      +++||++.|.| .|.||..+|+.|.+.|++|++.+.+.+
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~  209 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTE  209 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            68999999996 589999999999999999998877654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.68  E-value=0.0018  Score=52.15  Aligned_cols=72  Identities=18%  Similarity=0.217  Sum_probs=51.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .+.++|.|+ |.+|+.+++.|.++|. |+++.++++..+ ..+         ..+.++.+|.+|++.+.++      ...
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---------~~~~~i~gd~~~~~~L~~a------~i~  176 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---------SGANFVHGDPTRVSDLEKA------NVR  176 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---------TTCEEEESCTTSHHHHHHT------CST
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---------CCcEEEEeCCCCHHHHHhc------Chh
Confidence            457999997 8999999999999999 999988887655 322         1467788899988877654      112


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      +.|.++...+
T Consensus       177 ~a~~vi~~~~  186 (336)
T 1lnq_A          177 GARAVIVDLE  186 (336)
T ss_dssp             TEEEEEECCS
T ss_pred             hccEEEEcCC
Confidence            4566665443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.67  E-value=0.037  Score=44.21  Aligned_cols=147  Identities=12%  Similarity=0.123  Sum_probs=81.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCC-CCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSA-NGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..++.|+|+ |.+|..++..|+.+|.  .|++.+.++++++....++....... ..+.+. .  .+.+.          
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~--~~~~a----------   71 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-A--GEYSD----------   71 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-E--CCGGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-e--CCHHH----------
Confidence            357889998 9999999999999884  69999988766654444443321100 122222 2  22222          


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------CC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------GG  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~~  161 (214)
                       +.+.|++|..+|....     ...+..   ..+..|.--...+.+.+.++   ...+.++++|......        +.
T Consensus        72 -~~~aDvVvi~ag~~~~-----~g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~k~~~~  139 (317)
T 3d0o_A           72 -CHDADLVVICAGAAQK-----PGETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPVDILAYATWKFSGL  139 (317)
T ss_dssp             -GTTCSEEEECCCCCCC-----TTCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHHHHHHHHHHHHCC
T ss_pred             -hCCCCEEEECCCCCCC-----CCCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcHHHHHHHHHHHhCC
Confidence             2378999999997432     123333   34566653333333333333   2356677665543332        23


Q ss_pred             CCCccchh-hHHHHHHHHHHHHHHH
Q 044923          162 VTSHAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       162 ~~~~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      |.....+. +-.-...+...++..+
T Consensus       140 p~~rviG~gt~lD~~r~~~~la~~l  164 (317)
T 3d0o_A          140 PKERVIGSGTILDSARFRLLLSEAF  164 (317)
T ss_dssp             CGGGEEECTTHHHHHHHHHHHHHHH
T ss_pred             CHHHEEecCccccHHHHHHHHHHHh
Confidence            33334444 3333455666666665

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.66  E-value=0.0092  Score=47.69  Aligned_cols=153  Identities=17%  Similarity=0.167  Sum_probs=84.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.|+|+ |.+|.+++..|++.|.  .|++.++++++++....++.+... ....+.+...|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            4788896 9999999999999986  799999998777655555543210 00112222121  222           23


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCccc--------CCC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVI--------GGV  162 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~--------~~~  162 (214)
                      .+.|++|..+|.....     .++   =.+.++.|.    ...+.+.+.+.+. +.+.++++|......        +.|
T Consensus        68 ~~aDvVii~ag~~~kp-----G~~---R~dl~~~N~----~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p  135 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP-----GMS---RDDLLAKNT----EIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFP  135 (314)
T ss_dssp             TTCSEEEECCCC---------------CHHHHHHHH----HHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEECCCCCCCC-----CCC---HHHHHHhhH----HHHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCC
Confidence            3789999999974211     112   234566665    3444555555443 356677777643321        233


Q ss_pred             CCccchhh-HHHHHHHHHHHHHHHc--cCCcEEE
Q 044923          163 TSHAYTSS-KHGVVGLMKNTAVELG--RFGIRVN  193 (214)
Q Consensus       163 ~~~~y~~s-K~a~~~l~~~la~e~~--~~gi~v~  193 (214)
                      .....+.. -.--..+...++..++  +..|+..
T Consensus       136 ~~rviG~~t~LD~~R~~~~la~~lgv~~~~v~~~  169 (314)
T 3nep_X          136 TNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQAL  169 (314)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             hHHEEeecCchHHHHHHHHHHHHhCcCHHHeEEE
Confidence            33344444 3223445566666552  3344444

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.66  E-value=0.0013  Score=51.56  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=37.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      ++++++++|.|+ |++|+++++.|.+.|++|.+..|+.++.+++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            567899999996 79999999999999999999999876554443

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.65  E-value=0.043  Score=43.69  Aligned_cols=145  Identities=17%  Similarity=0.147  Sum_probs=84.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHG--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|+ |.+|..++..|+..+  ..+++.+.++++++....++.+.......+.+.. |  +.+.           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            6889998 999999999999987  4699999988777765556554321111222222 2  2222           23


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc--------CCCCC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI--------GGVTS  164 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------~~~~~  164 (214)
                      +.|++|..+|....     ...+..   ..+..|.--...+.+.+..+   ...+.++++|......        +.|..
T Consensus        67 ~aD~Vii~ag~~~~-----~g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~p~~  135 (310)
T 2xxj_A           67 GARAVVLAAGVAQR-----PGETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVDVMTQVAYALSGLPPG  135 (310)
T ss_dssp             TEEEEEECCCCCCC-----TTCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHHHHHHHHHHHTCCGG
T ss_pred             CCCEEEECCCCCCC-----CCcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchHHHHHHHHHHcCCCHH
Confidence            78999999997432     123443   34566654333333433333   2356777776644332        23333


Q ss_pred             ccchh-hHHHHHHHHHHHHHHH
Q 044923          165 HAYTS-SKHGVVGLMKNTAVEL  185 (214)
Q Consensus       165 ~~y~~-sK~a~~~l~~~la~e~  185 (214)
                      ...+. +-.-...+...++..+
T Consensus       136 rviG~gt~LD~~R~~~~la~~l  157 (310)
T 2xxj_A          136 RVVGSGTILDTARFRALLAEYL  157 (310)
T ss_dssp             GEEECTTHHHHHHHHHHHHHHH
T ss_pred             HEEecCcchhHHHHHHHHHHHh
Confidence            34454 3333455666666665

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.64  E-value=0.0028  Score=50.61  Aligned_cols=41  Identities=24%  Similarity=0.422  Sum_probs=35.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      |+ +||+||+|++|...++.+...|++|+.+.+++++.+...
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            46 999999999999999999999999999999887765553

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.60  E-value=0.0073  Score=47.85  Aligned_cols=88  Identities=16%  Similarity=0.104  Sum_probs=54.7

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhcc---C--CCCCCceEEEeeCCCHHHHHHHH---H
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS---S--SSANGCSYVHCDVTKEKDIENAV---N   85 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~---~--~~~~~v~~~~~D~~~~~~~~~~~---~   85 (214)
                      +++.|+| .|-+|..+++.|++.|++|++.+|++++.+.+.+.-...   .  .......++..=+.+...++.++   +
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~   86 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED   86 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence            4567775 689999999999999999999999987766654421100   0  00112345555555666666665   4


Q ss_pred             HHHHHcCCccEEEeCCc
Q 044923           86 TAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag  102 (214)
                      ++.+...+=.++|+...
T Consensus        87 ~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           87 GVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             CCGGGSCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            44444433345555544

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.59  E-value=0.003  Score=53.28  Aligned_cols=73  Identities=15%  Similarity=0.194  Sum_probs=55.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++|.|+ |-+|+.+|+.|.++|++|+++.++++..+.+.+.+        .+..+.+|.++++.+.++=      ..+.
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--------~~~~i~Gd~~~~~~L~~Ag------i~~a   69 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--------DLRVVNGHASHPDVLHEAG------AQDA   69 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--------SCEEEESCTTCHHHHHHHT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--------CcEEEEEcCCCHHHHHhcC------CCcC
Confidence            4777777 68999999999999999999999987776655443        3577889999988776551      1257


Q ss_pred             cEEEeCCc
Q 044923           95 DIMFNNAG  102 (214)
Q Consensus        95 d~li~~ag  102 (214)
                      |++|...+
T Consensus        70 d~~ia~t~   77 (461)
T 4g65_A           70 DMLVAVTN   77 (461)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEcC
Confidence            77775543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.57  E-value=0.017  Score=45.64  Aligned_cols=88  Identities=14%  Similarity=0.155  Sum_probs=58.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC---CCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS---ANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++.|+| .|-+|..+|+.|++.|++|++.+|++++.+.+.+.-......   .....++..=+.++..++++++++.+.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHh
Confidence            4577776 688999999999999999999999988776654421000000   001345555566677788888777765


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..+=.++|+...
T Consensus        95 l~~g~ivv~~st  106 (296)
T 3qha_A           95 AKPGTVIAIHST  106 (296)
T ss_dssp             CCTTCEEEECSC
T ss_pred             cCCCCEEEEeCC
Confidence            544456666654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.57  E-value=0.022  Score=45.08  Aligned_cols=114  Identities=15%  Similarity=0.140  Sum_probs=70.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.|+|+ |+||..+|..|+.++.  .+++.+.+++..+-...++...... .........  .|.+.           +
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-----------h
Confidence            3677795 9999999999998874  4999998877666666666542110 011222222  12221           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      .+-|++|..||....     ..++.+   +.++.|.    ...+.+.+.+.+.. .+.++.+|.
T Consensus        68 ~~aDvVvitAG~prk-----pGmtR~---dLl~~Na----~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           68 KGSEIIVVTAGLARK-----PGMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCC-----SSSCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCCCEEEEecCCCCC-----CCCchH---HHHHHHH----HHHHHHHHHHHhcCCceEEEEecC
Confidence            378999999997532     134553   4566776    55566666665554 455666655

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.55  E-value=0.0092  Score=51.67  Aligned_cols=36  Identities=19%  Similarity=0.410  Sum_probs=30.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.++++.
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D  359 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  359 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            467899999987 69999999999999975 7787764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.54  E-value=0.005  Score=48.31  Aligned_cols=39  Identities=21%  Similarity=0.228  Sum_probs=35.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      -+++||+++|.|.++-+|+.+|..|+..|++|.++.++.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            468999999999999999999999999999999886543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.54  E-value=0.0099  Score=47.87  Aligned_cols=102  Identities=19%  Similarity=0.248  Sum_probs=64.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|++++|+|+ |++|...++.+... |++|+.+++++++.+...+ +.   .   . .+  .|..+ +    +.+++.+
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-lG---a---~-~~--i~~~~-~----~~~~v~~  233 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-VG---A---D-AA--VKSGA-G----AADAIRE  233 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-TT---C---S-EE--EECST-T----HHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cC---C---C-EE--EcCCC-c----HHHHHHH
Confidence            36899999998 99999988877766 7889999888776554322 21   1   1 12  23322 2    2233333


Q ss_pred             Hc--CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           90 QY--GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        90 ~~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      ..  .++|++|.++|..                           ...+..++.+++  .|+++.++...+
T Consensus       234 ~t~g~g~d~v~d~~G~~---------------------------~~~~~~~~~l~~--~G~iv~~G~~~~  274 (345)
T 3jv7_A          234 LTGGQGATAVFDFVGAQ---------------------------STIDTAQQVVAV--DGHISVVGIHAG  274 (345)
T ss_dssp             HHGGGCEEEEEESSCCH---------------------------HHHHHHHHHEEE--EEEEEECSCCTT
T ss_pred             HhCCCCCeEEEECCCCH---------------------------HHHHHHHHHHhc--CCEEEEECCCCC
Confidence            22  2799999999841                           123445566655  478888876544

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.54  E-value=0.011  Score=49.07  Aligned_cols=74  Identities=15%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |++-+.+|+++|.|++ .+|+.+++.+.+.|++|++++.++....   ..+.        -..+..|..|.+.+.++++ 
T Consensus        29 ~~~~~~~~~IlIlG~G-~lg~~~~~aa~~lG~~v~v~d~~~~~p~---~~~a--------d~~~~~~~~d~~~l~~~a~-   95 (419)
T 4e4t_A           29 VSPILPGAWLGMVGGG-QLGRMFCFAAQSMGYRVAVLDPDPASPA---GAVA--------DRHLRAAYDDEAALAELAG-   95 (419)
T ss_dssp             CCCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCTTCHH---HHHS--------SEEECCCTTCHHHHHHHHH-
T ss_pred             cccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEECCCCcCch---hhhC--------CEEEECCcCCHHHHHHHHh-
Confidence            4456789999999864 7999999999999999998876543321   1111        1345578889988887773 


Q ss_pred             HHHHcCCccEEEe
Q 044923           87 AVSQYGKLDIMFN   99 (214)
Q Consensus        87 ~~~~~g~id~li~   99 (214)
                            ++|+++.
T Consensus        96 ------~~D~V~~  102 (419)
T 4e4t_A           96 ------LCEAVST  102 (419)
T ss_dssp             ------HCSEEEE
T ss_pred             ------cCCEEEE
Confidence                  5788873

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.53  E-value=0.017  Score=47.23  Aligned_cols=71  Identities=24%  Similarity=0.342  Sum_probs=51.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++....   ..+        .-..+..|..|.+.+.++++   
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~--------ad~~~~~~~~d~~~l~~~~~---   72 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYV--------AHEFIQAKYDDEKALNQLGQ---   72 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGG--------SSEEEECCTTCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhh--------CCEEEECCCCCHHHHHHHHH---
Confidence            3467899999986 57999999999999999999887654221   111        11456689999988887775   


Q ss_pred             HHcCCccEEE
Q 044923           89 SQYGKLDIMF   98 (214)
Q Consensus        89 ~~~g~id~li   98 (214)
                          .+|++.
T Consensus        73 ----~~dvi~   78 (377)
T 3orq_A           73 ----KCDVIT   78 (377)
T ss_dssp             ----HCSEEE
T ss_pred             ----hCCcce
Confidence                367763

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.52  E-value=0.0055  Score=47.82  Aligned_cols=37  Identities=11%  Similarity=0.148  Sum_probs=34.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ++||+++|.|+++-+|+.+|+.|.+.|++|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            7899999999999999999999999999999886643

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.47  E-value=0.016  Score=47.49  Aligned_cols=71  Identities=20%  Similarity=0.205  Sum_probs=50.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +.+.+|+++|.|++. +|+.+++.+.+.|++|++++.+......   .+        .-..+..|..|.+.+.++++   
T Consensus        10 ~~~~~k~IlIlG~G~-~g~~la~aa~~~G~~vi~~d~~~~~~~~---~~--------ad~~~~~~~~d~~~l~~~~~---   74 (389)
T 3q2o_A           10 IILPGKTIGIIGGGQ-LGRMMALAAKEMGYKIAVLDPTKNSPCA---QV--------ADIEIVASYDDLKAIQHLAE---   74 (389)
T ss_dssp             CCCTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSTTCTTT---TT--------CSEEEECCTTCHHHHHHHHH---
T ss_pred             cCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCCCCchH---Hh--------CCceEecCcCCHHHHHHHHH---
Confidence            346899999998764 9999999999999999998765432110   00        11345578888888777775   


Q ss_pred             HHcCCccEEE
Q 044923           89 SQYGKLDIMF   98 (214)
Q Consensus        89 ~~~g~id~li   98 (214)
                          ..|++.
T Consensus        75 ----~~dvI~   80 (389)
T 3q2o_A           75 ----ISDVVT   80 (389)
T ss_dssp             ----TCSEEE
T ss_pred             ----hCCEee
Confidence                467763

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.45  E-value=0.0054  Score=48.13  Aligned_cols=38  Identities=18%  Similarity=0.291  Sum_probs=34.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      -+++||.++|.|.++-+|+.+|+.|...|++|.++.++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999999999999999887654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.43  E-value=0.074  Score=42.55  Aligned_cols=77  Identities=21%  Similarity=0.349  Sum_probs=50.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++.|+|+ |.+|..++..|+..|. +|++.++++++++.....+..... ......+...  +|.+.           +
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~a-----------l   70 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYDD-----------L   70 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCHHH-----------h
Confidence            46888998 9999999999999998 899999998877655444443100 0001112211  22221           2


Q ss_pred             CCccEEEeCCccc
Q 044923           92 GKLDIMFNNAGIV  104 (214)
Q Consensus        92 g~id~li~~ag~~  104 (214)
                      .+.|++|..+|..
T Consensus        71 ~~aD~Vi~a~g~p   83 (322)
T 1t2d_A           71 AGADVVIVTAGFT   83 (322)
T ss_dssp             TTCSEEEECCSCS
T ss_pred             CCCCEEEEeCCCC
Confidence            3789999999974

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.43  E-value=0.014  Score=45.84  Aligned_cols=86  Identities=10%  Similarity=0.035  Sum_probs=57.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC---eEEEEecCCcchhhHHHHhhcc--CC-----CCCCceEEEeeCCCHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA---KVLIADIKDDLGESVCEDISSS--SS-----SANGCSYVHCDVTKEKDIENA   83 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~---~vi~~~r~~~~~~~~~~~~~~~--~~-----~~~~v~~~~~D~~~~~~~~~~   83 (214)
                      +++.|+|+ |-+|.++++.|++.|+   +|++.+|++++.+.+.+...-.  ..     ...++.++.+   .++.+.++
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v   79 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV   79 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence            56778877 8999999999999998   8999999988777665532100  00     0112222222   46778888


Q ss_pred             HHHHHHH-cCCccEEEeCCcc
Q 044923           84 VNTAVSQ-YGKLDIMFNNAGI  103 (214)
Q Consensus        84 ~~~~~~~-~g~id~li~~ag~  103 (214)
                      ++++... ..+=.++|++++.
T Consensus        80 l~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           80 CEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHhhccCCCeEEEEecCC
Confidence            8888776 5332377776553

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.40  E-value=0.11  Score=41.33  Aligned_cols=145  Identities=15%  Similarity=0.152  Sum_probs=81.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEe-eCCCHHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKH-G--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC-DVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~~~~~~~~~~   90 (214)
                      ++.|+||+|.+|.+++..|+++ +  ..+++++.++ ..+-...++....   ..+.+... .-.+.+.           
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~---~~~~v~~~~~~~~~~~-----------   66 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---TAVKIKGFSGEDATPA-----------   66 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC---SSEEEEEECSSCCHHH-----------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC---CCceEEEecCCCcHHH-----------
Confidence            5789999999999999999886 5  3588888876 4444444444321   12222211 1112222           


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-----------c
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-----------I  159 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~  159 (214)
                      +.+.|++|..||....     ..++.   .+.++.|..-...+.+.+..+   ...+.++++|.....           .
T Consensus        67 ~~~aDivii~ag~~rk-----pG~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd~~t~~a~~~~k~s  135 (312)
T 3hhp_A           67 LEGADVVLISAGVARK-----PGMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPVNTTVAIAAEVLKKA  135 (312)
T ss_dssp             HTTCSEEEECCSCSCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHHHHHHHHHHHHHHT
T ss_pred             hCCCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCcchhHHHHHHHHHHHc
Confidence            2378999999997431     12344   455666764444444444443   234667777653221           1


Q ss_pred             CC-CCCccchhhHHHHHHHHHHHHHHH
Q 044923          160 GG-VTSHAYTSSKHGVVGLMKNTAVEL  185 (214)
Q Consensus       160 ~~-~~~~~y~~sK~a~~~l~~~la~e~  185 (214)
                      +. |.....+.+..--..+...++..+
T Consensus       136 g~~p~~rv~G~~~LD~~R~~~~la~~l  162 (312)
T 3hhp_A          136 GVYDKNKLFGVTTLDIIRSNTFVAELK  162 (312)
T ss_dssp             TCCCTTSEEECCHHHHHHHHHHHHHHH
T ss_pred             CCCCcceEEEEechhHHHHHHHHHHHh
Confidence            22 444455665333344566666665

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.38  E-value=0.066  Score=42.71  Aligned_cols=117  Identities=14%  Similarity=0.162  Sum_probs=67.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|+ |.+|.+++..|++.|.  +|++.+++++.++.....+...........+. .  +|.+.           ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------hC
Confidence            5788998 9999999999999998  89999998877666544432211000011111 1  23221           22


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      +.|++|.+++.....     ..+..   ..+..|.--...+.+.+.++.   ..+.+|+++....
T Consensus        67 ~aDvViiav~~~~~~-----g~~r~---dl~~~n~~i~~~i~~~i~~~~---~~~~ii~~tNp~~  120 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKP-----GETRL---QLLGRNARVMKEIARNVSKYA---PDSIVIVVTNPVD  120 (319)
T ss_dssp             TCSEEEECCCCCCCS-----SCCHH---HHHHHHHHHHHHHHHHHHHHC---TTCEEEECSSSHH
T ss_pred             CCCEEEEccCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHhhC---CCeEEEEeCCcHH
Confidence            789999999975321     12222   234555433334444444442   3456666655443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.37  E-value=0.0066  Score=47.96  Aligned_cols=38  Identities=29%  Similarity=0.377  Sum_probs=34.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      -+++||.++|.|.++-+|+.+|+.|.+.|++|.++.|+
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            36899999999999999999999999999999988763

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.32  E-value=0.017  Score=45.26  Aligned_cols=41  Identities=17%  Similarity=0.275  Sum_probs=35.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      +++.|+|++|-+|.++++.|++.|++|++.+|+++..+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            57999999999999999999999999999999877665543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.29  E-value=0.0052  Score=47.68  Aligned_cols=46  Identities=24%  Similarity=0.391  Sum_probs=38.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHh
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~   57 (214)
                      +++| +++|.|+ |++|+++++.|.+.|++|.+..|+.++.+++.+..
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            5778 8999997 77999999999999999999999877666655443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.29  E-value=0.28  Score=38.22  Aligned_cols=80  Identities=14%  Similarity=0.201  Sum_probs=54.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEE-EecCCcc--h----------------hhHHHHhhccCCCCCCceEEEee
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLI-ADIKDDL--G----------------ESVCEDISSSSSSANGCSYVHCD   73 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~-~~r~~~~--~----------------~~~~~~~~~~~~~~~~v~~~~~D   73 (214)
                      .++.|+|++|.+|+.+++.+.+. +..++. ++|+.+.  .                .++.+.+..     .+   +..|
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~-----~D---VVID   79 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE-----AD---YLID   79 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH-----CS---EEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC-----CC---EEEE
Confidence            57999999999999999999875 666665 4555321  1                111111111     11   3579


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEeCCcc
Q 044923           74 VTKEKDIENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      +|.++...+.+....+.  ++++|+-+.|+
T Consensus        80 fT~p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           80 FTLPEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             CSCHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             cCCHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            99999988888777766  67899988774

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.27  E-value=0.047  Score=40.73  Aligned_cols=76  Identities=20%  Similarity=0.198  Sum_probs=49.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+..+++.|.| .|-+|.++++.|++.|.+|.+.+|+++       .+     .  ..+++-.=+. .+.+.++++++..
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~-----~--~aD~vi~av~-~~~~~~v~~~l~~   79 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------AT-----T--LGEIVIMAVP-YPALAALAKQYAT   79 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CS-----S--CCSEEEECSC-HHHHHHHHHHTHH
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------Hh-----c--cCCEEEEcCC-cHHHHHHHHHHHH
Confidence            35667899999 789999999999999999999988765       11     0  1233333333 6677788887766


Q ss_pred             HcCCccEEEeCCc
Q 044923           90 QYGKLDIMFNNAG  102 (214)
Q Consensus        90 ~~g~id~li~~ag  102 (214)
                      ... =.++++.+.
T Consensus        80 ~~~-~~~vi~~~~   91 (209)
T 2raf_A           80 QLK-GKIVVDITN   91 (209)
T ss_dssp             HHT-TSEEEECCC
T ss_pred             hcC-CCEEEEECC
Confidence            554 235555544

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.25  E-value=0.0097  Score=46.99  Aligned_cols=40  Identities=30%  Similarity=0.277  Sum_probs=35.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      ..+.||++.|.|- |.||.++|+.|...|++|+..+|+.+.
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~  157 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVD  157 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccc
Confidence            3588999999985 789999999999999999999887643

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.24  E-value=0.0092  Score=46.86  Aligned_cols=40  Identities=13%  Similarity=0.116  Sum_probs=35.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      -+++||+++|.|++.-+|+.+|+.|.+.|++|.++.++..
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  194 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK  194 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            3689999999999999999999999999999998865543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.24  E-value=0.0097  Score=47.58  Aligned_cols=40  Identities=15%  Similarity=0.054  Sum_probs=35.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      ..+.||++.|.|. |.||+++|+.|...|++|+..+|+.+.
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~  174 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKS  174 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCC
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence            4688999999986 799999999999999999999887653

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=96.22  E-value=0.042  Score=44.57  Aligned_cols=35  Identities=29%  Similarity=0.452  Sum_probs=26.3

Q ss_pred             CCcEEEEecCCChH---HHHHHHHHHHcCCeEEEEecC
Q 044923           12 QGKVALITGGAGSI---GECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        12 ~~k~~lItGas~gI---G~~ia~~L~~~g~~vi~~~r~   46 (214)
                      ++|.++.+|||||-   +.++|++|.++|++|.+++..
T Consensus         2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~   39 (365)
T 3s2u_A            2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTP   39 (365)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            45666666777664   789999999999998877643

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.21  E-value=0.016  Score=48.53  Aligned_cols=78  Identities=27%  Similarity=0.309  Sum_probs=52.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      +++++|+++|.|. |+.|.++|+.|+++|++|.+.+++........+.++..     .+.+......  ++   .     
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~-----gi~~~~g~~~--~~---~-----   68 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE-----GIKVVCGSHP--LE---L-----   68 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT-----TCEEEESCCC--GG---G-----
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC-----CCEEEECCCh--HH---h-----
Confidence            3578999999999 78999999999999999999998764322333444432     2333322211  10   1     


Q ss_pred             HHcCC-ccEEEeCCccc
Q 044923           89 SQYGK-LDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~-id~li~~ag~~  104 (214)
                        ... .|.+|.+.|+.
T Consensus        69 --~~~~~d~vv~spgi~   83 (451)
T 3lk7_A           69 --LDEDFCYMIKNPGIP   83 (451)
T ss_dssp             --GGSCEEEEEECTTSC
T ss_pred             --hcCCCCEEEECCcCC
Confidence              114 89999998874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.21  E-value=0.46  Score=40.55  Aligned_cols=150  Identities=11%  Similarity=0.053  Sum_probs=90.8

Q ss_pred             ccCCcEEEEecCCC-hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAG-SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~-gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ...|.+.++....+ +++..++..|.++|.+++.+.-...                          .|.+.+.+.+.+..
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~--------------------------~~~~~~~~~l~~~~  100 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL--------------------------GDRQRLAATLGEAL  100 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT--------------------------CCHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC--------------------------CCHHHHHHHHHhhh
Confidence            45678877776554 3889999999999999776533211                          05666666666333


Q ss_pred             -HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           89 -SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 -~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                       ...+.++.+++..+.............        ...+.+.+.+.|++...-.   ..++.+++..+-.. .+....-
T Consensus       101 ~~~~~~~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~~~~---~~~l~~vT~ga~~~-~~~~~~~  168 (525)
T 3qp9_A          101 AAAGGAVDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALEDAGV---AAPLWCVTHGAVSV-GRADHVT  168 (525)
T ss_dssp             HHTTSCCSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHHTTC---CSCEEEEEESCCCC-BTTBCCS
T ss_pred             hcccCCCCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHhcCC---CCcEEEEECCCEeC-CCCCCCC
Confidence             556788999998876532211111111        1234556677777655321   24566555533221 1222234


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSP  197 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~P  197 (214)
                      ...++++.+|.|+++.|+.....+...+.+
T Consensus       169 ~p~~a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          169 SPAQAMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             CHHHHHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             CHHHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            678899999999999998654444555544

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.20  E-value=0.011  Score=47.52  Aligned_cols=78  Identities=22%  Similarity=0.254  Sum_probs=47.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..|.+++|.|+ ||+|...++.+++. |++|+.+++++++.+... ++.   .   .   ...|.++.+..++    +.+
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~G---a---~---~~i~~~~~~~~~~----v~~  226 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIG---A---D---VTINSGDVNPVDE----IKK  226 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTT---C---S---EEEEC-CCCHHHH----HHH
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcC---C---e---EEEeCCCCCHHHH----hhh
Confidence            35889999987 67777777777665 788999998876643322 221   1   1   1235555443333    333


Q ss_pred             HcC--CccEEEeCCcc
Q 044923           90 QYG--KLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g--~id~li~~ag~  103 (214)
                      ..+  .+|.++.+++.
T Consensus       227 ~t~g~g~d~~~~~~~~  242 (348)
T 4eez_A          227 ITGGLGVQSAIVCAVA  242 (348)
T ss_dssp             HTTSSCEEEEEECCSC
T ss_pred             hcCCCCceEEEEeccC
Confidence            322  57888887763

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.20  E-value=0.0088  Score=47.25  Aligned_cols=39  Identities=21%  Similarity=0.270  Sum_probs=35.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      -+++||+++|.|++.-+|+.+|+.|...|++|.++.++.
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  199 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT  199 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence            468999999999999999999999999999999886543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.19  E-value=0.022  Score=45.46  Aligned_cols=91  Identities=12%  Similarity=0.099  Sum_probs=57.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC----CCCceEEEeeCCCHHHHHHHHH-
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS----ANGCSYVHCDVTKEKDIENAVN-   85 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~-   85 (214)
                      .+.+++.|+|. |-+|..+++.|++.|++|++.+|++++.+.+.+.-......    .....++..=+.++..++.++. 
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            34567788855 88999999999999999999999887665544320000000    0123444455556667777775 


Q ss_pred             -HHHHHcCCccEEEeCCc
Q 044923           86 -TAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        86 -~~~~~~g~id~li~~ag  102 (214)
                       .+.+...+=.++|+...
T Consensus       108 ~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence             56655544456666554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	5e-57
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	7e-56
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-54
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-54
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-53
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-53
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	6e-53
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-50
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-48
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-48
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-48
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-48
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-48
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-46
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-46
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-46
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-44
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-44
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	9e-44
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-43
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-43
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	8e-43
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-42
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-42
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-41
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-41
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-41
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-41
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-40
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-40
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-40
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-40
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-40
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-39
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-39
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-39
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-38
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-38
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-38
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-38
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-37
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	5e-36
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-35
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-35
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-34
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-34
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-34
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-33
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-33
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-33
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-32
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-32
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-31
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	6e-31
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-29
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-28
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-24
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	5e-23
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-23
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	3e-19
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-18
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-16
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-16
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-16
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-16
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	7e-14
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-13
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-09
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-07
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-06
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-06
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	7e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	3e-05
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	5e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	7e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.001
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.001
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	0.001
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.002
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.002
d1leha1	230	c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillu	0.003
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.004
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.004

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  178 bits (454), Expect = 5e-57
 Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 11/205 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              GK  L+TGGA  IG   A+ F++ GA V + D++ + G+ V E I        G ++
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAI--------GGAF 52

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D+  E++    V  A    G++D++ NNA I      + L     E+ R+L VNL  
Sbjct: 53  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTA 110

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               +  AAR M+  G G+I++ ASV G+     + AY +SK G+V L ++ A++L    
Sbjct: 111 PMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLR 170

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IRVN V+P A+++      + L  D
Sbjct: 171 IRVNAVAPGAIATEAVLEAIALSPD 195

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  176 bits (447), Expect = 7e-56
 Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 2/207 (0%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R   KVA+ITG +  IG   A LF++ GAKV I     +  E   + I ++  S    + 
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPN--ILDNDQAEFERILSVNL 127
           V  DVT +   +  ++T + ++GKLDI+ NNAG       +          ++  L++NL
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
                 TK A   +       +  ++   G+        Y+ +K  +    +NTA++L +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            GIRVN +SP  V++         ++ 
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEET 208

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  173 bits (440), Expect = 1e-54
 Identities = 105/206 (50%), Positives = 143/206 (69%), Gaps = 5/206 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RLQ KVA+ITGGAG IGE  A+LF ++GAKV+IADI DD G+ VC +I S     +  S+
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS----PDVISF 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           VHCDVTK++D+ N V+T ++++GKLDIMF N G++     +IL+    +F+R++ +N+ G
Sbjct: 59  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 118

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYTSSKHGVVGLMKNTAVELGRF 188
           AFL  KHAARVM PA +GSI+ TAS+     G   SH YT++KH V+GL  +   ELG +
Sbjct: 119 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 178

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
           GIRVNCVSPY V+SP+      +D  
Sbjct: 179 GIRVNCVSPYIVASPLLTDVFGVDSS 204

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  171 bits (434), Expect = 4e-54
 Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 9/205 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R  GKV ++TGG   IG    R F   GA+V+I D  +  G ++ +++        G  +
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-------PGAVF 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           + CDVT+E D++  V+  + ++G+LD + NNAG     +    +     F ++L +NL+G
Sbjct: 56  ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLG 114

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            +  TK A   ++   +G++I+ +S+ G IG   +  Y ++K  V  + K  A++   +G
Sbjct: 115 TYTLTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYG 173

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           +RVNC+SP  + +P+ +    L  D
Sbjct: 174 VRVNCISPGNIWTPLWEELAALMPD 198

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  169 bits (430), Expect = 2e-53
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCS 68
           RL+ K+A+ITGGA  IG   A  F+  GA + IAD+      E+   ++           
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR------VL 55

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V CDV++  D+E      +S +G+ DI+ NNAGI         +    ++++   +N+ 
Sbjct: 56  TVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI--PFDELTFEQWKKTFEINVD 113

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
             FL  K     MK  G G II+  S    +       Y S+K   +G  +  A +LG+ 
Sbjct: 114 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD 173

Query: 189 GIRVNCVSPYAVSSPMAKGF 208
           GI VN ++P  V +   +  
Sbjct: 174 GITVNAIAPSLVRTATTEAS 193

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  170 bits (431), Expect = 2e-53
 Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 2/207 (0%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           PR   K  +ITG +  IG   A LF++ GA V I     +  E   + I  S  S    +
Sbjct: 1   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 60

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV--DEAKPNILDNDQAEFERILSVN 126
            V  DVT E   +  +N+ + Q+GK+D++ NNAG    D       D     + + L +N
Sbjct: 61  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 120

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L      TK     +  +    +  ++ V G         Y  +K  +    ++TA++L 
Sbjct: 121 LQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 180

Query: 187 RFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           +FGIRVN VSP  V +         D 
Sbjct: 181 KFGIRVNSVSPGMVETGFTNAMGMPDQ 207

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 6e-53
 Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 9/211 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R + ++AL+TG +G IG   AR   + G KV+         E +  +  S+         
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT-LIP 65

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             CD++ E+DI +  +   SQ+  +DI  NNAG+       +L    + ++ + +VN++ 
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLA 123

Query: 130 AFLGTKHAARVMKPAG--RGSIISTASVCG--VIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
             + T+ A + MK      G II+  S+ G  V+    +H Y+++K+ V  L +    EL
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQEL 183

Query: 186 --GRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
              +  IR  C+SP  V +  A      D +
Sbjct: 184 REAQTHIRATCISPGVVETQFAFKLHDKDPE 214

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  161 bits (409), Expect = 5e-50
 Identities = 53/199 (26%), Positives = 90/199 (45%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R  GK  +ITG +  IG  AA +F+K GA+V I    +D  E   + I  +   A   + 
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DVT+    ++ +NT ++++GK+DI+ NNAG          D     +++   +N   
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
               T+     +       +  ++ V G         Y  +K  +    + TA++L + G
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           +RVN VSP AV++      
Sbjct: 181 VRVNSVSPGAVATGFMGAM 199

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  157 bits (398), Expect = 1e-48
 Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 9/209 (4%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           S RL GKVA+ITGG   IG   A  F + GAKV+I     D+GE   + +     + +  
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQI 56

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            +   D + E       +     +G +  + NNAGI      ++ +   AE+ ++L+VNL
Sbjct: 57  QFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNL 114

Query: 128 VGAFLGTKHAARVMKPAGRGS-IISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE-- 184
            G F GT+   + MK  G G+ II+ +S+ G +G  +  AY +SK  V  + K+ A++  
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
           L  + +RVN V P  + +P+       ++
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLPGAEE 203

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  157 bits (398), Expect = 1e-48
 Identities = 63/203 (31%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RLQGKVAL+TGGA  +G    +L    GAKV  +DI +  G+ +  ++           +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER------SMF 56

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV+ E D    +     + G L+++ NNAGI+      +      +F R+L +N   
Sbjct: 57  VRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD--METGRLEDFSRLLKINTES 114

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR-- 187
            F+G +     MK  G GSII+ ASV   +       Y++SK  V  L +  A+   +  
Sbjct: 115 VFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173

Query: 188 FGIRVNCVSPYAVSSPMAKGFLK 210
           + IRVN + P  + +PM +  L 
Sbjct: 174 YAIRVNSIHPDGIYTPMMQASLP 196

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  157 bits (397), Expect = 6e-48
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 10/207 (4%)

Query: 8   SP-RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-----GESVCEDISSSS 61
           SP R  G+V L+TG  G +G   A  F++ GA V++ D+  D      G S  + +    
Sbjct: 1   SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI 60

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
                      +    +  E  V TA+  +G++D++ NNAGI+ +   +       +++ 
Sbjct: 61  RRR--GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDI 116

Query: 122 ILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT 181
           I  V+L G+F  T+ A   MK    G II TAS  G+ G      Y+++K G++GL    
Sbjct: 117 IQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTL 176

Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGF 208
            +E  +  I  N ++P A S       
Sbjct: 177 VIEGRKNNIHCNTIAPNAGSRMTETVM 203

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 6e-48
 Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 8/201 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            + G++ LITG    IG   A  F+K  +K+++ DI     E          +       
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKV---HT 60

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D +  +DI ++     ++ G + I+ NNAG+V  +          + E+   VN++ 
Sbjct: 61  FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF--ATQDPQIEKTFEVNVLA 118

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF- 188
            F  TK     M     G I++ AS  G +      AY SSK   VG  K    EL    
Sbjct: 119 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 178

Query: 189 --GIRVNCVSPYAVSSPMAKG 207
             G++  C+ P  V++   K 
Sbjct: 179 ITGVKTTCLCPNFVNTGFIKN 199

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  155 bits (393), Expect = 9e-48
 Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 6/204 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+G  AL+TGG+  IG       +  GA V                  S           
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEAS 62

Query: 71  HCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            CD++   + +  +NT  + + GKL+I+ NNAGIV   +    D    ++  I+S+N   
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE--AKDYTVEDYSLIMSINFEA 120

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           A+  +  A   +K + RG+++  +SV G +       Y ++K  +  L +  A E  +  
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 180

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDD 213
           IRVN V P  +++ + +  ++  +
Sbjct: 181 IRVNGVGPGVIATSLVEMTIQDPE 204

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  152 bits (385), Expect = 1e-46
 Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 8/196 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L GK  +ITGGA  +G  AAR     GA+V++AD+ D+ G +   ++  +        Y 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA------ARYQ 56

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
           H DVT E+D +  V  A  ++G +D + NNAGI           ++  F +++ +NL G 
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER--FRKVVEINLTGV 114

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F+G K     MK AG GSI++ +S  G++G   + +Y +SK GV GL K  AVELG   I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174

Query: 191 RVNCVSPYAVSSPMAK 206
           RVN V P    +PM  
Sbjct: 175 RVNSVHPGMTYTPMTA 190

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  152 bits (384), Expect = 2e-46
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 6/200 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+ K  L+TGG   IG      F+  GA +      +                    +  
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQV---TGS 62

Query: 71  HCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            CD +   + E  + T  S + GKLDI+ NN G +       LD    +F   +S NL  
Sbjct: 63  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP--TLDYTAEDFSFHISTNLES 120

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           A+  ++ A  ++K +G G+II  +S+ GV+       Y+++K  +  L +N A E    G
Sbjct: 121 AYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDG 180

Query: 190 IRVNCVSPYAVSSPMAKGFL 209
           IR N V+P  +++P+A+   
Sbjct: 181 IRANAVAPAVIATPLAEAVY 200

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 9e-46
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 16/206 (7%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKVAL+TG A  IG   A      GAKV + D   + G      +           ++ C
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK-TLFIQC 61

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DV  ++ + +     V  +G+LDI+ NNAG+ +E            +E+ L +NLV    
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQINLVSVIS 111

Query: 133 GTKHAARVMKPAG---RGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNT--AVELGR 187
           GT      M        G II+ +S+ G++       Y +SKHG+VG  ++   A  L  
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 171

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDD 213
            G+R+N + P  V++ + +   K ++
Sbjct: 172 SGVRLNAICPGFVNTAILESIEKEEN 197

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  146 bits (370), Expect = 2e-44
 Identities = 41/208 (19%), Positives = 72/208 (34%), Gaps = 16/208 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            L  K  +     G IG   +R   K   K  +   + +   ++ E  + +       ++
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKV--NITF 59

Query: 70  VHCDVT-KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
              DVT    + +  +     Q   +DI+ N AGI+D+           + ER +++N  
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH----------QIERTIAINFT 109

Query: 129 GAFLGTKHAARVMK---PAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           G    T               G I +  SV G         Y++SK  VV    + A   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
              G+    ++P    +P+   F    D
Sbjct: 170 PITGVTAYSINPGITRTPLVHTFNSWLD 197

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 4e-44
 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 5/210 (2%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
               LQG+VA++TGGA  IG+   +   + G+ V+IA  K +  +S  +++ ++      
Sbjct: 6   APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ 65

Query: 67  --CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                + C++  E+++ N V + +  +GK++ + NN G    +    + +    +  +L 
Sbjct: 66  ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG--WHAVLE 123

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
            NL G F   K           GSI++          +  H+   ++ GV  L K+ A+E
Sbjct: 124 TNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGA-ARAGVYNLTKSLALE 182

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
               GIR+NCV+P  + S  A         
Sbjct: 183 WACSGIRINCVAPGVIYSQTAVENYGSWGQ 212

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  145 bits (366), Expect = 9e-44
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
           M  ++++  RL GK A+ITG    IG+  A  F+  GA V+++DI  D    V ++I   
Sbjct: 1   MFNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL 58

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
              A       CD+T E+++    + A+S+ GK+DI+ NNAG      P   D   A+F 
Sbjct: 59  GGQA---FACRCDITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFR 112

Query: 121 RILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           R   +N+   F  ++  A  M+  G G I++  S+      +   +Y SSK     L++N
Sbjct: 113 RAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRN 172

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFL 209
            A +LG   IRVN ++P A+ +   K  +
Sbjct: 173 MAFDLGEKNIRVNGIAPGAILTDALKSVI 201

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  143 bits (363), Expect = 2e-43
 Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 5/196 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
             + KVAL+TG    IG   A++ +K  + V+         +SV ++I S    +   S 
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES---SG 63

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DV+K+++I   +N  ++++  +DI+ NNAGI  +     + ND+  +E +L  NL  
Sbjct: 64  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDE--WEDVLRTNLNS 121

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F  T+  ++ M     G II+ +S+ G+ G V    Y+SSK GV+G  K+ A EL    
Sbjct: 122 LFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRN 181

Query: 190 IRVNCVSPYAVSSPMA 205
           I VN ++P  +SS M 
Sbjct: 182 ITVNAIAPGFISSDMT 197

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  143 bits (362), Expect = 2e-43
 Identities = 67/199 (33%), Positives = 99/199 (49%), Gaps = 11/199 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL+ K  LITG A  IG     LF+K GA+++  DI++       E +        G   
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHP 53

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV     +E     A++  G+LD + + AGI  +           ++E +L VNL G
Sbjct: 54  VVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDWELVLRVNLTG 111

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           +FL  K A+  M+    GSI+ TAS    +G +    Y +S  GVVGL +  A+ELGR+G
Sbjct: 112 SFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWG 170

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           IRVN ++P  + + M    
Sbjct: 171 IRVNTLAPGFIETRMTAKV 189

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  143 bits (361), Expect = 8e-43
 Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           +L+G+  LITGGA  +G      F   GAKV + D   +    +  D   +         
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN------VLG 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP---NILDNDQAEFERILSVN 126
           +  DV   +D + A +  V+++GK+D +  NAGI D +        ++  A F+ +  +N
Sbjct: 56  IVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHIN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           + G     K     +  A RG++I T S  G         YT++KH +VGL++  A EL 
Sbjct: 116 VKGYIHAVKACLPALV-ASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA 174

