BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044925
         (103 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|15238555|ref|NP_197839.1| large subunit ribosomal protein LP1 [Arabidopsis thaliana]
 gi|10177851|dbj|BAB11203.1| 60s acidic ribosomal protein P1 [Arabidopsis thaliana]
 gi|67633816|gb|AAY78832.1| putative 60S acidic ribosomal protein P1 [Arabidopsis thaliana]
 gi|332005935|gb|AED93318.1| large subunit ribosomal protein LP1 [Arabidopsis thaliana]
          Length = 111

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 40  KLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEE---TKEESDDD 96
           KL EK++ D+L +NVG+GG    VA P   ++     +++   EEKK E    KEES+DD
Sbjct: 48  KLCEKKNIDDLIMNVGAGGC--GVARPVTTAAPTASQSVSIP-EEKKNEMEVIKEESEDD 104

Query: 97  MGLSLFD 103
           M + LFD
Sbjct: 105 MIIGLFD 111


>gi|297819582|ref|XP_002877674.1| hypothetical protein ARALYDRAFT_906225 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323512|gb|EFH53933.1| hypothetical protein ARALYDRAFT_906225 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 125

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 38  LIKLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAV--EEKKEETKEESDD 95
           L KLF+ ++ D+L +N  +GG+  +  A + +SS  G A  AA V  E+ KE+ KEESDD
Sbjct: 46  LAKLFQNKNMDDLIMNASAGGSAGSPRAVSSSSSSFGSATQAAPVAEEKNKEDVKEESDD 105

Query: 96  DMGLSLFD 103
           D     FD
Sbjct: 106 DFVSGFFD 113


>gi|268567251|ref|XP_002639930.1| Hypothetical protein CBG08266 [Caenorhabditis briggsae]
          Length = 110

 Score = 43.1 bits (100), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 9/77 (11%)

Query: 33  EKIATLIKLFEKRSADELYLNVGSGGAHLA-----VAAPAVASSGLGGAALAAAVEE-KK 86
           E +  ++   E ++ +EL   + +G A LA     V A + A+   GGAA AA  +  KK
Sbjct: 37  ESVNLVVSGLEGKNIEEL---IAAGSAKLATISGGVGAASSAAPVTGGAAPAADNKPAKK 93

Query: 87  EETKEESDDDMGLSLFD 103
           EE KEESDDDMG  LFD
Sbjct: 94  EEPKEESDDDMGFGLFD 110


>gi|224132596|ref|XP_002321361.1| predicted protein [Populus trichocarpa]
 gi|222868357|gb|EEF05488.1| predicted protein [Populus trichocarpa]
          Length = 110

 Score = 42.7 bits (99), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 40  KLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETKEESDDDMGL 99
           KL EKR+  +L +N+G+        A +  ++G   AA A AVEEKKEE   ESDDDMG 
Sbjct: 48  KLAEKRNVGDLIMNIGAAAPVAVAVASSGPAAGGAAAAAAPAVEEKKEEAP-ESDDDMGF 106

Query: 100 SLFD 103
           SLFD
Sbjct: 107 SLFD 110


>gi|225426544|ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera]
 gi|297742458|emb|CBI34607.3| unnamed protein product [Vitis vinifera]
          Length = 111

 Score = 41.2 bits (95), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 42/64 (65%)

Query: 40  KLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETKEESDDDMGL 99
           KL EK+S D+L +NVGSGG    +A   +A  G    A A   EEKKEE KEESD+DMG 
Sbjct: 48  KLVEKKSVDDLIMNVGSGGGGAPMAVATMAGGGDAAGAAAPPPEEKKEEPKEESDEDMGF 107

Query: 100 SLFD 103
           SLFD
Sbjct: 108 SLFD 111


>gi|356539947|ref|XP_003538454.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
          Length = 320

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 25/31 (80%), Gaps = 3/31 (9%)

Query: 75  GAALAAA--VEEKKEETKEESDDDMGLSLFD 103
           GAA AAA  VEEKKEE  +ESDDDMG SLFD
Sbjct: 291 GAAPAAASKVEEKKEEA-DESDDDMGFSLFD 320