Query: 187 RFGIRVNCVSPYAVSSPM 204
            + +RVN V    ++S +
Sbjct: 175 PY-VRVNGVGSGGINSDL 191

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 2e-42
 Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 14/205 (6%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANG 66
           M   L G+  L+TG    IG    +     GA+V+         +S+  +         G
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-------PG 53

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              V  D+   +  E A+       G +D++ NNA +        L+  +  F+R   VN
Sbjct: 54  IEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQ--PFLEVTKEAFDRSFEVN 107

Query: 127 LVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVEL 185
           L      ++  AR +   G   +I++ +S C          Y S+K  +  L K  A+EL
Sbjct: 108 LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALEL 167

Query: 186 GRFGIRVNCVSPYAVSSPMAKGFLK 210
           G   IRVN V+P  V + M +    
Sbjct: 168 GPHKIRVNAVNPTVVMTSMGQATWS 192

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  140 bits (355), Expect = 2e-42
 Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 14/205 (6%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
              G  AL+TG    IG    +     GAKV+     +    S+ ++         G   
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-------PGIEP 54

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  D+      E A+       G +D++ NNA +V       L+  +  F+R  SVNL  
Sbjct: 55  VCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQ--PFLEVTKEAFDRSFSVNLRS 108

Query: 130 AFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
            F  ++  AR M      GSI++ +S+   +       Y+S+K  +  L K  A+ELG  
Sbjct: 109 VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPH 168

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDD 213
            IRVN V+P  V + M K      +
Sbjct: 169 KIRVNSVNPTVVLTDMGKKVSADPE 193

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  139 bits (352), Expect = 1e-41
 Identities = 45/213 (21%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 6   SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN 65
             +     K  ++TGG   IG    R  +  GA V +          V E +        
Sbjct: 2   GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK- 60

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
                 CDV+    +   +    +  G +  +  NAG+         +    +F  +  V
Sbjct: 61  -TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV--VKPATELTHEDFAFVYDV 117

Query: 126 NLVGAFLGTKHAARVMKPAGRGSII--------STASVCGVIGGVTSHAYTSSKHGVVGL 177
           N+ G F   +  A++     +   I           +   + G +T   Y SSK     L
Sbjct: 118 NVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNL 177

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK 210
           +K  A E    GIRVN +SP  V++       K
Sbjct: 178 VKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK 210

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  138 bits (349), Expect = 3e-41
 Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 2/205 (0%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           R   +V LITGG   +G   A   +  GAK+ + D+  +  E+    +  ++  A     
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE-VLT 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DV+ E  +E  V     ++G++D  FNNAGI  +  P       AEF++++S+NL G
Sbjct: 60  TVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT-ESFTAAEFDKVVSINLRG 118

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            FLG +   ++M+  G G +++TASV G+ G      Y ++KHGVVGL +N+AVE GR+G
Sbjct: 119 VFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYG 178

Query: 190 IRVNCVSPYAVSSPMAKGFLKLDDD 214
           IR+N ++P A+ +PM +  +K  D 
Sbjct: 179 IRINAIAPGAIWTPMVENSMKQLDP 203

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  138 bits (349), Expect = 4e-41
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 9/209 (4%)

Query: 4   ANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSS 62
               S  L+GKVAL+TG    IG   A    + G KV++      +  E V   I  + S
Sbjct: 9   LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS 68

Query: 63  SANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERI 122
            A   + V  +V   +DI      AV  +GKLDI+ +N+G+V     ++ D    EF+R+
Sbjct: 69  DA---ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRV 123

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNT 181
            ++N  G F   + A + ++  GR  ++ + +  G    V  HA  S SK  +    +  
Sbjct: 124 FTINTRGQFFVAREAYKHLEIGGRLILMGSIT--GQAKAVPKHAVYSGSKGAIETFARCM 181

Query: 182 AVELGRFGIRVNCVSPYAVSSPMAKGFLK 210
           A+++    I VN V+P  + + M     +
Sbjct: 182 AIDMADKKITVNVVAPGGIKTDMYHAVCR 210

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  137 bits (347), Expect = 5e-41
 Identities = 87/201 (43%), Positives = 121/201 (60%), Gaps = 8/201 (3%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
           S RL GKVAL++GGA  +G    R     GAKV+  DI D+ G+++  ++      A+  
Sbjct: 1   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL------ADAA 54

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
            YVH DVT+    + AV+TAV+ +G L ++ NNAGI++       D    E++RIL VNL
Sbjct: 55  RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI--EDYALTEWQRILDVNL 112

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
            G FLG +   + MK AGRGSII+ +S+ G+ G V  H YT++K  V GL K+TA+ELG 
Sbjct: 113 TGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGP 172

Query: 188 FGIRVNCVSPYAVSSPMAKGF 208
            GIRVN + P  V +PM    
Sbjct: 173 SGIRVNSIHPGLVKTPMTDWV 193

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  136 bits (343), Expect = 2e-40
 Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 9/199 (4%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANG 66
           S  L GKVAL TG    IG   A    + GA V++         E V  ++    +    
Sbjct: 1   SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG-- 58

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  D++K  ++    + AVS +G LD + +N+G+      + L+  Q  F+++ ++N
Sbjct: 59  -VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWC--DELEVTQELFDKVFNLN 115

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS-SKHGVVGLMKNTAVEL 185
             G F   +   +  +  GR  + S+ +   V+ G+ +HA  + SK  V G  +  AV+ 
Sbjct: 116 TRGQFFVAQQGLKHCRRGGRIILTSSIA--AVMTGIPNHALYAGSKAAVEGFCRAFAVDC 173

Query: 186 GRFGIRVNCVSPYAVSSPM 204
           G  G+ VNC++P  V + M
Sbjct: 174 GAKGVTVNCIAPGGVKTDM 192

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 3e-40
 Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 7/199 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            LQGK  ++TG +  IG   A   +K GA V++     +  + V          A    Y
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC--LELGAASAHY 68

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +   +      E  V  A    G LD++  N         N+  +D     + + VN + 
Sbjct: 69  IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFLS 126

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG--R 187
             + T  A  ++K    GSI+  +S+ G +      AY++SK  + G   +   E    R
Sbjct: 127 YVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 185

Query: 188 FGIRVNCVSPYAVSSPMAK 206
             + +       + +  A 
Sbjct: 186 VNVSITLCVLGLIDTETAM 204

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  135 bits (342), Expect = 3e-40
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 16  ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT 75
           A++T      G  +A   S+ G  V   D      + +          A   +Y      
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL---------EAFAETYPQLKPM 53

Query: 76  KEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK 135
            E++    +    S YG++D++ +N     E +P I      ++   +    +  F    
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFALVN 112

Query: 136 HAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
             A  MK    G II   S            YTS++ G   L    + ELG + I V  +
Sbjct: 113 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 172

Query: 196 SPYAVSSPMAKGFLKLD 212
            P  + S  +  F   +
Sbjct: 173 GPNYLHSEDSPYFYPTE 189

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  136 bits (342), Expect = 4e-40
 Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 4/197 (2%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           +  GKV L+TG  G+IG   A   ++ G  + + D+  +  E     +      A     
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEA---RS 58

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
             CDVT E+ +   V++ V  +GK+D +FNNAG      P   D    +F R+L++N+ G
Sbjct: 59  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQ-DYPSDDFARVLTINVTG 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           AF   K  +R M     G I++TAS+ GV G     AY +SK  ++ L +  A++L  + 
Sbjct: 118 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 177

Query: 190 IRVNCVSPYAVSSPMAK 206
           IRVN +SP  +      
Sbjct: 178 IRVNAISPGYMGPGFMW 194

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  135 bits (341), Expect = 5e-40
 Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 6/200 (3%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+G  AL+TGG+  IG       +  GA+V      +   +   E               
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---GLNVEGS 60

Query: 71  HCDVTKEKDIENAVNTAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
            CD+    + +  + T    + GKL+I+ NNA           D  + ++  I+  N   
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNA--GVVIHKEAKDFTEKDYNIIMGTNFEA 118

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           A+  ++ A  ++K +  G++I  +S+ G     +   Y++SK  +  + K+ A E  +  
Sbjct: 119 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 178

Query: 190 IRVNCVSPYAVSSPMAKGFL 209
           IRVN V+P  + +P+ +  +
Sbjct: 179 IRVNSVAPGVILTPLVETAI 198

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  133 bits (335), Expect = 3e-39
 Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 11/199 (5%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK  L+TG A  IG  A  LF++ GA ++  D ++ L       + +          
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE------AIA 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           V  DV+  K +E     A+ ++G+L  + + AG+   A    L  +   +E++L VNL G
Sbjct: 56  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE--AWEKVLRVNLTG 113

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           +FL  + A  V++  G   +  + +  G  G      Y + K GVVGL +  A+EL R G
Sbjct: 114 SFLVARKAGEVLEEGGSLVLTGSVAGLGAFG---LAHYAAGKLGVVGLARTLALELARKG 170

Query: 190 IRVNCVSPYAVSSPMAKGF 208
           +RVN + P  + +PM  G 
Sbjct: 171 VRVNVLLPGLIQTPMTAGL 189

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  134 bits (338), Expect = 3e-39
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 7/214 (3%)

Query: 4   ANSMSP--RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS 61
             +M P    QGKVA ITGG   +G+    L S  GA+ +IA  K D+ ++  E ISS +
Sbjct: 14  QKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73

Query: 62  SSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFER 121
            +      + CDV     ++N V+  +   G  +I+ NNA     +    L  +   ++ 
Sbjct: 74  GNK--VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN--AWKT 129

Query: 122 ILSVNLVGAF-LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKN 180
           I  + L G   +  +   +++K     + +S  ++    G        S+K GV  + K+
Sbjct: 130 ITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKS 189

Query: 181 TAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            A E G++G+R N + P  + +  A   L     
Sbjct: 190 LAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT 223

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  131 bits (331), Expect = 8e-39
 Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 8/198 (4%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
            +GK+AL+TG +  IG   A   +  GAKV+     ++  +++ + + ++         +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN------GKGL 55

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             +VT    IE+ +    +++G++DI+ NNAGI  +           E+  I+  NL   
Sbjct: 56  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLM--RMKDEEWNDIIETNLSSV 113

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
           F  +K   R M     G II+  SV G +G      Y ++K G++G  K+ A E+   GI
Sbjct: 114 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGI 173

Query: 191 RVNCVSPYAVSSPMAKGF 208
            VN V+P  + + M +  
Sbjct: 174 TVNVVAPGFIETDMTRAL 191

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 1e-38
 Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 15/202 (7%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GKV ++T  A  IG+ AA  F++ GAKV+  DI +   + + +          G   
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP--------GIQT 54

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DVTK+K I+   N    +  +LD++FN AG V      +LD ++ +++  +++N+  
Sbjct: 55  RVLDVTKKKQIDQFAN----EVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRS 108

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-AYTSSKHGVVGLMKNTAVELGRF 188
            +L  K     M     G+II+ +SV   + GV +   Y+++K  V+GL K+ A +  + 
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ 168

Query: 189 GIRVNCVSPYAVSSPMAKGFLK 210
           GIR NCV P  V +P  +  ++
Sbjct: 169 GIRCNCVCPGTVDTPSLQERIQ 190

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  131 bits (330), Expect = 2e-38
 Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 5/201 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           L+G+VAL+TGG+  +G   A+  ++ G  V++A    +      + ++            
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE--TMAF 60

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CDV+  ++++  +     ++GKLD + N AGI         +    EF +++ VNL G 
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGT 118

Query: 131 F-LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
           + +  +  + + +      I   +     +      AY +SK GV  L K  A E GR+G
Sbjct: 119 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 178

Query: 190 IRVNCVSPYAVSSPMAKGFLK 210
           IRVN ++P    + M +    
Sbjct: 179 IRVNVIAPGWYRTKMTEAVFS 199

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  130 bits (329), Expect = 2e-38
 Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 7/204 (3%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            +VAL+TG    IG   AR   K G +V +    ++   +  +++  +   A+G     C
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADG---RTC 58

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DV    +IE  V   V +YG +D++ NNAG          +     +  ++  NL G F 
Sbjct: 59  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA--TAELADELWLDVVETNLTGVFR 116

Query: 133 GTKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
            TK   +   M   G G I++ AS  G  G V +  Y++SKHGVVG  K   +EL R GI
Sbjct: 117 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 176

Query: 191 RVNCVSPYAVSSPMAKGFLKLDDD 214
            VN V P  V +PMA    +   D
Sbjct: 177 TVNAVCPGFVETPMAASVREHYSD 200

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  129 bits (326), Expect = 5e-38
 Identities = 45/202 (22%), Positives = 80/202 (39%), Gaps = 12/202 (5%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAK-------VLIADIKDDLGESVCEDISSSSSSANG 66
            + LITG    IG   A  F++           ++++       E +  +  +  +    
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALT-- 59

Query: 67  CSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVN 126
              +  D++   D+       V +YG +D + NNAG+       + D  + +F+  ++ N
Sbjct: 60  -DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA--LSDLTEEDFDYTMNTN 116

Query: 127 LVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
           L G F  T+    +M+    G I    SV        S  Y  SK G  GL++   +   
Sbjct: 117 LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 176

Query: 187 RFGIRVNCVSPYAVSSPMAKGF 208
           +  +R+  V P AV +PM    
Sbjct: 177 KCNVRITDVQPGAVYTPMWGKV 198

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  128 bits (322), Expect = 2e-37
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 6/196 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHC 72
            V ++TG +  IG+  A    K G KVL+   +     E V + I +    A        
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA---ITFGG 58

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           DV+KE D+E  + TA+  +G +D++ NN          ++   +++++ ++ +NL G FL
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNN--AGITRDTLLIRMKKSQWDEVIDLNLTGVFL 116

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
            T+ A ++M    +G II+ ASV G+IG +    Y ++K GV+G  K  A E     I V
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176

Query: 193 NCVSPYAVSSPMAKGF 208
           N V P  ++S M    
Sbjct: 177 NVVCPGFIASDMTAKL 192

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  125 bits (314), Expect = 5e-36
 Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSAN 65
           M   L+GKV +ITG +  +G+  A  F+   AKV++    K+D   SV E+I      A 
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEA- 59

Query: 66  GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSV 125
               V  DVT E D+ N V +A+ ++GKLD+M NNAG+ +       +   +++ +++  
Sbjct: 60  --IAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS--HEMSLSDWNKVIDT 115

Query: 126 NLVGAFLGTKHAAR-VMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           NL GAFLG++ A +  ++   +G++I+ +SV   I       Y +SK G+  + +  A+E
Sbjct: 116 NLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALE 175

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
               GIRVN + P A+++P+        +
Sbjct: 176 YAPKGIRVNNIGPGAINTPINAEKFADPE 204

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  121 bits (305), Expect = 8e-35
 Identities = 39/222 (17%), Positives = 67/222 (30%), Gaps = 33/222 (14%)

Query: 7   MSPRLQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSA 64
           MSP       ++TG    IG    +   K      ++      +    +     S     
Sbjct: 1   MSP----GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDS----- 51

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGK--LDIMFNNAGIVDEAKPNILDNDQAEFERI 122
                +   VT +K ++  V+      G   L ++ NNAG++        + ++A     
Sbjct: 52  -RVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGT-NTEPNRAVIAEQ 109

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC------------------GVIGGVTS 164
           L VN     L T+    ++K A         SV                           
Sbjct: 110 LDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPV 169

Query: 165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK 206
            AY  SK  +    +  AV+L    + V    P  V + +  
Sbjct: 170 LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG 211

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  121 bits (304), Expect = 8e-35
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 16/200 (8%)

Query: 9   PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCS 68
           P    +  L+TGG   IG   A+  +  G KV +        +              G  
Sbjct: 3   PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLF 48

Query: 69  YVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
            V  DVT    ++ A        G ++++ +NAG+  +A   ++   + +FE++++ NL 
Sbjct: 49  GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLT 106

Query: 129 GAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
           GAF   + A+R M+    G +I   SV G+ G      Y +SK GV+G+ ++ A EL + 
Sbjct: 107 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKA 166

Query: 189 GIRVNCVSPYAVSSPMAKGF 208
            +  N V+P  + + M +  
Sbjct: 167 NVTANVVAPGYIDTDMTRAL 186

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  120 bits (303), Expect = 1e-34
 Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 20/199 (10%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           ++ K  L+   +  IG   A + S+ GA+V I    ++L +             +G  YV
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK------------RSGHRYV 49

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
            CD+ K+      ++    +  ++DI+  NAG       + L N+  +F+  +    +  
Sbjct: 50  VCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNE--DFKEAIDSLFLNM 101

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
               ++    MK  G G I++  S   +      +   S++  + G +K  + E+  +GI
Sbjct: 102 IKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGI 161

Query: 191 RVNCVSPYAVSSPMAKGFL 209
            VNCV+P    +   K  L
Sbjct: 162 TVNCVAPGWTETERVKELL 180

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  121 bits (304), Expect = 2e-34
 Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 5/201 (2%)

Query: 11  LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSY 69
           L+GKVA++TG    IG   A   +  GA +++    D    E V   +++         Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK--VLY 59

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              D++K + +   V+ AV Q G++DI+ NNAGI   A   I D    +++ IL++NL  
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEKWDAILALNLSA 117

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG 189
            F GT  A   MK  G G II+ AS  G++      AY ++KHGVVG  K TA+E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 190 IRVNCVSPYAVSSPMAKGFLK 210
           I  N + P  V +P+ +  + 
Sbjct: 178 ITANAICPGWVRTPLVEKQIS 198

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  120 bits (302), Expect = 2e-34
 Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 9/206 (4%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
           RL GK ALITG A  IG   A  + + GA+V IADI  +   +   +I  +         
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA------ACA 55

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
           +  DVT +  I+  V   + ++G +DI+ NNA + D A    +  +   ++R+ ++N+ G
Sbjct: 56  IALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRE--SYDRLFAINVSG 113

Query: 130 AFLGTKHAARVMKPAGRGSIIS-TASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRF 188
                +  AR M   GRG  I   AS  G  G      Y ++K  V+ L ++  + L R 
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRH 173

Query: 189 GIRVNCVSPYAVSSPMAKGFLKLDDD 214
           GI VN ++P  V      G      D
Sbjct: 174 GINVNAIAPGVVDGEHWDGVDAKFAD 199

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  117 bits (294), Expect = 3e-33
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 22/202 (10%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           + AL+TGGA  +G  AA      G +V++ D++ +  + +               YV  D
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI---------------YVEGD 46

Query: 74  VTKEKDIENAVNTAVSQY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           VT+E+D+  AV  A  +      +     G+ ++       +    F R+L VNL+G F 
Sbjct: 47  VTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFN 106

Query: 133 GTKHAARV------MKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG 186
             + AA             RG I++TASV    G +   AY +SK GVV L    A EL 
Sbjct: 107 VLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA 166

Query: 187 RFGIRVNCVSPYAVSSPMAKGF 208
            +GIRV  V+P    +P+ +G 
Sbjct: 167 GWGIRVVTVAPGLFDTPLLQGL 188

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 4e-33
 Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 7/204 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADI---KDDLGESVCEDISSSSSSANGCSYV 70
            V LITG +  IG   A   +   ++                + E   + +        +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
             DV   K +  A          + +     G++   +    D   +  +     N+VG 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDV----NVVGT 118

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGI 190
               +     MK  G G ++ T SV G++G   +  Y +SK  + GL ++ AV L  FG+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 191 RVNCVSPYAVSSPMAKGFLKLDDD 214
            ++ +    V +   +  L   ++
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEE 202

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 5e-33
 Identities = 46/238 (19%), Positives = 78/238 (32%), Gaps = 53/238 (22%)

Query: 14  KVALITGGAGSIGECAARLFSK-HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
            VAL+TGG   IG    R   +     V++       G++  + + +   S     +   
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSP---RFHQL 60

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           D+   + I    +    +YG LD++ NNAGI  +           + E  +  N  G   
Sbjct: 61  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVTMKTNFFGTRD 118

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIG-------------------------------- 160
                  ++K   +G +++ +S+  V                                  
Sbjct: 119 VCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 161 ---------GVTSHAYTSSKHGVVGLMKNTAVELGR----FGIRVNCVSPYAVSSPMA 205
                    G  S AY  +K GV  L +  A +L        I +N   P  V + MA
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 234

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  115 bits (289), Expect = 2e-32
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 13/217 (5%)

Query: 8   SPRLQGKVALITGGAGSIGECAARLFSK---HGAKVLIADIKDDLGESVCEDISSSSSSA 64
           +  L   V ++TG +   G   A   ++    G+ +L++   + +   + E++ +     
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 65  NGCSYVHCDVTKEKDIENAVNT----AVSQYGKLDIMFNNAGIVDEAKP-NILDNDQAEF 119
                   D+  E  ++  ++        +  +  ++ NNA  + +     +  ND AE 
Sbjct: 61  K-VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV 119

Query: 120 ERILSVNLVGAFLGTKHAARVM--KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGL 177
               ++NL      T          P    ++++ +S+C +        Y + K     L
Sbjct: 120 NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDML 179

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            +  A E     +RV   +P  + + M +   +   D
Sbjct: 180 YQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKD 214

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  114 bits (286), Expect = 6e-32
 Identities = 57/202 (28%), Positives = 83/202 (41%), Gaps = 6/202 (2%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           KVAL+TG    IG+  A    K G  V IAD  D   ++V  +I+ +   A     V  D
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA---VAVKVD 58

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF-L 132
           V+    +  AV  A    G  D++ NNAG+                +++ ++N+ G    
Sbjct: 59  VSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI--ESITPEIVDKVYNINVKGVIWG 116

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
                    K    G II+  S  G +G      Y+SSK  V GL +  A +L   GI V
Sbjct: 117 IQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 176

Query: 193 NCVSPYAVSSPMAKGFLKLDDD 214
           N   P  V +PM     +   +
Sbjct: 177 NGYCPGIVKTPMWAEIDRQVSE 198

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (282), Expect = 2e-31
 Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 8/205 (3%)

Query: 10  RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSY 69
            ++G VA+ITGGA  +G   A      GA  ++ D+ +  GE+  + + ++   A     
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 70  VHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              DV     +       V        +   +   +  K      +   F+R+L VNL+G
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVLDVNLMG 119

Query: 130 AFLGTKHAARVMKPA------GRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAV 183
            F   +  A  M          RG II+TASV    G V   AY++SK G+VG+    A 
Sbjct: 120 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 179

Query: 184 ELGRFGIRVNCVSPYAVSSPMAKGF 208
           +L   GIRV  ++P    +P+    
Sbjct: 180 DLAPIGIRVMTIAPGLFGTPLLTSL 204

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  111 bits (279), Expect = 6e-31
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 10/202 (4%)

Query: 7   MSPRLQGKVALITGGAGS--IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           ++  L GK AL+ G      +G   A    + GA+V ++   + L     +   +     
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL---- 57

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP--NILDNDQAEFERI 122
            G      DVT++++++         +G LD + +              +D  + ++   
Sbjct: 58  GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTA 182
           L V+        + A  +++    G I++             +    +K  +   ++  A
Sbjct: 118 LEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLA 175

Query: 183 VELGRFGIRVNCVSPYAVSSPM 204
            ELG  G+RVN +S   V +  
Sbjct: 176 YELGPKGVRVNAISAGPVRTVA 197

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  107 bits (267), Expect = 5e-29
 Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 17/208 (8%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSS--SSANGCSYVH 71
            A+ITGGA  IG   A    + G +V++     +   + +  +++++   S+      + 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE---------RI 122
              +     E+ ++ +   +G+ D++ NNA           D+     +          +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 123 LSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH-----AYTSSKHGVVGL 177
              N V      +  AR     G     + + V                YT +KH + GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 178 MKNTAVELGRFGIRVNCVSPYAVSSPMA 205
            +  A+EL    IRVN V+P     P A
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPA 210

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  104 bits (259), Expect = 4e-28
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 20/206 (9%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
           + +  L+ GG G++G    + F      V   D+ ++               A+    V 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------------EEASASVIVK 47

Query: 72  CDVTKEKDIENAVNTAVSQYG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVG 129
              +  +  +          G  K+D +   AG           +     + +   ++  
Sbjct: 48  MTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWT 106

Query: 130 AFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELG--R 187
           + + +  A + +K  G  ++    +   + G      Y  +K  V  L ++ A +     
Sbjct: 107 STISSHLATKHLKEGGLLTLAG--AKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMP 164

Query: 188 FGIRVNCVSPYAVSSPMAKGFLKLDD 213
            G     V P  + +PM +  +   D
Sbjct: 165 SGAAAIAVLPVTLDTPMNRKSMPEAD 190

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 95.0 bits (235), Expect = 2e-24
 Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 11/200 (5%)

Query: 10  RLQGKVALITGGAGS--IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
            L GK  L+TG A    I    A+   + GA++      D L   V E  +         
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL----GSD 57

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKP---NILDNDQAEFERILS 124
             + CDV ++  I+         + K D   ++ G     +     +    +  F+    
Sbjct: 58  IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHD 117

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
           ++        K    ++ P    ++++ + +         +    +K  +   ++  A  
Sbjct: 118 ISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANA 175

Query: 185 LGRFGIRVNCVSPYAVSSPM 204
           +G  G+RVN +S   + +  
Sbjct: 176 MGPEGVRVNAISAGPIRTLA 195

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 24/220 (10%)

Query: 14  KVALITGGAGSIGECAARLF---SKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
              LITG    +G    +      +    +       +  + + +   + S+       +
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSN----IHIL 58

Query: 71  HCDVTKEKDIEN--AVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLV 128
             D+      +   A    V++   L+++FNNAGI  ++          E    L  N V
Sbjct: 59  EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAV-RSQELLDTLQTNTV 117

Query: 129 GAFLGTKHAARVMKPAGRGSII--------------STASVCGVIGGVTSHAYTSSKHGV 174
              +  K    ++K A + +                S             +AY +SK  +
Sbjct: 118 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSAL 177

Query: 175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
               K+ +V+L    I    + P  V + M      LD  
Sbjct: 178 NAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVP 217

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 90.3 bits (223), Expect = 7e-23
 Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 21/201 (10%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
           GKV ++ GG G++G      F K+G  VL  D+  +               A+    V  
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------------DQADSNILVDG 48

Query: 73  DVTKEKDIENAVNTAVS--QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
           +    +  ++ +    S  Q  ++D +F  AG           +     + ++  ++  +
Sbjct: 49  NKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSS 107

Query: 131 FLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFG- 189
            +  K A   +KP G   +  T +   +    +   Y  +K  V  L  + A +      
Sbjct: 108 AIAAKLATTHLKPGGL--LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD 165

Query: 190 -IRVNCVSPYAVSSPMAKGFL 209
              V  + P  + +PM + ++
Sbjct: 166 NSAVLTIMPVTLDTPMNRKWM 186

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 81.3 bits (199), Expect = 3e-19
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 6/201 (2%)

Query: 10  RLQGKVALITGGAGS--IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC 67
            L+GK  LI G A +  I    A+     GA +    + + L + V       +   N  
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPI----AQELNSP 57

Query: 68  SYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNL 127
                DV+KE+  ++  N+     G LD + ++     +        + ++     ++ +
Sbjct: 58  YVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEI 117

Query: 128 VGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGR 187
               L               S+++ + +         +    +K  +   ++  AV+LG+
Sbjct: 118 SVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGK 177

Query: 188 FGIRVNCVSPYAVSSPMAKGF 208
             IRVN +S   + +  + G 
Sbjct: 178 HHIRVNALSAGPIRTLASSGI 198

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 78.4 bits (192), Expect = 3e-18
 Identities = 36/226 (15%), Positives = 74/226 (32%), Gaps = 58/226 (25%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
            + +I+G A  IG    ++    G +++  DI+D                      V  D
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------------EVIAD 41

Query: 74  VTKEKDIENAVNTAVSQYGK-LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
           ++  +  + A+   +++  K +D +   AG+                  ++SVN  GA  
Sbjct: 42  LSTAEGRKQAIADVLAKCSKGMDGLVLCAGL---------GPQTKVLGNVVSVNYFGATE 92

Query: 133 GTKHAAR---------------------------VMKPAGRGSIISTASVCGVIGGVTSH 165
                                             +      G      ++    G    +
Sbjct: 93  LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 166 -AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK 210
            AY  SK+ +   ++  A   G  G+R+N ++P A  +P+ +  L+
Sbjct: 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ 198

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 72.2 bits (176), Expect = 2e-16
 Identities = 27/187 (14%), Positives = 61/187 (32%), Gaps = 19/187 (10%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
            L   +    ++GK A++  G G +G  +A L +  GA+V++   K D  ++  + ++  
Sbjct: 11  ALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR 70

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFE 120
                  +    +   +     AV            +F    I       +    QA ++
Sbjct: 71  ----FKVNVTAAETADDASRAEAV-------KGAHFVFTAGAI------GLELLPQAAWQ 113

Query: 121 RILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMK 179
              S+ +V  +            A  +G         G +G +        +  +  L +
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFE 172

Query: 180 NTAVELG 186
           ++     
Sbjct: 173 SSEGVFD 179

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 73.5 bits (179), Expect = 2e-16
 Identities = 36/215 (16%), Positives = 65/215 (30%), Gaps = 34/215 (15%)

Query: 15  VALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSA--------- 64
           VAL+TG A  +G   A      G  V +   +      ++   +++   ++         
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 65  ------NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIV------------DE 106
                    +     VT        V    + +G+ D++ NNA                E
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 107 AKPNILDNDQAEFERILSVNLVGAFLGT------KHAARVMKPAGRGSIISTASVCGVIG 160
                 +  +     +   N +  +                      SII+         
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCV 195
            +    YT +K  + GL ++ A+EL    IRVN V
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGV 218

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 73.4 bits (178), Expect = 5e-16
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 33/234 (14%)

Query: 12  QGKVALITGGAGS--IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS--------- 60
              +  I G   +   G   A+  SK   K++           +    +           
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 61  --------------------SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNN 100
                                      +    ++ +   IE+  N    +YGK++++ ++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 101 AGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG 160
                E + ++L+  +  +   LS +        K+   +MKP      ++       + 
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTY-HASQKVV 179

Query: 161 GVTSHAYTSSKHGVVGLMKNTAVELGRF-GIRVNCVSPYAVSSPMAKGFLKLDD 213
                  +S+K  +    +  A  LGR   IR+N +S   + S  A    KL++
Sbjct: 180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNN 233

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 72.5 bits (176), Expect = 5e-16
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 6/210 (2%)

Query: 8   SPRLQGKVALITGGAGS--IGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSA 64
           +  L GK  L++G      I    AR+  + GA++++    +  L + + + +    + A
Sbjct: 1   TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKA 57

Query: 65  NGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILS 124
                   +      +   V  A+    KLD + ++ G + +    I     A +  +  
Sbjct: 58  PLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSK 117

Query: 125 VNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVE 184
              + A+     A  ++     G  I              +  T +K  +  + +  A E
Sbjct: 118 GIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVARE 177

Query: 185 LGRFGIRVNCVSPYAVSSPMAKGFLKLDDD 214
            G++G+R N V+   + +      +     
Sbjct: 178 AGKYGVRSNLVAAGPIRTLAMSAIVGGALG 207

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 66.2 bits (160), Expect = 7e-14
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 10/192 (5%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
               L+TGG G +G   AR  ++ GA  L+   +         ++ +   +    + V  
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 73  DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFL 132
               +++    +   +     L  +F+ A  +D     +        ER          L
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLD--DGTVDTLTGERIERASRAK----VL 122

Query: 133 GTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRV 192
           G ++   + +     + +  +S     G      Y      + GL    A +    G+  
Sbjct: 123 GARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPA 178

Query: 193 NCVSPYAVSSPM 204
             V+    +   
Sbjct: 179 TAVAWGTWAGSG 190

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 64.3 bits (155), Expect = 2e-13
 Identities = 21/192 (10%), Positives = 54/192 (28%), Gaps = 6/192 (3%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           +VA + GG G++G+  A   +  G ++++   +++  E+   +    +  A+        
Sbjct: 2   RVA-LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS---ITGMK 57

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
                +  +     +     +D   +   I+ E                           
Sbjct: 58  NEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVP--VSRGAKGFTYSSERSA 115

Query: 134 TKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVN 193
            +  A V++     S + T              +     G     K   + L      + 
Sbjct: 116 AEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLR 175

Query: 194 CVSPYAVSSPMA 205
            +    +S+   
Sbjct: 176 PLDAGPLSNSRL 187

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 54.8 bits (130), Expect = 1e-09
 Identities = 35/238 (14%), Positives = 69/238 (28%), Gaps = 31/238 (13%)

Query: 7   MSPRLQGKVALITGGAGS--IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
           +   L+GK A I G A     G   A+  +  GA++L+      L              +
Sbjct: 2   LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS 61

Query: 65  NGC-----------------------------SYVHCDVTKEKDIENAVNTAVSQYGKLD 95
                                           +      +    ++ A       +G +D
Sbjct: 62  RVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSID 121

Query: 96  IMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASV 155
           I+ ++     E    +L+  +  +   +S +         H   +M P G    ++  + 
Sbjct: 122 ILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIAS 181

Query: 156 CGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKLDD 213
             +I G      ++                 +  IRVN +S   + S  AK    +D 
Sbjct: 182 ERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 49.4 bits (117), Expect = 8e-08
 Identities = 34/185 (18%), Positives = 57/185 (30%), Gaps = 18/185 (9%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           LITGGAG IG    R   K+    ++    D L  +   +  S  S +N  ++ H D+  
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNI--DKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKH 136
             +I            + D + + A          +D         +  N+    +GT  
Sbjct: 62  SAEITRIFEQY-----QPDAVMHLAAESH------VDRSITGPAAFIETNI----VGTYA 106

Query: 137 AARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVS 196
              V +           +        T   Y    H    +  +  + L          S
Sbjct: 107 LLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE-VENSVTLPLFTETTAYAPSS 165

Query: 197 PYAVS 201
           PY+ S
Sbjct: 166 PYSAS 170

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 47.9 bits (112), Expect = 2e-07
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYV 70
           QGK   +TG  G  G   +      GA V        L       +  ++  A+G    
Sbjct: 6  WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKG----YSLTAPTVPSLFETARVADGMQSE 61

Query: 71 HCDVTKEKDI 80
            D+  +  +
Sbjct: 62 IGDIRDQNKL 71

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.8 bits (107), Expect = 1e-06
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
          K+ L+TGGAG IG        ++G   ++AD   +        +   +   +   +   D
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVD 59

Query: 74 VTKEKDIENA 83
          +   K +E  
Sbjct: 60 LCDRKGLEKV 69

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED---ISSSSSSANGCSYV 70
          K+ALITG  G  G          G +V     +     +   +   I   + +       
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 71 HCDVTKEKDIENAVN 85
          + D+T    +   ++
Sbjct: 62 YADLTDASSLRRWID 76

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 15/148 (10%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSAN---GCSYV 70
            VALITG  G  G   A    + G +V     +     +   +    +  A+        
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 71  HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGA 130
           + D+T                 K+        I +    + +       E    V+ VG 
Sbjct: 62  YGDLTDSTC-----------LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGT 110

Query: 131 FLGTKHAARV-MKPAGRGSIISTASVCG 157
                      +  + +    ST+ + G
Sbjct: 111 LRLLDAVKTCGLINSVKFYQASTSELYG 138

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 28/154 (18%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG--ESVCEDISSSSSSANGCSYVH 71
           KVALITG  G  G   A    + G +V     +      E V        +        +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            D++   ++   +     +  + D ++N   +   A            E    V+ +G  
Sbjct: 62  GDLSDTSNLTRIL-----REVQPDEVYNLGAMSHVAVS------FESPEYTADVDAMGTL 110

Query: 132 --------LGTKHAARVMKPAGRGSIISTASVCG 157
                   LG +   R           ST+ + G
Sbjct: 111 RLLEAIRFLGLEKKTRFY-------QASTSELYG 137

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (103), Expect = 5e-06
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 17  LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
           L+TGG+G IG        ++G  V+I D   +   SV   I          ++V  D+  
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRN 61

Query: 77  EKDIENAVNTAVSQYGKLDIMFNNAGIVD 105
           E  +       +     +D + + AG+  
Sbjct: 62  EALMTE-----ILHDHAIDTVIHFAGLKA 85

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.8 bits (101), Expect = 7e-06
 Identities = 16/100 (16%), Positives = 26/100 (26%), Gaps = 14/100 (14%)

Query: 13  GKVALITGGAGSIGECAARLFSKHGAKVLIAD------IKDDLGESVCEDISSSSSSAN- 65
           G   ++ GG G  G   A   SK   +V I D          LG      I+S     + 
Sbjct: 1   GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 66  -------GCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMF 98
                         D+   + +  +  +            
Sbjct: 61  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQ 100

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 43.2 bits (100), Expect = 1e-05
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
          K+ LITGG G +G   A      G  +++    D+L      D     SS     +VH D
Sbjct: 2  KL-LITGGCGFLGSNLASFALSQGIDLIVF---DNLSRKGATDNLHWLSSLGNFEFVHGD 57

Query: 74 VTKEKDIENAVN 85
          +  + D+   + 
Sbjct: 58 IRNKNDVTRLIT 69

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.5 bits (96), Expect = 3e-05
 Identities = 15/33 (45%), Positives = 16/33 (48%)

Query: 12 QGKVALITGGAGSIGECAARLFSKHGAKVLIAD 44
          Q KV LITG AG IG        K   KV+  D
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLD 47

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.8 bits (94), Expect = 5e-05
 Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 3/69 (4%)

Query: 14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
          + AL+TG  G  G   A+L  + G +V           S                Y   D
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGL---VARRSSDTRWRLRELGIEGDIQYEDGD 57

Query: 74 VTKEKDIEN 82
          +     ++ 
Sbjct: 58 MADACSVQR 66

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 40.6 bits (93), Expect = 7e-05
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 5  NSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSA 64
          N++ P   G + L+TG  G +         +HG KV           ++ +   +     
Sbjct: 5  NAVLPE--GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGR 62

Query: 65 NGCSYVHCDVTKEKDIEN 82
             + V  D+ K+   + 
Sbjct: 63 F-ETAVVEDMLKQGAYDE 79

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 39.8 bits (91), Expect = 1e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADIKD 47
          LITG  G +G    +       +V+  D++D
Sbjct: 5  LITGANGQLGREIQKQLKGKNVEVIPTDVQD 35

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 28/190 (14%)

Query: 12  QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH 71
           Q K  ++TGGAG IG         +   V +  + D L  +  +  +  +   +    V 
Sbjct: 1   QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKA-NLEAILGDRVELVV 58

Query: 72  CDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAF 131
            D+   + ++              +      IV  A  +  DN   +    +  N +G +
Sbjct: 59  GDIADAELVDK-------------LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTY 105

Query: 132 LGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIR 191
                     K   R   +ST  V G +                        E       
Sbjct: 106 ---TLLEAARKYDIRFHHVSTDEVYGDLPLREDLPG----------HGEGPGEKFTAETN 152

Query: 192 VNCVSPYAVS 201
            N  SPY+ +
Sbjct: 153 YNPSSPYSST 162

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 38.4 bits (87), Expect = 3e-04
 Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 10/70 (14%)

Query: 14 KVALITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC 72
          +V LI G  G IG     RL  +   +V   DI  D                    +V  
Sbjct: 2  RV-LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH--------PHFHFVEG 52

Query: 73 DVTKEKDIEN 82
          D++   +   
Sbjct: 53 DISIHSEWIE 62

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 6e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADIKDDL 49
           I G  G +G    R   + G   L+   +D+L
Sbjct: 6  FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL 38

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 27/145 (18%)

Query: 14  KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCD 73
           K  LITGGAG +G          G +V + D                 +  +   + + +
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT---------GRKRNVEHWIGHENFE 52

Query: 74  VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLG 133
           +     +E           ++D +++ A            N      + L  N     +G
Sbjct: 53  LINHDVVEPLYI-------EVDQIYHLASPAS------PPNYMYNPIKTLKTNT----IG 95

Query: 134 TKHAARVMKPAG-RGSIISTASVCG 157
           T +   + K  G R  + ST+ V G
Sbjct: 96  TLNMLGLAKRVGARLLLASTSEVYG 120

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 36.7 bits (83), Expect = 0.001
 Identities = 12/58 (20%), Positives = 21/58 (36%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
          L+ G  G IG   A+     G    +   +     +  +     S  A+G + VH  +
Sbjct: 7  LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 14 KVALITGGAGSIGECAARLFSKHGAKVLIAD 44
          +  L+TGGAG IG        + G   ++ D
Sbjct: 3  EKVLVTGGAGYIGSHTVLELLEAGYLPVVID 33

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 36.5 bits (82), Expect = 0.001
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV 74
          L+ G  G +G    R  +  G  + +    D   +  C D S+    A     +  DV
Sbjct: 4  LLFGKTGQVGWELQRSLAPVGNLIAL----DVHSKEFCGDFSNPKGVAETVRKLRPDV 57

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 36.2 bits (81), Expect = 0.002
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 10/68 (14%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK 76
          ++TGGAG IG    +  +  G   ++          V +++   +   N       D   
Sbjct: 3  IVTGGAGFIGSNIVKALNDKGITDIL----------VVDNLKDGTKFVNLVDLNIADYMD 52

Query: 77 EKDIENAV 84
          ++D    +
Sbjct: 53 KEDFLIQI 60

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.7 bits (81), Expect = 0.002
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADIK 46
           ITG  G I    AR     G  V+ +D K
Sbjct: 19 SITGAGGFIASHIARRLKHEGHYVIASDWK 48

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} Length = 230

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 16/101 (15%), Positives = 39/101 (38%), Gaps = 1/101 (0%)

Query: 1   MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS 60
             +    S  L+G    + G  G++ +   +  +  GAK+++ D+      +   +  + 
Sbjct: 27  AAKEAFGSDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 85

Query: 61  SSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKLDIMFNNA 101
           + + N    V CD+     +   +N       K  ++  +A
Sbjct: 86  AVAPNAIYGVTCDIFAPCALGAVLNDFTIPQLKAKVIAGSA 126

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 35.5 bits (80), Expect = 0.004
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 17 LITGGAGSIG-ECAARLFSKHGAKVLIAD 44
          L+ GGAG IG      L       V+I D
Sbjct: 6  LVCGGAGYIGSHFVRALLRDTNHSVVIVD 34

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.8 bits (78), Expect = 0.004
 Identities = 6/29 (20%), Positives = 13/29 (44%)

Query: 17 LITGGAGSIGECAARLFSKHGAKVLIADI 45
          L+TG +G  G+   +   +   K +   +
Sbjct: 7  LVTGASGRTGQIVYKKLKEGSDKFVAKGL 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.88
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.84
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.77
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.75
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.74
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.74
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.73
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.7
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.69
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.68
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.68
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.67
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.67
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.67
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.65
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.62
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.6
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.58
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.54
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.31
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.31
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.3
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.3
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.26
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.25
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.12
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.44
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.3
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.24
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.24
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.23
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.22
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.19
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.14
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.07
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.05
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.01
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.0
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.97
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.87
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.85
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.81
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.75
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.73
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.71
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.7
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.68
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.62
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.61
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.59
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.56
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.55
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.54
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.53
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.53
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.5
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.47
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.43
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.42
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.42
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.41
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.4
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.38
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.35
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.33
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.33
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.33
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.29
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.29
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.25
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.25
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.22
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.18
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.18
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.17
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.16
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.1
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.07
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.01
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.01
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.98
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.97
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.82
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.76
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	96.73
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.71
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.7
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.7
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.68
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.64
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.62
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.59
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.47
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.3
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.3
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.27
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.22
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.18
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.12
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.11
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.07
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.06
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.94
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.84
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.74
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.66
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.65
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.62
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.61
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.53
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	95.49
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.38
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.36
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.32
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.23
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.02
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.0
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.0
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.97
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.92
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.84
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.51
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.39
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.38
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.35
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.34
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.28
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.27
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.2
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.18
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.13
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.09
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.08
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.97
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.96
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.94
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.91
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.9
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.84
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.79
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.78
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.76
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.69
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.62
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.45
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	93.44
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.42
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	93.15
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.07
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.87
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	92.83
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	92.74
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.71
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.65
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.38
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.35
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	92.24
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.06
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.04
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.03
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	92.0
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.93
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.93
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.85
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	91.81
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.76
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	91.71
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.61
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.57
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.54
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	91.45
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.34
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.32
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.06
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.94
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.92
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.89
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.84
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.56
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	90.48
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	90.48
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.14
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	90.11
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.06
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	89.92
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	89.79
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	89.77
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.69
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.68
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.48
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.46
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	89.37
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.33
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	89.05
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.92
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.54
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.46
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.39
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.01
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	87.99
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	87.81
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	87.54
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.45
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.44
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	87.28
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.24
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	87.2
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	87.17
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.09
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	86.98
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	86.91
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	86.52
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.38
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.08
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.86
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	85.34
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.08
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	85.07
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.91
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.26
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.03
d1qo0d_	189	Positive regulator of the amidase operon AmiR {Pse	83.95
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	83.93
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.81
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	83.66
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	83.44
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	83.43
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.22
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	83.22
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	83.17
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.17
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.16
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	83.08
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	82.9
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	82.65
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	82.62
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	82.48
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	82.43
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.11
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	81.95
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.82
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.72
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	81.58
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.46
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	81.41
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.4
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	81.17
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.95
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.72
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	80.61

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=7.3e-51  Score=319.49  Aligned_cols=197  Identities=35%  Similarity=0.602  Sum_probs=183.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++...... .++..++||++|+++++++++++.+
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~-~~~~~~~~Dvt~~~~v~~~~~~~~~   79 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVSDEAQVEAYVTATTE   79 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEeccCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999998888887765432 3688899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+. .++.+.+.++|+++|++|+.++++++++++|+|++++.|+||++||..+..+.|...+|++
T Consensus        80 ~~G~iDiLVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  158 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  158 (258)
T ss_dssp             HHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HhCCCCEEEECCcccccC-CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHH
Confidence            999999999999986443 4578899999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+|+.+|+|+++.|++++|||||+|+||+++|||.+..
T Consensus       159 sKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~  197 (258)
T d1iy8a_         159 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS  197 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHH
Confidence            999999999999999999999999999999999997654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-50  Score=317.02  Aligned_cols=201  Identities=31%  Similarity=0.498  Sum_probs=185.8

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHH
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDI   80 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~   80 (214)
                      |.....|  +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+..+   ++.+++||++|++++
T Consensus         1 m~~~d~m--~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~---~~~~~~~Dvs~~~~~   75 (255)
T d1fmca_           1 MFNSDNL--RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG---QAFACRCDITSEQEL   75 (255)
T ss_dssp             CCCGGGG--CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHH
T ss_pred             CCCCCCC--CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC---cEEEEEccCCCHHHH
Confidence            4444433  68999999999999999999999999999999999999999999998887543   688999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      +++++++.+++|++|+||||||...+.  + .+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||.++..+
T Consensus        76 ~~~~~~~~~~~g~iDilvnnAG~~~~~--~-~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~  152 (255)
T d1fmca_          76 SALADFAISKLGKVDILVNNAGGGGPK--P-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK  152 (255)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCC--C-TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHcCCCCEeeeCCcCCCCC--c-ccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc
Confidence            999999999999999999999986543  3 4789999999999999999999999999999999999999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+++.+|++||+|+.+|+|+++.|++++|||||+|+||+++|++.+..+
T Consensus       153 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  201 (255)
T d1fmca_         153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI  201 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC
Confidence            9999999999999999999999999999999999999999999987665

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.9e-50  Score=312.59  Aligned_cols=193  Identities=45%  Similarity=0.710  Sum_probs=181.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      -.++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++..      ++.+++||++|+++++++++++.
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~   75 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD------AARYVHLDVTQPAQWKAAVDTAV   75 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG------GEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC------cceEEEeecCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888877643      57889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||...+  .++.+.+.++|++++++|+.+++.+++.+.|+|++++.|+||++||..+..+.+.+.+|+
T Consensus        76 ~~~g~idilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~  153 (244)
T d1nffa_          76 TAFGGLHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT  153 (244)
T ss_dssp             HHHSCCCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HHhCCCeEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchh
Confidence            999999999999998754  468899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|||.....
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  194 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP  194 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh
Confidence            99999999999999999999999999999999999987553

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.5e-51  Score=316.22  Aligned_cols=192  Identities=28%  Similarity=0.482  Sum_probs=180.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++..      ++..+++|++|+++++++++++.+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   74 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA------NGKGLMLNVTDPASIESVLEKIRA   74 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------CCcEEEEEecCHHHhhhhhhhhhc
Confidence            58999999999999999999999999999999999999988888877743      467889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||..+..+.++..+|++
T Consensus        75 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~a  152 (243)
T d1q7ba_          75 EFGEVDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAA  152 (243)
T ss_dssp             HTCSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             ccCCcceehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHH
Confidence            99999999999998754  4688999999999999999999999999999999998999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ||+|+++|+|+++.|++++|||||+|+||+++|+|.+.+.
T Consensus       153 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  192 (243)
T d1q7ba_         153 AKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS  192 (243)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh
Confidence            9999999999999999999999999999999999987653

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.9e-50  Score=317.72  Aligned_cols=195  Identities=34%  Similarity=0.516  Sum_probs=175.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++||++|||||++|||+++|++|+++|++|++++|++ +.++++.+++....+  .++.++++|++|+++++++++++.+
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG--VKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT--SCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999975 556677776655433  3678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+  .++.+.+.++|+++|++|+.++++++++++|+|++++.|+||++||..+..+.|++.+|++
T Consensus        80 ~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  157 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             HHSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhh
Confidence            99999999999998754  4688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|||+++.+
T Consensus       158 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (260)
T d1x1ta1         158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI  197 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             hhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh
Confidence            9999999999999999999999999999999999987654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3e-50  Score=314.88  Aligned_cols=195  Identities=32%  Similarity=0.434  Sum_probs=179.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.....   ++.++++|++|+++++++++++.
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~---~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY---ESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999999999999988876543   68899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++|++|+||||||....  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.+...+|+
T Consensus        83 ~~~g~iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS  160 (251)
T ss_dssp             HHCSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             HhcCCceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHH
Confidence            999999999999998754  467889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +||+|+++|+|+++.|++++|||||+|+||+++|+|..++
T Consensus       161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~  200 (251)
T d2c07a1         161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI  200 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc
Confidence            9999999999999999999999999999999999998764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=5.9e-50  Score=312.52  Aligned_cols=193  Identities=30%  Similarity=0.425  Sum_probs=169.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|+++.  ...+.++...   .++.+++||++|+++++++++++.+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g---~~~~~~~~Dvs~~~~v~~~~~~~~~   76 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLG---RRVLTVKCDVSQPGDVEAFGKQVIS   76 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcC---CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999998653  2333343332   3688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||....  .++.+.+.++|+++|++|+.+++++++.++|+|++++.|+||++||..+..+.|...+|++
T Consensus        77 ~~G~iDilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  154 (247)
T d2ew8a1          77 TFGRCDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIS  154 (247)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchh
Confidence            99999999999998754  4688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++.+...
T Consensus       155 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  194 (247)
T d2ew8a1         155 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------
T ss_pred             hhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccc
Confidence            9999999999999999999999999999999999987553

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.3e-50  Score=313.36  Aligned_cols=196  Identities=28%  Similarity=0.447  Sum_probs=180.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+  .++.++++|++|+++++++++++.+
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999998888887765443  3678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc-ccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG-VIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~~~~~y~  168 (214)
                      ++|++|+||||||....  .++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+ ..+.+...+|+
T Consensus        80 ~~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~  157 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA  157 (251)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHH
T ss_pred             HcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchH
Confidence            99999999999998643  4789999999999999999999999999999999999999999999765 45778889999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++|+|+.+|+|+++.|++++|||||+|+||+++|+|.+...
T Consensus       158 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~  198 (251)
T d1vl8a_         158 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF  198 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred             HHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence            99999999999999999999999999999999999987654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=4.3e-50  Score=314.07  Aligned_cols=192  Identities=38%  Similarity=0.572  Sum_probs=180.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++..      ++.+++||++|+++++++++++.+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   75 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD------AARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------ceEEEEcccCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999888777766532      578999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+  .++.+.+.++|++++++|+.+++++++.++|+|++++.|+||++||..+..+.++..+|++
T Consensus        76 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~a  153 (254)
T d1hdca_          76 EFGSVDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGA  153 (254)
T ss_dssp             HHSCCCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCccEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHH
Confidence            99999999999998754  4688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|+|..+..
T Consensus       154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~  193 (254)
T d1hdca_         154 SKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG  193 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcC
Confidence            9999999999999999999999999999999999987654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1e-49  Score=313.32  Aligned_cols=197  Identities=31%  Similarity=0.463  Sum_probs=180.2

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |..+++||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++.....   ++.+++||++|+++++++++
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~---~~~~~~~Dvt~~~~v~~~~~   77 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG---EAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC---EEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHH
Confidence            456899999999999999999999999999999999999864 56677777765433   67889999999999999999


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCC-eEEEecCCCcccCCCCC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTS  164 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~~sS~~~~~~~~~~  164 (214)
                      ++.+++|+||+||||||...+  .++.+.+.++|++++++|+.+++++++.++|+|.+++.+ +||++||..+..+.|.+
T Consensus        78 ~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~  155 (261)
T d1geea_          78 SAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLF  155 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHhCCCCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccc
Confidence            999999999999999998765  468899999999999999999999999999999887755 58999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+|+++|+|+.+|+|+++.|++++|||||+|+||+++||+..+.
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  199 (261)
T d1geea_         156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK  199 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred             cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh
Confidence            99999999999999999999999999999999999999997654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-49  Score=310.32  Aligned_cols=189  Identities=34%  Similarity=0.528  Sum_probs=174.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++        +..+++||++|+++++++++++.+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~--------~~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI--------GGAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH--------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc--------CCeEEEEeCCCHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999876533 33332        246789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|+||+||||||...+  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||+++|..+..+.+...+|++
T Consensus        73 ~~G~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  150 (248)
T d2d1ya1          73 ALGRVDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNA  150 (248)
T ss_dssp             HHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHH
T ss_pred             hcCCCCeEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHH
Confidence            99999999999998765  4688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|+|+.+|+|+++.|++++|||||+|+||+++||+.++..
T Consensus       151 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~  190 (248)
T d2d1ya1         151 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAI  190 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHh
Confidence            9999999999999999999999999999999999976543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.2e-49  Score=312.86  Aligned_cols=196  Identities=25%  Similarity=0.341  Sum_probs=183.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.....   ++.+++||++|+++++++++++.
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~---~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF---KVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---EEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---CceEEEeeCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999999999999888876543   67889999999999999999999


Q ss_pred             HHcC-CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYG-KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      ++++ ++|++|||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.|...+|
T Consensus        81 ~~~~~~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  158 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVY  158 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccch
Confidence            9986 79999999998754  46889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +++|+|+++|+|+++.|++++|||||+|+||+|+|+|.+...
T Consensus       159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  200 (259)
T d2ae2a_         159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI  200 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhh
Confidence            999999999999999999999999999999999999976554

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-50  Score=312.69  Aligned_cols=193  Identities=31%  Similarity=0.595  Sum_probs=177.5

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.       ++.+++||++|+++++++++++.
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-------~~~~~~~Dvs~~~~v~~~~~~~~   74 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-------GAVFILCDVTQEDDVKTLVSETI   74 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-------TEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-------CCeEEEccCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999888877766653       46889999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++||++|+||||||..... .++.+.+.++|++++++|+.+++.+++.++|+|+++ +|+||++||..+..+.|...+|+
T Consensus        75 ~~~g~iDilVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~  152 (250)
T d1ydea1          75 RRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYV  152 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhcCCCCEEEecccccccc-cccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhH
Confidence            9999999999999976432 457789999999999999999999999999999865 58999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      ++|+|+.+|+|+++.|++++|||||+|+||+|+|||++++..
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~  194 (250)
T d1ydea1         153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA  194 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHT
T ss_pred             HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhh
Confidence            999999999999999999999999999999999999876543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=9.5e-50  Score=313.61  Aligned_cols=193  Identities=31%  Similarity=0.525  Sum_probs=181.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.....   ++..++||++|+++++++++++.+
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~---~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV---EARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999998888876543   688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+. .++.+.+.++|++.+++|+.++++++++++|+|.+++.|+||++||..+..+.|.+.+|++
T Consensus        79 ~~g~iDilVnnaG~~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~a  157 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGT  157 (260)
T ss_dssp             HHSCCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHH
T ss_pred             HhCCCCeehhhhcccccc-CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHH
Confidence            999999999999986432 4688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      +|+|+.+|+|+++.|++++|||||+|+||+|+|++..
T Consensus       158 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~  194 (260)
T d1zema1         158 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW  194 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchh
Confidence            9999999999999999999999999999999999854

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=5e-49  Score=310.88  Aligned_cols=198  Identities=52%  Similarity=0.887  Sum_probs=182.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+||||||++|||+++|++|+++|++|++++|+++.++++.+++...    ..+.+++||++|+++++++++++.+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP----DVISFVHCDVTKDEDVRNLVDTTIA   78 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC----CceEEEEccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999988888887543    2477899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC-ccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS-HAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-~~y~  168 (214)
                      ++|++|++|||||........+.+.+.++|++++++|+.|+++++|.++|+|.+++.|+||++||..+..+.++. .+|+
T Consensus        79 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~  158 (268)
T d2bgka1          79 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT  158 (268)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH
T ss_pred             HcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccc
Confidence            999999999999987665456788999999999999999999999999999999999999999999999877665 4899


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCCC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLKL  211 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  211 (214)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|||..+.+..
T Consensus       159 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  201 (268)
T d2bgka1         159 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV  201 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC
T ss_pred             hhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcC
Confidence            9999999999999999999999999999999999998887653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.2e-49  Score=307.79  Aligned_cols=195  Identities=33%  Similarity=0.554  Sum_probs=180.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++...    .++.+++||++|+++++++++++.+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP----DQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998888888877532    3688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCC-eEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRG-SIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++|++|+||||||...+  .++.+.+.++|++++++|+.+++++++.++|+|++++.| +||++||..+..+.|...+|+
T Consensus        79 ~~G~iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~  156 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYN  156 (251)
T ss_dssp             HHSSCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCceEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHH
Confidence            99999999999999754  468999999999999999999999999999999998765 899999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHH--HccCCcEEEEEeCCcccCccccccCC
Q 044923          169 SSKHGVVGLMKNTAVE--LGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e--~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      ++|+|+.+|+|+++.|  ++++|||||+|+||+++|+|.+....
T Consensus       157 asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~  200 (251)
T d1zk4a1         157 ASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG  200 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT
T ss_pred             HHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC
Confidence            9999999999999998  57899999999999999999877653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=9.4e-50  Score=313.27  Aligned_cols=192  Identities=33%  Similarity=0.493  Sum_probs=179.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+...   ++.++++|++|+++++++++++.++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~---~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV---EADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999999999999998876543   68899999999999999999999999


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh--hccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARV--MKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      |+||+||||||...+  .++.+.+.++|++++++|+.++++++++++|+  |.+++.|+||+++|..+..+.|.+.+|++
T Consensus        78 g~iDilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~a  155 (257)
T d2rhca1          78 GPVDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSA  155 (257)
T ss_dssp             CSCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHH
Confidence            999999999998754  46889999999999999999999999999997  45667799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|||.+.+
T Consensus       156 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  194 (257)
T d2rhca1         156 SKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV  194 (257)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHH
Confidence            999999999999999999999999999999999997643

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.4e-49  Score=307.68  Aligned_cols=191  Identities=24%  Similarity=0.333  Sum_probs=179.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCe-------EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAK-------VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~-------vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.+++.....   ++.+++||++|++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~---~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA---LTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC---EEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCC---cEEEEEecCCCHHHHHHHHHH
Confidence            57999999999999999999999997       89999999999999888876533   678899999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +.++||++|+||||||...+  .++.+.+.++|+++|++|+.|++++++.++|+|++++.|+||++||..+..+.|++.+
T Consensus        79 ~~~~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~  156 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSI  156 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHHcCCcceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChH
Confidence            99999999999999998754  4688999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |++||+|+.+|+|+++.|++++|||||+|+||+++|+|+.+..
T Consensus       157 Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~  199 (240)
T d2bd0a1         157 YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD  199 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcC
Confidence            9999999999999999999999999999999999999987654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.3e-49  Score=311.09  Aligned_cols=195  Identities=28%  Similarity=0.425  Sum_probs=164.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.....   ++..+.||++|+++++++++++.+
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF---QVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---ceEEEeccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999888876543   688999999999999999999999


Q ss_pred             Hc-CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++ |++|+||||||...+  .++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.+...+|+
T Consensus        82 ~~~g~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  159 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  159 (259)
T ss_dssp             HHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             HhCCCcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccc
Confidence            98 789999999998765  368899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++|+|+.+|+|+++.|++++|||||+|+||+++|||.+...
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~  200 (259)
T d1xq1a_         160 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY  200 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------
T ss_pred             ccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc
Confidence            99999999999999999999999999999999999987654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.1e-49  Score=312.20  Aligned_cols=200  Identities=27%  Similarity=0.363  Sum_probs=184.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++........++.+++||++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999887654444688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +||++|++|||||..........+.+.++|++.+++|+.+++.++++++|+|++++.++|+++||.++..+.+++.+|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999998655444566678999999999999999999999999999998999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +|+|+.+|+|+++.|++++|||||+|+||+|+||+.....
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  200 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG  200 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc
Confidence            9999999999999999999999999999999999876543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.2e-49  Score=310.17  Aligned_cols=200  Identities=28%  Similarity=0.375  Sum_probs=169.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++........++.++++|++|+++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999887654444688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           90 QYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      ++|++|+||||||...+.  ..++.+.+.++|++.|++|+.+++.+++.++|+|++++.+.|+++||.++..+.|...+|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhh
Confidence            999999999999986432  234566789999999999999999999999999987754444444445567899999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +++|+|+.+|+|+++.|++++|||||+|+||+|+|+|.....
T Consensus       162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~  203 (264)
T d1spxa_         162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG  203 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----
T ss_pred             hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccC
Confidence            999999999999999999999999999999999999987654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-48  Score=304.00  Aligned_cols=188  Identities=36%  Similarity=0.546  Sum_probs=173.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++        ++.+++||++|+++++++++++.+
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~--------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV--------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999988777766544        357789999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.+++++++.++|+|++++.+.++++||. +..+.|+..+|++
T Consensus        74 ~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~a  150 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAA  150 (242)
T ss_dssp             HHSSCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHH
T ss_pred             hcCCceEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHH
Confidence            99999999999998754  46889999999999999999999999999999999988888888874 5778899999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+|+++|+|+++.|++++|||||+|+||+++|++..+.
T Consensus       151 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~  189 (242)
T d1ulsa_         151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV  189 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC
Confidence            999999999999999999999999999999999998764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-49  Score=311.86  Aligned_cols=201  Identities=28%  Similarity=0.379  Sum_probs=179.8

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+......++.+++||++|+++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999988765444468899999999999999999999


Q ss_pred             HHcCCccEEEeCCcccCCCC--CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           89 SQYGKLDIMFNNAGIVDEAK--PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      +++|++|+||||||...+..  ....+.+.++|++++++|+.+++.++++++|+|++++.+.|+++||.++..+.|+..+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~  160 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY  160 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcch
Confidence            99999999999999875432  2234677889999999999999999999999998876555555566778889999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+|+|+|...+.
T Consensus       161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  203 (272)
T d1xkqa_         161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG  203 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccC
Confidence            9999999999999999999999999999999999999987654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.9e-49  Score=308.88  Aligned_cols=190  Identities=32%  Similarity=0.526  Sum_probs=176.4

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.      .++.+++||++|+++++++++++.+
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~------~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG------PAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC------TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC------CceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999988888777763      2578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.|+++++++++|.|.++ ..|+||++||..+..+.|...+|+
T Consensus        76 ~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  153 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYC  153 (256)
T ss_dssp             HHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCccEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchh
Confidence            99999999999998754  468899999999999999999999999999986554 568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      +||+|+++|+|+++.|++++|||||+|+||+++||+++.
T Consensus       154 asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~  192 (256)
T d1k2wa_         154 ATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG  192 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH
T ss_pred             hhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh
Confidence            999999999999999999999999999999999998654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1e-48  Score=303.58  Aligned_cols=185  Identities=27%  Similarity=0.466  Sum_probs=165.7

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +|+++||++|||||++|||+++|++|+++|++|++++|+++.++              ++..+++|++|+++++++++++
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--------------~~~~~~~Dv~~~~~v~~~~~~~   67 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAV   67 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc--------------CceEEEEecCCHHHHHHHHHHH
Confidence            57799999999999999999999999999999999999875432              3567899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+++|++|+||||||...+  .++.+.+.++|++++++|+.+++.+++.++|+|++++.|+||++||..+..+.++..+|
T Consensus        68 ~~~~g~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y  145 (237)
T d1uzma1          68 EEHQGPVEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANY  145 (237)
T ss_dssp             HHHHSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHH
T ss_pred             HHhcCCceEEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHH
Confidence            9999999999999998754  46889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      ++||+|+++|+|+++.|++++|||||+|+||+++|+|.+.+
T Consensus       146 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  186 (237)
T d1uzma1         146 AASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL  186 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc
Confidence            99999999999999999999999999999999999997654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-49  Score=307.00  Aligned_cols=193  Identities=26%  Similarity=0.414  Sum_probs=180.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....+   ++..+.||++|+++++++++++.+
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~---~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA---KVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999876543   688999999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|++|||||...+.  .+.+.+.++|++++++|+.|++++++.++|+|.+++.|+||++||..+..+.|++++|++
T Consensus        81 ~~g~idilinnag~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  158 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCS  158 (244)
T ss_dssp             HTCCCSEEEECCCCCCCC--CCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHH
T ss_pred             HcCCCceeEeeccccccc--cccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHH
Confidence            999999999999997654  567888999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHcc---CCcEEEEEeCCcccCccccc
Q 044923          170 SKHGVVGLMKNTAVELGR---FGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~---~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      ||+|+.+|+++|+.|+++   +||+||+|+||+|+|+|.++
T Consensus       159 sKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~  199 (244)
T d1yb1a_         159 SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN  199 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC
Confidence            999999999999999876   58999999999999998765

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1e-48  Score=306.96  Aligned_cols=191  Identities=31%  Similarity=0.467  Sum_probs=177.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .|+||||||++|||+++|++|+++|++|++++|+++.++++.+++.+...   ++.+++||++|+++++++++++.++||
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG---HAVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999999999999999999998876543   688899999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecCCCcccCCCCCccchhhH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      ++|+||||||...+  .++.+.+.++|++++++|+.|+++++++++|+|.+++ .++||++||..+..+.|...+|+++|
T Consensus        78 ~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  155 (255)
T d1gega_          78 GFDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSK  155 (255)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CccEEEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCH
Confidence            99999999998654  4688999999999999999999999999999887665 57899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          172 HGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+.+|+|+++.|++++|||||+|+||+++|||+.++
T Consensus       156 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  192 (255)
T d1gega_         156 FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI  192 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH
T ss_pred             HHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhh
Confidence            9999999999999999999999999999999987653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.6e-49  Score=306.32  Aligned_cols=190  Identities=32%  Similarity=0.528  Sum_probs=176.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEe-cCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIAD-IKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.++++....   ++.++++|++|+++++++++++.+++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG---QAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC---EEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC---cEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999998875 566677778777766543   678999999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHH
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKH  172 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  172 (214)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++++.++|+|++++.|+||++||..+..+.++..+|++||+
T Consensus        79 ~iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  156 (244)
T d1edoa_          79 TIDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKA  156 (244)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHH
Confidence            99999999998754  4688999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          173 GVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       173 a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+.+|+|+++.|++++|||||+|+||+++|+|.+++
T Consensus       157 al~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~  192 (244)
T d1edoa_         157 GVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL  192 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             HHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh
Confidence            999999999999999999999999999999998765

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.7e-48  Score=303.95  Aligned_cols=192  Identities=32%  Similarity=0.519  Sum_probs=177.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..      +..++++|++|+++++++++++.+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~   76 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE------RSMFVRHDVSSEADWTLVMAAVQR   76 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCT------TEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------CeEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999888888777632      567889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|+||||||...+.  ++.+.+.++|++.+++|+.+++++++.++|+|+++ .|+||++||..+..+.+...+|++
T Consensus        77 ~~g~iDilVnnAG~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~a  153 (253)
T d1hxha_          77 RLGTLNVLVNNAGILLPG--DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSA  153 (253)
T ss_dssp             HHCSCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HhCCCCeEEecccccCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccc
Confidence            999999999999987653  68899999999999999999999999999999865 599999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccC--CcEEEEEeCCcccCccccccCC
Q 044923          170 SKHGVVGLMKNTAVELGRF--GIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~--gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +|+|+.+|+|+++.|+++.  |||||+|+||+++|++.+..++
T Consensus       154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~  196 (253)
T d1hxha_         154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP  196 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCc
Confidence            9999999999999999874  5999999999999999876553

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.6e-47  Score=299.20  Aligned_cols=196  Identities=25%  Similarity=0.382  Sum_probs=177.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||+||||||++|||+++|++|+++|++|++++|+++.++++.+++.....   .+.++.||++++++++++++++.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~---~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL---NVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---CceEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999998888876543   578899999999999999999999


Q ss_pred             Hc-CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QY-GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      ++ +.+|+||||||...+  .++.+.+.++|.+++++|+.+++.+++.+.|.|.+++.|+||++||..+..+.|.+.+|+
T Consensus        80 ~~~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~  157 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS  157 (258)
T ss_dssp             HTTSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCcEEEecccccccc--CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHH
Confidence            99 689999999998765  468999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      ++|+|+++|+|.++.|++++|||||+|+||+++|||.++.+.
T Consensus       158 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~  199 (258)
T d1ae1a_         158 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIK  199 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------
T ss_pred             HHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhh
Confidence            999999999999999999999999999999999999887654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-47  Score=295.76  Aligned_cols=191  Identities=27%  Similarity=0.364  Sum_probs=172.8

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |.+.++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.       .+..+++|++|++++++++  
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~--   71 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-------GIEPVCVDLGDWEATERAL--   71 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHH--
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-------CCeEEEEeCCCHHHHHHHH--
Confidence            5667999999999999999999999999999999999999888877766653       3678899999999987766  


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhh-ccCCCCeEEEecCCCcccCCCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVM-KPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                        +++|++|+||||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.| ++.+.|+||++||..+..+.|...
T Consensus        72 --~~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~  147 (244)
T d1pr9a_          72 --GSVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHS  147 (244)
T ss_dssp             --TTCCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBH
T ss_pred             --HHhCCceEEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchh
Confidence              467999999999998754  468899999999999999999999999999975 455679999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +|++||+|+++|+|+++.|++++|||||+|+||+++|++.+....
T Consensus       148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~  192 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS  192 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc
Confidence            999999999999999999999999999999999999999876543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.2e-46  Score=295.98  Aligned_cols=198  Identities=25%  Similarity=0.352  Sum_probs=176.6

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      |+++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++....+  .++.+++||++|++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG--VKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT--CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999998888877755433  3688999999999999999999


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-CCCCeEEEecCCCccc------
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP-AGRGSIISTASVCGVI------  159 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~------  159 (214)
                      +.+++|++|+||||||...+  .++.+.+.++|++.+++|+.|++++++.+.|+|.+ ...+.|++++|.....      
T Consensus        81 ~~~~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHHhCCCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence            99999999999999998654  46889999999999999999999999999999854 4567788877766553      


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          160 -GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       160 -~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                       +.+...+|+++|+|+.+|+|+++.|++++|||||+|+||+++|++....
T Consensus       159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~  208 (260)
T d1h5qa_         159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM  208 (260)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred             ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc
Confidence             3356789999999999999999999999999999999999999997654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.4e-47  Score=294.75  Aligned_cols=188  Identities=30%  Similarity=0.370  Sum_probs=170.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.       ++..+.+|++|++++++++    
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~----   69 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-------GIEPVCVDLGDWDATEKAL----   69 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-------TCEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-------CCeEEEEeCCCHHHHHHHH----
Confidence            36899999999999999999999999999999999999887777766553       4678899999999887665    


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-CCCCeEEEecCCCcccCCCCCccc
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP-AGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +++|++|+||||||...+  .++.+.+.++|++.+++|+.+++++++.+.|.|.+ ...|+||+++|..+..+.|...+|
T Consensus        70 ~~~g~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y  147 (242)
T d1cyda_          70 GGIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITY  147 (242)
T ss_dssp             TTCCCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHH
T ss_pred             HHcCCCeEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccc
Confidence            467999999999998754  46899999999999999999999999999998654 457899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +++|+|+.+|+|+++.|++++|||||+|+||+++|++.+...
T Consensus       148 ~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~  189 (242)
T d1cyda_         148 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS  189 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT
T ss_pred             cchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc
Confidence            999999999999999999999999999999999999987654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-47  Score=296.03  Aligned_cols=188  Identities=30%  Similarity=0.528  Sum_probs=171.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.... .++.+++||++|+++++++++++.++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEP-QKTLFIQCDVADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCG-GGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC-CcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999998888887664332 36788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC---CCeEEEecCCCcccCCCCCccc
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG---RGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      +|++|+||||||...+          ++|++++++|+.+++.+++.++|+|.+++   .|+||++||.++..+.|...+|
T Consensus        80 ~G~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  149 (254)
T d2gdza1          80 FGRLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVY  149 (254)
T ss_dssp             HSCCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccch
Confidence            9999999999998632          34899999999999999999999998764   4789999999999999999999


Q ss_pred             hhhHHHHHHHHHH--HHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKN--TAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~--la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ++||+|+.+|+|+  |+.|++++|||||+|+||+|+|+|++.+.
T Consensus       150 ~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~  193 (254)
T d2gdza1         150 CASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE  193 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcc
Confidence            9999999999997  78899999999999999999999987654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=299.66  Aligned_cols=197  Identities=26%  Similarity=0.377  Sum_probs=179.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCC--CCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS--SANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.....  ...++..++||++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999888888865432  2346889999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+++|++|+||||||...+  .++.+.+.++|++.+++|+.|+++++++++|.|.+++.++||++|| .+..+.|...+|
T Consensus        89 ~~~~G~iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHhCCeEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            9999999999999998654  4688999999999999999999999999999999999999999876 456678999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +++|+|+.+|+|+++.|++++|||||+|+||+|+|++..+.+
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  207 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY  207 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhc
Confidence            999999999999999999999999999999999999976554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=5.6e-46  Score=294.36  Aligned_cols=191  Identities=29%  Similarity=0.428  Sum_probs=171.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++..      ++..+.+|++++++++++++++.+
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGD------NVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC------CeeEEecccccHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999998888777766532      578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCC---CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCcc
Q 044923           90 QYGKLDIMFNNAGIVDEAKP---NILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHA  166 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  166 (214)
                      ++|++|++|||||...+...   ...+.+.++|+++|++|+.|++.+++.++|+|+++ +|+||+++|..+..+.+...+
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~  154 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPL  154 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHH
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCch
Confidence            99999999999998654321   23445566799999999999999999999999876 488999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|+|+.+|+|+++.|+++. ||||+|+||+|+|+|....
T Consensus       155 Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~  195 (276)
T d1bdba_         155 YTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPS  195 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCcc
Confidence            9999999999999999999975 9999999999999986543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-45  Score=289.41  Aligned_cols=197  Identities=27%  Similarity=0.397  Sum_probs=178.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...... .++.+++||++|+++++++++++.+
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-ceEEEEEccCCCHHHHHHHHHHHHH
Confidence            389999999999999999999999999999999999999999999988876432 3678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcccC--CCCCc
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGVIG--GVTSH  165 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~--~~~~~  165 (214)
                      ++|++|+||||||...+  .++.+.+.++|++.+++|+.+++++++.++|.|++++  +|+||++||.++...  .+...
T Consensus        86 ~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~  163 (257)
T d1xg5a_          86 QHSGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  163 (257)
T ss_dssp             HHCCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             hcCCCCEEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccH
Confidence            99999999999998754  3688999999999999999999999999999997754  689999999998754  45667


Q ss_pred             cchhhHHHHHHHHHHHHHHH--ccCCcEEEEEeCCcccCccccccC
Q 044923          166 AYTSSKHGVVGLMKNTAVEL--GRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~--~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .|+++|+|+.+|+|+++.|+  +++||+||+|+||.++|++.....
T Consensus       164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~  209 (257)
T d1xg5a_         164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH  209 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT
T ss_pred             HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC
Confidence            79999999999999999998  788999999999999999977654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=5.6e-46  Score=290.91  Aligned_cols=189  Identities=21%  Similarity=0.266  Sum_probs=168.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC-CHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT-KEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~   87 (214)
                      ++++||+||||||++|||+++|++|+++|++|++++|+.++.+...+......  ..++.++.+|++ +.++++++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINP--KVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCT--TSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCC--CCCEEEEEeecCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999999988877665544333322  236889999998 677899999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC---CCCeEEEecCCCcccCCCCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA---GRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~g~iv~~sS~~~~~~~~~~  164 (214)
                      .+++|++|+||||||..          +.++|++++++|+.|++.+++.++|+|.++   ..|+||++||.++..+.+.+
T Consensus        79 ~~~~g~iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~  148 (254)
T d1sbya1          79 FDQLKTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             HHHHSCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS
T ss_pred             HHHcCCCCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC
Confidence            99999999999999964          345699999999999999999999999775   35899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+|++||+|+.+|+++++.|++++|||||+|+||+|+|+|.+.+.
T Consensus       149 ~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~  193 (254)
T d1sbya1         149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFN  193 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccc
Confidence            999999999999999999999999999999999999999977654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.3e-46  Score=297.54  Aligned_cols=192  Identities=30%  Similarity=0.465  Sum_probs=172.6

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc---------chhhHHHHhhccCCCCCCceEEEeeCCCHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD---------LGESVCEDISSSSSSANGCSYVHCDVTKEK   78 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~---------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~   78 (214)
                      .++++||++|||||++|||+++|++|+++|++|++++++.+         .++++.+++..      +.....+|++|.+
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~~~~   75 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR------RGGKAVANYDSVE   75 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH------TTCEEEEECCCGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh------cccccccccchHH
Confidence            35789999999999999999999999999999999977543         33344444433      2456789999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc
Q 044923           79 DIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV  158 (214)
Q Consensus        79 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  158 (214)
                      +++++++++.+++|+||+||||||...+  .++.+.+.++|++++++|+.|++.+++.++|+|++++.|+||++||..+.
T Consensus        76 ~~~~~v~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~  153 (302)
T d1gz6a_          76 AGEKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  153 (302)
T ss_dssp             GHHHHHHHHHHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc
Confidence            9999999999999999999999999764  46899999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccc
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      .+.++..+|++||+|+.+|+|+++.|++++|||||+|+||++.|++...
T Consensus       154 ~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~  202 (302)
T d1gz6a_         154 YGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV  202 (302)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc
Confidence            9999999999999999999999999999999999999999998877543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.6e-46  Score=291.01  Aligned_cols=197  Identities=17%  Similarity=0.207  Sum_probs=177.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHH---cCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSK---HGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~---~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ..++||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++...... .++.+++||++|+++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~-~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPD-LKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTT-SEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCC-ceEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999997   7999999999999999999988765432 368899999999999999999


Q ss_pred             HHHHH----cCCccEEEeCCcccCC-CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC--CCeEEEecCCCcc
Q 044923           86 TAVSQ----YGKLDIMFNNAGIVDE-AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG--RGSIISTASVCGV  158 (214)
Q Consensus        86 ~~~~~----~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~  158 (214)
                      ++.+.    ++.+|++|||||...+ ...++.+.+.++|+++|++|+.+++++++.++|+|++++  .|+||++||.++.
T Consensus        81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~  160 (259)
T d1oaaa_          81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence            98873    4689999999998754 234578899999999999999999999999999999875  5899999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          159 IGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       159 ~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      .+.|++.+|++||+|+++|+|+|+.|  .+|||||+|+||+|+|+|.+..
T Consensus       161 ~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~  208 (259)
T d1oaaa_         161 QPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLA  208 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHH
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHh
Confidence            99999999999999999999999999  6799999999999999987643

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=7.8e-46  Score=289.99  Aligned_cols=185  Identities=21%  Similarity=0.212  Sum_probs=169.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++.....         .+.++|++|+++++++++++.++||+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999999999888776654432         234589999999999999999999999


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhHHHH
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSKHGV  174 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  174 (214)
                      |+||||||...+. .++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..+.+...+|+++|+|+
T Consensus        73 DiLVnNAg~~~~~-~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal  151 (252)
T d1zmta1          73 DVLVSNDIFAPEF-QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA  151 (252)
T ss_dssp             CEEEEECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCcCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccH
Confidence            9999999976432 468899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          175 VGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       175 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+|+|+++.|++++|||||+|+||+++|++...++
T Consensus       152 ~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  186 (252)
T d1zmta1         152 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY  186 (252)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhh
Confidence            99999999999999999999999999999977654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=6.2e-45  Score=286.03  Aligned_cols=193  Identities=27%  Similarity=0.434  Sum_probs=170.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec-CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI-KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++||+||||||++|||+++|++|+++|++|+++++ +.+.++++.+++.....   ++.+++||++|+++++++++++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~---~~~~~~~D~~~~~~v~~~~~~~   78 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA---QGVAIQADISKPSEVVALFDKA   78 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC---CEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC---CceEecCCCCCHHHHHHHHHHH
Confidence            4599999999999999999999999999999998765 44556777777766543   6889999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc-ccCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG-VIGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~~~~~  166 (214)
                      .+++|++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.++|+|+++  +.+++++|..+ ..+.|.+..
T Consensus        79 ~~~~g~idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~  154 (259)
T d1ja9a_          79 VSHFGGLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHAL  154 (259)
T ss_dssp             HHHHSCEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHH
T ss_pred             HHHcCCCcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchh
Confidence            9999999999999998654  467889999999999999999999999999999875  55666666555 447899999


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+++|+|.++.
T Consensus       155 Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~  196 (259)
T d1ja9a_         155 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDEN  196 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhh
Confidence            999999999999999999999999999999999999987543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.6e-45  Score=286.96  Aligned_cols=197  Identities=19%  Similarity=0.275  Sum_probs=166.5

Q ss_pred             CCCccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      |+.+++||++|||||+|  |||+++|++|+++|++|++++|+++..++..+.... .+   ...++++|++|++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~-~~---~~~~~~~D~~~~~~v~~~~   77 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA-LG---GALLFRADVTQDEELDALF   77 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-TT---CCEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc-cC---cccccccccCCHHHHHHHH
Confidence            44579999999999986  999999999999999999999987655544433332 22   4678999999999999999


Q ss_pred             HHHHHHcCCccEEEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV  162 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  162 (214)
                      +++.+++|++|+||||||...+  ...++.+.+.++|+..+++|+.+++.+++.+.|+|++.  |+||++||..+..+.|
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~  155 (256)
T d1ulua_          78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVP  155 (256)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCT
T ss_pred             HHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCC
Confidence            9999999999999999998642  22346788899999999999999999999999999764  8899999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+.+|+++|+|+++|+|+++.|++++|||||+|+||+++|++.....
T Consensus       156 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~  202 (256)
T d1ulua_         156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP  202 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh
Confidence            99999999999999999999999999999999999999999877654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-45  Score=291.06  Aligned_cols=194  Identities=23%  Similarity=0.279  Sum_probs=164.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEE---ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIA---DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~---~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .|+||||||++|||+++|+.|+++|++|+++   .|+.+..+.+.+..........++..+.||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5899999999999999999999999985444   5555554445444444333344789999999999999999988743


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                        |.+|++|||||.....  ++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||.++..+.|...+|++
T Consensus        82 --g~idilvnnag~~~~~--~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLG--PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCCCCS--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhcccccccc--cccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence              7999999999987543  578899999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      ||+|+.+|+++|+.|++++||+||+|+||+|+|++++++..
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~  198 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLG  198 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------C
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhcc
Confidence            99999999999999999999999999999999999887654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.1e-44  Score=281.50  Aligned_cols=188  Identities=33%  Similarity=0.542  Sum_probs=164.3

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .++||+||||||++|||+++|+.|+++|++|++++|+.+++++..+++.      .++.+++||++++++++++++++.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dls~~~~i~~~~~~i~~   75 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE------AEAIAVVADVSDPKAVEAVFAEALE   75 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC------SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC------CceEEEEecCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999887766655542      2678899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      ++|++|++|||||...+  .++.+.+.++|++++++|+.+++.+++.++|+|.++  +.++++||. +..+.|.+..|++
T Consensus        76 ~~g~iDiLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~-a~~~~~~~~~Y~~  150 (241)
T d2a4ka1          76 EFGRLHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSV-AGLGAFGLAHYAA  150 (241)
T ss_dssp             HHSCCCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCC-TTCCHHHHHHHHH
T ss_pred             HhCCccEeccccccccc--cchhhhhccccccccccccccccccccccccccccc--cceeecccc-ccccccCccccch
Confidence            99999999999998654  468899999999999999999999999999999775  445555554 4556688899999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+|+++|+|+++.|++++|||||+|+||+++|++.+.+
T Consensus       151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~  189 (241)
T d2a4ka1         151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL  189 (241)
T ss_dssp             CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS
T ss_pred             hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh
Confidence            999999999999999999999999999999999997654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=9.2e-44  Score=277.70  Aligned_cols=193  Identities=21%  Similarity=0.227  Sum_probs=169.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHH---HcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFS---KHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~---~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .|+||||||++|||+++|+.|+   ++|++|++++|++++++++.+.... .   .++.+++||++|+++++++++++.+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~-~---~~~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H---SNIHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C---TTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc-C---CcEEEEEEEeccHHHHHHHHhhhHH
Confidence            4899999999999999999996   5799999999999998877654443 2   2688999999999999999999854


Q ss_pred             --HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-----------CCCeEEEecCCC
Q 044923           90 --QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-----------GRGSIISTASVC  156 (214)
Q Consensus        90 --~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~~sS~~  156 (214)
                        .++++|+||||||...+. ..+.+.+.++|++++++|+.|++.+++.++|+|+++           ++|++|+++|..
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~  156 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  156 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhhcCCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc
Confidence              678999999999987543 356788999999999999999999999999999764           478999999988


Q ss_pred             ccc---CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          157 GVI---GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       157 ~~~---~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      +..   +.+++.+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|..+..+
T Consensus       157 g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~  213 (248)
T d1snya_         157 GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP  213 (248)
T ss_dssp             GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC
Confidence            764   355677999999999999999999999999999999999999999887654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.1e-43  Score=280.88  Aligned_cols=193  Identities=28%  Similarity=0.445  Sum_probs=171.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC-cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD-DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++.....   ++.++++|++|+++++++++++
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~---~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS---DAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC---CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCC---ceeeEeCCCCCHHHHHHHHHHH
Confidence            358999999999999999999999999999999998764 556677777665543   6889999999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCcc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHA  166 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~  166 (214)
                      .+.+|++|++|||+|....  .++.+.+.++|++.+++|+.+++.+++.++|+|.++  |++++++|..+. .+.+.+..
T Consensus        91 ~~~~g~idilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~  166 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAV  166 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHH
T ss_pred             HHHhCCCCccccccccchh--hhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhh
Confidence            9999999999999998654  468899999999999999999999999999999875  667777776654 45777788


Q ss_pred             chhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          167 YTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       167 y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+++|+|+++|+|+++.|++++|||||+|+||+++|++.+.+
T Consensus       167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  208 (272)
T d1g0oa_         167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAV  208 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHH
Confidence            999999999999999999999999999999999999987654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.9e-44  Score=277.42  Aligned_cols=179  Identities=23%  Similarity=0.371  Sum_probs=161.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++.            ...++.||+++.      ++.+.++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~------------~~~~~~~Dv~~~------~~~~~~~   63 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------------GHRYVVCDLRKD------LDLLFEK   63 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------------CSEEEECCTTTC------HHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc------------CCcEEEcchHHH------HHHHHHH
Confidence            7899999999999999999999999999999999986543221            235678999863      4556778


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||+++|..+..+.+....|+++
T Consensus        64 ~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~as  141 (234)
T d1o5ia_          64 VKEVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA  141 (234)
T ss_dssp             SCCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hCCCcEEEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhH
Confidence            8999999999997643  46789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |+|+.+|+|+++.|++++|||||+|+||+++|++..+..
T Consensus       142 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~  180 (234)
T d1o5ia_         142 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL  180 (234)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc
Confidence            999999999999999999999999999999999987654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-44  Score=283.47  Aligned_cols=189  Identities=24%  Similarity=0.289  Sum_probs=167.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..+++.....   ++.+++||++|.++++++++++.+++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL---SPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC---CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            56799999999999999999986 89999999999999999999887643   578999999999999999999999999