>gi|147852087|emb|CAN80177.1| hypothetical protein VITISV_018396 [Vitis vinifera]
          Length = 111

 Score = 39.7 bits (91), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 16/88 (18%)

Query: 32  PEKIATLIK----------------LFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGG 75
           PEKI TL+K                L EKR+ ++L  NVGSGG    V+A A A+ G   
Sbjct: 24  PEKINTLVKAAKVEVESYWPALFAKLVEKRNVEDLIANVGSGGGGAPVSAAAPAAGGASA 83

Query: 76  AALAAAVEEKKEETKEESDDDMGLSLFD 103
           AA A  VEEKKEE KEESDDDMG SLFD
Sbjct: 84  AAAAPVVEEKKEEPKEESDDDMGFSLFD 111


>gi|359490741|ref|XP_003634150.1| PREDICTED: 60S acidic ribosomal protein P1-2-like [Vitis vinifera]
 gi|302143976|emb|CBI23081.3| unnamed protein product [Vitis vinifera]
          Length = 111

 Score = 39.7 bits (91), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 16/88 (18%)

Query: 32  PEKIATLIK----------------LFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGG 75
           PEKI TL+K                L EKR+ ++L  NVGSGG    V+A A A+ G   
Sbjct: 24  PEKINTLVKAAKVEVESYWPALFAKLVEKRNVEDLIANVGSGGGGAPVSAAAPAAGGASA 83

Query: 76  AALAAAVEEKKEETKEESDDDMGLSLFD 103
           AA A  VEEKKEE KEESDDDMG SLFD
Sbjct: 84  AAAAPVVEEKKEEPKEESDDDMGFSLFD 111


>gi|388582514|gb|EIM22818.1| ribosomal protein 60S [Wallemia sebi CBS 633.66]
          Length = 106

 Score = 37.7 bits (86), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 17/19 (89%), Positives = 17/19 (89%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMGL LFD
Sbjct: 88  KKEEAKEESDDDMGLGLFD 106


>gi|118481776|gb|ABK92827.1| unknown [Populus trichocarpa]
          Length = 110

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 40  KLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETKEESDDDMGL 99
           KL EKR+  +L +N+G+GG   A      +S+    +A A AVEEKKEE   ESDDDMG 
Sbjct: 48  KLAEKRNVGDLIMNIGAGGGGGAAPIAVSSSAPAAASAAAPAVEEKKEEAP-ESDDDMGF 106

Query: 100 SLFD 103
           SLFD
Sbjct: 107 SLFD 110


>gi|255566866|ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
 gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
          Length = 110

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/87 (52%), Positives = 52/87 (59%), Gaps = 17/87 (19%)

Query: 33  EKIATLIK----------------LFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGA 76
           EKIATL+K                L EK++ D+L +NVGSGG    VA  A A+     A
Sbjct: 25  EKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVMNVGSGGGAAPVAVSAPAAGAGA-A 83

Query: 77  ALAAAVEEKKEETKEESDDDMGLSLFD 103
           A A AVEEKKEE KEESDDDMG SLFD
Sbjct: 84  AAAPAVEEKKEEPKEESDDDMGFSLFD 110


>gi|255571675|ref|XP_002526781.1| hypothetical protein RCOM_0625640 [Ricinus communis]
 gi|223533857|gb|EEF35587.1| hypothetical protein RCOM_0625640 [Ricinus communis]
          Length = 91

 Score = 37.0 bits (84), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 20/26 (76%), Gaps = 1/26 (3%)

Query: 79  AAAVEE-KKEETKEESDDDMGLSLFD 103
           A A EE KKEE  EESDDD+G SLFD
Sbjct: 66  APATEENKKEEPAEESDDDIGFSLFD 91


>gi|341902715|gb|EGT58650.1| hypothetical protein CAEBREN_18564 [Caenorhabditis brenneri]
          Length = 104

 Score = 37.0 bits (84), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 33  EKIATLIKLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETKEE 92
           EK+  ++   + ++  E+   +  G + LA      A+        A +   KKEE KEE
Sbjct: 37  EKVNAVVSAMQGKTLSEV---ITEGKSKLAAVPSGEAAPTSKAQPPADSKPAKKEEQKEE 93