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  161 (214)
                      +||+||||||...+.  ...+.+.++|+.+|++|++|++++++.++|+|+++  |+||++||..+..+.           
T Consensus        81 ~iDiLVnNAGi~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~  156 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKV--ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKF  156 (275)
T ss_dssp             SEEEEEECCCCCCCT--TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CcEEEEEcCCcCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhh
Confidence            999999999997654  45677888999999999999999999999999764  889999997664322           


Q ss_pred             ------------------------------CCCccchhhHHHHHHHHHHHHHHHcc----CCcEEEEEeCCcccCccccc
Q 044923          162 ------------------------------VTSHAYTSSKHGVVGLMKNTAVELGR----FGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       162 ------------------------------~~~~~y~~sK~a~~~l~~~la~e~~~----~gi~v~~v~Pg~v~t~~~~~  207 (214)
                                                    ....+|++||+++..|++.++.|+++    .||+||+|+||+|+|+|...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~  236 (275)
T d1wmaa1         157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  236 (275)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC
Confidence                                          22356999999999999999999865    49999999999999999876


Q ss_pred             cC
Q 044923          208 FL  209 (214)
Q Consensus       208 ~~  209 (214)
                      ..
T Consensus       237 ~~  238 (275)
T d1wmaa1         237 KA  238 (275)
T ss_dssp             TC
T ss_pred             cc
Confidence            54

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=279.45  Aligned_cols=193  Identities=21%  Similarity=0.269  Sum_probs=177.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||+|||||||+|||+++|++|+++|++|++++|++++++++.+++....+  ..+..+.+|+++.+++...++++.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA--ASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC--SEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc--ccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999988887765543  35788999999999999999999999


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|.+|+++||||...+  .++.+.+.++|++++++|+.|++.+++.++|+|++ ++|+||++||.++..+.|.+.+|++|
T Consensus        90 ~g~~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~as  166 (269)
T d1xu9a_          90 MGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSAS  166 (269)
T ss_dssp             HTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             hCCccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHH
Confidence            9999999999998754  35778899999999999999999999999999975 46999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHcc--CCcEEEEEeCCcccCcccccc
Q 044923          171 KHGVVGLMKNTAVELGR--FGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~--~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      |+|+++|+++|+.|+++  .||+||+|+||+|+|+|.++.
T Consensus       167 Kaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~  206 (269)
T d1xu9a_         167 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA  206 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh
Confidence            99999999999999975  579999999999999997654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=270.73  Aligned_cols=184  Identities=33%  Similarity=0.506  Sum_probs=163.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||++|||||++|||+++|+.|+++|++|++++|++++++++.+.        ..+....+|+.+.+.++    +..+.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~--------~~~~~~~~d~~~~~~~~----~~~~~   71 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--------PGIQTRVLDVTKKKQID----QFANE   71 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS--------TTEEEEECCTTCHHHHH----HHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--------cCCceeeeecccccccc----ccccc
Confidence            8999999999999999999999999999999999998766554432        24677888988766555    44556


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcc-cCCCCCccchh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGV-IGGVTSHAYTS  169 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y~~  169 (214)
                      ++++|+||||||...+.  ++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.|+||+++|..+. .+.+...+|++
T Consensus        72 ~~~id~lVn~ag~~~~~--~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~  149 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYST  149 (245)
T ss_dssp             CSCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHH
T ss_pred             cccceeEEecccccCCC--ChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHH
Confidence            78999999999987653  6789999999999999999999999999999999999999999998775 57888999999


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +|+|+++|+|+++.|++++|||||+|+||+++||+..+.
T Consensus       150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~  188 (245)
T d2ag5a1         150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQER  188 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhh
Confidence            999999999999999999999999999999999997654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=3.7e-42  Score=274.78  Aligned_cols=197  Identities=27%  Similarity=0.366  Sum_probs=173.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+  .++.+++||++++++++++++.+.+
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG--NKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC--CceEEEEecccChHHHHHHhhhhhh
Confidence            79999999999999999999999999999999999999998888887765543  3578899999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-CCCCeEEEecCCCcccCCCCCccch
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKP-AGRGSIISTASVCGVIGGVTSHAYT  168 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~~~~~~y~  168 (214)
                      +++++|++|||||.....  ++.+.+.++|+..+.+|+.+.+.+.+...+.+.. ...+.+++++|..+..+.+...+|+
T Consensus       100 ~~g~iDilvnnAg~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ys  177 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFIS--PTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA  177 (294)
T ss_dssp             HTCSCSEEEECCCCCCCS--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hccccchhhhhhhhcccc--ccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHH
Confidence            999999999999987543  5788899999999999999999998887666654 4567889999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      ++|+|+++|+|.++.|++++|||||+|+||+|+|++...+..
T Consensus       178 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~  219 (294)
T d1w6ua_         178 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD  219 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC
Confidence            999999999999999999999999999999999999877653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=265.90  Aligned_cols=194  Identities=34%  Similarity=0.553  Sum_probs=172.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++..      +.....+|+.+.+.+++.+.++..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~   75 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN------NCVFAPADVTSEKDVQTALALAKG   75 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCT------TEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCC------Cccccccccccccccccccccccc
Confidence            58999999999999999999999999999999999999998888877643      567889999999999999999999


Q ss_pred             HcCCccEEEeCCcccCCCC----CCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC------CCCeEEEecCCCccc
Q 044923           90 QYGKLDIMFNNAGIVDEAK----PNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA------GRGSIISTASVCGVI  159 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~g~iv~~sS~~~~~  159 (214)
                      .++.+|.+++|++......    .++.+.+.++|++++++|+.+++++++++.|+|..+      ++|+||++||..+..
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  155 (248)
T d2o23a1          76 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  155 (248)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             ccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc
Confidence            9999999999987764332    245677889999999999999999999999998654      578999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          160 GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       160 ~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      +.|++.+|+++|+|+++|+|+++.|++++|||||+|+||+++|+|...+.
T Consensus       156 ~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~  205 (248)
T d2o23a1         156 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP  205 (248)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC
Confidence            99999999999999999999999999999999999999999999987654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-42  Score=269.81  Aligned_cols=191  Identities=20%  Similarity=0.203  Sum_probs=156.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+..      ..++.+++||++|+++++++++++.+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~------~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK------DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh------CCceEEEEEecCCHHHHHHHHHHHHH
Confidence            459999999999999999999999996  5888899988876654321      13688999999999999999999999


Q ss_pred             HcC--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-----------CCCeEEEecCCC
Q 044923           90 QYG--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-----------GRGSIISTASVC  156 (214)
Q Consensus        90 ~~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~g~iv~~sS~~  156 (214)
                      .++  ++|+||||||...+. .++.+.+.++|++.|++|+.|++.+++.++|+|+++           ..+.+++++|..
T Consensus        76 ~~~~~~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~  154 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGL  154 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGG
T ss_pred             HhCCCCeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccc
Confidence            876  499999999987543 356788999999999999999999999999999764           246888888866


Q ss_pred             cccCC-------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          157 GVIGG-------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       157 ~~~~~-------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .....       ....+|++||+|+.+|+++++.|+++.||+||+|+||+|+|+|..+..
T Consensus       155 ~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~  214 (250)
T d1yo6a1         155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA  214 (250)
T ss_dssp             GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------
T ss_pred             ccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC
Confidence            55432       234569999999999999999999999999999999999999976543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9e-40  Score=253.14  Aligned_cols=183  Identities=15%  Similarity=0.181  Sum_probs=159.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +||++|||||++|||+++|+.|+++|++|+++++++....             .......+|.++.++.+.+..++.+.+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGKLL   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------cccceeecccCcHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999988654211             123456778888999999888888765


Q ss_pred             C--CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           92 G--KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        92 g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +  ++|+||||||..... ..+.+.+.++|++++++|+.+++.+++.++|+|++  .|+||++||.++..+.|++.+|++
T Consensus        68 ~~~~iD~lInnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  144 (236)
T d1dhra_          68 GDQKVDAILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGM  144 (236)
T ss_dssp             TTCCEEEEEECCCCCCCB-CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             CCCCceEEEECCcccccc-cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHH
Confidence            4  799999999975433 34566778899999999999999999999999976  489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCccccccCC
Q 044923          170 SKHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      ||+|+++|+|+++.|++  ++||+||+|+||+++|||.+...+
T Consensus       145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~  187 (236)
T d1dhra_         145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP  187 (236)
T ss_dssp             HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST
T ss_pred             HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc
Confidence            99999999999999998  579999999999999999876554

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.2e-38  Score=257.92  Aligned_cols=194  Identities=20%  Similarity=0.229  Sum_probs=159.6

Q ss_pred             CCcEEEEec--CCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCC--------C-CCCceEE----------
Q 044923           12 QGKVALITG--GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS--------S-ANGCSYV----------   70 (214)
Q Consensus        12 ~~k~~lItG--as~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~--------~-~~~v~~~----------   70 (214)
                      .+|++||||  +++|||++||+.|+++|++|++++++................        . .......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  668999999999999999999998876543322221111100        0 0001122          


Q ss_pred             ----------EeeCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh
Q 044923           71 ----------HCDVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARV  140 (214)
Q Consensus        71 ----------~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  140 (214)
                                .+|+++.++++++++++.+.||+||+||||||...+...++.+.+.++|++.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      3477788999999999999999999999999987665567889999999999999999999999999999


Q ss_pred             hccCCCCeEEEecCCCcccCCCC-CccchhhHHHHHHHHHHHHHHHcc-CCcEEEEEeCCcccCccccc
Q 044923          141 MKPAGRGSIISTASVCGVIGGVT-SHAYTSSKHGVVGLMKNTAVELGR-FGIRVNCVSPYAVSSPMAKG  207 (214)
Q Consensus       141 ~~~~~~g~iv~~sS~~~~~~~~~-~~~y~~sK~a~~~l~~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~  207 (214)
                      |+++  |+||++||.++..+.|. ...|+++|+|+++|+|+++.|+++ +|||||+|+||+|+|++...
T Consensus       161 m~~~--GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~  227 (329)
T d1uh5a_         161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA  227 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGG
T ss_pred             cccc--cccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhc
Confidence            9764  78999999999998887 467899999999999999999986 69999999999999965544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.4e-38  Score=245.00  Aligned_cols=182  Identities=18%  Similarity=0.221  Sum_probs=154.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH--H
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS--Q   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~   90 (214)
                      .++||||||++|||+++|++|+++|++|++++|+++....             ......+|+.+.++.....+.+.+  +
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-------------SNILVDGNKNWTEQEQSILEQTASSLQ   68 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-------------EEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-------------ccceeccccCchhHHHHHHHHHHHHhc
Confidence            3567999999999999999999999999999998653211             123456788888888777777766  4


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                      +|+||+||||||..... .+..+.+.++|+.++++|+.+++.+++.++|+|++.  |+||++||..+..+.|++.+|++|
T Consensus        69 ~g~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~as  145 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMA  145 (235)
T ss_dssp             TCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCeeEEEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHH
Confidence            58999999999976443 234555678899999999999999999999999764  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHc--cCCcEEEEEeCCcccCccccccCC
Q 044923          171 KHGVVGLMKNTAVELG--RFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       171 K~a~~~l~~~la~e~~--~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                      |+|+++|+++++.|++  +.||+||+|+||+++|++.++..+
T Consensus       146 Kaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~  187 (235)
T d1ooea_         146 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP  187 (235)
T ss_dssp             HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST
T ss_pred             HHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc
Confidence            9999999999999997  579999999999999999887654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=6.9e-37  Score=242.67  Aligned_cols=189  Identities=22%  Similarity=0.249  Sum_probs=152.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecC-CcchhhHHHHhhccCCC---------------CCCceEEEeeCCCH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIK-DDLGESVCEDISSSSSS---------------ANGCSYVHCDVTKE   77 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~-~~~~~~~~~~~~~~~~~---------------~~~v~~~~~D~~~~   77 (214)
                      -+||||||++|||+++|++|+++|++|++++++ .+..+++.+++....+.               ...+....+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            479999999999999999999999999988765 45556666666543321               11233456789999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHH--------------HHHHhhhhhHHHHHHHHHHHhh--
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEF--------------ERILSVNLVGAFLGTKHAARVM--  141 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~--------------~~~~~~n~~~~~~~~~~~~~~~--  141 (214)
                      ++++++++++.+++|++|+||||||...+.  ++.+.+.++|              ...|.+|+.+++.+.+.+.+.+  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPT--PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCC--chhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            999999999999999999999999987653  4555555444              4589999999999999988764  


Q ss_pred             ----ccCCCCeEEEecCCCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          142 ----KPAGRGSIISTASVCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       142 ----~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                          .+.+.++||+++|.....+.+++.+|+++|+|+++|+|+++.|++++|||||+|+||++.+..
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~  227 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  227 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc
Confidence                444578999999999999999999999999999999999999999999999999999876543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-37  Score=239.82  Aligned_cols=194  Identities=19%  Similarity=0.247  Sum_probs=167.3

Q ss_pred             ccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++....+   .....++|+++..++.+.++++
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   77 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLG---SDIVLQCDVAEDASIDTMFAEL   77 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcC---CcceeecccchHHHHHHHHHHh
Confidence            37999999999999  899999999999999999999987655444 33333322   4578899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCCCC---CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKP---NILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      .+.++++|++|+|++.......   .......+.|...+++|+.+.+.+.+.+.|.+.+.  +.||++||..+..+.|.+
T Consensus        78 ~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~~~~~  155 (258)
T d1qsga_          78 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNY  155 (258)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBCTTT
T ss_pred             hhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccCCCCc
Confidence            9999999999999988643211   12345667799999999999999999999999764  679999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      ..|+++|+|+++|+|+++.|++++|||||+|+||+|+|++.....
T Consensus       156 ~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  200 (258)
T d1qsga_         156 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK  200 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc
Confidence            999999999999999999999999999999999999999987653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.9e-36  Score=233.61  Aligned_cols=181  Identities=34%  Similarity=0.467  Sum_probs=155.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +|++|||||++|||+++|++|+++|++|++++|+++..               +.....+|+++......+..+..+...
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~---------------~~~~~~~d~~~~~~~~~~~~~~~~~~~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE---------------DLIYVEGDVTREEDVRRAVARAQEEAP   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS---------------SSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc---------------cceEeeccccchhhhHHHHHhhhcccc
Confidence            59999999999999999999999999999999986431               356788999999999999988877764


Q ss_pred             CccEEEeCCcccCC--CCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHh------hccCCCCeEEEecCCCcccCCCCC
Q 044923           93 KLDIMFNNAGIVDE--AKPNILDNDQAEFERILSVNLVGAFLGTKHAARV------MKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        93 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                       .+.++.+++....  ........+.+.|++.+++|+.+++.+++.+.+.      |.+++.|+||++||..+..+.+++
T Consensus        66 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~  144 (241)
T d1uaya_          66 -LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ  144 (241)
T ss_dssp             -EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC
T ss_pred             -ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc
Confidence             4555566554422  1233456678899999999999999999999998      555678999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .+|+++|+|+++|+|+++.|++++|||||+|+||+++|++.....
T Consensus       145 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  189 (241)
T d1uaya_         145 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP  189 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh
Confidence            999999999999999999999999999999999999999987653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1e-36  Score=243.15  Aligned_cols=200  Identities=21%  Similarity=0.220  Sum_probs=156.8

Q ss_pred             CCCccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC------C--CCCCc-eEEEee--
Q 044923            7 MSPRLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS------S--SANGC-SYVHCD--   73 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~------~--~~~~v-~~~~~D--   73 (214)
                      |..+++||++|||||+|  |||+++|++|+++|++|++++|+...............      .  ..... ....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            67899999999999875  99999999999999999999987543222211111000      0  00000 122333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHH
Q 044923           74 ------------------VTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTK  135 (214)
Q Consensus        74 ------------------~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  135 (214)
                                        .++..+++++++++.++||+||+||||||.......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              35667788999999999999999999999875545578899999999999999999999999


Q ss_pred             HHHHhhccCCCCeEEEecCCCcc-cCCCCCccchhhHHHHHHHHHHHHHHHc-cCCcEEEEEeCCcccCcccccc
Q 044923          136 HAARVMKPAGRGSIISTASVCGV-IGGVTSHAYTSSKHGVVGLMKNTAVELG-RFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       136 ~~~~~~~~~~~g~iv~~sS~~~~-~~~~~~~~y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                      +++|.+.+++  .++.+++.+.. ...+....|+++|+++..+++.++.|++ ++|||||+|+||+++|++.+..
T Consensus       162 ~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~  234 (297)
T d1d7oa_         162 HFLPIMNPGG--ASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             HHGGGEEEEE--EEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             HHHHHhhcCC--cceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc
Confidence            9999998764  45555554444 4457778999999999999999999996 5799999999999999998754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=3.6e-35  Score=230.97  Aligned_cols=192  Identities=18%  Similarity=0.227  Sum_probs=160.7

Q ss_pred             ccCCcEEEEec--CCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITG--GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItG--as~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++||++||||  |++|||+++|++|+++|++|++++|+.++..+   .+.+..+  .+...++||+++++++..+++.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~--~~~~~~~~dv~~~~~~~~~~~~v   77 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLP--AKAPLLELDVQNEEHLASLAGRV   77 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSS--SCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcC--CceeeEeeecccccccccccchh
Confidence            48999999999  46799999999999999999999998765432   2222222  25678899999999999999999


Q ss_pred             HHHc---CCccEEEeCCcccCCC---CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC
Q 044923           88 VSQY---GKLDIMFNNAGIVDEA---KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG  161 (214)
Q Consensus        88 ~~~~---g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  161 (214)
                      .+.+   +++|+++||+|.....   ..++.+.+.++|.+.+.+|+.+.+...+...+.+..   +.+++++|.....+.
T Consensus        78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~  154 (268)
T d2h7ma1          78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAM  154 (268)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCC
T ss_pred             hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccC
Confidence            8875   5799999999976322   234567889999999999999999999888877654   345666677778889


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      |.+..|+++|+|+.+|+|+++.|++++|||||+|+||++.|+++..+.
T Consensus       155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~  202 (268)
T d2h7ma1         155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIV  202 (268)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHH
T ss_pred             cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhc
Confidence            999999999999999999999999999999999999999999876544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=8.9e-35  Score=229.46  Aligned_cols=194  Identities=19%  Similarity=0.264  Sum_probs=155.5

Q ss_pred             ccCCcEEEEecCCC--hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAG--SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~--gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .|+||++|||||+|  |||+++|+.|+++|++|++++|+++ +++..+++.....   ...+..+|++++++++++++++
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~---~~~~~~~d~~~~~~~~~~~~~~   77 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSV   77 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCC---ceeEeeecccchhhHHHHHHHH
Confidence            37999999999765  9999999999999999999999864 4444455544433   4678899999999999999999


Q ss_pred             HHHcCCccEEEeCCcccCCC--CCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCc
Q 044923           88 VSQYGKLDIMFNNAGIVDEA--KPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSH  165 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  165 (214)
                      .+.+|++|++|+|+|.....  .........+.+...+.++.++.+...+...+....  .+.|+++|+.+...+.+...
T Consensus        78 ~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~~~~~~~~~~~~  155 (274)
T d2pd4a1          78 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYN  155 (274)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc--Ccceeeecccccccccccch
Confidence            99999999999999987432  122334455566666666666666666655554332  34577778877788888889


Q ss_pred             cchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccC
Q 044923          166 AYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFL  209 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  209 (214)
                      .|+++|+|+.+|+|+++.|++++|||||+|+||++.|++.....
T Consensus       156 ~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~  199 (274)
T d2pd4a1         156 VMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA  199 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST
T ss_pred             hhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC
Confidence            99999999999999999999999999999999999999987654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=3.6e-34  Score=224.80  Aligned_cols=191  Identities=21%  Similarity=0.272  Sum_probs=155.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-hhhHHHHhhccCCCCCCceEEEeeCCC----HHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-GESVCEDISSSSSSANGCSYVHCDVTK----EKDIENAVNTAV   88 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~   88 (214)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++......  .+...++|+.+    .+.+.++++++.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT--CEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCC--ceEEEecccccchhHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998654 45666666655432  45556655543    677888889999


Q ss_pred             HHcCCccEEEeCCcccCCCCC---------CCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-----CCCeEEEecC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKP---------NILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-----GRGSIISTAS  154 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS  154 (214)
                      +++|++|++|||||...+...         ...+...+.+...+..|+.+.+...+...+.+...     ..+.+++++|
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence            999999999999998754321         01122345678899999999999999888887553     3568889999


Q ss_pred             CCcccCCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          155 VCGVIGGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       155 ~~~~~~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ..+..+.|++.+|++||+|+++|+|+++.|++++|||||+|+||+++|++..
T Consensus       160 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~  211 (266)
T d1mxha_         160 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM  211 (266)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS
T ss_pred             ccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC
Confidence            9999999999999999999999999999999999999999999999998754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=5.4e-34  Score=223.29  Aligned_cols=178  Identities=17%  Similarity=0.255  Sum_probs=149.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcch---hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLG---ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      +++++|||||++|||+++|++|+++|+ +|++++|+....   +++.+++....   .++.++.||++|+++++++++++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g---~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG---ARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc---ccccccccccchHHHHHHhhccc
Confidence            468999999999999999999999999 488899875443   44444444332   36899999999999999999988


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      .+. +++|.+|||+|.....  ++.+.+.++|+.++++|+.+++.+.+.    +.+.+.++||++||..+..+.+++..|
T Consensus        85 ~~~-~~i~~vv~~ag~~~~~--~~~~~~~~~~~~~~~~~~~g~~~l~~~----~~~~~~~~iv~~SS~a~~~g~~~~~~Y  157 (259)
T d2fr1a1          85 GDD-VPLSAVFHAAATLDDG--TVDTLTGERIERASRAKVLGARNLHEL----TRELDLTAFVLFSSFASAFGAPGLGGY  157 (259)
T ss_dssp             CTT-SCEEEEEECCCCCCCC--CGGGCCHHHHHHHTHHHHHHHHHHHHH----HTTSCCSEEEEEEEHHHHTCCTTCTTT
T ss_pred             ccc-cccccccccccccccc--ccccccHHHHHHHhhhhccchhHHHHH----hhccCCceEeeecchhhccCCcccHHH
Confidence            665 5899999999997654  678899999999999999999887664    455667899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      +++|++++.|++.++    ..|+++++|+||++.++
T Consensus       158 aAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         158 APGNAYLDGLAQQRR----SDGLPATAVAWGTWAGS  189 (259)
T ss_dssp             HHHHHHHHHHHHHHH----HTTCCCEEEEECCBC--
T ss_pred             HHHHHhHHHHHHHHH----hCCCCEEECCCCcccCC
Confidence            999999998877665    45999999999998644

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=2.7e-30  Score=201.59  Aligned_cols=168  Identities=21%  Similarity=0.325  Sum_probs=128.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc-C
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY-G   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g   92 (214)
                      |+||||||++|||+++|++|+++|++|++++|+++.                    ..+|+++.+.......++..+. +
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------------~~~d~~~~~~~~~~~~~~~~~~~~   61 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------------VIADLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999987532                    2468888888888776665554 6


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-------------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-------------  159 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------------  159 (214)
                      .+|++++|||....         .+.|.....+|..+...+.+...+.+.+.......++++.....             
T Consensus        62 ~id~lv~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          62 GMDGLVLCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CCSEEEECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CCcEEEEcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhcc
Confidence            79999999997532         23378889999999999999999998877666666665543322             


Q ss_pred             ---------------CCCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccccccCC
Q 044923          160 ---------------GGVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGFLK  210 (214)
Q Consensus       160 ---------------~~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  210 (214)
                                     +.+...+|++||+|+++|+|+++.||+++|||||+|+||+++|++.+..+.
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  198 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ  198 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC
Confidence                           112334799999999999999999999999999999999999999876643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.88  E-value=1.8e-24  Score=161.33  Aligned_cols=156  Identities=15%  Similarity=0.191  Sum_probs=115.5

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +..+++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+.+....    ++.+..+|++|.+++++++  
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~--   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF----KVNVTAAETADDASRAEAV--   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH----TCCCEEEECCSHHHHHHHT--
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc----chhhhhhhcccHHHHHHHh--
Confidence            4568999999999999999999999999999999999999999988888887643    3567899999999887765  


Q ss_pred             HHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-CCCCc
Q 044923           87 AVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-GVTSH  165 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-~~~~~  165 (214)
                           +++|+||||||..      +...+.++|+..+++|+.+.++....+.+.+..... ....+++.....+ ..+..
T Consensus        91 -----~~iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~g~~  158 (191)
T d1luaa1          91 -----KGAHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATD-KGKEYGGKRAFGALGIGGL  158 (191)
T ss_dssp             -----TTCSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTC-EEEEETTEEEECHHHHHHH
T ss_pred             -----cCcCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhcc-CcEEecceEEEeccCcCcH
Confidence                 4899999999963      245689999999999998877654433332222211 1222222111111 12334


Q ss_pred             cchhhHHHHHHHHHH
Q 044923          166 AYTSSKHGVVGLMKN  180 (214)
Q Consensus       166 ~y~~sK~a~~~l~~~  180 (214)
                      .|+++|+++..++++
T Consensus       159 ~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         159 KLKLHRACIAKLFES  173 (191)
T ss_dssp             HHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhc
Confidence            699999998877653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=7.1e-20  Score=148.53  Aligned_cols=176  Identities=15%  Similarity=0.070  Sum_probs=127.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch--hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG--ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |+||||||||.||++++++|+++|++|+.++|.....  +..............++.++.+|++|.+++.++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            8999999999999999999999999999999854321  1111111111112236889999999999999999866    


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----C------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----G------  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----~------  160 (214)
                       .+|+++|.|+.....      .+.++....+++|+.|+..+++++...-. .+..++|++||.+.+-     +      
T Consensus        78 -~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~~  149 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETTP  149 (357)
T ss_dssp             -CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             -CCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCCC
Confidence             789999999986432      23345677899999999998887755432 2345799999865331     1      


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 ~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ..+...|+.+|.+.+.+++.++..+   |+++..+.|+.+..|.
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR  190 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence            1124579999999999999998764   7899999998887774

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=4e-18  Score=137.01  Aligned_cols=172  Identities=16%  Similarity=0.154  Sum_probs=128.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||||.||.+++++|+++|++|++++|.................  .++.++++|++|.+.+.++++..     ++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDIRNEALMTEILHDH-----AI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT--SCCEEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC--CCCEEEEeecCCHHHHHHHHhcc-----CC
Confidence            499999999999999999999999999987744333322222222111  25789999999999999888754     78


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC------------
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV------------  162 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------  162 (214)
                      |+|||.|+....      ..+.++....+++|+.|+..+++++...    +-.++|++||.+...+.+            
T Consensus        75 d~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  144 (338)
T d1udca_          75 DTVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_dssp             SEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             CEEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCC
Confidence            999999996421      1234456789999999999888877654    335699988866553221            


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          163 TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       163 ~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      ....|+.+|.+.+.+.+....+.  .++.+..+.|+.+..+..
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCT
T ss_pred             CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccC
Confidence            24589999999999998877763  478888888888877643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=1.7e-17  Score=135.73  Aligned_cols=176  Identities=14%  Similarity=0.044  Sum_probs=125.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecC----------------CcchhhHHHHhhccCCCCCCceEEEeeCCC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIK----------------DDLGESVCEDISSSSSSANGCSYVHCDVTK   76 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~----------------~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~   76 (214)
                      ||+||||||||.||.+++++|+++|++|++++.-                .....+..........  .++.++.+|++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~Dl~d   78 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDICD   78 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTTS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC--CCcEEEEccCCC
Confidence            6899999999999999999999999999988521                0111111112222111  257899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCC
Q 044923           77 EKDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVC  156 (214)
Q Consensus        77 ~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  156 (214)
                      .+.++++++..     ++|+|||.|+.....   ....+.+.....+++|+.|+..+.+.+...-.   ..++++.||..
T Consensus        79 ~~~l~~~~~~~-----~~d~ViHlAa~~~~~---~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~---~~~~i~~ss~~  147 (393)
T d1i24a_          79 FEFLAESFKSF-----EPDSVVHFGEQRSAP---YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE---ECHLVKLGTMG  147 (393)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCHH---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEECCGG
T ss_pred             HHHHHHHHHhh-----cchheeccccccccc---cccccccccccccccccccccHHHHHHHHhcc---ccceeeccccc
Confidence            99999998865     799999999975321   23345677888999999999988877654332   23466666644


Q ss_pred             cccC------------------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          157 GVIG------------------------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       157 ~~~~------------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ....                        ......|+.+|.+.+.+++.+..++   ++++..+.|+.+..+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            3311                        1122469999999999999888764   7899999988887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=1e-17  Score=135.04  Aligned_cols=172  Identities=15%  Similarity=0.197  Sum_probs=123.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |+||||||||.||++++++|+++|++|+++++......+..........  .++.++.+|++|.++++++++..     +
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK--HHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT--SCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc--cCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            7899999999999999999999999999987633221111111111111  25788999999999999888754     7


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC------------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG------------  161 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------  161 (214)
                      +|++||+|+.....      ...+.......+|+.++..+.+++..    .+..++|++||.+.+...            
T Consensus        75 ~d~VihlAa~~~~~------~~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~  144 (347)
T d1z45a2          75 IDSVIHFAGLKAVG------ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEE  144 (347)
T ss_dssp             CCEEEECCSCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTT
T ss_pred             CCEEEEcccccccc------ccccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccc
Confidence            99999999975321      12344577888999999988887754    333469999996654211            


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          162 ---VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       162 ---~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                         .....|+.+|.+.+.+.+.+.... ..++.+..+.|+.+..+
T Consensus       145 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         145 CPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence               123479999999999998887653 45778877777666544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=8.9e-18  Score=135.17  Aligned_cols=173  Identities=16%  Similarity=0.131  Sum_probs=127.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+||+||||||+|.||.+++++|.++|++|+.+.|+.++.+.+.......... .....+..|++|.+++.+++.     
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~-----   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-RFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTT-TEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccc-cccEEEeccccchhhhhhhcc-----
Confidence            46899999999999999999999999999999999876665554433322221 123456689999998877765     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-C-------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-V-------  162 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-~-------  162 (214)
                        .+|.++|+++....      ..+   ....+..|+.|+..+++.+...   .+..++|++||.+..... +       
T Consensus        83 --~~~~v~~~a~~~~~------~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          83 --GAAGVAHIASVVSF------SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             --TCSEEEECCCCCSC------CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             --cchhhhhhcccccc------ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccc
Confidence              78999999997531      223   3456778998888777766442   235679999996543211 1       


Q ss_pred             -----------------------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 -----------------------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 -----------------------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                                             ...+|+.+|.+.+.+++.+..+.. .++++..++|+.+..|.
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCC
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCC
Confidence                                   113699999999999999988764 47888899998887654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.75  E-value=8.1e-18  Score=136.50  Aligned_cols=175  Identities=19%  Similarity=0.186  Sum_probs=127.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +||||||+|.||++++++|+++|+.+++..++....... ..+.... ...++.++.+|++|.+.+.++++..     ++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-ESLSDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG-GGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH-HHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            489999999999999999999999855543322111111 1122211 1236889999999999999888754     79


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-----CCCeEEEecCCCcccCC--------
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-----GRGSIISTASVCGVIGG--------  161 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~g~iv~~sS~~~~~~~--------  161 (214)
                      |+|||+|+....      ..+.++...++++|+.|+..+.+.+.......     +..++|++||...+-..        
T Consensus        75 d~VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          75 DAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             SEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CEEEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence            999999996432      11344567899999999999999887765432     23579999996644211        


Q ss_pred             -------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 -------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 -------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                                   .....|+.+|.+.+.+++.+...+   |+.+..+.|+.+..|..
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~  202 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCC
Confidence                         123459999999999999998764   78999999999887753

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.5e-17  Score=131.50  Aligned_cols=173  Identities=15%  Similarity=0.032  Sum_probs=124.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc-----hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL-----GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      |+||||||+|.||++++++|.++|+.|+.++|....     .+.+.......  ...++.++.+|++|.+.+.+++... 
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH--IEGNMKLHYGDLTDSTCLVKIINEV-   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-----------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh--ccCCcEEEEeecCCchhhHHHHhhc-
Confidence            445999999999999999999999999999986432     22221111111  1135789999999999999998765 


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC--------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG--------  160 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------  160 (214)
                          +.+++++.++....      ....+.....+++|+.|+..+.+++...-.. +..++|++||.+.+-.        
T Consensus        79 ----~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E  147 (347)
T d1t2aa_          79 ----KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKE  147 (347)
T ss_dssp             ----CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             ----ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCC
Confidence                78899999886431      2234556677899999999888877665332 2347999998653311        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          161 ---GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       161 ---~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                         ..+...|+.||.+.+.+++.+...+   ++.+..+.|+.+..|
T Consensus       148 ~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         148 TTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  190 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence               1123579999999999999887764   788888888777765

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=5e-17  Score=130.10  Aligned_cols=176  Identities=16%  Similarity=0.042  Sum_probs=127.0

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-----chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-----LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .|++|||||||.||+++++.|+++|++|+.++|...     +.+.+.......  ....+.+..+|+++.+++.+.++..
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc--cccceEEEEccccCHHHHHHHHhhh
Confidence            389999999999999999999999999999998532     222222111111  1135778899999999999888754


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecCCCcccC------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTASVCGVIG------  160 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~------  160 (214)
                           ++|++||.|+.....      ...++....++.|+.+...+..++....... ...+++..||......      
T Consensus        79 -----~~D~Vih~Aa~~~~~------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~  147 (339)
T d1n7ha_          79 -----KPDEVYNLAAQSHVA------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQS  147 (339)
T ss_dssp             -----CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBC
T ss_pred             -----ccchhhhcccccccc------ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCC
Confidence                 899999999975321      2345677889999999998888776544332 2334566655443221      


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          161 ----GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       161 ----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                          ......|+.+|.+.+.++..+...+   |+.+..+.|+.+..|.
T Consensus       148 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         148 ETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR  192 (339)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCC
Confidence                1234589999999999999888764   7999999998887765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.73  E-value=9.2e-17  Score=129.35  Aligned_cols=176  Identities=17%  Similarity=0.104  Sum_probs=132.1

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++||+||||||||.||.++++.|+++|++|+.++|+........+.....    ..+.++.+|++|++.+.++++..   
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~----~~i~~~~~Dl~d~~~l~~~~~~~---   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA----DGMQSEIGDIRDQNKLLESIREF---   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTT----TTSEEEECCTTCHHHHHHHHHHH---
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcc----cCCeEEEeeccChHhhhhhhhhc---
Confidence            68999999999999999999999999999999999877665554443221    25889999999999999888765   


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC---------
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG---------  161 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  161 (214)
                        .+|+++|.|+....      ....+.....+++|+.++..+.+++...-.   ...+++.||.......         
T Consensus        79 --~~~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~  147 (356)
T d1rkxa_          79 --QPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHVGG---VKAVVNITSDKCYDNKEWIWGYREN  147 (356)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC---CCEEEEECCGGGBCCCCSSSCBCTT
T ss_pred             --hhhhhhhhhccccc------cccccCCccccccccccchhhhhhhhcccc---ccccccccccccccccccccccccc
Confidence              88999999996532      123455788999999999888877755322   2345555554433211         


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHc------cCCcEEEEEeCCcccCcc
Q 044923          162 ---VTSHAYTSSKHGVVGLMKNTAVELG------RFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ---~~~~~y~~sK~a~~~l~~~la~e~~------~~gi~v~~v~Pg~v~t~~  204 (214)
                         .....|+.+|.+.+.+.+.++.++.      ..++.+..+.|+.+..|.
T Consensus       148 ~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         148 EAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             SCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             cccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence               1234699999999999988887652      457888899998877654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=2e-16  Score=125.70  Aligned_cols=170  Identities=15%  Similarity=0.071  Sum_probs=122.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh-hHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE-SVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      |+||||||||.||++++++|.++|++|+.++|...... ...+.+..    ..++.++.+|++|.+++.+.+...     
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~-----   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI----EGDIQYEDGDMADACSVQRAVIKA-----   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC----GGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc----cCCcEEEEccccChHHhhhhhccc-----
Confidence            78999999999999999999999999999988654322 11122211    125789999999999998888765     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCccc-----------CC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVI-----------GG  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~  161 (214)
                      ..++++++|+.....      ...++....++.|+.|+..+..++...-.+   .++++.||..-..           +.
T Consensus        72 ~~~~~~~~a~~~~~~------~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~E~~~~  142 (321)
T d1rpna_          72 QPQEVYNLAAQSFVG------ASWNQPVTTGVVDGLGVTHLLEAIRQFSPE---TRFYQASTSEMFGLIQAERQDENTPF  142 (321)
T ss_dssp             CCSEEEECCSCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHHHCTT---SEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             ccccccccccccccc------ccccchHHHHhhhhhchHHHHHHHHHhCCC---cccccccchhhcCcccCCCCCCCCCc
Confidence            678888888764321      112335778899999999887776553322   3466666643221           11


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .....|+.+|.+.+.+++.+..++   ++++..+.|+.+..|.
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         143 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  182 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             cccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence            133689999999999999998774   6888888887777664

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.2e-16  Score=117.23  Aligned_cols=151  Identities=18%  Similarity=0.166  Sum_probs=105.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ..|+++||||||+||++++++|+++|++|.++.|+.++++...         ...+.++.+|++|.+++.++++      
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG---------PRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS---------CCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc---------ccccccccccccchhhHHHHhc------
Confidence            4588999999999999999999999999999999876643221         1257889999999999888876      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC----ccc
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS----HAY  167 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----~~y  167 (214)
                       +.|++|+++|...+..  ..           +++..    .++.+++.+++.+..++|++||.......+..    ..|
T Consensus        67 -~~d~vi~~~g~~~~~~--~~-----------~~~~~----~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~  128 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDLS--PT-----------TVMSE----GARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAV  128 (205)
T ss_dssp             -TCSEEEECCCCTTCCS--CC-----------CHHHH----HHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHH
T ss_pred             -CCCEEEEEeccCCchh--hh-----------hhhHH----HHHHHHHHHHhcCCCeEEEEeeeeccCCCcccccccccc
Confidence             7899999999753221  11           12222    23344555666667789999997655433222    234


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccC
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSS  202 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t  202 (214)
                      ...|...+.+       +...|++...|.||.+..
T Consensus       129 ~~~~~~~e~~-------l~~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_         129 TDDHIRMHKV-------LRESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHHHHHHH-------HHHTCSEEEEECCSEEEC
T ss_pred             chHHHHHHHH-------HHhcCCceEEEecceecC
Confidence            4444443332       334689999999998853

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=2.2e-16  Score=125.15  Aligned_cols=153  Identities=15%  Similarity=0.196  Sum_probs=117.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .|++|||||||.||++++++|+++|+.++++.+..                       .+|++|.+.+.++++.-     
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-----------------------~~~~~~~~~~~~~~~~~-----   53 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASE-----   53 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-----------------------hccccCHHHHHHHHhhc-----
Confidence            47899999999999999999999999988765432                       15899999988887643     


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  161 (214)
                      .+|.++|+|+.....     .....+....+++|+.++..+++++..    .+-.++|++||.+.+.+.           
T Consensus        54 ~~d~v~~~a~~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~  124 (315)
T d1e6ua_          54 RIDQVYLAAAKVGGI-----VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELL  124 (315)
T ss_dssp             CCSEEEECCCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTT
T ss_pred             CCCEEEEcchhcccc-----ccchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccc
Confidence            789999999865321     112344566788999888887776644    334579999997765321           


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 -----VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 -----~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                           +...+|+.+|.+.+.+++.+..+.   |+++..+.|+.+..|..
T Consensus       125 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         125 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence                 112369999999999999998764   79999999999887653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8e-16  Score=123.57  Aligned_cols=172  Identities=13%  Similarity=0.129  Sum_probs=122.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEec------CCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADI------KDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r------~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      |+||||||+|.||.+++++|+++|++|+.+++      +.....+..+.+.....  .++.++.+|++|.+.+.+++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcC--CCcEEEEeecccccccccccccc
Confidence            67899999999999999999999999998864      22222222222222222  25789999999999998887653


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC------
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG------  161 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  161 (214)
                           .+|+++|.|+....      ..+.++....+++|+.++..+.+++..    .+-.+++++||.......      
T Consensus        81 -----~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             -----CEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             -----ccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeecccccccc
Confidence                 78899999997532      123445678899999888877766543    444568888876544321      


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 ------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                            ....+|+.+|.+.+...+.++..  ..++....+.|+.+..+.
T Consensus       146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~  192 (346)
T d1ek6a_         146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAH  192 (346)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCC
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccC
Confidence                  12347999999999888887653  357888888887776653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=3.8e-16  Score=125.29  Aligned_cols=173  Identities=19%  Similarity=0.080  Sum_probs=125.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC--CCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS--SSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +-|++|||||||.||++++++|.++|++|+.++|....-......+....  ....++.++.+|..|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            44899999999999999999999999999999863321111111111110  001257889999999887665544    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC--------
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--------  161 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------  161 (214)
                         ..+.+++.++....      ....++....+++|+.|+..+.+++..    .+..++|++||...+...        
T Consensus        91 ---~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             ---TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ---cccccccccccccc------cccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccCC
Confidence               67888888875421      124566788999999999998887754    334579999997654321        


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 ---VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ---~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                         .....|+.+|.+.+.+++.+....   ++++..+.|+.+..+.
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence               123689999999999999998765   6888888888877654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=4.9e-16  Score=125.62  Aligned_cols=166  Identities=20%  Similarity=0.165  Sum_probs=123.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.+||||||+|.||++++++|.++|++|+++++......  ....       ....+..+|+.+.+.+.++++      
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--~~~~-------~~~~~~~~D~~~~~~~~~~~~------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--TEDM-------FCDEFHLVDLRVMENCLKVTE------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--CGGG-------TCSEEEECCTTSHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--hhhc-------ccCcEEEeechhHHHHHHHhh------
Confidence            4666999999999999999999999999999876543210  0111       135778899999988776665      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC----------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG----------  161 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------  161 (214)
                       ++|.+||.|+.....     ....+.....+.+|+.++..++.++..    .+..++|++||.......          
T Consensus        79 -~~d~Vih~a~~~~~~-----~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~  148 (363)
T d2c5aa1          79 -GVDHVFNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSL  148 (363)
T ss_dssp             -TCSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEE
T ss_pred             -cCCeEeecccccccc-----cccccccccccccccchhhHHHHhHHh----hCcccccccccccccccccccccccccc
Confidence             789999999876432     111234677888899888877776644    344579999997665421          


Q ss_pred             --------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          162 --------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       162 --------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                              .....|+.+|.+.+.+++.+..++   |+++..+.|+.+..+..
T Consensus       149 ~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~  197 (363)
T d2c5aa1         149 KESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  197 (363)
T ss_dssp             CGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             ccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCC
Confidence                    123479999999999999888764   79999999999887653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.67  E-value=1.9e-15  Score=120.38  Aligned_cols=153  Identities=22%  Similarity=0.240  Sum_probs=109.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch-hhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG-ESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +||||||+|.||++++++|+++|++|+++++-.... .+....+...    .++.++.+|++|.+++.++++..     +
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~----~~~~~i~~Di~~~~~l~~~~~~~-----~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKY-----M   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc----CCcEEEEcccCCHHHHHHHHHhc-----C
Confidence            589999999999999999999999999886532221 1111222221    25789999999999999988765     7


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  162 (214)
                      +|++||+|+.....      ...++....+++|+.|+..+++++...    +..+.++.||.....+.+           
T Consensus        73 ~d~Vih~aa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          73 PDSCFHLAGQVAMT------TSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             CSEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             CceEEeeccccccc------ccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccccccccc
Confidence            89999999975321      123456889999999999888766543    333455555544433221           


Q ss_pred             -----------------CCccchhhHHHHHHHHHHHHHHHc
Q 044923          163 -----------------TSHAYTSSKHGVVGLMKNTAVELG  186 (214)
Q Consensus       163 -----------------~~~~y~~sK~a~~~l~~~la~e~~  186 (214)
                                       ....|+.+|...+.+.......+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence                             234689999999999888888763

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.8e-17  Score=129.30  Aligned_cols=162  Identities=19%  Similarity=0.174  Sum_probs=113.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc-chhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD-LGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .|++|||||+|.||++++++|.++|++|+.++|... ..+.+. ...    ....+.+...|+.+.     +       +
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~~----~~~~~d~~~~~~~~~-----~-------~   63 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-HWI----GHENFELINHDVVEP-----L-------Y   63 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-GGT----TCTTEEEEECCTTSC-----C-------C
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-Hhc----CCCceEEEehHHHHH-----H-------H
Confidence            378999999999999999999999999999886432 222221 111    112344455555332     1       2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------  160 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  160 (214)
                      .++|+|||+|+......      ..++....+++|+.++..+++++...    + .++|++||.+.+..           
T Consensus        64 ~~~d~VihlAa~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~vy~~~~~~~~~e~~~  132 (312)
T d2b69a1          64 IEVDQIYHLASPASPPN------YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYW  132 (312)
T ss_dssp             CCCSEEEECCSCCSHHH------HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             cCCCEEEECcccCCchh------HHhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChheecCCCCCCCCcccc
Confidence            37999999999754210      11235678899999998888776442    2 36999988654421           


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          161 -----GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       161 -----~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                           ......|+.+|.+.+.+++.++.++   |+++..+.|+.+..|..
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence                 1123579999999999999998874   79999999999988654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=5.7e-16  Score=124.54  Aligned_cols=169  Identities=15%  Similarity=0.129  Sum_probs=117.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .|+||||||||.||++++++|.++|+.|.++.++.-........+....  ..++.++.+|++|.+.+.+++.       
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~--~~~i~~~~~Di~d~~~~~~~~~-------   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAA-------   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHT-------
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh--cCCeEEEEccCCCHHHHHHHHh-------
Confidence            4789999999999999999999999875444432110000011111111  1368899999999999988876       


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  161 (214)
                      ..|.++|.|+.....      ...++....+++|+.|+..+...+...-     .++|++||...+...           
T Consensus        73 ~~~~v~~~a~~~~~~------~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~vyg~~~~~~~~~~~~~  141 (346)
T d1oc2a_          73 KADAIVHYAAESHND------NSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEVYGDLPLREDLPGHGE  141 (346)
T ss_dssp             TCSEEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGGCCBCCGGGSTTTTC
T ss_pred             hhhhhhhhhhccccc------chhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceEecccCcccccccccc
Confidence            678899999875321      1233456788999999998887665432     246666665433110           


Q ss_pred             ------------CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 ------------VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ------------~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                                  .....|+.+|.+.+.+++.+..++   |+++..+.|+.+..|.
T Consensus       142 ~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         142 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPY  193 (346)
T ss_dssp             STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTT
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCC
Confidence                        112469999999999999888764   8999999999888764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=2.2e-15  Score=120.73  Aligned_cols=166  Identities=14%  Similarity=0.120  Sum_probs=119.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++|||||||.||++++++|+++| +.|+.+++.....+...+        ..++.++++|+++.+++.+.+.   +   +
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--------~~~~~~i~~Di~~~~~~~~~~~---~---~   67 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--------HPHFHFVEGDISIHSEWIEYHV---K---K   67 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--------CTTEEEEECCTTTCSHHHHHHH---H---H
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--------CCCeEEEECccCChHHHHHHHH---h---C
Confidence            48999999999999999999998 578888776543332221        1368999999999877655332   1   5


Q ss_pred             ccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-----------
Q 044923           94 LDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-----------  162 (214)
Q Consensus        94 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  162 (214)
                      +|+|||+|+.....      ...++....+++|+.|+..+.+.+...    + .+.++.||.......+           
T Consensus        68 ~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~gt~~ll~~~~~~----~-~~~~~~ss~~~~~~~~~~~~~~~~~~~  136 (342)
T d2blla1          68 CDVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHSNL  136 (342)
T ss_dssp             CSEEEECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCCSSBCTTTCCC
T ss_pred             CCcccccccccccc------ccccCCccccccccccccccccccccc----c-ccccccccccccccccccccccccccc
Confidence            89999999975421      123445678999999999888876442    2 3456666655433211           


Q ss_pred             -------CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccccc
Q 044923          163 -------TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAKGF  208 (214)
Q Consensus       163 -------~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (214)
                             ....|+.+|.+.+.+++.+...+   |+++..+.|..+..+.....
T Consensus       137 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~  186 (342)
T d2blla1         137 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNL  186 (342)
T ss_dssp             BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCT
T ss_pred             cccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeecccccccccccc
Confidence                   12469999999999999998774   78899998888887654433

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.62  E-value=2.2e-14  Score=116.66  Aligned_cols=177  Identities=18%  Similarity=0.217  Sum_probs=124.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHH-cCCeEEEEec---------CCcchhhHHHHhhccC-----CCCCCceEEEeeCCCH
Q 044923           13 GKVALITGGAGSIGECAARLFSK-HGAKVLIADI---------KDDLGESVCEDISSSS-----SSANGCSYVHCDVTKE   77 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~-~g~~vi~~~r---------~~~~~~~~~~~~~~~~-----~~~~~v~~~~~D~~~~   77 (214)
                      +.+||||||+|.||++++++|++ .|++|+++++         ..+..+.....+....     .....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34699999999999999999986 6899998864         1122223222222211     1123467889999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCG  157 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  157 (214)
                      +.++++++.    ..++|+|+|.|+.....      ...+.....+++|+.++..++.++..    .+..++++++|...
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~~------~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             HHhhhhhhc----cceeehhhccccccccc------ccccccccccccccccccccchhhhc----cCCccccccccccc
Confidence            988888764    45789999999975421      12344667888999888887766654    33445777666554


Q ss_pred             ccC------------------CCCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcccc
Q 044923          158 VIG------------------GVTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMAK  206 (214)
Q Consensus       158 ~~~------------------~~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  206 (214)
                      ...                  ......|+.+|.+.+.+++.+...   .|+.+.++.|+.+..|...
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTT
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCcc
Confidence            321                  112467999999999999998876   4799999999988776544

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.4e-15  Score=114.48  Aligned_cols=157  Identities=18%  Similarity=0.163  Sum_probs=112.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++|++|||||||.||++++++|.++|.  +|+++.|++........         ..+....+|+.+.+++.+.++  
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~---------~~i~~~~~D~~~~~~~~~~~~--   79 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEVVDFEKLDDYASAFQ--   79 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG---------GGCEEEECCGGGGGGGGGGGS--
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc---------ceeeeeeeccccccccccccc--
Confidence            46789999999999999999999999995  69999987654322111         145667788887766654444  


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                           +.|++||++|...         .........++|+.++..+.+++.    +.+-.++|++|+.....  .....|
T Consensus        80 -----~~d~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~fi~~Ss~~~~~--~~~~~Y  139 (232)
T d2bkaa1          80 -----GHDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADK--SSNFLY  139 (232)
T ss_dssp             -----SCSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHH
T ss_pred             -----ccccccccccccc---------cccchhhhhhhcccccceeeeccc----ccCccccccCCcccccc--Cccchh
Confidence                 7899999998542         234566778889887777766653    45556799999977653  234579


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCc-EEEEEeCCcccCcc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGI-RVNCVSPYAVSSPM  204 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi-~v~~v~Pg~v~t~~  204 (214)
                      +.+|...+...+.       .|. ++..+.||.+..+.
T Consensus       140 ~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1         140 LQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             HHHHHHHHHHHHT-------TCCSEEEEEECCEEECTT
T ss_pred             HHHHHHhhhcccc-------ccccceEEecCceeecCC
Confidence            9999887754432       233 57778999998764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.58  E-value=1.5e-14  Score=115.00  Aligned_cols=167  Identities=19%  Similarity=0.191  Sum_probs=119.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeE------EEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKV------LIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~v------i~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++|||||||.||+++++.|+++|+.|      +..++.......  ..+.... ...++.++..|.++.........   
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~---   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVD-ADPRLRFVHGDIRDAGLLARELR---   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGT-TCTTEEEEECCTTCHHHHHHHTT---
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhh-cCCCeEEEEeccccchhhhcccc---
Confidence            48999999999999999999999754      333322111111  1111111 12368899999999887765544   


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC------
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV------  162 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  162 (214)
                          ..|.++|.|+....      ....+.....+++|+.++..+.+++..    .+..++|++||.+.+.+..      
T Consensus        76 ----~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E  141 (322)
T d1r6da_          76 ----GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTE  141 (322)
T ss_dssp             ----TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred             ----ccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCC
Confidence                78999999987532      123445677889999999988877754    3345799999976654321      


Q ss_pred             -----CCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          163 -----TSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       163 -----~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                           ....|+.+|.+.+.+++.++.++   |+++..+.|+.+..|.
T Consensus       142 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~  185 (322)
T d1r6da_         142 SSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPY  185 (322)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcC
Confidence                 23589999999999999998764   7999999999998764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=4e-14  Score=107.07  Aligned_cols=167  Identities=14%  Similarity=0.056  Sum_probs=110.4

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCe--EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAK--VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~--vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++||||||||+||+++++.|+++|++  |+...|+++..+.    +.      .++.++.+|+++.+++.++++      
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~~------~~~~~~~~d~~~~~~~~~~~~------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IG------GEADVFIGDITDADSINPAFQ------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TT------CCTTEEECCTTSHHHHHHHHT------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----cc------CCcEEEEeeeccccccccccc------
Confidence            78999999999999999999999976  5556676543221    11      257889999999999888776      


Q ss_pred             CCccEEEeCCcccCCCCCC-------CCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           92 GKLDIMFNNAGIVDEAKPN-------ILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~-------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                       ++|.+||+|+........       ........+.....+|+.+...+........    .+...+.++.....+....
T Consensus        68 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~  142 (252)
T d2q46a1          68 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPDHPL  142 (252)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTTCGG
T ss_pred             -cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCCccc
Confidence             789999999876432110       1111123355667788888777666554433    4567777776665554433


Q ss_pred             ccchhhHHH-HHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          165 HAYTSSKHG-VVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       165 ~~y~~sK~a-~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      ..+..++.. .......+.   ...|+++..+.||.+..+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         143 NKLGNGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             GGGGGCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSC
T ss_pred             ccccccchhhhhhhhhhhh---hcccccceeecceEEECCC
Confidence            333333332 222223332   2368999999999987664

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.31  E-value=1.4e-11  Score=95.24  Aligned_cols=142  Identities=19%  Similarity=0.225  Sum_probs=98.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||||.||++++++|.++|++|+.++|+.                        +|++|.+++.++++..     ++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------------~D~~d~~~~~~~l~~~-----~~   53 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------------LDITNVLAVNKFFNEK-----KP   53 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------------ccCCCHHHHHHHHHHc-----CC
Confidence            489999999999999999999999999887642                        4899999998888755     78


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC-----------CCC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG-----------GVT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~  163 (214)
                      |++||+|+....      +.........+..|+.....+........     ..+++.||......           ...
T Consensus        54 d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-----~~~~~~ss~~v~~~~~~~~~~e~~~~~~  122 (281)
T d1vl0a_          54 NVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSVG-----AEIVQISTDYVFDGEAKEPITEFDEVNP  122 (281)
T ss_dssp             SEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             CEEEeecccccc------ccccccchhhccccccccccccccccccc-----ccccccccceeeeccccccccccccccc
Confidence            999999987532      11233456677778776666655544422     23555555432221           123


Q ss_pred             CccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          164 SHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ...|+.+|...+.+.+.       .+.+...+.|+.+..+
T Consensus       123 ~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         123 QSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGD  155 (281)
T ss_dssp             CSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESS
T ss_pred             hhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCC
Confidence            34678888776655432       2566777888888654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.31  E-value=4.1e-11  Score=92.97  Aligned_cols=156  Identities=16%  Similarity=0.172  Sum_probs=99.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHH--HhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE--DISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|++|||||||.||++++++|.++|++|+++.|+.........  .+.....  ..+.++.+|+.+.....+.++     
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc--CCcEEEEeecccchhhhhhhh-----
Confidence            5789999999999999999999999999999987654432221  1111111  247888999999998887776     


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhh
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSS  170 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  170 (214)
                        ..+.++++++.....                     +...+.++.    ...+...+++.||............+...
T Consensus        76 --~~~~vi~~~~~~~~~---------------------~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          76 --NVDVVISTVGSLQIE---------------------SQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             --TCSEEEECCCGGGSG---------------------GGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             --hceeeeecccccccc---------------------hhhHHHHHH----HHhccccceeeeccccccccccccccccc
Confidence              678999988754211                     111222222    22234457777776554444444444444


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCccc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPMA  205 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  205 (214)
                      +.......+....+   .|++...+.|+.+..+..
T Consensus       129 ~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~  160 (307)
T d1qyca_         129 VFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFL  160 (307)
T ss_dssp             HHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHT
T ss_pred             cccccccccchhhc---cCCCceecccceecCCCc
Confidence            44433333333333   477888899988876543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.30  E-value=3.8e-11  Score=93.70  Aligned_cols=159  Identities=11%  Similarity=0.041  Sum_probs=97.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH-HHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV-CEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++||||||||.||++++++|.++|++|+++.|+....... .+.+.....  .++.++.+|++|.+++.+.+.      
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~--~~v~~v~~d~~d~~~~~~~~~------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--LGAKLIEASLDDHQRLVDALK------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT--TTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc--CCcEEEEeecccchhhhhhcc------
Confidence            35599999999999999999999999999999875433211 111111111  257889999999998887766      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCC-CCccchhh
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGV-TSHAYTSS  170 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-~~~~y~~s  170 (214)
                       ..+.++++++.....                 .|..+...+...+    .+.+..++++.||.+.....+ ....|...
T Consensus        75 -~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~  132 (312)
T d1qyda_          75 -QVDVVISALAGGVLS-----------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSI  132 (312)
T ss_dssp             -TCSEEEECCCCSSSS-----------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTH
T ss_pred             -Ccchhhhhhhhcccc-----------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhh
Confidence             678899888754211                 1222222333332    333345677777755443222 12233344


Q ss_pred             HHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          171 KHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       171 K~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +.......+.+..   ..|+....+.|+.+..+.
T Consensus       133 ~~~~~~~~~~~~~---~~~~~~~i~r~~~~~g~~  163 (312)
T d1qyda_         133 TFIDKRKVRRAIE---AASIPYTYVSSNMFAGYF  163 (312)
T ss_dssp             HHHHHHHHHHHHH---HTTCCBCEEECCEEHHHH
T ss_pred             hhHHHHHHHHhhc---ccccceEEeccceeecCC
Confidence            4433333333332   357888888898886543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.30  E-value=4e-12  Score=94.82  Aligned_cols=148  Identities=17%  Similarity=0.146  Sum_probs=98.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      |++|||||||.||++++++|.++|+  +|++..|++...                ...+..+..|..++..      ...
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------------~~~~~~~~~d~~~~~~------~~~   60 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------------HPRLDNPVGPLAELLP------QLD   60 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------------CTTEECCBSCHHHHGG------GCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------------cccccccccchhhhhh------ccc
Confidence            8999999999999999999999997  566666653210                1113344445433221      123


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchhhH
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTSSK  171 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK  171 (214)
                      +.+|.+|+++|.....        ...-....+.|+.++..+++++    ++.+..+++++||.++..  .....|..+|
T Consensus        61 ~~~d~vi~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K  126 (212)
T d2a35a1          61 GSIDTAFCCLGTTIKE--------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNRVK  126 (212)
T ss_dssp             SCCSEEEECCCCCHHH--------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHH
T ss_pred             cchheeeeeeeeeccc--------cccccccccchhhhhhhccccc----cccccccccccccccccc--ccccchhHHH
Confidence            5789999999865211        1113466778887777776655    445556799999977653  3346799999


Q ss_pred             HHHHHHHHHHHHHHccCCc-EEEEEeCCcccCcc
Q 044923          172 HGVVGLMKNTAVELGRFGI-RVNCVSPYAVSSPM  204 (214)
Q Consensus       172 ~a~~~l~~~la~e~~~~gi-~v~~v~Pg~v~t~~  204 (214)
                      ...+.+.+       ..+. +...+.|+.+..+.
T Consensus       127 ~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1         127 GELEQALQ-------EQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             HHHHHHHT-------TSCCSEEEEEECCSEESTT
T ss_pred             HHHhhhcc-------ccccccceeeCCcceeCCc
Confidence            87765443       2343 57788999987654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.26  E-value=8.4e-12  Score=97.01  Aligned_cols=129  Identities=17%  Similarity=0.186  Sum_probs=88.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      ++|||||||.||+++++.|.++|..|.+ .++...                    +.+|++|.+.+.++++..     ++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~--------------------~~~Dl~~~~~~~~~i~~~-----~~   55 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE--------------------FCGDFSNPKGVAETVRKL-----RP   55 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS--------------------SCCCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc--------------------ccCcCCCHHHHHHHHHHc-----CC
Confidence            4999999999999999999998865444 433211                    236999999999888765     78


Q ss_pred             cEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------CC
Q 044923           95 DIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------VT  163 (214)
Q Consensus        95 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~  163 (214)
                      |+|||+||......      ..+.....+++|+.+...+..++    ++. ..+++++||.....+.           ..
T Consensus        56 D~Vih~Aa~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p  124 (298)
T d1n2sa_          56 DVIVNAAAHTAVDK------AESEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSP  124 (298)
T ss_dssp             SEEEECCCCCCHHH------HTTCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCC
T ss_pred             CEEEEecccccccc------cccCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCC
Confidence            99999999753211      12234677888887777766655    333 3467777775544321           12


Q ss_pred             CccchhhHHHHHHHHHH
Q 044923          164 SHAYTSSKHGVVGLMKN  180 (214)
Q Consensus       164 ~~~y~~sK~a~~~l~~~  180 (214)
                      ...|+.+|.+.+.+.+.
T Consensus       125 ~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         125 LNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             SSHHHHHHHHHHHHHHH
T ss_pred             CchHhhhhhhhhhhHHh
Confidence            34789999887765543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.25  E-value=1.3e-10  Score=92.83  Aligned_cols=151  Identities=13%  Similarity=0.053  Sum_probs=96.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH-HHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD-IENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~   90 (214)
                      +.|+++||||||.||.+++++|.++|++|+++.|+.+....  ..+...    ..+.++++|++|..+ ++.++      
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~----~~v~~~~gD~~d~~~~~~~a~------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI----PNVTLFQGPLLNNVPLMDTLF------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS----TTEEEEESCCTTCHHHHHHHH------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc----CCCEEEEeeCCCcHHHHHHHh------
Confidence            46999999999999999999999999999999998765432  222221    257899999999654 33333      


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC--CCCccch
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG--VTSHAYT  168 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~~~~y~  168 (214)
                       ...|.++.+......        .          ++.....++.+    ..+.+..+++..||.......  .....|.
T Consensus        70 -~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~a----a~~agv~~~v~~Ss~~~~~~~~~~~~~~~~  126 (350)
T d1xgka_          70 -EGAHLAFINTTSQAG--------D----------EIAIGKDLADA----AKRAGTIQHYIYSSMPDHSLYGPWPAVPMW  126 (350)
T ss_dssp             -TTCSEEEECCCSTTS--------C----------HHHHHHHHHHH----HHHHSCCSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             -cCCceEEeecccccc--------h----------hhhhhhHHHHH----HHHhCCCceEEEeeccccccCCcccchhhh
Confidence             377888777553211        1          11111222222    233344567777776654433  2345677


Q ss_pred             hhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          169 SSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       169 ~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      .+|...+.+.+       ..++....+.|+.+....
T Consensus       127 ~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         127 APKFTVENYVR-------QLGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HHHHHHHHHHH-------TSSSCEEEEEECEEGGGC
T ss_pred             hhHHHHHHHHH-------hhccCceeeeeceeeccc
Confidence            77876554433       235777888888766543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.23  E-value=5e-16  Score=114.79  Aligned_cols=172  Identities=10%  Similarity=0.069  Sum_probs=96.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCc-----------eEEEeeCCCHHHHHHHH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGC-----------SYVHCDVTKEKDIENAV   84 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~D~~~~~~~~~~~   84 (214)
                      +.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++..........           .............. ..
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   81 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAID-TA   81 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHH-HH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccch-HH
Confidence            5677888999999999999999999999999999988888876543211100           01111111111122 11


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCC
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTS  164 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  164 (214)
                      .....................               .....+..+...+.+...+.+........+++.|..........
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (212)
T d1jaya_          82 RDLKNILREKIVVSPLVPVSR---------------GAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFANLDEK  146 (212)
T ss_dssp             HHTHHHHTTSEEEECCCCEEC---------------CTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHCTTCC
T ss_pred             HHhhhhhcccccccccccccc---------------ccccccccccchhhhhhhhhhhhhcccccceeecHHHhcCcccc
Confidence            111111111111211111111               11111111111222333444444433334444454444455566


Q ss_pred             ccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          165 HAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       165 ~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                      ..|...+++....++..+.++..+++.+++++||.+.+.
T Consensus       147 ~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a  185 (212)
T d1jaya_         147 FDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS  185 (212)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred             cCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence            678888888888888888887777888999999998854

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.12  E-value=8.9e-10  Score=85.51  Aligned_cols=159  Identities=16%  Similarity=0.214  Sum_probs=96.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH--HcC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS--QYG   92 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~~g   92 (214)
                      ||||||+|.||++++++|+++|++ |+++++-.. .........          ...+|..+.+.   ..+....  .+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~-~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-GTKFVNLVD----------LNIADYMDKED---FLIQIMAGEEFG   67 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-GGGGHHHHT----------SCCSEEEEHHH---HHHHHHTTCCCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCC-cchhhcccc----------cchhhhccchH---HHHHHhhhhccc
Confidence            799999999999999999999974 777653222 112211111          11133333332   2333322  335


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCC-----------
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGG-----------  161 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  161 (214)
                      .++.++|.|+.....     ..+   .....+.|+.+...+.......-    . .+++.||.....+.           
T Consensus        68 ~~~~i~~~aa~~~~~-----~~~---~~~~~~~~~~~~~~~l~~~~~~~----i-~~v~~ss~~~~~~~~~~~~~~~~~~  134 (307)
T d1eq2a_          68 DVEAIFHEGACSSTT-----EWD---GKYMMDNNYQYSKELLHYCLERE----I-PFLYASSAATYGGRTSDFIESREYE  134 (307)
T ss_dssp             SCCEEEECCSCCCTT-----CCC---HHHHHHHTHHHHHHHHHHHHHHT----C-CEEEEEEGGGGTTCCSCBCSSGGGC
T ss_pred             chhhhhhhccccccc-----ccc---ccccccccccccccccccccccc----c-ccccccccccccccccccccccccc
Confidence            788999999864322     222   24456667766666665544332    2 25555554444321           


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCcc
Q 044923          162 VTSHAYTSSKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSPM  204 (214)
Q Consensus       162 ~~~~~y~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  204 (214)
                      +....|+.+|.+.+.+++.+..+   .++.+..+.|..+..|.
T Consensus       135 ~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         135 KPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR  174 (307)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred             ccccccccccchhhhhccccccc---cccccccccceeEeecc
Confidence            23468999999999999888765   46788888887776653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=8.2e-07  Score=63.93  Aligned_cols=87  Identities=15%  Similarity=0.257  Sum_probs=65.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++++|+|+|.|+ ||.|++++..|++.|.+ +.+..|+.+..++.....+.... .........|+.+.+++.+...  
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhc--
Confidence            3689999999999 69999999999999985 88888988777665443322111 1134566789999887776655  


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                           ..|++||+....
T Consensus        90 -----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -----SADILTNGTKVG  101 (182)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----ccceeccccCCc
Confidence                 789999998764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.30  E-value=9.4e-06  Score=57.30  Aligned_cols=83  Identities=18%  Similarity=0.182  Sum_probs=57.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -.|.+++|+| +|+||...++.+...|++|+++++++++++...+. .   .   . ..+..|-. .++.....+.+.+.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~-g---a---~-~~~~~~~~-~~~~~~~~~~~~~~   94 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC-G---A---D-VTLVVDPA-KEEESSIIERIRSA   94 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-T---C---S-EEEECCTT-TSCHHHHHHHHHHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc-C---C---c-EEEecccc-ccccchhhhhhhcc
Confidence            3578899997 68999999999989999999999988776444332 1   1   1 12222322 23345555666666


Q ss_pred             cC-CccEEEeCCcc
Q 044923           91 YG-KLDIMFNNAGI  103 (214)
Q Consensus        91 ~g-~id~li~~ag~  103 (214)
                      .| .+|++|.++|.
T Consensus        95 ~g~g~D~vid~~g~  108 (170)
T d1e3ja2          95 IGDLPNVTIDCSGN  108 (170)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cccCCceeeecCCC
Confidence            54 69999999984

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.24  E-value=2.2e-06  Score=60.87  Aligned_cols=75  Identities=17%  Similarity=0.272  Sum_probs=55.1

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      .|+++|.|| |.+|+.+|+.|+++|++|++..|+.++++++.+.+.       .......+..+.......+.       
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~-------~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-------HSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT-------TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc-------ccccccccccchhhhHhhhh-------
Confidence            689999987 999999999999999999999999988777665432       23344456666555555544       


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      ..|.++....
T Consensus        67 ~~~~~i~~~~   76 (182)
T d1e5qa1          67 KHDLVISLIP   76 (182)
T ss_dssp             TSSEEEECSC
T ss_pred             ccceeEeecc
Confidence            5566665543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.24  E-value=1e-06  Score=63.31  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=55.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||+||+|...++.....|++|+.+.+++++.+..++.    ..   .   ...|-.+++..+.+.+..  .
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~----Ga---~---~vi~~~~~~~~~~~~~~~--~   95 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GF---D---AAFNYKTVNSLEEALKKA--S   95 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC---S---EEEETTSCSCHHHHHHHH--C
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh----hh---h---hhcccccccHHHHHHHHh--h
Confidence            3689999999999999999999999999999999887655443332    11   1   123444444443333221  2


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      .+.+|+++++.|
T Consensus        96 ~~Gvd~v~D~vG  107 (182)
T d1v3va2          96 PDGYDCYFDNVG  107 (182)
T ss_dssp             TTCEEEEEESSC
T ss_pred             cCCCceeEEecC
Confidence            247999999998

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.23  E-value=2.8e-06  Score=60.75  Aligned_cols=105  Identities=13%  Similarity=0.141  Sum_probs=67.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH-
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS-   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-   89 (214)
                      .+|.++||+||+||+|....+.....|++|+.+.+++++.+...+ +..      . ..  .|-.+.  ..+.   +.. 
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-lGa------~-~v--i~~~~~--~~~~---~~~~   94 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA------K-EV--LAREDV--MAER---IRPL   94 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC------S-EE--EECC--------------C
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-ccc------c-ee--eecchh--HHHH---HHHh
Confidence            458999999999999999999888999999999998887655433 211      1 11  232221  1111   112 


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIG  160 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  160 (214)
                      .-+++|+++.+.|-..             |               ...+..++.  .|+++.++...+..+
T Consensus        95 ~~~gvD~vid~vgg~~-------------~---------------~~~l~~l~~--~Griv~~G~~~g~~~  135 (176)
T d1xa0a2          95 DKQRWAAAVDPVGGRT-------------L---------------ATVLSRMRY--GGAVAVSGLTGGAEV  135 (176)
T ss_dssp             CSCCEEEEEECSTTTT-------------H---------------HHHHHTEEE--EEEEEECSCCSSSCC
T ss_pred             hccCcCEEEEcCCchh-------------H---------------HHHHHHhCC--CceEEEeecccCccc
Confidence            2247999999988321             1               234455555  488999988766653

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.22  E-value=2.9e-06  Score=59.62  Aligned_cols=75  Identities=17%  Similarity=0.390  Sum_probs=57.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++++++++|.|+ |++|..+++.|...|+. +.++.|+.++.+++.+.+..        ..     .+.+++.+.+.   
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~--------~~-----~~~~~~~~~l~---   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG--------EA-----VRFDELVDHLA---   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC--------EE-----CCGGGHHHHHH---
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc--------cc-----ccchhHHHHhc---
Confidence            588999999998 99999999999999985 88999998888777776531        11     12334444444   


Q ss_pred             HHcCCccEEEeCCcccC
Q 044923           89 SQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~  105 (214)
                          ..|++|++.+...
T Consensus        84 ----~~Divi~atss~~   96 (159)
T d1gpja2          84 ----RSDVVVSATAAPH   96 (159)
T ss_dssp             ----TCSEEEECCSSSS
T ss_pred             ----cCCEEEEecCCCC
Confidence                7899999998643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.19  E-value=7.4e-06  Score=59.06  Aligned_cols=87  Identities=14%  Similarity=0.224  Sum_probs=57.8

Q ss_pred             CCcEEEE-ecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH-
Q 044923           12 QGKVALI-TGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS-   89 (214)
Q Consensus        12 ~~k~~lI-tGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-   89 (214)
                      +|.+++| +||+||+|.+..+.....|++|+.+.|+.+..++..+.+.+....    .++..|-.+..++.+.+.++.+ 
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad----~vi~~~~~~~~~~~~~v~~~~~~  103 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT----QVITEDQNNSREFGPTIKEWIKQ  103 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS----EEEEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc----EEEeccccchhHHHHHHHHHHhh
Confidence            4555555 799999999999888888999999998887777766666554321    2233222222334444444444 


Q ss_pred             HcCCccEEEeCCc
Q 044923           90 QYGKLDIMFNNAG  102 (214)
Q Consensus        90 ~~g~id~li~~ag  102 (214)
                      ..+++|+++.+.|
T Consensus       104 ~g~~vdvv~D~vg  116 (189)
T d1gu7a2         104 SGGEAKLALNCVG  116 (189)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             ccCCceEEEECCC
Confidence            3457999999877

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=3.6e-06  Score=59.87  Aligned_cols=78  Identities=17%  Similarity=0.218  Sum_probs=54.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||+|++|...++.....|++|+++.+++++.+... ++   ..   . .  ..|.++++-.++    +++.
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~---Ga---~-~--vi~~~~~~~~~~----i~~~   92 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN---GA---H-E--VFNHREVNYIDK----IKKY   92 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT---TC---S-E--EEETTSTTHHHH----HHHH
T ss_pred             CCCCEEEEEeccccccccccccccccCccccccccccccccccc-cc---Cc---c-c--ccccccccHHHH----hhhh
Confidence            36899999999999999999988888999999988765543332 22   11   1 1  247776554433    3333


Q ss_pred             c--CCccEEEeCCc
Q 044923           91 Y--GKLDIMFNNAG  102 (214)
Q Consensus        91 ~--g~id~li~~ag  102 (214)
                      .  ..+|+++.+.|
T Consensus        93 t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          93 VGEKGIDIIIEMLA  106 (174)
T ss_dssp             HCTTCEEEEEESCH
T ss_pred             hccCCceEEeeccc
Confidence            2  36999999887

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.07  E-value=1.7e-05  Score=54.70  Aligned_cols=115  Identities=16%  Similarity=0.233  Sum_probs=67.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++++.|+|+ |.+|..+|..|+++|.  .|++.++++++.+....++...........+...|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            467888896 9999999999999983  599999998777666656654322111233333343   21           


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      ....|++|..||.....        .++-...++.|.    ...+...+.+.+.. .+.++++|.
T Consensus        70 ~~~adivvitag~~~~~--------g~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvtN  122 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKP--------GESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAAN  122 (146)
T ss_dssp             GTTCSEEEECCCC------------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hccccEEEEecccccCC--------CCCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeCC
Confidence            23789999999964321        122344455665    44555555555554 445555553

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=5.6e-06  Score=58.74  Aligned_cols=77  Identities=12%  Similarity=0.088  Sum_probs=57.6

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .+++||.++|.|+ ||-+++++..|.+.|.++.+..|+.++.+++.+.+....    .+..  .+..+.           
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~----~~~~--~~~~~~-----------   75 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG----SIQA--LSMDEL-----------   75 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS----SEEE--CCSGGG-----------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc----cccc--cccccc-----------
Confidence            3578999999997 889999999999999999999999998888887776432    1221  222211           


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                       .....|++||+....
T Consensus        76 -~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 -EGHEFDLIINATSSG   90 (170)
T ss_dssp             -TTCCCSEEEECCSCG
T ss_pred             -cccccceeecccccC
Confidence             113689999997665

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.01  E-value=5.4e-06  Score=59.28  Aligned_cols=78  Identities=17%  Similarity=0.193  Sum_probs=54.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|+++||+||+|++|...++.+...|++++++.+++++.+.+.    +..     .. ...|..+++-.    +++++.
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~----~~G-----a~-~vi~~~~~~~~----~~v~~~   89 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLG-----VE-YVGDSRSVDFA----DEILEL   89 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTC-----CS-EEEETTCSTHH----HHHHHH
T ss_pred             CCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc----ccc-----cc-ccccCCccCHH----HHHHHH
Confidence            35899999999999999999988888999999988776543322    221     11 12355554433    344443


Q ss_pred             c--CCccEEEeCCc
Q 044923           91 Y--GKLDIMFNNAG  102 (214)
Q Consensus        91 ~--g~id~li~~ag  102 (214)
                      .  .++|+++.+.|
T Consensus        90 t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          90 TDGYGVDVVLNSLA  103 (183)
T ss_dssp             TTTCCEEEEEECCC
T ss_pred             hCCCCEEEEEeccc
Confidence            3  36999999988

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=6.4e-06  Score=58.70  Aligned_cols=80  Identities=16%  Similarity=0.169  Sum_probs=56.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|++++|+||+||+|...++.....|++|+.+.+++++.+..++ +.   .   .   ...|.++++-.+++.+ +- ..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lG---a---~---~vi~~~~~d~~~~v~~-~t-~g   95 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG---A---W---QVINYREEDLVERLKE-IT-GG   95 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTTSCHHHHHHH-HT-TT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cC---C---e---EEEECCCCCHHHHHHH-Hh-CC
Confidence            58999999999999999999988899999999999877655443 21   1   1   2247776554443322 11 12


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      ..+|+++.+.|.
T Consensus        96 ~g~d~v~d~~g~  107 (179)
T d1qora2          96 KKVRVVYDSVGR  107 (179)
T ss_dssp             CCEEEEEECSCG
T ss_pred             CCeEEEEeCccH
Confidence            369999998873

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=7e-06  Score=50.16  Aligned_cols=44  Identities=25%  Similarity=0.365  Sum_probs=38.0

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      -++.+++|+||+||+|....+.+...|++|+.+.+++++.+.+.
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            46889999999999999999988888999999999887765543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.96  E-value=1.2e-05  Score=54.51  Aligned_cols=71  Identities=25%  Similarity=0.407  Sum_probs=55.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      +++|.|+ |-+|+.+++.|.++|++|+++.++++..+...++.        .+.++..|.+|++.++++-      ....
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--------~~~vi~Gd~~~~~~l~~~~------i~~a   66 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--------DALVINGDCTKIKTLEDAG------IEDA   66 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------SSEEEESCTTSHHHHHHTT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--------hhhhccCcccchhhhhhcC------hhhh
Confidence            5788897 99999999999999999999999887766554432        3578899999999776651      1366


Q ss_pred             cEEEeC
Q 044923           95 DIMFNN  100 (214)
Q Consensus        95 d~li~~  100 (214)
                      |.++..
T Consensus        67 ~~vv~~   72 (132)
T d1lssa_          67 DMYIAV   72 (132)
T ss_dssp             SEEEEC
T ss_pred             hhhccc
Confidence            777764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=0.00028  Score=49.49  Aligned_cols=80  Identities=18%  Similarity=0.274  Sum_probs=53.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++++..+ ++..      . .++..+-.+..   +..+.+...
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga------~-~~~~~~~~~~~---~~~~~~~~~   93 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGA------D-LVLQISKESPQ---EIARKVEGQ   93 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTC------S-EEEECSSCCHH---HHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCC------c-ccccccccccc---ccccccccc
Confidence            5788999987 9999999999999998 6999998887665433 2211      1 22223333333   334444444


Q ss_pred             c-CCccEEEeCCcc
Q 044923           91 Y-GKLDIMFNNAGI  103 (214)
Q Consensus        91 ~-g~id~li~~ag~  103 (214)
                      + .++|++|.+.|.
T Consensus        94 ~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          94 LGCKPEVTIECTGA  107 (171)
T ss_dssp             HTSCCSEEEECSCC
T ss_pred             CCCCceEEEeccCC
Confidence            4 379999999984

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.87  E-value=2.2e-05  Score=55.59  Aligned_cols=77  Identities=13%  Similarity=0.109  Sum_probs=57.9

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+++|.++|.|+ ||-+++++..|.+.+.+|.+..|+.++++.+.+.+....    ++.....|-.+            
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~----~~~~~~~~~~~------------   76 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG----NIQAVSMDSIP------------   76 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS----CEEEEEGGGCC------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc----ccchhhhcccc------------
Confidence            4678999999976 788999999999988889999999999888888776432    23333333211            


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                        ....|++||+....
T Consensus        77 --~~~~diiIN~tp~g   90 (171)
T d1p77a1          77 --LQTYDLVINATSAG   90 (171)
T ss_dssp             --CSCCSEEEECCCC-
T ss_pred             --ccccceeeeccccc
Confidence              23789999998865

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=2.8e-05  Score=55.02  Aligned_cols=75  Identities=20%  Similarity=0.336  Sum_probs=51.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|++++|+||+|++|...++.....|++|+.+.+++++.+..++ +.   .   . .  ..|..+..      +++ ..
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lG---a---~-~--~i~~~~~~------~~~-~~   88 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LG---A---E-E--AATYAEVP------ERA-KA   88 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TT---C---S-E--EEEGGGHH------HHH-HH
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-cc---c---c-e--eeehhhhh------hhh-hc
Confidence            478999999999999999999888889999999988776654433 21   1   1 1  12443221      122 23


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..++|+++.+.|
T Consensus        89 ~~g~D~v~d~~G  100 (171)
T d1iz0a2          89 WGGLDLVLEVRG  100 (171)
T ss_dssp             TTSEEEEEECSC
T ss_pred             cccccccccccc
Confidence            357999999766

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.81  E-value=1.8e-05  Score=53.55  Aligned_cols=73  Identities=19%  Similarity=0.282  Sum_probs=54.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |.++|.|+ |-+|+.+|+.|.++|.+|+++..+++..+...    ..     ....+.+|.++++.+.++-      ..+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~-----~~~~~~gd~~~~~~l~~a~------i~~   64 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY-----ATHAVIANATEENELLSLG------IRN   64 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT-----CSEEEECCTTCTTHHHHHT------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh-----CCcceeeecccchhhhccC------Ccc
Confidence            55777776 78999999999999999999999876655442    21     2356778999998776651      125


Q ss_pred             ccEEEeCCc
Q 044923           94 LDIMFNNAG  102 (214)
Q Consensus        94 id~li~~ag  102 (214)
                      .|.+|...+
T Consensus        65 a~~vi~~~~   73 (134)
T d2hmva1          65 FEYVIVAIG   73 (134)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEEEcC
Confidence            677777665

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.1e-05  Score=58.18  Aligned_cols=81  Identities=21%  Similarity=0.255  Sum_probs=55.8

Q ss_pred             CccCCcEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEe
Q 044923            9 PRLQGKVALITGG----------------AGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHC   72 (214)
Q Consensus         9 ~~~~~k~~lItGa----------------s~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (214)
                      .+++||++|||+|                ||-.|.+||+++..+|++|.++.......          .+  ..+  -..
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------~p--~~~--~~~   67 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------TP--PFV--KRV   67 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------CC--TTE--EEE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------cc--ccc--ccc
Confidence            4689999999976                58899999999999999988876543210          00  112  223


Q ss_pred             eCCCHHHHHHHHHHHHHHcCCccEEEeCCcccCC
Q 044923           73 DVTKEKDIENAVNTAVSQYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        73 D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~  106 (214)
                      .+...++..   +.+.+.+...|++|++|++...
T Consensus        68 ~~~t~~~m~---~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          68 DVMTALEME---AAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             ECCSHHHHH---HHHHHHGGGCSEEEECCBCCSE
T ss_pred             eehhhHHHH---HHHHhhhccceeEeeeechhhh
Confidence            444444444   4444455578999999998743

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.73  E-value=0.00019  Score=49.05  Aligned_cols=114  Identities=16%  Similarity=0.183  Sum_probs=66.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++.|+|+ |.+|..+|..|+.++.  .+++.+++++.++....++.+.......+.....   +.++           .
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------V   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------h
Confidence            34566687 9999999999999985  5999999988877766676653322222222222   2221           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS  154 (214)
                      .+-|++|..||.....     ..+   -...++.|.    ...+.+.+.+.+. ..+.++++|.
T Consensus        67 ~~adivvitag~~~~~-----~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKP-----GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TTCSEEEECCCC-----------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCCceEEEecccccCc-----Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            3689999999965321     122   245566665    5555666666554 3455666555

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.71  E-value=0.00015  Score=50.29  Aligned_cols=123  Identities=20%  Similarity=0.219  Sum_probs=70.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +.+++.|+|+ |.+|..+|..|+..+. ++++.+.+++.++....++...... ..... ...+ ++.   ++.++    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~-~~~---~~~~~----   75 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAE-YSY---EAALT----   75 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEE-CSH---HHHHT----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeE-Eecc-Cch---hhhhc----
Confidence            4577888897 9999999999998885 6999998888777776666542110 01111 1111 111   11122    


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                         .-|++|..+|.......+-.+.+.   ...++.|.    ...+...+.+++.+ .+.++++|.
T Consensus        76 ---~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~----~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          76 ---GADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNS----KIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             ---TCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---CCCeEEEecccccCCCCCCcccch---hhhhhhhH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence               789999999976422111111122   22344454    44555555555543 455555555

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.70  E-value=9.2e-05  Score=52.65  Aligned_cols=81  Identities=16%  Similarity=0.247  Sum_probs=54.5

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -+|.+++|+|+ |+||...++.+...|+ +|+++++++++.+... ++.   .   . .  ..|.++.+ ..+..+++.+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lG---a---~-~--vi~~~~~~-~~~~~~~i~~   94 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIG---A---D-L--TLNRRETS-VEERRKAIMD   94 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTT---C---S-E--EEETTTSC-HHHHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-ccc---c---e-E--EEeccccc-hHHHHHHHHH
Confidence            46899999997 8999999999999998 6999999887665442 221   1   1 1  23444322 2233344444


Q ss_pred             Hc--CCccEEEeCCcc
Q 044923           90 QY--GKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~--g~id~li~~ag~  103 (214)
                      ..  ..+|++|.+.|.
T Consensus        95 ~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHGRGADFILEATGD  110 (182)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             hhCCCCceEEeecCCc
Confidence            33  259999999984

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.68  E-value=0.00061  Score=46.51  Aligned_cols=115  Identities=14%  Similarity=0.150  Sum_probs=66.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCc--chhhHHHHhhcc-CCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDD--LGESVCEDISSS-SSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~--~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ++.|+||+|.+|..+|..|+.++.  .+++.+++++  +++....++.+. .....++.....--.|.+.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----------
Confidence            488999999999999999999984  6899988753  334444444432 1111122222111112221          


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEe
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIIST  152 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~  152 (214)
                       ..+-|++|.+||....     ...+.   ...++.|.    .+.+.+.+.+++.....++.+
T Consensus        72 -l~~aDvVVitAG~~~~-----~g~sR---~dl~~~Na----~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          72 -IDESDVVIITSGVPRK-----EGMSR---MDLAKTNA----KIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             -GTTCSEEEECCSCCCC-----TTCCH---HHHHHHHH----HHHHHHHHHHHHHCCCEEEEC
T ss_pred             -hccceEEEEecccccC-----CCCCh---hhhhhhhH----HHHHHHHHHHhccCCCeEEEE
Confidence             2278999999997432     22344   34556665    455555555555443445444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.64  E-value=0.00019  Score=49.92  Aligned_cols=121  Identities=13%  Similarity=0.109  Sum_probs=75.8

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ...++++++.|+|+ |.+|..+|..|+.+|.  .+++.+.+++..+....++.............  -..|.+.+     
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~--~~~d~~~~-----   86 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIV--ADKDYSVT-----   86 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEE--ECSSGGGG-----
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEE--eccchhhc-----
Confidence            34566788888896 9999999999999985  49999998877766666665432111111121  11223322     


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                            ..-|++|..||.....     ..+.   ...++.|.    ...+.+.+.+++.. .+.++++|.
T Consensus        87 ------~~adiVVitAg~~~~~-----g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          87 ------ANSKIVVVTAGVRQQE-----GESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ------TTCSEEEECCSCCCCT-----TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ------ccccEEEEecCCcccc-----Ccch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence                  2789999999975321     2222   23444554    56666667666644 456666665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.62  E-value=0.00019  Score=49.28  Aligned_cols=118  Identities=14%  Similarity=0.175  Sum_probs=69.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      |++.|+|+ |.+|..+|..|+.+|.  .+++.+.++++++....++.+... ..........   |.+.+          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHHHh----------
Confidence            67778895 8999999999999884  599999988877666666654321 1112233322   33322          