Query: 93  SDDDMGLSLFD 103
           SDDDMG  LFD
Sbjct: 94  SDDDMGFGLFD 104


>gi|268574650|ref|XP_002642304.1| Hypothetical protein CBG18296 [Caenorhabditis briggsae]
          Length = 110

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 92  KKEEPKEESDDDMGFGLFD 110


>gi|268552467|ref|XP_002634216.1| Hypothetical protein CBG01785 [Caenorhabditis briggsae]
          Length = 110

 Score = 36.6 bits (83), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 92  KKEEPKEESDDDMGFGLFD 110


>gi|17543850|ref|NP_502571.1| Protein RLA-2 [Caenorhabditis elegans]
 gi|6425493|emb|CAB60595.1| Protein RLA-2 [Caenorhabditis elegans]
          Length = 110

 Score = 36.2 bits (82), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 92  KKEEPKEESDDDMGFGLFD 110


>gi|350580953|ref|XP_003354274.2| PREDICTED: 60S acidic ribosomal protein P1-like [Sus scrofa]
          Length = 113

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 10/70 (14%)

Query: 41  LFEKRSAD----ELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETK----EE 92
           LF K  A+     L  NVG+GG     AA A  S G      AA  E+KK E K    EE
Sbjct: 34  LFAKALANINIHNLICNVGAGGP--VPAAGATPSGGPDPVTTAAPREDKKVEAKKENSEE 91

Query: 93  SDDDMGLSLF 102
           SDD+ G  LF
Sbjct: 92  SDDNKGFGLF 101


>gi|268552463|ref|XP_002634214.1| C. briggsae CBR-RLA-2 protein [Caenorhabditis briggsae]
          Length = 111

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 93  KKEEPKEESDDDMGFGLFD 111


>gi|308492455|ref|XP_003108418.1| CRE-RLA-2 protein [Caenorhabditis remanei]
 gi|308249266|gb|EFO93218.1| CRE-RLA-2 protein [Caenorhabditis remanei]
          Length = 160

 Score = 35.8 bits (81), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 142 KKEEPKEESDDDMGFGLFD 160


>gi|6984134|gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphorbia esula]
          Length = 317

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/21 (71%), Positives = 18/21 (85%)

Query: 83  EEKKEETKEESDDDMGLSLFD 103
           EEKK+E  +ESDDD+G SLFD
Sbjct: 297 EEKKDEPADESDDDLGFSLFD 317


>gi|308478118|ref|XP_003101271.1| hypothetical protein CRE_14104 [Caenorhabditis remanei]
 gi|308263976|gb|EFP07929.1| hypothetical protein CRE_14104 [Caenorhabditis remanei]
          Length = 107

 Score = 35.8 bits (81), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 89  KKEEPKEESDDDMGFGLFD 107


>gi|344291955|ref|XP_003417694.1| PREDICTED: 60S acidic ribosomal protein P1-like [Loxodonta
           africana]
          Length = 115

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 12/78 (15%)

Query: 33  EKIATLIKLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAA---LAAAVEEKKEET 89
           +K   LIK  +  +   L  NVG+G       APA + +  GG A    AA VE+KK E 
Sbjct: 43  DKTNALIKAADNMNIRSLTCNVGAGEP-----APASSVAPAGGPAPSTTAAPVEDKKVEA 97

Query: 90  K----EESDDDMGLSLFD 103
           K    EE +DD    LFD
Sbjct: 98  KKEKPEEFNDDARFGLFD 115


>gi|227111335|ref|ZP_03824991.1| catalase [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 514

 Score = 35.4 bits (80), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 3   VQYMDTVQIFWP--HNTIDSGLVEFSFFTSQPEKIATLIKLFEKRSADELYLNVGSGGAH 60
           +++ D V  F P     +D     F FF+  PE I TL  L+        Y N+   G H
Sbjct: 164 IKFPDMVHAFKPDPRTNLDDDARRFDFFSHVPESIRTLTLLYSNEGTPATYRNMDGNGVH 223