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                       .+-|++|..||...+..    +.+-++=...++.|.    .+.+.+.+.+++.. .+.++++|-
T Consensus        68 -~~adiVVitaG~~~~~~----~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQ----DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC-----------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             -ccccEEEEecccccccc----ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence             26899999999754221    111111123445554    55566666666654 455555554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.61  E-value=0.00026  Score=48.69  Aligned_cols=81  Identities=14%  Similarity=0.073  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .-|++.|+||.|-+|..+|+.|.++|++|.+.+|+.....+...  ..     ..+.   ......+.+...+.++....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~--~~-----~~~v---~~~~~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL--AN-----ADVV---IVSVPINLTLETIERLKPYL   77 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH--TT-----CSEE---EECSCGGGHHHHHHHHGGGC
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh--hh-----cccc---ccccchhhheeeeecccccc
Confidence            34789999999999999999999999999999998754433221  11     1222   23334556666777666654


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                      .+=.+++..++
T Consensus        78 ~~~~iiiD~~S   88 (152)
T d2pv7a2          78 TENMLLADLTS   88 (152)
T ss_dssp             CTTSEEEECCS
T ss_pred             cCCceEEEecc
Confidence            33335555544

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.59  E-value=9.2e-05  Score=51.98  Aligned_cols=81  Identities=11%  Similarity=0.209  Sum_probs=53.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -+|.+++|.|++|++|...++.+...|+ .|+++++++++.+..++ +.   .   .   ...|.++++..++..+..  
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~G---a---~---~~i~~~~~~~~~~~~~~~--   93 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AG---A---D---YVINASMQDPLAEIRRIT--   93 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HT---C---S---EEEETTTSCHHHHHHHHT--
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cC---C---c---eeeccCCcCHHHHHHHHh--
Confidence            3578999999999999999999988885 68888888765544432 21   1   1   223555544444333221  


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                      .-+.+|++|.++|.
T Consensus        94 ~~~~~d~vid~~g~  107 (170)
T d1jvba2          94 ESKGVDAVIDLNNS  107 (170)
T ss_dssp             TTSCEEEEEESCCC
T ss_pred             hcccchhhhccccc
Confidence            11369999999884

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.56  E-value=0.00045  Score=47.03  Aligned_cols=114  Identities=15%  Similarity=0.159  Sum_probs=69.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecC--CcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIK--DDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~--~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++.|+||+|.+|.++|..|+.++.  .+++.+.+  ++..+....++.........+.+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999985  48888753  3333333344433111112333333332   22           


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      ..+-|++|..||....     ...+.   .+.++.|.    ...+.+.+.+++.. .+.++.+|.
T Consensus        68 ~~~aDiVvitaG~~~~-----~g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ-----PGQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCC-----TTCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEecccccc-----cCCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence            2278999999996432     12233   45666676    66677777777664 455555544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=6.1e-05  Score=53.95  Aligned_cols=79  Identities=15%  Similarity=0.276  Sum_probs=50.8

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEE-EecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLI-ADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++++|||+||+||+|...++.....|+++++ +.+++++...+.+++..      .   ...|.++++. .+.++++.. 
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga------d---~vi~~~~~~~-~~~~~~~~~-   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF------D---AAVNYKTGNV-AEQLREACP-   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC------S---EEEETTSSCH-HHHHHHHCT-
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc------e---EEeeccchhH-HHHHHHHhc-
Confidence            3489999999999999999988778987554 45555544444443321      1   2345554443 333333321 


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                       ..+|+++.+.|
T Consensus        99 -~GvDvv~D~vG  109 (187)
T d1vj1a2          99 -GGVDVYFDNVG  109 (187)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -cCceEEEecCC
Confidence             36999999988

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.54  E-value=5.3e-05  Score=53.37  Aligned_cols=44  Identities=20%  Similarity=0.398  Sum_probs=37.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE   55 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~   55 (214)
                      ++.+|||+||+||+|...++.....|++|+.+.+++++.+.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            56789999999999999998888889999999999887665544

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.53  E-value=0.00014  Score=51.11  Aligned_cols=45  Identities=16%  Similarity=0.281  Sum_probs=38.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHh
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~   57 (214)
                      ++|.++|.|+ ||.+++++..|.+.|+ ++.+..|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6788999987 8999999999999997 5889999988877776654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=0.0003  Score=48.64  Aligned_cols=114  Identities=12%  Similarity=0.071  Sum_probs=63.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC---------eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA---------KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~---------~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++.|+||+|.+|..++..|++.+.         +++...++.+.++....++.....  .....+...-.+.+       
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF--PLLAGLEATDDPKV-------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTEEEEEEESCHHH-------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc--ccccccccCCchhh-------
Confidence            699999999999999999998763         122223344444444333333221  12222323222222       


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-C-CCeEEEec
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-G-RGSIISTA  153 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~g~iv~~s  153 (214)
                          .+...|++|..+|....     ...+.+++   ++.|+    ...+.+.+.+.+. + .+.++.+|
T Consensus        77 ----~~~~advViitaG~~~~-----pg~~r~dl---~~~N~----~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          77 ----AFKDADYALLVGAAPRK-----AGMERRDL---LQVNG----KIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----HTTTCSEEEECCCCCCC-----TTCCHHHH---HHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----hcccccEEEeecCcCCC-----CCCcHHHH---HHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence                22378999999998532     23455444   45555    5556666666653 2 24454444

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00023  Score=49.86  Aligned_cols=75  Identities=16%  Similarity=0.281  Sum_probs=52.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|.+++|.|+ |+||...++.+...|++++++++++++.+.. +++..      .   ...|..+++....       .
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lGa------d---~~i~~~~~~~~~~-------~   90 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGA------D---EVVNSRNADEMAA-------H   90 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTC------S---EEEETTCHHHHHT-------T
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hccCC------c---EEEECchhhHHHH-------h
Confidence            36899999986 8999999988888999999998887765433 33321      1   1246666554322       2


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      .+++|++|.+.|.
T Consensus        91 ~~~~D~vid~~g~  103 (168)
T d1uufa2          91 LKSFDFILNTVAA  103 (168)
T ss_dssp             TTCEEEEEECCSS
T ss_pred             cCCCceeeeeeec
Confidence            2479999999984

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.47  E-value=0.001  Score=46.89  Aligned_cols=115  Identities=10%  Similarity=0.046  Sum_probs=62.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-------KVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      .+|.||||+|.||.+++..|++...       .+.+.+...  +.++...-++.+....  ....... -++   ..+  
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~--~~~~~~~-~~~---~~~--   96 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYP--LLREVSI-GID---PYE--   96 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TEEEEEE-ESC---HHH--
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccc--cccCccc-ccc---chh--
Confidence            4699999999999999999998642       244444433  2233333333332211  1111111 112   112  


Q ss_pred             HHHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CC-CeEEEec
Q 044923           85 NTAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GR-GSIISTA  153 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~-g~iv~~s  153 (214)
                           .+...|++|..+|....     ...+.   .+.++.|.    ...+.+.+.+.+. +. ..|+.++
T Consensus        97 -----~~~~aDvVvi~ag~~rk-----pg~tR---~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          97 -----VFEDVDWALLIGAKPRG-----PGMER---AALLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             -----HTTTCSEEEECCCCCCC-----TTCCH---HHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             -----hccCCceEEEeeccCCC-----CCCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence                 23388999999997532     23344   44556665    5556666666653 32 3344443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=0.00031  Score=48.26  Aligned_cols=116  Identities=13%  Similarity=0.207  Sum_probs=70.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      .++++.|+|+ |.+|..+|..|+.++.  .+++.+++++.++....++.+.... ...+.+...|.   +.         
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~---------   71 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD---------   71 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG---------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH---------
Confidence            4567888897 9999999999999985  4999999988777666666643221 11233333333   21         


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTAS  154 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS  154 (214)
                        ..+-|++|..+|.....     ..+.   ...+..|.    ...+.+.+.+++. ..+.++++|.
T Consensus        72 --l~daDvvvitag~~~~~-----~~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 --CRDADLVVICAGANQKP-----GETR---LDLVDKNI----AIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             --TTTCSEEEECCSCCCCT-----TTCS---GGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             --hccceeEEEeccccccc-----Ccch---hHHHHHHH----HHHHHHHHHHHhhCCCceEEEecC
Confidence              22679999999975322     1111   22334444    3444445554443 3456666655

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.42  E-value=0.00024  Score=50.08  Aligned_cols=80  Identities=21%  Similarity=0.260  Sum_probs=51.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -+|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+.-.       . ..  .|..+ .+.+.+..+.. 
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga-------~-~~--i~~~~~~~~~~~~~~~~-   94 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA-------T-EC--VNPQDYKKPIQEVLTEM-   94 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-------S-EE--ECGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC-------e-eE--EecCCchhHHHHHHHHH-
Confidence            36899999999 6899999999999985 68888888877654433211       1 11  22222 22233333322 


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                       ..+.+|++|.+.|.
T Consensus        95 -~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 -SNGGVDFSFEVIGR  108 (176)
T ss_dssp             -TTSCBSEEEECSCC
T ss_pred             -hcCCCCEEEecCCc
Confidence             12479999999995

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00011  Score=52.27  Aligned_cols=43  Identities=26%  Similarity=0.391  Sum_probs=37.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVC   54 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~   54 (214)
                      +++++||+||+||+|....+.....|++|+.+.+++++.+...
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            4568999999999999999988889999999999988765443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.41  E-value=0.0003  Score=48.10  Aligned_cols=114  Identities=13%  Similarity=0.185  Sum_probs=66.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+||+|.+|.++|..|+.+|.  .+++.+.++.+++  ..++.....     ..-........+..+.++       
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~-----~~~~~~~~~~~~~~~~~~-------   67 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIET-----RATVKGYLGPEQLPDCLK-------   67 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSS-----SCEEEEEESGGGHHHHHT-------
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhh-----hcCCCeEEcCCChHHHhC-------
Confidence            588999999999999999999985  3888887654332  233332211     111122222333333333       


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      +.|++|..||.....     ..+.   ...++.|.    ...+.+.+.+++.+ .+.++.+|.
T Consensus        68 ~aDivVitag~~~~~-----g~sR---~~ll~~N~----~i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          68 GCDVVVIPAGVPRKP-----GMTR---DDLFNTNA----TIVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             TCSEEEECCSCCCCT-----TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCEEEECCCcCCCC-----CCCc---chHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            789999999974321     1222   33466665    44455555555543 456666665

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.40  E-value=0.00047  Score=46.81  Aligned_cols=113  Identities=18%  Similarity=0.219  Sum_probs=68.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|+ |.+|..+|..|+.++.  .+++.+.++++++....++.........+.....|   .+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            3566686 8999999999998874  59999998877776666655432211223333333   2222           2


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      +-|++|..||.....     ..+.   ...+..|.    .+.+.+.+.+.+.. .+.++++|.
T Consensus        67 ~adivvitag~~~~~-----g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP-----GETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCS-----SCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccCC-----Ccch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeCC
Confidence            679999999975321     2233   23445554    44555666665543 455555553

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.38  E-value=0.00026  Score=49.52  Aligned_cols=77  Identities=19%  Similarity=0.283  Sum_probs=51.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|.+++|.|+ |++|...++.+...|++|+++++++++++...+ +-.      . .++  |..+.+..      ..+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-lGa------~-~~i--~~~~~~~~------~~~~   88 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGA------D-HYI--ATLEEGDW------GEKY   88 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC------S-EEE--EGGGTSCH------HHHS
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-cCC------c-EEe--eccchHHH------HHhh
Confidence            36899999987 899999888887889999999999887755433 211      1 112  22222111      1123


Q ss_pred             cCCccEEEeCCccc
Q 044923           91 YGKLDIMFNNAGIV  104 (214)
Q Consensus        91 ~g~id~li~~ag~~  104 (214)
                      .+.+|.++.+.+..
T Consensus        89 ~~~~d~vi~~~~~~  102 (168)
T d1piwa2          89 FDTFDLIVVCASSL  102 (168)
T ss_dssp             CSCEEEEEECCSCS
T ss_pred             hcccceEEEEecCC
Confidence            35789999987754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=0.0012  Score=45.66  Aligned_cols=118  Identities=15%  Similarity=0.083  Sum_probs=70.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++..++.|+|+ |.+|..+|..|+.+|.  .+++.+++++.++....++............+..  .|.+.         
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~~---------   84 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDYNV---------   84 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSGGG---------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cchhh---------
Confidence            45556778886 9999999999999985  5999999887777666667653321111122222  22221         


Q ss_pred             HHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecC
Q 044923           89 SQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTAS  154 (214)
Q Consensus        89 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS  154 (214)
                        ...-|++|..||.....     ..+.   ...++.|.    ...+.+.+.+++. ..+.++++|.
T Consensus        85 --~~~adivvitag~~~~~-----~~~R---~dll~~N~----~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          85 --SANSKLVIITAGARMVS-----GQTR---LDLLQRNV----AIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             --GTTEEEEEECCSCCCCT-----TTCS---SCTTHHHH----HHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             --hccccEEEEecccccCC-----CCCH---HHHHHHHH----HHHHHHHHHHhccCCCeEEEEeCC
Confidence              23789999999975322     1111   12244444    4455555555544 3556666665

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.33  E-value=0.00084  Score=46.08  Aligned_cols=120  Identities=18%  Similarity=0.247  Sum_probs=69.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .++.|+|+ |++|..+|..|++++. ++++.+++++..+....++..... ...+..+...|  +.+.           .
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------L   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------c
Confidence            45777785 9999999998888875 599999988877776666654311 11123333332  2222           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      .+-|++|..+|........-.+.+.   ...++.|.    ...+.+.+.+++.. .+.++++|.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            2789999999975422111111112   23455554    45555555555543 455565555

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.33  E-value=0.00015  Score=51.30  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=51.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -+|.+++|.|+ ||||...++.+...|+ +|+++++++++.+... ++..       ..  ..|..+++..    +++.+
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa-------~~--~i~~~~~~~~----~~v~~   90 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGA-------TD--ILNYKNGHIE----DQVMK   90 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTC-------SE--EECGGGSCHH----HHHHH
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCc-------cc--cccccchhHH----HHHHH
Confidence            35888999986 8999999998888898 5888888876654443 2221       11  2344443322    23333


Q ss_pred             Hc--CCccEEEeCCcc
Q 044923           90 QY--GKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~--g~id~li~~ag~  103 (214)
                      ..  ..+|++|.++|.
T Consensus        91 ~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          91 LTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             HhhccCcceEEEccCC
Confidence            32  259999999995

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.33  E-value=0.00016  Score=51.22  Aligned_cols=49  Identities=22%  Similarity=0.396  Sum_probs=41.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhcc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSS   60 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~   60 (214)
                      +++||.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.+++.+.+...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            589999999976 678999999997776 8999999999988888777643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.29  E-value=0.00036  Score=47.90  Aligned_cols=44  Identities=23%  Similarity=0.413  Sum_probs=36.5

Q ss_pred             CcccCCCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 044923            1 MLQANSMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI   45 (214)
Q Consensus         1 ~~~~~~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r   45 (214)
                      ||.+.-+--.++||++||+|| |.+|..-++.|++.|++|.+++.
T Consensus         1 ~~~~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1           1 MVKSLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCCCEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CcccchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            555554444689999999999 55999999999999999988864

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.29  E-value=0.00094  Score=45.38  Aligned_cols=114  Identities=17%  Similarity=0.231  Sum_probs=67.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEe-eCCCHHHHHHHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHC-DVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~-D~~~~~~~~~~~~~~~~~   90 (214)
                      |++.|+|+ |.+|.++|..|+.++. ++++.+.+++..+....++..... ......+..+ |..+   +          
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~---~----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD---T----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG---G----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH---h----------
Confidence            56677786 9999999999998874 799999888777666666543211 0011222222 3222   1          


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                       .+-|++|.+||.....        .+.-...++.|.    ...+...+.+.+.. .+.++++|.
T Consensus        68 -~~advvvitag~~~~~--------~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          68 -ANSDVIVVTSGAPRKP--------GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             -TTCSEEEECCSCC-----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             -cCCCEEEEeeeccCCc--------CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence             2679999999975321        112234455554    56677777777654 455555443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.25  E-value=0.00058  Score=47.87  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=49.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC-HHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK-EKDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~   88 (214)
                      -+|.+++|.|+ +|+|...++.+...|+. |+++++++++.+ ..+++-..       .+  .|..+ .+.+.+.+++. 
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~lGa~-------~~--i~~~~~~~~~~~~~~~~-   94 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEFGAT-------EC--INPQDFSKPIQEVLIEM-   94 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHHTCS-------EE--ECGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHhCCc-------EE--EeCCchhhHHHHHHHHH-
Confidence            46899999998 59999999999999976 666666665543 33443211       11  22222 22333333322 


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                       ..+.+|++|.+.|.
T Consensus        95 -~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 -TDGGVDYSFECIGN  108 (176)
T ss_dssp             -TTSCBSEEEECSCC
T ss_pred             -cCCCCcEeeecCCC
Confidence             22479999999984

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.25  E-value=0.00056  Score=44.52  Aligned_cols=38  Identities=29%  Similarity=0.485  Sum_probs=33.7

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .+++||+++|.|++. +|..-++.|.+.|++|++.+...
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~   45 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTF   45 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSC
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccC
Confidence            478999999999876 99999999999999999887654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.22  E-value=0.00056  Score=48.08  Aligned_cols=78  Identities=14%  Similarity=0.170  Sum_probs=50.4

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEE-EEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVL-IADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi-~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -+|.+++|.|+ |+||...++.+...|++++ ++++++++++..+ ++..       ..+  .|..+++ +.+   ++++
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga-------~~~--i~~~~~~-~~~---~i~~   91 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGA-------THV--INSKTQD-PVA---AIKE   91 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTC-------SEE--EETTTSC-HHH---HHHH
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCC-------eEE--EeCCCcC-HHH---HHHH
Confidence            46889999997 8999999998888898754 5566665544433 3311       122  3555533 222   3333


Q ss_pred             Hc-CCccEEEeCCcc
Q 044923           90 QY-GKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~-g~id~li~~ag~  103 (214)
                      .. +++|++|.+.|.
T Consensus        92 ~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          92 ITDGGVNFALESTGS  106 (174)
T ss_dssp             HTTSCEEEEEECSCC
T ss_pred             HcCCCCcEEEEcCCc
Confidence            22 579999999994

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00095  Score=45.75  Aligned_cols=76  Identities=8%  Similarity=0.062  Sum_probs=56.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGKL   94 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i   94 (214)
                      .++|.|. +-+|..+++.|.++|.+++++..+++......+.....     .+.++.+|.+|++.++++-      ..+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~-----~~~vi~Gd~~d~~~L~~a~------i~~a   72 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD-----NADVIPGDSNDSSVLKKAG------IDRC   72 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT-----TCEEEESCTTSHHHHHHHT------TTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC-----CcEEEEccCcchHHHHHhc------cccC
Confidence            4667776 69999999999999999999988876555444444322     4788999999998776552      2367


Q ss_pred             cEEEeCCc
Q 044923           95 DIMFNNAG  102 (214)
Q Consensus        95 d~li~~ag  102 (214)
                      |.+|...+
T Consensus        73 ~~vi~~~~   80 (153)
T d1id1a_          73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEccc
Confidence            78877654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.18  E-value=0.00072  Score=47.66  Aligned_cols=81  Identities=15%  Similarity=0.181  Sum_probs=52.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -+|.+++|.|+ ||+|...++.+...|+ +|+++++++++++..++. ..      . .++  |-.+.++..+.+.+.. 
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~-GA------~-~~i--n~~~~~~~~~~~~~~~-   95 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV-GA------T-ECI--SPKDSTKPISEVLSEM-   95 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH-TC------S-EEE--CGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc-CC------c-EEE--CccccchHHHHHHHHh-
Confidence            46899999986 8999999999999995 699999998877644332 21      1 112  2222222112222211 


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                      ..+.+|++|.+.|.
T Consensus        96 ~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 TGNNVGYTFEVIGH  109 (176)
T ss_dssp             HTSCCCEEEECSCC
T ss_pred             ccccceEEEEeCCc
Confidence            22479999999995

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.17  E-value=0.00093  Score=46.98  Aligned_cols=80  Identities=18%  Similarity=0.263  Sum_probs=50.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH-HHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE-KDIENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~   88 (214)
                      -+|.+|+|.|+ ||||...++.+...|+. |+++++++++++.. +++..       ..+  .|.... +......+.. 
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~Ga-------~~~--i~~~~~~~~~~~~~~~~-   94 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGA-------TDC--LNPRELDKPVQDVITEL-   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC-------SEE--ECGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHhCC-------Ccc--cCCccchhhhhhhHhhh-
Confidence            46899999975 99999999999999985 77778877665333 33311       112  222211 1222222222 


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                       ..+++|++|.++|.
T Consensus        95 -~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 -TAGGVDYSLDCAGT  108 (174)
T ss_dssp             -HTSCBSEEEESSCC
T ss_pred             -hcCCCcEEEEeccc
Confidence             23589999999994

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.16  E-value=0.00091  Score=46.44  Aligned_cols=77  Identities=21%  Similarity=0.240  Sum_probs=49.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      -+|.+++|.|+ |++|...++.+...|++|+++++++++++...+ +.   .   . .  ..|.++.+..+.+    .+.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~G---a---~-~--~i~~~~~~~~~~~----~~~   90 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LG---A---S-L--TVNARQEDPVEAI----QRD   90 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT---C---S-E--EEETTTSCHHHHH----HHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc-cC---c---c-c--cccccchhHHHHH----HHh
Confidence            35889999886 999999999888889999999998776644332 21   1   1 1  2456655544433    333


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      .++.|..|.+++
T Consensus        91 ~~g~~~~i~~~~  102 (166)
T d1llua2          91 IGGAHGVLVTAV  102 (166)
T ss_dssp             HSSEEEEEECCS
T ss_pred             hcCCcccccccc
Confidence            344555555554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00036  Score=43.82  Aligned_cols=38  Identities=26%  Similarity=0.367  Sum_probs=33.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      +++||+++|.|. |.-|.++|+.|.++|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999998 56799999999999999999987654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.07  E-value=0.0018  Score=43.83  Aligned_cols=114  Identities=16%  Similarity=0.194  Sum_probs=66.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.|+|+ |.+|..++..|+..+.  .+++.+.++++++....++..... ......+...  +|.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            3667796 8999999999999984  699999998877666555543321 0112233322  22322           2


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CCCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GRGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS  154 (214)
                      .+.|++|..||.....     ..+.   ...++.|.    ...+...+.+.+. +.+.++++|.
T Consensus        68 ~dadvvvitag~~~~~-----g~~r---~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKP-----GMTR---EDLLMKNA----GIVKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCT-----TCCH---HHHHHHHH----HHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCC-----CCch---HHHHHHHH----HHHHHHHHHhhccCCCeEEEEecC
Confidence            2789999999974321     2233   33445555    3344444444443 3455555554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.0044  Score=42.06  Aligned_cols=114  Identities=18%  Similarity=0.231  Sum_probs=65.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           15 VALITGGAGSIGECAARLFSKH-G--AKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g--~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.|+|++|.+|.++|..|+.+ +  ..+++.+..+ ..+...-++...... ..... ..+-.+.+.+    +      
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~-~~~~~-~~~~~~~~~~----~------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTA-VKIKG-FSGEDATPAL----E------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSS-CEEEE-ECSSCCHHHH----T------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccc-cCCcE-EEcCCCcccc----C------
Confidence            5789999999999999988754 4  4688888754 444444455443211 11111 1222233222    2      


Q ss_pred             CCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           92 GKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        92 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                       .-|++|..||.....     ..+.   ...++.|.    ...+...+.+.+.. .+.++++|.
T Consensus        69 -~aDvvvitaG~~~k~-----g~~R---~dl~~~N~----~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          69 -GADVVLISAGVRRKP-----GMDR---SDLFNVNA----GIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             -TCSEEEECCSCCCCT-----TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -CCCEEEECCCccCCC-----Ccch---hhHHHHHH----HHHHHHHHHHHhhCCCcEEEEccC
Confidence             679999999975321     2233   33456665    44455555555443 455666665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.01  E-value=0.003  Score=42.82  Aligned_cols=114  Identities=14%  Similarity=0.142  Sum_probs=68.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      ++.|+|+ |.+|.++|..|+.+|.  .+++.+.++++++....++...........+...  .+.+.+           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            3566686 9999999999999985  5999999887776655555543211112222222  222222           1


Q ss_pred             CccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           93 KLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        93 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                      .-|++|..||....     ...+..   +.++.|.    ...+...+.+++.+ .+.++++|.
T Consensus        69 daDvVVitaG~~~~-----~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          69 DADMVVITAGPRQK-----PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             TCSEEEECCCCCCC-----TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCcEEEEecccccC-----CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeCC
Confidence            67999999997432     223443   4566665    45555555555543 455555554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.98  E-value=0.00059  Score=47.99  Aligned_cols=43  Identities=23%  Similarity=0.257  Sum_probs=36.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            378889998 8999999999999999999999988776665443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.97  E-value=0.0021  Score=45.13  Aligned_cols=89  Identities=12%  Similarity=0.084  Sum_probs=62.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccC------------CCCCCceEEEeeCCCHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSS------------SSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~------------~~~~~v~~~~~D~~~~~~~~   81 (214)
                      +++-++|- |-+|.++|+.|+++|++|++.+|++++.+++.+.-....            ....+...+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45667766 889999999999999999999999988777654321100            00012345566777788888


Q ss_pred             HHHHHHHHHcCCccEEEeCCcc
Q 044923           82 NAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag~  103 (214)
                      ++.+.+.+...+=+++|.....
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHhccccCcEEEecCcc
Confidence            8888888776555677766543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.96  E-value=0.00084  Score=46.59  Aligned_cols=85  Identities=14%  Similarity=0.117  Sum_probs=53.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhh--ccCC---CCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS--SSSS---SANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~--~~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +.|+|. |-+|.++|+.|.++|++|+..+|+++..+...+.-.  ....   ...+.+++-. ...++.+.++++++.+.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIil-avp~~~~~~vl~~l~~~   80 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFL-CTPIQLILPTLEKLIPH   80 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEE-CSCHHHHHHHHHHHGGG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccc-cCcHhhhhhhhhhhhhh
Confidence            556654 999999999999999999999998776655433211  0000   0011222222 22467788888888776


Q ss_pred             cCCccEEEeCCc
Q 044923           91 YGKLDIMFNNAG  102 (214)
Q Consensus        91 ~g~id~li~~ag  102 (214)
                      ..+=.+++..++
T Consensus        81 l~~~~iv~~~~s   92 (165)
T d2f1ka2          81 LSPTAIVTDVAS   92 (165)
T ss_dssp             SCTTCEEEECCS
T ss_pred             cccccceeeccc
Confidence            655556666654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.94  E-value=0.0011  Score=46.62  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=51.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH-HHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD-IENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~   88 (214)
                      -+|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++..++ +-.       ..+  .|.++.+. +.+..... 
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa-------~~~--i~~~~~d~~~~~~~~~~-   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGA-------TEC--LNPKDYDKPIYEVICEK-   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTC-------SEE--ECGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCC-------cEE--EcCCCchhHHHHHHHHh-
Confidence            46899999986 8999999999999997 58888888877655433 211       112  23333221 22222211 


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                       ..+.+|++|.++|.
T Consensus        94 -~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 -TNGGVDYAVECAGR  107 (174)
T ss_dssp             -TTSCBSEEEECSCC
T ss_pred             -cCCCCcEEEEcCCC
Confidence             22479999999884

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.82  E-value=0.001  Score=46.53  Aligned_cols=79  Identities=15%  Similarity=0.274  Sum_probs=48.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      -.|.+++|.|+ |++|...++.+...|+. |+++++++++++...+ +.   .    ..+  .|-++ +.++...+..  
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~g---a----~~~--i~~~~-~~~~~~~~~~--   96 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LG---A----DHV--VDARR-DPVKQVMELT--   96 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TT---C----SEE--EETTS-CHHHHHHHHT--
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-cc---c----cee--ecCcc-cHHHHHHHhh--
Confidence            35789999886 99999999988888865 6677777765544332 21   1    122  34332 3333332211  


Q ss_pred             HcCCccEEEeCCcc
Q 044923           90 QYGKLDIMFNNAGI  103 (214)
Q Consensus        90 ~~g~id~li~~ag~  103 (214)
                      ....+|++|.++|.
T Consensus        97 ~~~g~d~vid~~g~  110 (172)
T d1h2ba2          97 RGRGVNVAMDFVGS  110 (172)
T ss_dssp             TTCCEEEEEESSCC
T ss_pred             CCCCceEEEEecCc
Confidence            11369999999994

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.76  E-value=0.0055  Score=41.39  Aligned_cols=113  Identities=16%  Similarity=0.168  Sum_probs=68.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhhccCCC-CCCceEEEe-eCCCHHHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHC-DVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~-D~~~~~~~~~~~~~~~~~   90 (214)
                      ++.|+|+ |.+|.++|..|+.+|.  .+++.+.+++..+....++.+.... .....+... |.   +.+          
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~~----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SLL----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GGG----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HHh----------
Confidence            4566786 9999999999998884  4999999887776655555432111 111222222 32   221          


Q ss_pred             cCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCC-CCeEEEecC
Q 044923           91 YGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAG-RGSIISTAS  154 (214)
Q Consensus        91 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS  154 (214)
                       ..-|++|..||.....     ..+.   ...+..|.    ...+...+.+++.+ .+.++++|.
T Consensus        68 -~~adiVvitag~~~~~-----g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          68 -KGSEIIVVTAGLARKP-----GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             -TTCSEEEECCCCCCCS-----SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             -ccccEEEEeccccCCC-----CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence             2779999999964321     2233   44555565    55566666666643 455555554

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=96.73  E-value=0.07  Score=40.68  Aligned_cols=154  Identities=12%  Similarity=0.066  Sum_probs=87.8

Q ss_pred             CCcEEEEecCC-ChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGA-GSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas-~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +|+.||=..+. ||++.+    .+..|+ .|+.++.++..++...+.+....-...++.++..|+-      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            57888866554 555433    445777 4889999988888877777655433346888988872      33444455


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccchh
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAYTS  169 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~  169 (214)
                      +..+.|++|.+...+.+.+.....  .   .       .....+.+.+++++++.  |.++ ++|....           
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~~~~~--~---~-------~~~~~L~~~a~~ll~pg--G~l~-~~scs~~-----------  267 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKKEVFS--V---S-------KDYHKLIRQGLEILSEN--GLII-ASTNAAN-----------  267 (317)
T ss_dssp             TTCCEEEEEECCCCC-----CCCC--H---H-------HHHHHHHHHHHHTEEEE--EEEE-EEECCTT-----------
T ss_pred             hcCCCCEEEEcChhhccchhHHHH--H---H-------HHHHHHHHHHHHHcCCC--CEEE-EEeCCcc-----------
Confidence            556899999997765433221111  1   1       12234566777777763  4444 4442211           


Q ss_pred             hHHHHHHHHHHHHHHHccCCcEEEEEeCCcccCc
Q 044923          170 SKHGVVGLMKNTAVELGRFGIRVNCVSPYAVSSP  203 (214)
Q Consensus       170 sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  203 (214)
                        .....|.+.+...+...+.++..+..-+.+-|
T Consensus       268 --~~~~~f~~~v~~a~~~~~~~~~~~~~~~~DfP  299 (317)
T d2b78a2         268 --MTVSQFKKQIEKGFGKQKHTYLDLQQLPSDFA  299 (317)
T ss_dssp             --SCHHHHHHHHHHHHTTCCCEEEEEECCCTTSC
T ss_pred             --CCHHHHHHHHHHHHHHcCCeEEEeccCCCCCC
Confidence              11223445555555566777776654333433

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.71  E-value=0.015  Score=39.60  Aligned_cols=114  Identities=15%  Similarity=0.173  Sum_probs=59.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEecCC--cchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKHGA-------KVLIADIKD--DLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~-------~vi~~~r~~--~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ++.|+||+|.+|.+++..|+..+.       .+++.+.+.  +.++.+..++......  ..  .....++..  .+   
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~--~~--~~~~~~~~~--~~---   75 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP--LL--KDVIATDKE--EI---   75 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT--TE--EEEEEESCH--HH---
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccc--cc--cccccCccc--cc---
Confidence            699999999999999999987652       245554433  2233333323222111  11  112222111  11   


Q ss_pred             HHHHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC-CC-CeEEEec
Q 044923           86 TAVSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPA-GR-GSIISTA  153 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~-g~iv~~s  153 (214)
                          .+...|++|..+|.....     ..+.+   ..++.|.    ...+.+.+.+.+. +. +.++.+|
T Consensus        76 ----~~~~~dvVVitag~~~~~-----g~sr~---dll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          76 ----AFKDLDVAILVGSMPRRD-----GMERK---DLLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             ----HTTTCSEEEECCSCCCCT-----TCCTT---TTHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----ccCCceEEEEecccCCCC-----CCchh---HHHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence                223789999999975432     22222   2345554    4555566665443 33 3344444

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.70  E-value=0.0025  Score=45.52  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=49.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++...+ +        .... ..|-.+. ++.+.+.++. .
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~--------Ga~~-~~~~~~~-~~~~~i~~~t-~   91 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q--------GFEI-ADLSLDT-PLHEQIAALL-G   91 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T--------TCEE-EETTSSS-CHHHHHHHHH-S
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c--------cccE-EEeCCCc-CHHHHHHHHh-C
Confidence            5899999986 8999888887777777 58888888766543332 2        1111 1233332 3322222221 2


Q ss_pred             cCCccEEEeCCccc
Q 044923           91 YGKLDIMFNNAGIV  104 (214)
Q Consensus        91 ~g~id~li~~ag~~  104 (214)
                      ...+|++|.+.|.-
T Consensus        92 g~g~D~vid~vG~~  105 (195)
T d1kola2          92 EPEVDCAVDAVGFE  105 (195)
T ss_dssp             SSCEEEEEECCCTT
T ss_pred             CCCcEEEEECcccc
Confidence            23699999999853

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0012  Score=47.27  Aligned_cols=44  Identities=25%  Similarity=0.416  Sum_probs=37.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhh
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS   58 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~   58 (214)
                      |++.|.|+ |-+|..||..++..|++|++.+++++.++...+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            68889998 679999999999999999999999887766655544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.68  E-value=0.00068  Score=48.88  Aligned_cols=43  Identities=30%  Similarity=0.501  Sum_probs=36.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhh
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES   52 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~   52 (214)
                      .+++||+++|-| -|.+|..+|+.|.+.|++|++.+.+.+..+.
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            369999999987 6779999999999999999998877655443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.0026  Score=43.71  Aligned_cols=37  Identities=19%  Similarity=0.056  Sum_probs=32.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhh
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGES   52 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~   52 (214)
                      ++.|.|+ |.||..++..|++.|++|.++.|+++..+.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~   38 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS   38 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhh
Confidence            5788888 999999999999999999999998765543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.62  E-value=0.0046  Score=42.58  Aligned_cols=41  Identities=29%  Similarity=0.374  Sum_probs=34.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      +|.+++|.|+ |+||...++.+...|++|+++++++++.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999875 9999999888888999999999888766544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.59  E-value=0.0029  Score=44.18  Aligned_cols=82  Identities=18%  Similarity=0.193  Sum_probs=53.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeC--CCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDV--TKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~--~~~~~~~~~~~~~   87 (214)
                      +++||.++|.|-|.=+|+-+|..|+++|+.|..+..+......      .... ..-......|+  -..+.+++...  
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~lk~~~~--   96 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT------RGES-LKLNKHHVEDLGEYSEDLLKKCSL--   96 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE------SCCC-SSCCCCEEEEEEECCHHHHHHHHH--
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc------cccc-eeeeeeccccccccchhHHhhccc--
Confidence            7999999999999999999999999999999887654321100      0000 00011112232  22444555554  


Q ss_pred             HHHcCCccEEEeCCcccC
Q 044923           88 VSQYGKLDIMFNNAGIVD  105 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~  105 (214)
                           ..|++|..+|...
T Consensus        97 -----~aDIvIsavG~p~  109 (171)
T d1edza1          97 -----DSDVVITGVPSEN  109 (171)
T ss_dssp             -----HCSEEEECCCCTT
T ss_pred             -----cCCEEEEccCCCc
Confidence                 5799999998754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.47  E-value=0.0054  Score=43.20  Aligned_cols=38  Identities=24%  Similarity=0.328  Sum_probs=34.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +.+.||++.|.|.+. ||+.+++.+..-|++|+..+|..
T Consensus        38 ~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          38 PLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CcccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence            358999999999876 99999999999999999998765

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.30  E-value=0.0049  Score=43.57  Aligned_cols=38  Identities=29%  Similarity=0.369  Sum_probs=33.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .+.||++.|.| .|.||+++++.+..-|++|+..++...
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC
Confidence            57889988888 689999999999999999999887654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.30  E-value=0.0028  Score=41.98  Aligned_cols=70  Identities=23%  Similarity=0.326  Sum_probs=48.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      |.++|.|. +.+|..+++.|.  +..++++..+++..+....    .     .+.++.+|.++++.+.++      ...+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~----~-----~~~~i~Gd~~~~~~L~~a------~i~~   62 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR----S-----GANFVHGDPTRVSDLEKA------NVRG   62 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH----T-----TCEEEESCTTSHHHHHHT------TCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh----c-----CccccccccCCHHHHHHh------hhhc
Confidence            56788875 778999999994  5567777777765543322    1     467889999998877654      1235


Q ss_pred             ccEEEeCC
Q 044923           94 LDIMFNNA  101 (214)
Q Consensus        94 id~li~~a  101 (214)
                      .+.+|...
T Consensus        63 A~~vi~~~   70 (129)
T d2fy8a1          63 ARAVIVNL   70 (129)
T ss_dssp             CSEEEECC
T ss_pred             CcEEEEec
Confidence            67777544

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.27  E-value=0.0063  Score=41.81  Aligned_cols=86  Identities=13%  Similarity=0.220  Sum_probs=54.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC----CCCceEEEeeCCCHHHHHHHH---HHHH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS----ANGCSYVHCDVTKEKDIENAV---NTAV   88 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~---~~~~   88 (214)
                      +-|+ |.|-+|.++|+.|+++|++|++.+|++++.+.+.+.-......    ..+..++-.=+.+++.+++++   +.+.
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            4444 4589999999999999999999999987766654432111000    012345555667788888776   3455


Q ss_pred             HHcCCccEEEeCCc
Q 044923           89 SQYGKLDIMFNNAG  102 (214)
Q Consensus        89 ~~~g~id~li~~ag  102 (214)
                      ....+=+++|.+..
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            55444456665544

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.22  E-value=0.0021  Score=45.63  Aligned_cols=44  Identities=25%  Similarity=0.317  Sum_probs=36.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhh
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDIS   58 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~   58 (214)
                      |++.|.|+ |=+|..+|..++..|++|++.+++++.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888898 779999999999999999999999877665555443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.18  E-value=0.0073  Score=41.93  Aligned_cols=80  Identities=18%  Similarity=0.297  Sum_probs=48.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHH-HHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKD-IENAVNTAV   88 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~   88 (214)
                      -+|.+++|.|+ +|+|...+..++..|. .|+.+++++++++...+ +-.      . .+  .|.++.+. ..+..+.. 
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GA------d-~~--in~~~~~~~~~~~~~~~-   94 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGA------T-DF--VNPNDHSEPISQVLSKM-   94 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTC------C-EE--ECGGGCSSCHHHHHHHH-
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCC------c-EE--EcCCCcchhHHHHHHhh-
Confidence            46889999986 6788888888888876 58888888776644332 211      1 12  23333222 22222211 


Q ss_pred             HHcCCccEEEeCCcc
Q 044923           89 SQYGKLDIMFNNAGI  103 (214)
Q Consensus        89 ~~~g~id~li~~ag~  103 (214)
                       ..+.+|+++.+.|.
T Consensus        95 -~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 -TNGGVDFSLECVGN  108 (175)
T ss_dssp             -HTSCBSEEEECSCC
T ss_pred             -ccCCcceeeeecCC
Confidence             12479999999994

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.12  E-value=0.012  Score=40.64  Aligned_cols=88  Identities=14%  Similarity=0.137  Sum_probs=55.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCCcchhhHHHHhh--ccCCC-----CCCceEEEeeCCCHHHHHHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGA--KVLIADIKDDLGESVCEDIS--SSSSS-----ANGCSYVHCDVTKEKDIENAV   84 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~~~~~~~~~~~~--~~~~~-----~~~v~~~~~D~~~~~~~~~~~   84 (214)
                      |+++|+|. |-||.++|+.|.+.|+  +|+..+++++..+...+.-.  .....     .....++-. .+-++.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            56888875 8999999999999996  57778888766554443311  00000     001122221 23367788888


Q ss_pred             HHHHHHcCCccEEEeCCcc
Q 044923           85 NTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        85 ~~~~~~~g~id~li~~ag~  103 (214)
                      +++.+....=.+++..++.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8888777555566666654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.0068  Score=41.94  Aligned_cols=44  Identities=11%  Similarity=0.060  Sum_probs=37.8

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      .-+++||.++|.|-|.=+|+-++..|.++|++|.++......++
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            34689999999999999999999999999999988876554443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.049  Score=34.80  Aligned_cols=70  Identities=14%  Similarity=0.200  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+.++.|.| +|-+|+-++.+..+-|+++++.+.+++.....   +        .-.++..|..|.+.+.++...-    
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---v--------a~~~i~~~~~d~~~l~~~~~~~----   73 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---V--------AHRSHVINMLDGDALRRVVELE----   73 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---G--------SSEEEECCTTCHHHHHHHHHHH----
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---c--------CCeEEECCCCCHHHHHHHHHhh----
Confidence            346788888 67899999999999999999998876533221   1        1256789999999998887643    


Q ss_pred             CCccEEE
Q 044923           92 GKLDIMF   98 (214)
Q Consensus        92 g~id~li   98 (214)
                       .+|++-
T Consensus        74 -~~DviT   79 (111)
T d1kjqa2          74 -KPHYIV   79 (111)
T ss_dssp             -CCSEEE
T ss_pred             -CCceEE
Confidence             678884

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0064  Score=42.29  Aligned_cols=44  Identities=18%  Similarity=0.213  Sum_probs=38.3

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      .-+++||.++|.|-|.=+|+-++..|+++|+.|.++......+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            34689999999999999999999999999999999877655443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.94  E-value=0.037  Score=36.77  Aligned_cols=77  Identities=12%  Similarity=0.151  Sum_probs=52.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++.|.|++|-+|+++++.+.+. ++.++..--..+....    ....     +.. +..|+|.++.+.+.++...+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~----~~~~-----~~D-vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSL----LTDG-----NTE-VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHH----HHTT-----TCS-EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhh----hccc-----cCC-EEEEcccHHHHHHHHHHHHhc--C
Confidence            4789999999999999987765 5665543322222211    1111     111 568999999999999888776  5


Q ss_pred             ccEEEeCCcc
Q 044923           94 LDIMFNNAGI  103 (214)
Q Consensus        94 id~li~~ag~  103 (214)
                      +-+|+-..|+
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            6678877775

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.84  E-value=0.0038  Score=45.73  Aligned_cols=48  Identities=19%  Similarity=0.432  Sum_probs=38.8

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCED   56 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~   56 (214)
                      +.+++||+++|-| .|-+|..+|+.|.+.|++|+..+.+....+.....
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            3468999999886 57899999999999999999988776665555443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.74  E-value=0.016  Score=41.08  Aligned_cols=40  Identities=28%  Similarity=0.359  Sum_probs=34.1

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ...+.||++.|.| -|.||+.+|+.|..-|++|+..++...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            3468999999996 578999999999999999999887644

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.66  E-value=0.054  Score=37.42  Aligned_cols=82  Identities=16%  Similarity=0.157  Sum_probs=52.4

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC---------------CCCceEEEeeCCCHHHHHHHHH
Q 044923           21 GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS---------------ANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus        21 as~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      |.|-+|.++|+.|+++|++|.+.+|++++.+.+.+.-......               ......+..-+.+...+...+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            6788999999999999999999999988877776553221100               0011233344445556666666


Q ss_pred             HHHHHcCCccEEEeCCc
Q 044923           86 TAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag  102 (214)
                      .+...+.+=++++...-
T Consensus        88 ~~~~~~~~~~iii~~st  104 (178)
T d1pgja2          88 QLKKVFEKGDILVDTGN  104 (178)
T ss_dssp             HHHHHCCTTCEEEECCC
T ss_pred             hhhhhccccceecccCc
Confidence            66666544455555443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.65  E-value=0.046  Score=37.30  Aligned_cols=87  Identities=14%  Similarity=0.163  Sum_probs=54.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC----CCCceEEEeeCCCHHHHHHHHHH---H
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS----ANGCSYVHCDVTKEKDIENAVNT---A   87 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~---~   87 (214)
                      ++-++ |.|-+|.++|+.|+++|++|.+.+|+.++.+.+...-......    .....++..-+.+.+.++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            45555 5688999999999999999999999877665544332111100    01234566667777777777643   3


Q ss_pred             HHHcCCccEEEeCCc
Q 044923           88 VSQYGKLDIMFNNAG  102 (214)
Q Consensus        88 ~~~~g~id~li~~ag  102 (214)
                      .....+=+++|....
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            444433345555444

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.62  E-value=0.021  Score=40.35  Aligned_cols=39  Identities=26%  Similarity=0.247  Sum_probs=33.2

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ..++||++.|.|. |.||+.+|+.+..-|++|+..++...
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            3578999999975 68999999999999999998887654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.61  E-value=0.033  Score=36.64  Aligned_cols=73  Identities=16%  Similarity=0.364  Sum_probs=53.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEE-ecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIA-DIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      ++.|.|++|-+|+++++.+.++|..++.. +++..      +.+.       +.. +..|+|.++.+.+.++...+.  +
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~-------~~D-VvIDFS~p~~~~~~l~~~~~~--~   65 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELD-------SPD-VVIDFSSPEALPKTVDLCKKY--R   65 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECS-------CCS-EEEECSCGGGHHHHHHHHHHH--T
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhc-------cCC-EEEEecCHHHHHHHHHHHHhc--C
Confidence            48899999999999999999999886654 22211      1111       112 467999999999999988776  5


Q ss_pred             ccEEEeCCcc
Q 044923           94 LDIMFNNAGI  103 (214)
Q Consensus        94 id~li~~ag~  103 (214)
                      +-+|+-..|+
T Consensus        66 ~p~ViGTTG~   75 (128)
T d1vm6a3          66 AGLVLGTTAL   75 (128)
T ss_dssp             CEEEECCCSC
T ss_pred             CCEEEEcCCC
Confidence            6688877775

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.091  Score=35.25  Aligned_cols=35  Identities=9%  Similarity=0.070  Sum_probs=25.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC-C---eEEEEecCCc
Q 044923           14 KVALITGGAGSIGECAARLFSKHG-A---KVLIADIKDD   48 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g-~---~vi~~~r~~~   48 (214)
                      |++-|.||||-+|..+.+.|.++. +   .+.+..++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            467888999999999998877653 2   3665555543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.49  E-value=0.11  Score=39.45  Aligned_cols=85  Identities=12%  Similarity=0.037  Sum_probs=57.1

Q ss_pred             CCcEEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGS-IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~g-IG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      +++.||=..+..| ++.    .+++.|++|+.++.+...++...+......-...++.++..|+.      +.++...++
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            5677887755544 433    34568999999999888887777766544332335788887773      334445555


Q ss_pred             cCCccEEEeCCcccCC
Q 044923           91 YGKLDIMFNNAGIVDE  106 (214)
Q Consensus        91 ~g~id~li~~ag~~~~  106 (214)
                      ..+.|++|.+...+..
T Consensus       202 ~~~fD~IilDPP~f~~  217 (309)
T d2igta1         202 GSTYDIILTDPPKFGR  217 (309)
T ss_dssp             TCCBSEEEECCCSEEE
T ss_pred             CCCCCEEEECCCcccc
Confidence            5689999999776543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.38  E-value=0.023  Score=39.69  Aligned_cols=33  Identities=24%  Similarity=0.372  Sum_probs=27.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ++.|.|+ |-.|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            3566766 78999999999999999999988543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.045  Score=41.27  Aligned_cols=25  Identities=28%  Similarity=0.302  Sum_probs=21.9

Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecC
Q 044923           22 AGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        22 s~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      ||-.|.++|++|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            3678999999999999999988654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.32  E-value=0.025  Score=39.79  Aligned_cols=39  Identities=18%  Similarity=0.175  Sum_probs=33.6

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ...++++++.|.| .|.||+++++.|..-|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            3468899999998 57899999999999999999998764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.23  E-value=0.019  Score=40.79  Aligned_cols=73  Identities=25%  Similarity=0.271  Sum_probs=52.4

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .+++||+||=.|+++|+   ++..++..|+. |+.+..+++.++...+..       .++.++.+|+.+.+         
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-------~~~~~~~~D~~~l~---------  105 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-------GGVNFMVADVSEIS---------  105 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-------TTSEEEECCGGGCC---------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-------ccccEEEEehhhcC---------
Confidence            36899999999999884   34457777864 988888776655444432       25788999986432         


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                          +++|++|.|-.+.
T Consensus       106 ----~~fD~Vi~NPPfg  118 (197)
T d1ne2a_         106 ----GKYDTWIMNPPFG  118 (197)
T ss_dssp             ----CCEEEEEECCCC-
T ss_pred             ----CcceEEEeCcccc
Confidence                5899999997653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.02  E-value=0.079  Score=40.37  Aligned_cols=118  Identities=13%  Similarity=0.098  Sum_probs=72.2

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..+|++||=.++..| |.++  .+++.+.+|+.++.++..++...+.+....-  .++.++..|+.+      +.+...+
T Consensus       143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl--~~~~~i~~d~~~------~~~~~~~  211 (318)
T d1wxxa2         143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGL--GNVRVLEANAFD------LLRRLEK  211 (318)
T ss_dssp             GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEESCHHH------HHHHHHH
T ss_pred             HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCC--CCcceeeccHHH------HhhhhHh
Confidence            357888888876654 3333  3455567899999999888888777765432  257788888743      2233444


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEe
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIIST  152 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~  152 (214)
                      ..++.|++|.+.......+.     .......       ....+.+.+.++++..  |.++..
T Consensus       212 ~~~~fD~Vi~DpP~~~~~~~-----~~~~~~~-------~~~~l~~~a~~lLkpG--G~Lv~~  260 (318)
T d1wxxa2         212 EGERFDLVVLDPPAFAKGKK-----DVERAYR-------AYKEVNLRAIKLLKEG--GILATA  260 (318)
T ss_dssp             TTCCEEEEEECCCCSCCSTT-----SHHHHHH-------HHHHHHHHHHHTEEEE--EEEEEE
T ss_pred             hhcCCCEEEEcCCccccchH-----HHHHHHH-------HHHHHHHHHHHHcCCC--CEEEEE
Confidence            44689999999876543311     1211111       1224566677777663  555543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.00  E-value=0.15  Score=36.03  Aligned_cols=78  Identities=17%  Similarity=0.195  Sum_probs=56.3

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ..+++|+++|=.|++.|.   ++..++.+|+ +|+.+..+++.++...+.+....   .+..++..|+.+.         
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~---~~~~~~~~d~~~~---------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK---GKFKVFIGDVSEF---------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT---TSEEEEESCGGGC---------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC---CCceEEECchhhh---------
Confidence            346899999999988773   3344556776 69999998887777766665433   3567788887542         


Q ss_pred             HHHHcCCccEEEeCCccc
Q 044923           87 AVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~  104 (214)
                          .+++|++|.|..+.
T Consensus       107 ----~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ----NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ----CCCCSEEEECCCCS
T ss_pred             ----CCcCcEEEEcCccc
Confidence                25899999998764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.00  E-value=0.16  Score=34.81  Aligned_cols=80  Identities=24%  Similarity=0.277  Sum_probs=58.9

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      ..+..+++|.|+ |-.|++-++....-|++|.+.+.+.+.++++.......      +   ..-.++++.+.+.++    
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~------~---~~~~~~~~~l~~~~~----   94 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR------V---ELLYSNSAEIETAVA----   94 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG------S---EEEECCHHHHHHHHH----
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc------c---eeehhhhhhHHHhhc----
Confidence            355678888887 46788888888899999999999988887776655431      2   234556666666555    


Q ss_pred             HcCCccEEEeCCcccCC
Q 044923           90 QYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~  106 (214)
                         ..|++|..+=+.+.
T Consensus        95 ---~aDivI~aalipG~  108 (168)
T d1pjca1          95 ---EADLLIGAVLVPGR  108 (168)
T ss_dssp             ---TCSEEEECCCCTTS
T ss_pred             ---cCcEEEEeeecCCc
Confidence               67999999987653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.97  E-value=0.034  Score=38.57  Aligned_cols=81  Identities=16%  Similarity=0.167  Sum_probs=56.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCC----------CCCCceEEEeeCCCHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSS----------SANGCSYVHCDVTKEKDI   80 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~----------~~~~v~~~~~D~~~~~~~   80 (214)
                      .+|++||..|++.|   ..+..|+++|++|+.++.+++.++...+.......          ....+.++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            46899999999988   47779999999999999998887777666543211          123457888888775432


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcc
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      ..         ...|.++.....
T Consensus        96 ~~---------~~~D~i~~~~~l  109 (201)
T d1pjza_          96 DI---------GHCAAFYDRAAM  109 (201)
T ss_dssp             HH---------HSEEEEEEESCG
T ss_pred             cc---------cceeEEEEEeee
Confidence            21         156777665443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.014  Score=46.64  Aligned_cols=35  Identities=20%  Similarity=0.368  Sum_probs=29.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecC
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIK   46 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~   46 (214)
                      +++.+|||.|+ ||||.++++.|+..|. ++.+++..
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            45678999998 6799999999999998 48888664

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.84  E-value=0.0093  Score=42.22  Aligned_cols=41  Identities=22%  Similarity=0.294  Sum_probs=33.6

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHH
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCE   55 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~   55 (214)
                      +++.|.||+. .|.++|..|++.|.+|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            5688888765 8999999999999999999998776655443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.51  E-value=0.044  Score=35.52  Aligned_cols=36  Identities=31%  Similarity=0.387  Sum_probs=30.4

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      +|+++|.|| |.+|.++|..|+++|.+|.++.+.+..
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            577777765 799999999999999999999887643

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.39  E-value=0.21  Score=35.18  Aligned_cols=40  Identities=33%  Similarity=0.434  Sum_probs=33.9

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ...+.||++.|.|. |.||+.+|+.|..-|++|+..++...
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            34688999999986 56999999999999999999987543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.38  E-value=0.028  Score=37.96  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=33.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CeEEEEecCCcchhhHHHHh
Q 044923           16 ALITGGAGSIGECAARLFSKHG-AKVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g-~~vi~~~r~~~~~~~~~~~~   57 (214)
                      +.++|+ |-+|.++++.|.+.| +++.+.+|++++.+.+.++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            556666 999999999999887 78999999988877776654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.35  E-value=0.025  Score=41.27  Aligned_cols=77  Identities=9%  Similarity=-0.035  Sum_probs=57.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+++++|=.|++.|.   ++..|+++|.+|+.++.+++.++...+......   .++.++..|+.+.+           .
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~---~~v~~~~~d~~~~~-----------~   98 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG---LKPRLACQDISNLN-----------I   98 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT---CCCEEECCCGGGCC-----------C
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccC---ccceeeccchhhhc-----------c
Confidence            557899999999986   788999999999999999887776655554432   25788888887643           1


Q ss_pred             cCCccEEEeCCccc
Q 044923           91 YGKLDIMFNNAGIV  104 (214)
Q Consensus        91 ~g~id~li~~ag~~  104 (214)
                      .++.|++++..+..
T Consensus        99 ~~~fD~i~~~~~~~  112 (246)
T d1y8ca_          99 NRKFDLITCCLDST  112 (246)
T ss_dssp             SCCEEEEEECTTGG
T ss_pred             cccccccceeeeee
Confidence            24789988765543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.34  E-value=0.041  Score=35.29  Aligned_cols=35  Identities=29%  Similarity=0.492  Sum_probs=30.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|.+..
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            67888875 689999999999999999999887643

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.28  E-value=0.23  Score=37.70  Aligned_cols=117  Identities=14%  Similarity=0.121  Sum_probs=70.8

Q ss_pred             CCcEEEEecCC-ChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGA-GSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        12 ~~k~~lItGas-~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      +|++||=.++. |+++.+    +++.|+ +|+.++.+++.++...+.+....-. .++.++..|+.      +.......
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~-~~~~~~~~d~~------~~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVE-DRMKFIVGSAF------EEMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHH------HHHHHHHH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCC-ccceeeechhh------hhhHHHHh
Confidence            47888888765 444443    445676 5999999998888777776654321 25677777763      23333444


Q ss_pred             HcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEec
Q 044923           90 QYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTA  153 (214)
Q Consensus        90 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~s  153 (214)
                      ...+.|++|.+.......        ..+......    ....+.+.++++++..  |.++..|
T Consensus       214 ~~~~fD~Vi~DpP~~~~~--------~~~~~~~~~----~y~~l~~~a~~ll~pG--G~lv~~s  263 (324)
T d2as0a2         214 KGEKFDIVVLDPPAFVQH--------EKDLKAGLR----AYFNVNFAGLNLVKDG--GILVTCS  263 (324)
T ss_dssp             TTCCEEEEEECCCCSCSS--------GGGHHHHHH----HHHHHHHHHHTTEEEE--EEEEEEE
T ss_pred             ccCCCCchhcCCccccCC--------HHHHHHHHH----HHHHHHHHHHHHcCCC--cEEEEEe
Confidence            556899999998765432        112222211    2235666677777653  5555554

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.27  E-value=0.26  Score=31.36  Aligned_cols=80  Identities=18%  Similarity=0.158  Sum_probs=56.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~   91 (214)
                      ||++||.--..-+...+...|.+.|+.|+....+.   ++..+.+.+.     ....+-+|+.-++ +--++++++++..
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~-----~~dliilD~~mp~~~G~e~~~~ir~~~   72 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKEL-----KPDIVTMDITMPEMNGIDAIKEIMKID   72 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH-----CCSEEEEECSCGGGCHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhc-----cCCEEEEecCCCCCCHHHHHHHHHHhC
Confidence            78999999999999999999999999987555443   2333333332     2355667776543 4557778888877


Q ss_pred             CCccEEEeC
Q 044923           92 GKLDIMFNN  100 (214)
Q Consensus        92 g~id~li~~  100 (214)
                      ..+-+++..
T Consensus        73 ~~~pvi~ls   81 (118)
T d1u0sy_          73 PNAKIIVCS   81 (118)
T ss_dssp             TTCCEEEEE
T ss_pred             CCCcEEEEE
Confidence            777776664

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.034  Score=36.23  Aligned_cols=34  Identities=24%  Similarity=0.247  Sum_probs=30.1

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      |+++|.||+ -||.++|..|++.|.+|.++.|++.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeeccc
Confidence            778888875 6999999999999999999988754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.32  Score=33.56  Aligned_cols=40  Identities=25%  Similarity=0.358  Sum_probs=33.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      ..+.|.++|+|| |--|.+.|..|+++|++|.+..+.+...
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~G   79 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEIG   79 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCccC
Confidence            456799999987 5678999999999999999998876554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.13  E-value=0.061  Score=34.86  Aligned_cols=36  Identities=39%  Similarity=0.538  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ++|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            467888885 569999999999999999999877653

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.09  E-value=0.33  Score=31.53  Aligned_cols=81  Identities=15%  Similarity=0.117  Sum_probs=52.2

Q ss_pred             CCccCCcEEEEecCCC-h---------HHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCH
Q 044923            8 SPRLQGKVALITGGAG-S---------IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKE   77 (214)
Q Consensus         8 ~~~~~~k~~lItGas~-g---------IG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~   77 (214)
                      ..+-+.|++||.|++. -         -+.+.+++|.+.|++++++..|++......+..       .++++.+.   ..
T Consensus         2 p~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~a-------D~lYfePl---t~   71 (127)
T d1a9xa3           2 PKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMA-------DATYIEPI---HW   71 (127)
T ss_dssp             CCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGS-------SEEECSCC---CH
T ss_pred             CCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhc-------ceeeeecC---CH
Confidence            3344568999999864 2         356778899999999999988886543322211       13333333   35


Q ss_pred             HHHHHHHHHHHHHcCCccEEEeCCcc
Q 044923           78 KDIENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        78 ~~~~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      +++.++++.-     ++|.++...|-
T Consensus        72 e~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          72 EVVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHHh-----CcCCeEEEeee
Confidence            6666665542     78898877663

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.08  E-value=0.19  Score=35.34  Aligned_cols=38  Identities=29%  Similarity=0.469  Sum_probs=33.1

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ..+.||++.|.|- |.||+.+|+.|..-|++|+..++..
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~   76 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR   76 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccc
Confidence            4588999999985 6899999999999999999887654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.97  E-value=0.043  Score=35.34  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=29.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .|+++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            367777775 68999999999999999999988653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.96  E-value=0.083  Score=35.50  Aligned_cols=37  Identities=19%  Similarity=0.128  Sum_probs=30.0

Q ss_pred             CcEEEEe-cCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           13 GKVALIT-GGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        13 ~k~~lIt-Gas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      ++.++|. .+++.||.++|..|++.|.+|.++.+.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            4555555 566899999999999999999999887543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.94  E-value=0.42  Score=33.15  Aligned_cols=38  Identities=32%  Similarity=0.324  Sum_probs=33.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ..+.++++.|. |.|.||+.+|+.+..-|++|+..++..
T Consensus        40 ~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence            35789999998 568999999999999999999998754

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.91  E-value=0.19  Score=34.34  Aligned_cols=80  Identities=14%  Similarity=0.191  Sum_probs=42.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHc--C---CeEEEEecCCcchhhHHHHhhccCCC-CCCceEEEeeCCCHHHHHHHHHH
Q 044923           13 GKVALITGGAGSIGECAARLFSKH--G---AKVLIADIKDDLGESVCEDISSSSSS-ANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~--g---~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      ..++.|+||++.....+...|...  .   ..+++.+.++++++...+.+...... .....+...  +|   ..+.+  
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal--   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAF--   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHH--
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhcc--
Confidence            345777788664333343444432  2   36999999988877554444332110 011222211  12   12222  


Q ss_pred             HHHHcCCccEEEeCCccc
Q 044923           87 AVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~  104 (214)
                           .+-|+||+.+|..
T Consensus        76 -----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVG   88 (167)
T ss_dssp             -----SSCSEEEECCCTT
T ss_pred             -----CCCCEEEECCCcC
Confidence                 2789999999975

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.90  E-value=0.083  Score=33.97  Aligned_cols=35  Identities=23%  Similarity=0.347  Sum_probs=29.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .|.++|.|| |-||.++|..|++.|.+|.++.+++.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            377888875 68999999999999999999887654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.84  E-value=0.051  Score=38.59  Aligned_cols=39  Identities=26%  Similarity=0.388  Sum_probs=30.7

Q ss_pred             CCCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923            6 SMSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus         6 ~~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      +|..++.   |+|+| +|--|...|..|+++|.+|+++-+++.
T Consensus         1 ~m~~~yD---viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           1 TIDTDYD---VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             CCCCBCS---EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCCcCC---EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            3555554   88888 456689999999999999999988653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.79  E-value=0.05  Score=35.27  Aligned_cols=34  Identities=32%  Similarity=0.550  Sum_probs=29.3

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      |.++|.|| |-||.++|..|++.|.+|.++.+++.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            67777775 68999999999999999999887664

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.18  Score=36.02  Aligned_cols=44  Identities=11%  Similarity=0.105  Sum_probs=35.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHh
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~   57 (214)
                      .++++||..|++.|   ..+..|+++|++|+.++-+++.++...+..
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            36789999999987   468899999999999999887776555443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.065  Score=39.11  Aligned_cols=36  Identities=25%  Similarity=0.481  Sum_probs=30.8

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIK   46 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~   46 (214)
                      .+++++|+|.| .||+|..++..|++.|.. +.+++..
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            47789999999 678999999999999985 7777654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.69  E-value=0.036  Score=37.45  Aligned_cols=37  Identities=11%  Similarity=0.301  Sum_probs=31.6

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHh
Q 044923           21 GAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDI   57 (214)
Q Consensus        21 as~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~   57 (214)
                      |.|-+|.++++.|.+.|+++++..|+.++.+++.++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            6788999999999999999999999887776665544

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.62  E-value=0.063  Score=34.37  Aligned_cols=34  Identities=24%  Similarity=0.343  Sum_probs=28.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            56666664 78999999999999999999988764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.45  E-value=0.075  Score=34.06  Aligned_cols=37  Identities=14%  Similarity=0.284  Sum_probs=30.9

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .++|.++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            34688887765 78999999999999999999888654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.44  E-value=0.14  Score=37.23  Aligned_cols=36  Identities=28%  Similarity=0.438  Sum_probs=29.9

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEe
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKH-GAKVLIAD   44 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~   44 (214)
                      ..+++|++++|-| .|-+|..+|+.|+++ |++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            3468999988875 899999999999865 99988665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.064  Score=36.71  Aligned_cols=37  Identities=32%  Similarity=0.607  Sum_probs=33.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .+.||+++|.|=+ -||+.+|+.|...|++|+++...+
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeeccc
Confidence            4789999999865 799999999999999999998876

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.15  E-value=0.14  Score=37.35  Aligned_cols=35  Identities=34%  Similarity=0.498  Sum_probs=29.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEec
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKH-GAKVLIADI   45 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r   45 (214)
                      +++||+++|-|- |-+|..+|+.|+++ |++|+.+.-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            589999999987 55999999999875 888776643

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.07  E-value=0.079  Score=35.54  Aligned_cols=35  Identities=14%  Similarity=0.167  Sum_probs=28.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      +-|+ |.|-+|.++|+.|+++|++|++.+++.+...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~   37 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPST   37 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHH
Confidence            3444 5699999999999999999988887665443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.87  E-value=0.096  Score=33.34  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=28.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      |.++|.| +|-+|.++|..|++.|.+|.++.+.+.
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            6666665 579999999999999999999887654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.18  Score=37.98  Aligned_cols=76  Identities=21%  Similarity=0.237  Sum_probs=51.6

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ..+||+||-.|++.|+   ++..++++|+ +|+.+..++.. ....+..... +...++.++..|+.+...         
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~-~~~~~i~~~~~~~~~l~~---------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLN-KLEDTITLIKGKIEEVHL---------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHT-TCTTTEEEEESCTTTSCC---------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHh-CCCccceEEEeeHHHhcC---------
Confidence            4689999999999986   6777888997 58888877643 2333333322 223468889888877431         


Q ss_pred             HHcCCccEEEeC
Q 044923           89 SQYGKLDIMFNN  100 (214)
Q Consensus        89 ~~~g~id~li~~  100 (214)
                       ...++|+++..
T Consensus        99 -~~~~~D~Ivse  109 (311)
T d2fyta1          99 -PVEKVDVIISE  109 (311)
T ss_dssp             -SCSCEEEEEEC
T ss_pred             -ccccceEEEEe
Confidence             11378999875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=92.74  E-value=0.24  Score=33.69  Aligned_cols=86  Identities=15%  Similarity=0.180  Sum_probs=53.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEE-EecCCc-ch-hhHHHHhhc---------c-CCCCCCceEEEeeCCCHHHH
Q 044923           15 VALITGGAGSIGECAARLFSKH-GAKVLI-ADIKDD-LG-ESVCEDISS---------S-SSSANGCSYVHCDVTKEKDI   80 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~-g~~vi~-~~r~~~-~~-~~~~~~~~~---------~-~~~~~~v~~~~~D~~~~~~~   80 (214)
                      ++.|.|++|-+|+++++...+. ++.++. +.|... .. ++..+....         . .....++. +..|+|.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence            5899999999999999988876 566443 333221 11 111000000         0 00001122 45899999999


Q ss_pred             HHHHHHHHHHcCCccEEEeCCcc
Q 044923           81 ENAVNTAVSQYGKLDIMFNNAGI  103 (214)
Q Consensus        81 ~~~~~~~~~~~g~id~li~~ag~  103 (214)
                      .+.++...+.  ++.+|+-..|+
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999877665  67788888875

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.71  E-value=0.11  Score=38.98  Aligned_cols=37  Identities=27%  Similarity=0.485  Sum_probs=32.9

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD   44 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~   44 (214)
                      +.++++||+++|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            567899999999886 7999999999999999988765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.65  E-value=0.078  Score=34.32  Aligned_cols=36  Identities=19%  Similarity=0.455  Sum_probs=30.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|++..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            367888875 789999999999999999999887643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.63  E-value=0.27  Score=32.84  Aligned_cols=81  Identities=12%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             CCccCCcEEEEecCCCh-HHHHHHHHHHHcCC-eEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHH
Q 044923            8 SPRLQGKVALITGGAGS-IGECAARLFSKHGA-KVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVN   85 (214)
Q Consensus         8 ~~~~~~k~~lItGas~g-IG~~ia~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~   85 (214)
                      ..+++|+.+|=.|+++| +|.    +.+.+|+ +|+.+..+++..+...+.+..... ..++.+++.|+.+      ++ 
T Consensus        10 ~~~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~-~~~~~ii~~D~~~------~l-   77 (152)
T d2esra1          10 GPYFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA-ENRFTLLKMEAER------AI-   77 (152)
T ss_dssp             CSCCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC-GGGEEEECSCHHH------HH-
T ss_pred             HhhCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhccc-ccchhhhcccccc------cc-
Confidence            34678999998877766 444    4566786 588988888777777666654432 2357788888532      22 


Q ss_pred             HHHHHcCCccEEEeCCc
Q 044923           86 TAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        86 ~~~~~~g~id~li~~ag  102 (214)
                        ....++.|+++.+..
T Consensus        78 --~~~~~~fDiIf~DPP   92 (152)
T d2esra1          78 --DCLTGRFDLVFLDPP   92 (152)
T ss_dssp             --HHBCSCEEEEEECCS
T ss_pred             --cccccccceeEechh
Confidence              222357899988754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.38  E-value=0.63  Score=32.16  Aligned_cols=86  Identities=21%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCC--------------
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTK--------------   76 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--------------   76 (214)
                      ++--.++|.|| |-.|.+-++....-|++|.+.+.+.+.++++.......         +..+..+              
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~---------i~~~~~~~~~~~~~~gyA~~~   96 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKF---------ITVDDEAMKTAETAGGYAKEM   96 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEE---------CCC------------------
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcce---------EEEeccccccccccccchhhc
Confidence            34467888886 46788888888899999999999998877766543221         1111111              


Q ss_pred             -HHHHHHHHHHHHHHcCCccEEEeCCcccCC
Q 044923           77 -EKDIENAVNTAVSQYGKLDIMFNNAGIVDE  106 (214)
Q Consensus        77 -~~~~~~~~~~~~~~~g~id~li~~ag~~~~  106 (214)
                       .+....--+.+.+...+-|++|..+=+.+.
T Consensus        97 s~~~~~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1          97 GEEFRKKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             -----CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             CHHHHHHHHHHHHHHHHhhhhheeeeecCCc
Confidence             111111223344445689999999887653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.35  E-value=0.15  Score=33.03  Aligned_cols=36  Identities=28%  Similarity=0.464  Sum_probs=30.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ..|.++|.|| |-||.++|..|++.|.+|.++.+.+.
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            3477888875 68999999999999999999977653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=92.24  E-value=0.21  Score=36.60  Aligned_cols=73  Identities=19%  Similarity=0.247  Sum_probs=52.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+|+++|=.|+++|+   ++..+++.|++|+.++.++..++...+......-   .+.++..|+.+      .+     .
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~---~~~~~~~d~~~------~~-----~  181 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV---RPRFLEGSLEA------AL-----P  181 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC---CCEEEESCHHH------HG-----G
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCC---ceeEEeccccc------cc-----c
Confidence            578999999999997   3345778899999999999888877776654332   45666666421      11     2


Q ss_pred             cCCccEEEeC
Q 044923           91 YGKLDIMFNN  100 (214)
Q Consensus        91 ~g~id~li~~  100 (214)
                      .++.|+++.|
T Consensus       182 ~~~fD~V~an  191 (254)
T d2nxca1         182 FGPFDLLVAN  191 (254)
T ss_dssp             GCCEEEEEEE
T ss_pred             ccccchhhhc
Confidence            3589999887

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.06  E-value=0.32  Score=33.49  Aligned_cols=77  Identities=12%  Similarity=0.138  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|.++|=.|+++|   .++..|++.+.+|+.++.+++.++...+.+....- ..++.++++|..+          .....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl-~~~v~~~~gda~~----------~~~~~   98 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL-GDNVTLMEGDAPE----------ALCKI   98 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-CTTEEEEESCHHH----------HHTTS
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCC-CcceEEEECchhh----------ccccc
Confidence            6788898998887   44556777888999999999888888877765432 2367888887522          11233


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                      ...|.++.+.+
T Consensus        99 ~~~D~v~~~~~  109 (186)
T d1l3ia_          99 PDIDIAVVGGS  109 (186)
T ss_dssp             CCEEEEEESCC
T ss_pred             CCcCEEEEeCc
Confidence            57899987654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.04  E-value=0.19  Score=35.73  Aligned_cols=80  Identities=14%  Similarity=0.216  Sum_probs=56.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|.+||-+|+++|--.++..++...+..|+.+..+++..+...+.+.....  .++.++..|..+..          ...
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~--~n~~~~~~d~~~~~----------~~~  142 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI--ENVIFVCGDGYYGV----------PEF  142 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEESCGGGCC----------GGG
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc--cccccccCchHHcc----------ccc
Confidence            578999999998877776666666667899999998888777777665432  24666777765311          112


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +..|.++.+++.
T Consensus       143 ~~fD~I~~~~~~  154 (213)
T d1dl5a1         143 SPYDVIFVTVGV  154 (213)
T ss_dssp             CCEEEEEECSBB
T ss_pred             cchhhhhhhccH
Confidence            478999998875

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.03  E-value=0.18  Score=35.09  Aligned_cols=79  Identities=16%  Similarity=0.104  Sum_probs=55.8

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .+++++|=.|++.|   .++..|++.+.+|..++-++...+...+.+....-....+.++.+|+.+.-  .         
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~---------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--K---------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--T---------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--c---------
Confidence            46889999998887   445667778889999998887777666655544333345788889986421  1         


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                      -+..|+++.|..+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            1378999988653

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=92.00  E-value=0.061  Score=37.93  Aligned_cols=31  Identities=16%  Similarity=0.179  Sum_probs=27.6

Q ss_pred             cEEEEecCCChHHH-----HHHHHHHHcCCeEEEEe
Q 044923           14 KVALITGGAGSIGE-----CAARLFSKHGAKVLIAD   44 (214)
Q Consensus        14 k~~lItGas~gIG~-----~ia~~L~~~g~~vi~~~   44 (214)
                      |++.|||-+.|+|+     ++|+.|+++|++|.++.
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999999996     67889999999999875

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.93  E-value=0.1  Score=36.01  Aligned_cols=36  Identities=14%  Similarity=0.273  Sum_probs=29.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDL   49 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~   49 (214)
                      +|+|+|+|| |-.|...|..|+++|++ |.+..++...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            577888876 67899999999999985 8888776543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.93  E-value=0.084  Score=37.28  Aligned_cols=37  Identities=24%  Similarity=0.342  Sum_probs=29.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      +.|. |.|-+|..+|..|+++|++|+..+.+++..+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            4444 789999999999999999999998876544333

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.85  E-value=0.17  Score=36.16  Aligned_cols=33  Identities=27%  Similarity=0.390  Sum_probs=28.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      |+|+|+|| |-.|..+|.+|+++|++|.++.|..
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            56888876 5789999999999999999998753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.81  E-value=0.18  Score=35.99  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=58.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|.+||.+|+++|--.++...|+  |.+|+.+.++++..+...+.+.....  .++.++..|..+-          ....
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~--~nv~~~~gd~~~g----------~~~~  143 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGV--KNVHVILGDGSKG----------FPPK  143 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTC--CSEEEEESCGGGC----------CGGG
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCC--ceeEEEECccccC----------Cccc
Confidence            57889999999999988888777  46688888887777666666655432  3688899998641          1223


Q ss_pred             CCccEEEeCCccc
Q 044923           92 GKLDIMFNNAGIV  104 (214)
Q Consensus        92 g~id~li~~ag~~  104 (214)
                      ++.|.++.+++..
T Consensus       144 ~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         144 APYDVIIVTAGAP  156 (215)
T ss_dssp             CCEEEEEECSBBS
T ss_pred             CcceeEEeecccc
Confidence            5899999988864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.76  E-value=0.18  Score=36.34  Aligned_cols=75  Identities=9%  Similarity=0.047  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++++|=.|++.|   .++..|+++|++|+.++.+++.++...+......   .++.+...|+.+.+-           -
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~---~~i~~~~~d~~~l~~-----------~  103 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLEIAF-----------K  103 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGGCCC-----------C
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc---ccchheehhhhhccc-----------c
Confidence            4678999999987   4567899999999999999877776666655432   257889999876431           1


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +..|.+++.-+.
T Consensus       104 ~~fD~I~~~~~~  115 (251)
T d1wzna1         104 NEFDAVTMFFST  115 (251)
T ss_dssp             SCEEEEEECSSG
T ss_pred             cccchHhhhhhh
Confidence            368988876443

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=91.71  E-value=0.14  Score=38.48  Aligned_cols=33  Identities=21%  Similarity=0.269  Sum_probs=22.8

Q ss_pred             cEEEEecC-CChH---HHHHHHHHHHcCCeEEEEecC
Q 044923           14 KVALITGG-AGSI---GECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        14 k~~lItGa-s~gI---G~~ia~~L~~~g~~vi~~~r~   46 (214)
                      |+++|++| |||-   ..+++++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45555554 4333   457999999999999877654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.61  E-value=0.14  Score=37.72  Aligned_cols=36  Identities=28%  Similarity=0.411  Sum_probs=31.8

Q ss_pred             CCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEe
Q 044923            8 SPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIAD   44 (214)
Q Consensus         8 ~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~   44 (214)
                      ..+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            3468999999998 68999999999999999988664

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.57  E-value=0.98  Score=29.58  Aligned_cols=87  Identities=13%  Similarity=0.063  Sum_probs=57.1

Q ss_pred             CCcEEEEecCC---ChHHHHHHHHHHHcCCeEEEEecCCcchh--hHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923           12 QGKVALITGGA---GSIGECAARLFSKHGAKVLIADIKDDLGE--SVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus        12 ~~k~~lItGas---~gIG~~ia~~L~~~g~~vi~~~r~~~~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +-|.+.|.|+|   +-.|..+.+.|.+.|++|+.+..+.....  .....+.+...   .++.+ .=+..++.+.+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~---~iD~v-~i~vp~~~~~~~~~e   93 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPD---KIEVV-DLFVKPKLTMEYVEQ   93 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSS---CCSEE-EECSCHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCc---cceEE-EEEeCHHHHHHHHHH
Confidence            46899999999   57999999999999999988876543221  11222222221   22221 122447778888888


Q ss_pred             HHHHcCCccEEEeCCccc
Q 044923           87 AVSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        87 ~~~~~g~id~li~~ag~~  104 (214)
                      +.+.  ++..++...|..
T Consensus        94 ~~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          94 AIKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHHH--TCSEEEECTTCC
T ss_pred             HHHh--CCCEEEEecccc
Confidence            8776  466788777743

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.54  E-value=0.34  Score=32.38  Aligned_cols=85  Identities=7%  Similarity=0.062  Sum_probs=52.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCC---CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSS---ANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +-++|- |-+|.++|+.|.+.|+.+ +..|+.++..+..+........   ......+-..+.+.+.+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445554 889999999999888755 5677766665555443322111   11234445556677778777777766654


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5455555444

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.45  E-value=0.96  Score=30.39  Aligned_cols=75  Identities=13%  Similarity=0.005  Sum_probs=39.8

Q ss_pred             EEEEecCCChHHHHHHH-HHHHc-----CCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHH
Q 044923           15 VALITGGAGSIGECAAR-LFSKH-----GAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAV   88 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~-~L~~~-----g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   88 (214)
                      ++.|.||++ +|...+- .|++.     ...+++.+.++++++...+........  ... +... ++.   .+.+    
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~--~~~-~~~t-~~~---~~~l----   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKD--RFK-VLIS-DTF---EGAV----   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTT--SSE-EEEC-SSH---HHHH----
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhcc--Cce-EEEe-cCc---cccc----
Confidence            467888865 5655443 23322     246999999887766443332222111  111 1121 221   1222    


Q ss_pred             HHcCCccEEEeCCccc
Q 044923           89 SQYGKLDIMFNNAGIV  104 (214)
Q Consensus        89 ~~~g~id~li~~ag~~  104 (214)
                         .+-|++|..||..
T Consensus        70 ---~~aDvVVita~~~   82 (162)
T d1up7a1          70 ---VDAKYVIFQFRPG   82 (162)
T ss_dssp             ---TTCSEEEECCCTT
T ss_pred             ---CCCCEEEEecccC
Confidence               2789999999974

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.34  E-value=0.12  Score=37.69  Aligned_cols=31  Identities=26%  Similarity=0.457  Sum_probs=26.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      |+|+|| |-.|.++|.+|+++|.+|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677765 6889999999999999999998864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.32  E-value=0.22  Score=35.68  Aligned_cols=40  Identities=25%  Similarity=0.390  Sum_probs=32.3

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDL   49 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~   49 (214)
                      +.-.+|.++|+||+ --|...|..|+++|++|.+..++.+.
T Consensus        45 ~~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          45 QTKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             CCSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecccc
Confidence            34567999999975 45889999999999999999876543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.06  E-value=0.25  Score=32.21  Aligned_cols=36  Identities=22%  Similarity=0.228  Sum_probs=30.5

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ++|+++|.| +|-+|.++|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            357788886 579999999999999999999988654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.94  E-value=0.15  Score=37.91  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=30.7

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .-+.|+|+|+||+ --|...|..|+++|++|.++.+++.
T Consensus        27 ~~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          27 TSNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             CSSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3455889999886 4488999999999999999977653

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.92  E-value=0.13  Score=37.83  Aligned_cols=37  Identities=16%  Similarity=0.259  Sum_probs=31.3

Q ss_pred             CCcEEEEecCCChHHHHH-----HHHHHHcCCeEEEEecCCc
Q 044923           12 QGKVALITGGAGSIGECA-----ARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~i-----a~~L~~~g~~vi~~~r~~~   48 (214)
                      .++.++|+.|=||+|+.+     |..|+++|.+|++++-+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            567788888899999765     8999999999999988754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.89  E-value=0.23  Score=34.75  Aligned_cols=82  Identities=13%  Similarity=0.187  Sum_probs=60.6

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      .+.++=+|-|+||.-.++.+.+ . +.+|+.++++++.++...+.+....   .++.+++.+.++.+.+       .+.+
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~---~r~~~~~~~f~~~~~~-------~~~~   91 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFL-------LKTL   91 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHH-------HHHT
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc---ccccchhHHHhhHHHH-------HHHc
Confidence            3445557888889988888876 3 5789999999988888777776543   2678899988775433       2332


Q ss_pred             --CCccEEEeCCcccC
Q 044923           92 --GKLDIMFNNAGIVD  105 (214)
Q Consensus        92 --g~id~li~~ag~~~  105 (214)
                        +.+|.++...|+.+
T Consensus        92 ~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          92 GIEKVDGILMDLGVST  107 (192)
T ss_dssp             TCSCEEEEEEECSCCH
T ss_pred             CCCCcceeeeccchhH
Confidence              58999999999753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.84  E-value=0.16  Score=36.93  Aligned_cols=34  Identities=24%  Similarity=0.309  Sum_probs=27.9

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +|+|+|+||+ -=|...|.+|+++|++|.++.+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5889999775 456888889999999999997654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.56  E-value=0.19  Score=36.58  Aligned_cols=35  Identities=34%  Similarity=0.550  Sum_probs=31.1

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADI   45 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r   45 (214)
                      +++||+++|-| .|-+|..+|+.|.+.|++|+.++-
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            68999999996 789999999999999999886653

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=90.48  E-value=0.88  Score=28.74  Aligned_cols=80  Identities=14%  Similarity=0.096  Sum_probs=54.3

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHHc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQY   91 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~   91 (214)
                      ||++||.--...+-..+.+.|.+.|++|.......    +..+.+...     ....+-+|+.-++ +--++++++++..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~----eal~~~~~~-----~~dlillD~~mP~~~G~el~~~lr~~~   71 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGL----QALDIVTKE-----RPDLVLLDMKIPGMDGIEILKRMKVID   71 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH----HHHHHHHHH-----CCSEEEEESCCTTCCHHHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHH----HHHHHHHhC-----CCCEEEEeccCCCCCHHHHHHHHHHhC
Confidence            58899999999999999999999999988654332    333333332     2355666766432 2346777888777


Q ss_pred             CCccEEEeCC
Q 044923           92 GKLDIMFNNA  101 (214)
Q Consensus        92 g~id~li~~a  101 (214)
                      ..+-+++..+
T Consensus        72 ~~~pvi~lt~   81 (119)
T d1peya_          72 ENIRVIIMTA   81 (119)
T ss_dssp             TTCEEEEEES
T ss_pred             CCCcEEEEec
Confidence            6676666654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.48  E-value=1.3  Score=28.26  Aligned_cols=76  Identities=11%  Similarity=0.142  Sum_probs=47.8

Q ss_pred             CCcEEEEecCCC----------hHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHH
Q 044923           12 QGKVALITGGAG----------SIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIE   81 (214)
Q Consensus        12 ~~k~~lItGas~----------gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~   81 (214)
                      ..|++||.|++.          --+...+++|.+.|++++++..|++......+.       ..++++.+.   ..+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~-------aD~lYfepl---t~e~v~   72 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT-------SDRLYFEPV---TLEDVL   72 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS-------SSEEECCCC---SHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh-------cCceEEccC---CHHHHH
Confidence            358899999864          234578889999999999998887654322111       113333333   345555


Q ss_pred             HHHHHHHHHcCCccEEEeCCc
Q 044923           82 NAVNTAVSQYGKLDIMFNNAG  102 (214)
Q Consensus        82 ~~~~~~~~~~g~id~li~~ag  102 (214)
                      ++++.-     ++|.++...|
T Consensus        73 ~Ii~~E-----~p~~ii~~~G   88 (121)
T d1a9xa4          73 EIVRIE-----KPKGVIVQYG   88 (121)
T ss_dssp             HHHHHH-----CCSEEECSSS
T ss_pred             HHHHHh-----CCCEEEeehh
Confidence            555432     6788877766

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.14  E-value=1.3  Score=29.40  Aligned_cols=45  Identities=20%  Similarity=0.172  Sum_probs=30.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhc
Q 044923           14 KVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISS   59 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~   59 (214)
                      |++.|-|+||-||.....-+.+.  .++|+.+.-+. +.+.+.++..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~   48 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLE   48 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHH
Confidence            78999999999999999988876  46766554322 22344444443

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=90.11  E-value=0.77  Score=33.82  Aligned_cols=80  Identities=14%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             cEEEEecCCCh-HHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGS-IGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~g-IG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g   92 (214)
                      +.++-.|+++| |+.++++   ...++|+.++-+++.++-..+....... ...+.+...|+.+.         ..+..+
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~-~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGV-SDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTC-TTSEEEEESSTTGG---------GGGGTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCC-CceeEEeecccccc---------cccccC
Confidence            45665666655 5555442   3568899999998887777666654332 23466777788643         223346


Q ss_pred             CccEEEeCCcccCC
Q 044923           93 KLDIMFNNAGIVDE  106 (214)
Q Consensus        93 ~id~li~~ag~~~~  106 (214)
                      ++|++|.|-.+...
T Consensus       179 ~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         179 SIEMILSNPPYVKS  192 (271)
T ss_dssp             TCCEEEECCCCBCG
T ss_pred             cccEEEEcccccCc
Confidence            89999999988743

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.06  E-value=2  Score=29.64  Aligned_cols=147  Identities=10%  Similarity=0.054  Sum_probs=80.9