>gi|308454627|ref|XP_003089923.1| hypothetical protein CRE_12399 [Caenorhabditis remanei]
 gi|308267786|gb|EFP11739.1| hypothetical protein CRE_12399 [Caenorhabditis remanei]
          Length = 107

 Score = 35.4 bits (80), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 89  KKEEPKEESDDDMGFGLFD 107


>gi|100913250|gb|ABF69522.1| acidic ribosomal protein P0 [Pristionchus pacificus]
          Length = 165

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 15/18 (83%), Positives = 15/18 (83%)

Query: 86  KEETKEESDDDMGLSLFD 103
           KEE KEESDDDMG  LFD
Sbjct: 148 KEEPKEESDDDMGFGLFD 165


>gi|328874599|gb|EGG22964.1| ribosomal acidic phosphoprotein P0 [Dictyostelium fasciculatum]
          Length = 702

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 15/18 (83%), Positives = 16/18 (88%)

Query: 86  KEETKEESDDDMGLSLFD 103
           KEE KEESDDDMG+ LFD
Sbjct: 685 KEEPKEESDDDMGMGLFD 702


>gi|308454629|ref|XP_003089924.1| hypothetical protein CRE_12398 [Caenorhabditis remanei]
 gi|308478066|ref|XP_003101245.1| hypothetical protein CRE_14151 [Caenorhabditis remanei]
 gi|308263950|gb|EFP07903.1| hypothetical protein CRE_14151 [Caenorhabditis remanei]
 gi|308267787|gb|EFP11740.1| hypothetical protein CRE_12398 [Caenorhabditis remanei]
          Length = 107

 Score = 35.4 bits (80), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 16/19 (84%), Positives = 16/19 (84%)

Query: 85  KKEETKEESDDDMGLSLFD 103
           KKEE KEESDDDMG  LFD
Sbjct: 89  KKEEPKEESDDDMGFGLFD 107


>gi|341877128|gb|EGT33063.1| hypothetical protein CAEBREN_11301 [Caenorhabditis brenneri]
          Length = 107

 Score = 34.7 bits (78), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 14/77 (18%)

Query: 34  KIATLIKLFEKRSADEL-------YLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKK 86
           +I +++ L + +  ++L        ++V +GGA    +AP   ++    AA       K+
Sbjct: 38  RINSVVTLLQGKKVNDLVAEGLTKLVSVSTGGAPSTSSAPRDIAADNQPAA-------KQ 90

Query: 87  EETKEESDDDMGLSLFD 103
            E KEESD+DMG  LFD
Sbjct: 91  NEPKEESDEDMGFGLFD 107


>gi|168040264|ref|XP_001772615.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676170|gb|EDQ62657.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 110

 Score = 34.7 bits (78), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 40  KLFEKRSADELYLNVGSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETKEESDDDMGL 99
           KL EKRS D+L  NVG GG     A    A+     A  A  VEEKKEE KEESDDDMG 
Sbjct: 48  KLCEKRSVDDLITNVG-GGKCGGAAVAVSAAPASSAADEAPQVEEKKEEPKEESDDDMGF 106

Query: 100 SLFD 103
           SLFD
Sbjct: 107 SLFD 110


>gi|160948316|emb|CAO94759.1| putative ribosomal protein P2 [Pomphorhynchus laevis]
          Length = 115

 Score = 34.3 bits (77), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 25/49 (51%)

Query: 55  GSGGAHLAVAAPAVASSGLGGAALAAAVEEKKEETKEESDDDMGLSLFD 103
           G     L V+  AV +     AA   A +E   E  +ESDDDMGL LFD
Sbjct: 67  GVASGSLPVSGDAVVADSGKPAASTVATKEAPTEESDESDDDMGLGLFD 115


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.130    0.361 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,573,413,133
Number of Sequences: 23463169
Number of extensions: 57159243
Number of successful extensions: 277498
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 369
Number of HSP's that attempted gapping in prelim test: 270461
Number of HSP's gapped (non-prelim): 2239
length of query: 103
length of database: 8,064,228,071
effective HSP length: 72
effective length of query: 31
effective length of database: 6,374,879,903
effective search space: 197621276993
effective search space used: 197621276993
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)