Q ss_pred             ccCCcEEEEecCC--ChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGA--GSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGas--~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ...|++.++....  .....+++..|.+.|..++.+.....                          .+.+   .+.. .
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--------------------------~~~~---~l~~-~   71 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR--------------------------CGRD---ELAE-R   71 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT--------------------------CCHH---HHHH-H
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc--------------------------cCHH---HHHH-H
Confidence            3556776766443  35778888899999988765533221                          1111   2222 2


Q ss_pred             HHHcCCccEEEeCCcccCCCCCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCCeEEEecCCCcccCCCCCccc
Q 044923           88 VSQYGKLDIMFNNAGIVDEAKPNILDNDQAEFERILSVNLVGAFLGTKHAARVMKPAGRGSIISTASVCGVIGGVTSHAY  167 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y  167 (214)
                      ....+.++.+|+-.+.......   .. .     .....+...+.+.|++..   .....++.+++..+. ...+....-
T Consensus        72 ~~~~~~~~~vv~l~~~~~~~~~---~~-~-----~~~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~-~~~~~d~~~  138 (209)
T d2fr1a2          72 LRSVGEVAGVLSLLAVDEAEPE---EA-P-----LALASLADTLSLVQAMVS---AELGCPLWTVTESAV-ATGPFERVR  138 (209)
T ss_dssp             HTTSCCCSEEEECTTTTCCCCS---SC-G-----GGCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCS-CSSTTSCCS
T ss_pred             hhccCCCCeEEEeCCCCCCCCc---ch-h-----HHHHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCc-ccCCCcccC
Confidence            2344578888888765432211   11 1     011123334455565543   222344555554322 222333444


Q ss_pred             hhhHHHHHHHHHHHHHHHccCCcEEEEEeCCc
Q 044923          168 TSSKHGVVGLMKNTAVELGRFGIRVNCVSPYA  199 (214)
Q Consensus       168 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~Pg~  199 (214)
                      ....+++.+|+|+++.|+....+++..+.+..
T Consensus       139 ~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~~~  170 (209)
T d2fr1a2         139 NAAHGALWGVGRVIALENPAVWGGLVDVPAGS  170 (209)
T ss_dssp             CGGGHHHHHHHHHHHHHCGGGEEEEEEECTTC
T ss_pred             CHhHHhHHHHHHHHHHhCCCceEEEEECCCCC
Confidence            67889999999999999876556666665543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.92  E-value=0.5  Score=33.01  Aligned_cols=76  Identities=17%  Similarity=0.094  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      ++.+||=.|++.|.   ++..|++.|++|+.++.+++.++...+......   ..+..+..|..+...          ..
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~---~~~~~~~~d~~~l~~----------~~  100 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSF----------ED  100 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCS----------CT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc---ccccccccccccccc----------cC
Confidence            34678999999987   667889999999999998877766666554432   245677788776320          11


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +..|++++...+
T Consensus       101 ~~fD~I~~~~~l  112 (226)
T d1ve3a1         101 KTFDYVIFIDSI  112 (226)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cCceEEEEecch
Confidence            368998887654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.79  E-value=0.59  Score=35.09  Aligned_cols=77  Identities=17%  Similarity=0.226  Sum_probs=51.3

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+||+||-.|++.|+   ++..+++.|+. |+.+..++ ......+..... +...++.++..|+.+.+.          
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n-~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKAN-KLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHT-TCTTTEEEEESCTTTCCC----------
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHh-CCccccceEeccHHHccc----------
Confidence            589999999999986   56778888864 88888665 333333333322 223468888988877431          


Q ss_pred             HcCCccEEEeCCc
Q 044923           90 QYGKLDIMFNNAG  102 (214)
Q Consensus        90 ~~g~id~li~~ag  102 (214)
                      ...++|+++..-.
T Consensus        97 ~~~~~D~ivs~~~  109 (316)
T d1oria_          97 PVEKVDIIISEWM  109 (316)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             ccceeEEEeeeee
Confidence            1247899887533

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.77  E-value=0.52  Score=32.39  Aligned_cols=41  Identities=27%  Similarity=0.288  Sum_probs=29.8

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhHH
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESVC   54 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~~   54 (214)
                      .+|-|.||||-.|.++.+.|+++ ...+..+..+....+...
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~   43 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLE   43 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHH
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCccc
Confidence            36889999999999999999886 455665555444444443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.68  E-value=0.29  Score=35.15  Aligned_cols=35  Identities=20%  Similarity=0.257  Sum_probs=27.8

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .++|+|+|| |--|..+|..|+++|.+|+++.++.+
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            466888876 45678888899999999999987643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.48  E-value=0.23  Score=33.38  Aligned_cols=35  Identities=20%  Similarity=0.397  Sum_probs=28.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCC--eEEEEecCC
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGA--KVLIADIKD   47 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~--~vi~~~r~~   47 (214)
                      .||+++|.||+ -.|.++|..|.+.+.  +|.++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999975 568999999999874  678877654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.46  E-value=0.27  Score=37.07  Aligned_cols=38  Identities=32%  Similarity=0.526  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcch
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLG   50 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~   50 (214)
                      +.|.++|+||+ -=|..+|..|+++|.+|.++-++..-+
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~iG   38 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDHIG   38 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCCCc
Confidence            46889999875 457888899999999999997766443

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.37  E-value=0.22  Score=35.38  Aligned_cols=34  Identities=29%  Similarity=0.484  Sum_probs=29.5

Q ss_pred             CcEEEEecCCChHHH-----HHHHHHHHcCCeEEEEecC
Q 044923           13 GKVALITGGAGSIGE-----CAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        13 ~k~~lItGas~gIG~-----~ia~~L~~~g~~vi~~~r~   46 (214)
                      +|++.|+|+-||.|+     ++|..|+++|.+|++++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            688999999999996     5788889999999999854

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.33  E-value=0.16  Score=31.82  Aligned_cols=38  Identities=18%  Similarity=0.271  Sum_probs=30.0

Q ss_pred             CccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923            9 PRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus         9 ~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .+++||+|+|.|++ -=|..+|..|++.+.++++..|+.
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            35899999999987 456788999998888876666654

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.05  E-value=1.3  Score=29.43  Aligned_cols=83  Identities=18%  Similarity=0.241  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCC---CHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVT---KEKDIENAVNTAV   88 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~---~~~~~~~~~~~~~   88 (214)
                      +|+++.|.+.|||.|.-++..+.+.|.++--  -+    +++.+.+.+.-+.. ...--+.|++   +.+...++++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~----~~t~~~L~~~lp~~-~~~~NPlD~~~~~~~~~~~~~l~~~~   74 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LE----EKTIEELRSFLPPM-AAVKNPVDMIASARGEDYYRTAKLLL   74 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CC----HHHHHHHHHHSCTT-CEESSEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CC----HHHHHHHHHhCCCc-ccCCCcccccCCCCHHHHHHHHHHHH
Confidence            6889999999999999999999999976632  22    33334443322211 1111245554   4566666666655


Q ss_pred             HHcCCccEEEeCCc
Q 044923           89 SQYGKLDIMFNNAG  102 (214)
Q Consensus        89 ~~~g~id~li~~ag  102 (214)
                      +. +.+|.++....
T Consensus        75 ~d-~~vd~v~v~~~   87 (163)
T d2csua3          75 QD-PNVDMLIAICV   87 (163)
T ss_dssp             HS-TTCSEEEEEEE
T ss_pred             cC-CCcCEEEEeec
Confidence            53 46887665443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.92  E-value=0.25  Score=36.58  Aligned_cols=31  Identities=23%  Similarity=0.350  Sum_probs=26.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGA-KVLIADIKD   47 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~-~vi~~~r~~   47 (214)
                      |+|+|| |-+|.++|.+|+++|. +|.++.++.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            778876 4899999999999997 599988763

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.54  E-value=0.28  Score=33.30  Aligned_cols=37  Identities=32%  Similarity=0.570  Sum_probs=33.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      -+.||+++|.|= |-+|+.+|++|...|++|+++..++
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DP   56 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDP   56 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCc
Confidence            378999999986 5699999999999999999998776

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.46  E-value=0.27  Score=31.44  Aligned_cols=34  Identities=29%  Similarity=0.329  Sum_probs=28.6

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +|.++|.|| |.+|.++|..|++.|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            366777664 7899999999999999999988765

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.39  E-value=0.39  Score=30.38  Aligned_cols=35  Identities=23%  Similarity=0.261  Sum_probs=26.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHc---CCeEEEEecCCc
Q 044923           13 GKVALITGGAGSIGECAARLFSKH---GAKVLIADIKDD   48 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~---g~~vi~~~r~~~   48 (214)
                      .|.++|.|| |.+|.++|..|.+.   |.+|.++.+.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478888887 89999999766654   567888877553

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.01  E-value=0.25  Score=36.27  Aligned_cols=32  Identities=22%  Similarity=0.302  Sum_probs=28.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .|+|.||+ -.|..+|..|+++|.+|+++.+++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            47888887 889999999999999999998765

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=87.99  E-value=0.75  Score=31.61  Aligned_cols=42  Identities=19%  Similarity=0.341  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHc-CCeEEEEecCCcchhhH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKH-GAKVLIADIKDDLGESV   53 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~-g~~vi~~~r~~~~~~~~   53 (214)
                      +.-+|-|.||||-.|.++.+.|.++ ...+..+..+....+..
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~   46 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQF   46 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCH
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCcc
Confidence            3456999999999999999999987 34555555444444443

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.81  E-value=0.9  Score=34.17  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=50.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+||+||-.|++.|+   ++..++++|++ |+.+..++ ..+...+..... +...++.++..|+.+.+-          
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~-~~~~~i~~i~~~~~~l~~----------  101 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELN-GFSDKITLLRGKLEDVHL----------  101 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHT-TCTTTEEEEESCTTTSCC----------
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHh-CccccceEEEeehhhccC----------
Confidence            589999999999885   56677888975 77777664 333333333322 223468888888876421          


Q ss_pred             HcCCccEEEeCCc
Q 044923           90 QYGKLDIMFNNAG  102 (214)
Q Consensus        90 ~~g~id~li~~ag  102 (214)
                      .-.+.|+++..--
T Consensus       102 ~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 PFPKVDIIISEWM  114 (328)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             cccceeEEEEEec
Confidence            0136898887543

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.54  E-value=0.28  Score=34.66  Aligned_cols=34  Identities=21%  Similarity=0.347  Sum_probs=29.0

Q ss_pred             cEEEEecCCChHHH-----HHHHHHHHcCCeEEEEecCC
Q 044923           14 KVALITGGAGSIGE-----CAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        14 k~~lItGas~gIG~-----~ia~~L~~~g~~vi~~~r~~   47 (214)
                      |++.|+++-||.|+     ++|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999999999995     56788999999999987653

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.45  E-value=1.2  Score=28.23  Aligned_cols=81  Identities=14%  Similarity=0.101  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~   90 (214)
                      +..++||.--...+...+.+.|.+.|++|.....-.    +..+.+...     ....+-+|+.-++ +--++++++++.
T Consensus         2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~----~a~~~l~~~-----~~dlii~D~~mp~~~G~el~~~l~~~   72 (123)
T d1krwa_           2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN----EVLAALASK-----TPDVLLSDIRMPGMDGLALLKQIKQR   72 (123)
T ss_dssp             CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH----HHHHHHTTC-----CCSEEEECCSSSSSTTHHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH----HHHHHHHhC-----CCCEEEehhhcCCchHHHHHHHHHHh
Confidence            345799999999999999999999999988654332    333444332     3456677766432 235567788887


Q ss_pred             cCCccEEEeCC
Q 044923           91 YGKLDIMFNNA  101 (214)
Q Consensus        91 ~g~id~li~~a  101 (214)
                      +..+-+++..+
T Consensus        73 ~~~~piI~~t~   83 (123)
T d1krwa_          73 HPMLPVIIMTA   83 (123)
T ss_dssp             SSSCCEEESCC
T ss_pred             CCCCeEEEEec
Confidence            76666665444

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.44  E-value=0.36  Score=32.02  Aligned_cols=36  Identities=19%  Similarity=0.426  Sum_probs=27.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC---CeEEEEecCCcch
Q 044923           15 VALITGGAGSIGECAARLFSKHG---AKVLIADIKDDLG   50 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g---~~vi~~~r~~~~~   50 (214)
                      +|-|.||||-.|.++.+.|.+++   ..+..++.+....
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G   42 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG   42 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC
Confidence            48899999999999999998765   3466665554433

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.28  E-value=1.1  Score=30.84  Aligned_cols=77  Identities=10%  Similarity=0.055  Sum_probs=53.2

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      ++++.||=.|++.|.   .+..|+++|++|+.++.+++.++...+......-  ..+.+...|+.+..-     +     
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~d~~~~~~-----~-----   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL--DNLQTDLVDLNTLTF-----D-----   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--TTEEEEECCTTTCCC-----C-----
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc--cchhhhheecccccc-----c-----
Confidence            355689999997654   5678899999999999988877766655544322  246677778765331     0     


Q ss_pred             cCCccEEEeCCcc
Q 044923           91 YGKLDIMFNNAGI  103 (214)
Q Consensus        91 ~g~id~li~~ag~  103 (214)
                       +..|+++.+.-+
T Consensus        94 -~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 -GEYDFILSTVVM  105 (198)
T ss_dssp             -CCEEEEEEESCG
T ss_pred             -ccccEEEEeeee
Confidence             368998876654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.24  E-value=0.3  Score=35.33  Aligned_cols=32  Identities=19%  Similarity=0.375  Sum_probs=26.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      .|+|+|| |--|...|.+|+++|++|.++-+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            3788888 5678999999999999999987654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=87.20  E-value=0.6  Score=33.36  Aligned_cols=75  Identities=17%  Similarity=0.092  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|.+||-.|+++|--.+   .|++.+.+|+.+..+++..+...+.+...    .++.++..|..+-          ....
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~----~nv~~~~~d~~~g----------~~~~  132 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYY----NNIKLILGDGTLG----------YEEE  132 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTC----SSEEEEESCGGGC----------CGGG
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcc----cccccccCchhhc----------chhh
Confidence            57889999999986544   45566678999988877666555544332    3678888887531          0113


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      ++.|.++.+++.
T Consensus       133 ~pfD~Iiv~~a~  144 (224)
T d1vbfa_         133 KPYDRVVVWATA  144 (224)
T ss_dssp             CCEEEEEESSBB
T ss_pred             hhHHHHHhhcch
Confidence            578999988875

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=87.17  E-value=1.9  Score=28.42  Aligned_cols=32  Identities=9%  Similarity=0.120  Sum_probs=23.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC----CeEEEEecC
Q 044923           15 VALITGGAGSIGECAARLFSKHG----AKVLIADIK   46 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g----~~vi~~~r~   46 (214)
                      ++-|.||||-.|.++.+.|.++.    ..+...+.+
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            48899999999999999887643    345554444

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.09  E-value=0.76  Score=32.26  Aligned_cols=77  Identities=17%  Similarity=0.179  Sum_probs=53.0

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +++++|=.|++.|.-   +..|+++|++|+.++-+++.++...+.+.....  .++.++.+|..+.. .         ..
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~--~~i~~~~~d~~~l~-~---------~~   79 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH--QQVEYVQGDAEQMP-F---------TD   79 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC--CSEEEEECCC-CCC-S---------CT
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccc--cccccccccccccc-c---------cc
Confidence            368899999998854   466788899999999888777666555544332  35788888887642 0         01


Q ss_pred             CCccEEEeCCcc
Q 044923           92 GKLDIMFNNAGI  103 (214)
Q Consensus        92 g~id~li~~ag~  103 (214)
                      +..|+++++...
T Consensus        80 ~~fD~v~~~~~l   91 (231)
T d1vl5a_          80 ERFHIVTCRIAA   91 (231)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccccccccccc
Confidence            368888877665

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=86.98  E-value=1.9  Score=29.07  Aligned_cols=79  Identities=10%  Similarity=0.048  Sum_probs=47.9

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|+.+|=.|+++|.   ++.+.+.+|++++.+..+++..+.+.+.+.....   ...+..   .+.+.   +........
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~---~~~v~~---~~~d~---~~~~~~~~~  108 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL---GARVVA---LPVEV---FLPEAKAQG  108 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC---CCEEEC---SCHHH---HHHHHHHTT
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhcc---ccceee---eehhc---ccccccccC
Confidence            57777777666652   4456677899999998888887777666654422   112222   22222   223333344


Q ss_pred             CCccEEEeCCc
Q 044923           92 GKLDIMFNNAG  102 (214)
Q Consensus        92 g~id~li~~ag  102 (214)
                      .+.|+++.+..
T Consensus       109 ~~fD~If~DPP  119 (171)
T d1ws6a1         109 ERFTVAFMAPP  119 (171)
T ss_dssp             CCEEEEEECCC
T ss_pred             CccceeEEccc
Confidence            57999998854

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=86.91  E-value=0.29  Score=37.10  Aligned_cols=29  Identities=34%  Similarity=0.381  Sum_probs=25.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADI   45 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r   45 (214)
                      ++|.|++-| |..+|.+|++.|.+|+++-+
T Consensus         7 viIVGsG~a-G~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSGPI-GCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcCHH-HHHHHHHHhhCCCeEEEEec
Confidence            788887766 99999999999999999854

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.52  E-value=1.7  Score=34.53  Aligned_cols=80  Identities=16%  Similarity=0.138  Sum_probs=50.5

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHH
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVS   89 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   89 (214)
                      .+.||++.|.|+. ....++++.|.+-|+.++.++-.....++.. ......+.    ..+..|=.|..++.+.+++.  
T Consensus       342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~-~~~~~~~~----~~~i~~d~~~~el~~~i~~~--  413 (477)
T d1m1na_         342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYD-RTMKEMGD----STLLYDDVTGYEFEEFVKRI--  413 (477)
T ss_dssp             HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHH-TTTTTSCT----TCEEEESCBHHHHHHHHHHH--
T ss_pred             hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHH-HHHHhcCC----CcEEecCCCHHHHHHHHHhc--
Confidence            4689999988764 5888999999888999887765433322222 22222211    12234444566777777665  


Q ss_pred             HcCCccEEEeC
Q 044923           90 QYGKLDIMFNN  100 (214)
Q Consensus        90 ~~g~id~li~~  100 (214)
                         ++|+++.+
T Consensus       414 ---~pDL~ig~  421 (477)
T d1m1na_         414 ---KPDLIGSG  421 (477)
T ss_dssp             ---CCSEEEEC
T ss_pred             ---CCCEEEEC
Confidence               78999744

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.38  E-value=0.58  Score=33.27  Aligned_cols=35  Identities=34%  Similarity=0.506  Sum_probs=28.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchh
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGE   51 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~   51 (214)
                      |+|+||+ --|...|..|+++|.+|+++.++.....
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~g~   39 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKLGR   39 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCCCc
Confidence            6788775 5778899999999999999988765443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.08  E-value=0.47  Score=31.99  Aligned_cols=28  Identities=21%  Similarity=0.115  Sum_probs=22.5

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCeEE
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAKVL   41 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~vi   41 (214)
                      ++.++|.|| |.+|.++|..|.+.|.++.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~   30 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGN   30 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceE
Confidence            567777765 7899999999999998743

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.86  E-value=3.5  Score=27.59  Aligned_cols=79  Identities=14%  Similarity=0.090  Sum_probs=41.4

Q ss_pred             EEEEecC-CChHHHHHHHHHHHcC----CeEEEEecCCcc--hhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           15 VALITGG-AGSIGECAARLFSKHG----AKVLIADIKDDL--GESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        15 ~~lItGa-s~gIG~~ia~~L~~~g----~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++.|+|| +.|.+..++..+....    ..+++.+.+++.  ++........... ..+........+|..   +.+   
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~-~~~~~~~~~~~td~~---~al---   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE-KAGVPIEIHLTLDRR---RAL---   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHH-HTTCCCEEEEESCHH---HHH---
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHH-hcCCCceeeecCCch---hhc---
Confidence            4667776 4577777776666542    368899887754  3322211111000 001122223444432   122   


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                          .+-|++|+.||..
T Consensus        76 ----~gaDvVv~ta~~~   88 (169)
T d1s6ya1          76 ----DGADFVTTQFRVG   88 (169)
T ss_dssp             ----TTCSEEEECCCTT
T ss_pred             ----CCCCEEEEccccC
Confidence                2679999999975

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=85.34  E-value=2.4  Score=26.48  Aligned_cols=80  Identities=18%  Similarity=0.110  Sum_probs=52.5

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~g   92 (214)
                      |++||.--..-+...+...|.+.|++|..+....+    ..+.+...     ....+-+|+.-++ +-.+++.++++...
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~----al~~l~~~-----~~dlillD~~mp~~~G~~~~~~~r~~~~   73 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITASDGEE----ALKKAETE-----KPDLIVLDVMLPKLDGIEVCKQLRQQKL   73 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHH----HHHHHHHH-----CCSEEEEESSCSSSCHHHHHHHHHHTTC
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHH----HHHHHhcc-----cccEEEecccccCCCCchhhhhhhccCC
Confidence            67999999999999999999999999887544333    33333332     2345556665433 23456677777766


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      ...+++..+-
T Consensus        74 ~~~ii~lt~~   83 (121)
T d1mvoa_          74 MFPILMLTAK   83 (121)
T ss_dssp             CCCEEEEECT
T ss_pred             CCEEEEEEee
Confidence            6666655443

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.08  E-value=0.54  Score=32.99  Aligned_cols=32  Identities=22%  Similarity=0.292  Sum_probs=27.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ++|+||+.. |...|..+++.|.+|+++.+++.
T Consensus         8 viVIG~GpA-Gl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGGGPA-GYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCcEEEEEecCC
Confidence            788988554 99999999999999999986544

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.07  E-value=0.41  Score=33.82  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHHc
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQY   91 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~   91 (214)
                      +|.+||=.|++.|--......+...| +|+.++.+++.++.+.+.....    .++.++..|..+++.....+       
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~----~ni~~i~~d~~~~~~~~~~~-------  123 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWKYSGIV-------  123 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGGTTTTC-------
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc----CCceEEEeeccCcccccccc-------
Confidence            57899999999885433333333444 8999999988887776665543    25788888988876543222       


Q ss_pred             CCccEEEeCC
Q 044923           92 GKLDIMFNNA  101 (214)
Q Consensus        92 g~id~li~~a  101 (214)
                      ..+|++++..
T Consensus       124 ~~vd~v~~~~  133 (209)
T d1nt2a_         124 EKVDLIYQDI  133 (209)
T ss_dssp             CCEEEEEECC
T ss_pred             ceEEEEEecc
Confidence            3677776653

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.91  E-value=2  Score=29.12  Aligned_cols=30  Identities=20%  Similarity=0.293  Sum_probs=25.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc-CCeEEEE
Q 044923           14 KVALITGGAGSIGECAARLFSKH-GAKVLIA   43 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~-g~~vi~~   43 (214)
                      .+|.|.||||-.|.++.+.|.++ ...+..+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            46899999999999999999987 5665433

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.26  E-value=2.6  Score=28.62  Aligned_cols=83  Identities=12%  Similarity=0.116  Sum_probs=54.5

Q ss_pred             ccCCcEEEEecC-CChHHHHHHHHHHHcCCe-EEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           10 RLQGKVALITGG-AGSIGECAARLFSKHGAK-VLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        10 ~~~~k~~lItGa-s~gIG~~ia~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      .++|+.+|=..+ ||.+|.+    .+.+|+. |+++..+.+..+.+.+.+..... ..++.++..|+.      ++++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~-~~~~~i~~~D~~------~~l~~~  107 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKE-PEKFEVRKMDAN------RALEQF  107 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEESCHH------HHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhc-ccccccccccch------hhhhhh
Confidence            467888776654 4557764    4557875 99999988777777666654322 225777888873      334444


Q ss_pred             HHHcCCccEEEeCCcc
Q 044923           88 VSQYGKLDIMFNNAGI  103 (214)
Q Consensus        88 ~~~~g~id~li~~ag~  103 (214)
                      .+...+.|+++....+
T Consensus       108 ~~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         108 YEEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HHTTCCEEEEEECCCG
T ss_pred             cccCCCcceEEechhh
Confidence            4444579999877654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.03  E-value=0.67  Score=32.22  Aligned_cols=32  Identities=25%  Similarity=0.261  Sum_probs=27.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      ++|+||+ -.|.+.|..+++.|.+|+++.++..
T Consensus         6 vvVIGgG-paGl~aA~~aa~~G~kV~vie~~~~   37 (221)
T d1dxla1           6 VVIIGGG-PGGYVAAIKAAQLGFKTTCIEKRGA   37 (221)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCcEEEEEecCC
Confidence            7889885 5699999999999999999876543

>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Positive regulator of the amidase operon AmiR
domain: Positive regulator of the amidase operon AmiR
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.95  E-value=1.2  Score=30.25  Aligned_cols=82  Identities=7%  Similarity=0.046  Sum_probs=55.3

Q ss_pred             CCCccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHH
Q 044923            7 MSPRLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNT   86 (214)
Q Consensus         7 ~~~~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~   86 (214)
                      +...+++..+||.--...+...+...|.+.|++|..+..-.+.++.             ....+-.|+.-+..--.....
T Consensus         5 ~~~~l~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~al~~-------------~~Dlvl~D~~mp~~~~~~~~~   71 (189)
T d1qo0d_           5 LLGSLRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFDV-------------PVDVVFTSIFQNRHHDEIAAL   71 (189)
T ss_dssp             HHHTGGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSCSS-------------CCSEEEEECCSSTHHHHHHHH
T ss_pred             HHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHHHhccC-------------CCCEEEEcCCCCCcHHHHHHH
Confidence            3446788999999999999999999999999999888665543321             234555666543322233344


Q ss_pred             HHHHcCCccEEEeCC
Q 044923           87 AVSQYGKLDIMFNNA  101 (214)
Q Consensus        87 ~~~~~g~id~li~~a  101 (214)
                      .+...+.+-+++..+
T Consensus        72 ~~~~~p~~pvI~lta   86 (189)
T d1qo0d_          72 LAAGTPRTTLVALVE   86 (189)
T ss_dssp             HHHSCTTCEEEEEEC
T ss_pred             HHHcCCCCCEEEEec
Confidence            555566666666544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.93  E-value=0.94  Score=27.22  Aligned_cols=66  Identities=14%  Similarity=0.172  Sum_probs=41.4

Q ss_pred             EEEecCCChHH-HHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEE-eeCCCHHHHHHHHHHHHHHcCC
Q 044923           16 ALITGGAGSIG-ECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVH-CDVTKEKDIENAVNTAVSQYGK   93 (214)
Q Consensus        16 ~lItGas~gIG-~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~~~~~~~~~~~~g~   93 (214)
                      +-++ |-+|+| .++|+.|.++|++|...++....   ..+.++...     +.+.. -|..+              ...
T Consensus         4 ihfi-GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~G-----i~i~~gh~~~~--------------i~~   60 (89)
T d1j6ua1           4 IHFV-GIGGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLG-----IPIFVPHSADN--------------WYD   60 (89)
T ss_dssp             EEEE-TTTSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTT-----CCEESSCCTTS--------------CCC
T ss_pred             EEEE-eECHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCC-----CeEEeeecccc--------------cCC
Confidence            3344 556777 68999999999999999877532   223344332     22222 22222              136


Q ss_pred             ccEEEeCCccc
Q 044923           94 LDIMFNNAGIV  104 (214)
Q Consensus        94 id~li~~ag~~  104 (214)
                      .|.+|...++.
T Consensus        61 ~d~vV~SsAI~   71 (89)
T d1j6ua1          61 PDLVIKTPAVR   71 (89)
T ss_dssp             CSEEEECTTCC
T ss_pred             CCEEEEecCcC
Confidence            89999999874

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.81  E-value=0.68  Score=32.43  Aligned_cols=37  Identities=16%  Similarity=0.255  Sum_probs=31.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +++||+|+|.|++.- |..+|-.+++.+..+....|+.
T Consensus        29 ~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          29 DFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence            589999999988753 7899999999999977776654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=83.66  E-value=0.38  Score=32.96  Aligned_cols=35  Identities=17%  Similarity=0.150  Sum_probs=29.1

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      +++.++|+||+- .|.+.|..+++.|.+|+++.+..
T Consensus         4 k~~dVvIIGGGp-aGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGP-AGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSH-HHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECCCH-HHHHHHHHHHHcCCceEEEEeec
Confidence            467789998764 88999999999999998887654

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=83.44  E-value=1.7  Score=31.43  Aligned_cols=77  Identities=9%  Similarity=0.064  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCChH-HHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHHHHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSI-GECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEKDIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gI-G~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   90 (214)
                      .|.+||=.|+++|- ...+|+.+. .+.+|+.+.++++.++...+.+...... .++.+...|+.+.-      .     
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~-~nv~~~~~Di~~~~------~-----  151 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI------S-----  151 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC------C-----
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCC-CceEEEEeeeeccc------c-----
Confidence            57899999998773 455555443 3458999999988888887777654332 36888889987621      0     


Q ss_pred             cCCccEEEeCC
Q 044923           91 YGKLDIMFNNA  101 (214)
Q Consensus        91 ~g~id~li~~a  101 (214)
                      -+.+|.++.+.
T Consensus       152 ~~~fD~V~ld~  162 (250)
T d1yb2a1         152 DQMYDAVIADI  162 (250)
T ss_dssp             SCCEEEEEECC
T ss_pred             cceeeeeeecC
Confidence            13689998764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=83.43  E-value=2.3  Score=28.11  Aligned_cols=46  Identities=15%  Similarity=0.306  Sum_probs=32.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcchhhHHHHhhcc
Q 044923           14 KVALITGGAGSIGECAARLFSKH--GAKVLIADIKDDLGESVCEDISSS   60 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~   60 (214)
                      |++.|.|+||-||.....-+.+.  .++|+.+.-+. +.+.+.+...+.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef   50 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRT   50 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhh
Confidence            89999999999999999988775  47766554332 334444444443

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.22  E-value=1.1  Score=28.97  Aligned_cols=35  Identities=26%  Similarity=0.297  Sum_probs=27.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHH----cCCeEEEEecCCc
Q 044923           13 GKVALITGGAGSIGECAARLFSK----HGAKVLIADIKDD   48 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~----~g~~vi~~~r~~~   48 (214)
                      .|+++|.|| |.+|.++|..|++    .|.+|.++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578888865 8899999988864    5889988877553

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=83.22  E-value=1.6  Score=27.27  Aligned_cols=35  Identities=37%  Similarity=0.357  Sum_probs=26.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHc---CCeEEEEecCCc
Q 044923           13 GKVALITGGAGSIGECAARLFSKH---GAKVLIADIKDD   48 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~---g~~vi~~~r~~~   48 (214)
                      .|.++|.|| |.+|.++|..|++.   |.+|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            477888876 68999999876654   788888877653

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=83.17  E-value=3.2  Score=26.07  Aligned_cols=81  Identities=9%  Similarity=0.016  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHH
Q 044923           12 QGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQ   90 (214)
Q Consensus        12 ~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~   90 (214)
                      ++.++||.--...+...+.+.|.+.|++|.... +   .++..+.+.+.     ....+-+|+.-++ +--++++++++.
T Consensus         2 ~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~---~~~al~~~~~~-----~~dlvi~D~~mp~~~G~e~~~~lr~~   72 (123)
T d1dbwa_           2 QDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQ-S---AEAFLAFAPDV-----RNGVLVTDLRMPDMSGVELLRNLGDL   72 (123)
T ss_dssp             CCCEEEEEESSHHHHHHHHHHHHHTTCEEEEES-C---HHHHHHHGGGC-----CSEEEEEECCSTTSCHHHHHHHHHHT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-C---HHHHHHHHhhc-----CCcEEEEeccCccccchHHHHHHHhc
Confidence            456899999999999999999999999986543 2   23333444332     3456667776432 245677888877


Q ss_pred             cCCccEEEeCC
Q 044923           91 YGKLDIMFNNA  101 (214)
Q Consensus        91 ~g~id~li~~a  101 (214)
                      ...+-+++..+
T Consensus        73 ~~~~~iI~lt~   83 (123)
T d1dbwa_          73 KINIPSIVITG   83 (123)
T ss_dssp             TCCCCEEEEEC
T ss_pred             CCCCeEEEEEe
Confidence            66666666543

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.16  E-value=0.76  Score=31.95  Aligned_cols=30  Identities=27%  Similarity=0.337  Sum_probs=26.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      ++|+|| |-.|.+.|..+++.|.+|.++.+.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            688887 778999999999999999999764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=83.08  E-value=0.73  Score=30.71  Aligned_cols=26  Identities=15%  Similarity=0.438  Sum_probs=22.7

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGA   38 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~   38 (214)
                      |=+|-|.||||-.|.++.+.|.++.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            34689999999999999999998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.90  E-value=0.89  Score=28.91  Aligned_cols=32  Identities=16%  Similarity=0.181  Sum_probs=27.0

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            55666665 789999999999999999888765

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=82.65  E-value=0.74  Score=33.22  Aligned_cols=30  Identities=33%  Similarity=0.560  Sum_probs=26.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIK   46 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~   46 (214)
                      ++|+||+.+ |...|.++++.|.+|.++.+.
T Consensus         4 viVIG~G~a-G~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSG-GMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence            688888776 999999999999999999875

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=82.62  E-value=1.8  Score=27.18  Aligned_cols=81  Identities=12%  Similarity=0.080  Sum_probs=54.9

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHHcC
Q 044923           14 KVALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQYG   92 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~g   92 (214)
                      .++||.--..-+...+...|.+.|++|.......+..    +.+.+..    ....+-+|+.-++ +--++++++++...
T Consensus         3 ~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al----~~l~~~~----~~dliilD~~lp~~~G~el~~~ir~~~~   74 (118)
T d2b4aa1           3 FRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFF----QHRSQLS----TCDLLIVSDQLVDLSIFSLLDIVKEQTK   74 (118)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HTGGGGG----SCSEEEEETTCTTSCHHHHHHHHTTSSS
T ss_pred             CEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHH----HHHHhcC----CCCEEEEeCCCCCCCHHHHHHHHHhcCC
Confidence            4588888999999999999999999988765433322    2222211    2456667776544 35677888887766


Q ss_pred             CccEEEeCCc
Q 044923           93 KLDIMFNNAG  102 (214)
Q Consensus        93 ~id~li~~ag  102 (214)
                      .+-+++..+.
T Consensus        75 ~~pii~lt~~   84 (118)
T d2b4aa1          75 QPSVLILTTG   84 (118)
T ss_dssp             CCEEEEEESC
T ss_pred             CCcEEEEECC
Confidence            6767776543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=82.48  E-value=5.2  Score=26.79  Aligned_cols=77  Identities=16%  Similarity=0.158  Sum_probs=42.6

Q ss_pred             EEEEecCCChHH--HHHHHHHHHc----CCeEEEEecCCcchhhHHHHhhccCC-CCCCceEEEeeCCCHHHHHHHHHHH
Q 044923           15 VALITGGAGSIG--ECAARLFSKH----GAKVLIADIKDDLGESVCEDISSSSS-SANGCSYVHCDVTKEKDIENAVNTA   87 (214)
Q Consensus        15 ~~lItGas~gIG--~~ia~~L~~~----g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~   87 (214)
                      ++.|+|| |.+|  .++...|+..    +..+++.+.++++++.....+..... ......+.  -.+|.   ++.++  
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~--~~td~---~eaL~--   75 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE--KTMNL---DDVII--   75 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE--EESCH---HHHHT--
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE--EeCCh---hhccc--
Confidence            5677776 4444  4455555543    34799999998887765554443211 00111221  12222   22233  


Q ss_pred             HHHcCCccEEEeCCccc
Q 044923           88 VSQYGKLDIMFNNAGIV  104 (214)
Q Consensus        88 ~~~~g~id~li~~ag~~  104 (214)
                           +.|++|+.++..
T Consensus        76 -----dad~Vv~~~~~g   87 (171)
T d1obba1          76 -----DADFVINTAMVG   87 (171)
T ss_dssp             -----TCSEEEECCCTT
T ss_pred             -----CCCeEeeecccc
Confidence                 789999998875

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.43  E-value=3  Score=26.15  Aligned_cols=79  Identities=11%  Similarity=0.030  Sum_probs=53.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhHHHHhhccCCCCCCceEEEeeCCCHH-HHHHHHHHHHHHcCC
Q 044923           15 VALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESVCEDISSSSSSANGCSYVHCDVTKEK-DIENAVNTAVSQYGK   93 (214)
Q Consensus        15 ~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~g~   93 (214)
                      ++||.--...+...+.+.|.+.|+.|.....-    ++..+.+...     ....+-+|+.-++ +--++++++++....
T Consensus         3 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~----~eal~~~~~~-----~~dlvl~D~~mP~~~G~el~~~ir~~~~~   73 (121)
T d1ys7a2           3 RVLVVDDDSDVLASLERGLRLSGFEVATAVDG----AEALRSATEN-----RPDAIVLDINMPVLDGVSVVTALRAMDND   73 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEESSH----HHHHHHHHHS-----CCSEEEEESSCSSSCHHHHHHHHHHTTCC
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCH----HHHHHHHHhC-----CCCEEEEEeeccCcccHHHHHHHHhcCCC
Confidence            58888888899999999999999998865433    3333344332     2456677766433 345677888887666


Q ss_pred             ccEEEeCCc
Q 044923           94 LDIMFNNAG  102 (214)
Q Consensus        94 id~li~~ag  102 (214)
                      +-+++..+-
T Consensus        74 ~piI~lt~~   82 (121)
T d1ys7a2          74 VPVCVLSAR   82 (121)
T ss_dssp             CCEEEEECC
T ss_pred             CEEEEEEee
Confidence            767766544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.11  E-value=2.1  Score=28.26  Aligned_cols=34  Identities=24%  Similarity=0.253  Sum_probs=25.2

Q ss_pred             CcEEEEecCCChHHHHHHHHHHHcCCe-EEEEecCC
Q 044923           13 GKVALITGGAGSIGECAARLFSKHGAK-VLIADIKD   47 (214)
Q Consensus        13 ~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r~~   47 (214)
                      +++|+|+| +|-.|...|..+.+.|++ |.++.|+.
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            44566664 567888999999999987 66776653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.95  E-value=0.51  Score=38.33  Aligned_cols=34  Identities=15%  Similarity=0.107  Sum_probs=28.7

Q ss_pred             cCCcEEEEecCCChHHHHHHHHHHHcCCe-EEEEec
Q 044923           11 LQGKVALITGGAGSIGECAARLFSKHGAK-VLIADI   45 (214)
Q Consensus        11 ~~~k~~lItGas~gIG~~ia~~L~~~g~~-vi~~~r   45 (214)
                      +.+.+|+|.|+ ||+|.++++-|+..|.. +.+++.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            56788999987 79999999999999975 777654

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.82  E-value=1.1  Score=28.72  Aligned_cols=38  Identities=18%  Similarity=0.268  Sum_probs=32.0

Q ss_pred             ccCCcEEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Q 044923           10 RLQGKVALITGGAGSIGECAARLFSKHGAKVLIADIKDD   48 (214)
Q Consensus        10 ~~~~k~~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~   48 (214)
                      .++||.++|.|+ |--+..-|..|++...+|.++.|.++
T Consensus        24 ~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          24 FYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             GGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             HhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            468999999998 66778888899988888999988653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.72  E-value=0.74  Score=34.53  Aligned_cols=34  Identities=15%  Similarity=0.228  Sum_probs=24.2

Q ss_pred             cEEEEecCCChHHHHHHHHHHHcC--CeEEEEecCCc
Q 044923           14 KVALITGGAGSIGECAARLFSKHG--AKVLIADIKDD   48 (214)
Q Consensus        14 k~~lItGas~gIG~~ia~~L~~~g--~~vi~~~r~~~   48 (214)
                      |+|+|+||+ -=|...|..|+++|  .+|++.-|+..
T Consensus         5 KrVaIIGaG-~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAG-PSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcC-HHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            678888765 33456777888876  47988887754

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.58  E-value=0.62  Score=32.85  Aligned_cols=31  Identities=32%  Similarity=0.489  Sum_probs=26.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ++|+||+.+ |...|..+++.|.+|+++.+.+
T Consensus         6 viVIG~Gpa-Gl~aA~~aa~~G~kV~viE~~~   36 (235)
T d1h6va1           6 LIIIGGGSG-GLAAAKEAAKFDKKVMVLDFVT   36 (235)
T ss_dssp             EEEECCSHH-HHHHHHHHGGGCCCEEEECCCC
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEeccC
Confidence            788988776 9999999999999999987543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.46  E-value=1.2  Score=31.72  Aligned_cols=37  Identities=24%  Similarity=0.415  Sum_probs=28.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      ++|+||+ .-|...|..|+++|.+|+++.+++.....+
T Consensus         7 ViIIGaG-~aGl~aA~~la~~G~~V~vlEk~~~~G~k~   43 (253)
T d2gqfa1           7 NIIIGAG-AAGLFCAAQLAKLGKSVTVFDNGKKIGRKI   43 (253)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence            7777764 456788889999999999999887665443

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.41  E-value=1.5  Score=27.65  Aligned_cols=34  Identities=15%  Similarity=0.214  Sum_probs=29.0

Q ss_pred             cEEEEecCC---ChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           14 KVALITGGA---GSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        14 k~~lItGas---~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      |.+.|.|+|   +-.|..+.+.|.+.|++|+.+..+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~   38 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY   38 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccc
Confidence            788999999   4589999999999999988876543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.40  E-value=0.81  Score=33.82  Aligned_cols=31  Identities=29%  Similarity=0.607  Sum_probs=25.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      |+|+||+ --|...|..|+++|.+|+++-++.
T Consensus         2 ViVIGaG-~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGG-ISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCB-HHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCC-HHHHHHHHHHHhCCCCEEEEecCC
Confidence            6778775 448889999999999999987654

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.17  E-value=6.6  Score=27.17  Aligned_cols=90  Identities=11%  Similarity=0.080  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCChHHH-----HHHHHHHHcC-----CeEEEEecCCcchhhHHHHhhccCCC-----------CCCceEE
Q 044923           12 QGKVALITGGAGSIGE-----CAARLFSKHG-----AKVLIADIKDDLGESVCEDISSSSSS-----------ANGCSYV   70 (214)
Q Consensus        12 ~~k~~lItGas~gIG~-----~ia~~L~~~g-----~~vi~~~r~~~~~~~~~~~~~~~~~~-----------~~~v~~~   70 (214)
                      +.-+.+|-||||.+-+     ++- .|...|     .+|+.++|++-..++..+.+......           ...+.++
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf-~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~   97 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIW-WLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYV   97 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHH-HHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECC
T ss_pred             CCcEEEEECcccHHHHhHHHHHHH-HHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccc
Confidence            4567899999999884     222 233333     56888899876555555544332111           1245678


Q ss_pred             EeeCCCHHHHHHHHHHHHHHc-C-CccEEEeCCc
Q 044923           71 HCDVTKEKDIENAVNTAVSQY-G-KLDIMFNNAG  102 (214)
Q Consensus        71 ~~D~~~~~~~~~~~~~~~~~~-g-~id~li~~ag  102 (214)
                      .+|++|+++..++-+.+.+.. + .-+.+++-|=
T Consensus        98 ~~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1          98 AGQYDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             BCCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             cCcCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            899999999888877665532 1 2345555544

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.95  E-value=0.95  Score=31.34  Aligned_cols=31  Identities=29%  Similarity=0.337  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKD   47 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~   47 (214)
                      ++|+||+ ..|...|..+++.|.+|+++.+..
T Consensus         6 viVIG~G-paGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGAG-PGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCEEEEEecCC
Confidence            6788864 459999999999999999997653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.72  E-value=0.68  Score=31.97  Aligned_cols=36  Identities=25%  Similarity=0.350  Sum_probs=27.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEecCCcchhhH
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADIKDDLGESV   53 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r~~~~~~~~   53 (214)
                      +.|.| .|-+|..+|..|+ +|++|+..+-+++..+.+
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            45555 8999999998776 699999998887655444

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=80.61  E-value=0.8  Score=34.63  Aligned_cols=29  Identities=17%  Similarity=0.316  Sum_probs=23.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEec
Q 044923           16 ALITGGAGSIGECAARLFSKHGAKVLIADI   45 (214)
Q Consensus        16 ~lItGas~gIG~~ia~~L~~~g~~vi~~~r   45 (214)
                      |||+|++ -=|..+|.+|+++|.+|+++-+
T Consensus         5 VIVVGsG-~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIGTG-YGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeCcC-HHHHHHHHHHHHCcCeEEEEec
Confidence            6777654 4588999999999999999865