Query 044926
Match_columns 569
No_of_seqs 186 out of 2247
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 08:07:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044926.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044926hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 3.1E-82 6.7E-87 635.5 51.3 524 1-557 3-536 (537)
2 KOG1177 Long chain fatty acid 100.0 6.9E-79 1.5E-83 567.5 45.1 517 10-554 46-588 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 9.1E-77 2E-81 619.2 55.0 515 7-553 4-527 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 2.1E-75 4.5E-80 582.6 45.8 495 18-553 13-522 (528)
5 COG1021 EntE Peptide arylation 100.0 4.2E-74 9.2E-79 523.3 34.9 507 10-554 24-539 (542)
6 PLN02860 o-succinylbenzoate-Co 100.0 6.4E-72 1.4E-76 590.6 53.6 527 8-555 1-556 (563)
7 PRK07788 acyl-CoA synthetase; 100.0 1E-71 2.2E-76 588.4 53.7 499 14-550 49-548 (549)
8 PLN03102 acyl-activating enzym 100.0 3.9E-71 8.3E-76 585.3 56.7 535 8-555 8-556 (579)
9 PTZ00237 acetyl-CoA synthetase 100.0 4.2E-71 9.1E-76 589.9 50.5 523 15-554 60-624 (647)
10 PLN02654 acetate-CoA ligase 100.0 4E-70 8.6E-75 584.3 53.8 522 14-554 87-641 (666)
11 TIGR02316 propion_prpE propion 100.0 5.5E-70 1.2E-74 582.0 53.6 517 17-554 55-605 (628)
12 PRK07529 AMP-binding domain pr 100.0 2.3E-69 4.9E-74 576.8 57.4 519 11-553 22-570 (632)
13 PRK08314 long-chain-fatty-acid 100.0 2.7E-69 5.9E-74 570.4 56.7 528 6-555 2-544 (546)
14 PLN02736 long-chain acyl-CoA s 100.0 3.3E-70 7.2E-75 585.7 47.9 520 11-555 41-643 (651)
15 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.3E-69 5E-74 578.3 53.9 515 15-554 58-603 (625)
16 PRK13295 cyclohexanecarboxylat 100.0 1.4E-68 3.1E-73 563.9 57.7 508 6-553 16-544 (547)
17 PRK06334 long chain fatty acid 100.0 3E-69 6.5E-74 565.9 51.9 499 11-554 16-536 (539)
18 PRK13382 acyl-CoA synthetase; 100.0 1.7E-68 3.7E-73 561.3 55.0 494 13-549 42-536 (537)
19 PLN02246 4-coumarate--CoA liga 100.0 2.3E-68 4.9E-73 561.4 55.9 507 12-553 21-536 (537)
20 PRK00174 acetyl-CoA synthetase 100.0 2.4E-68 5.2E-73 571.3 54.8 512 17-554 70-611 (637)
21 PRK06839 acyl-CoA synthetase; 100.0 2.3E-68 5E-73 557.2 53.3 491 15-553 3-495 (496)
22 PLN02574 4-coumarate--CoA liga 100.0 1.8E-68 3.9E-73 564.0 52.6 508 13-557 39-558 (560)
23 PRK07008 long-chain-fatty-acid 100.0 7.3E-68 1.6E-72 557.1 56.5 527 7-557 3-537 (539)
24 PRK07656 long-chain-fatty-acid 100.0 5.7E-68 1.2E-72 556.8 55.2 507 12-549 3-512 (513)
25 PRK05677 long-chain-fatty-acid 100.0 5.9E-68 1.3E-72 560.7 55.2 518 14-554 24-558 (562)
26 PRK03640 O-succinylbenzoic aci 100.0 4.2E-68 9E-73 553.2 52.5 481 14-553 2-482 (483)
27 PRK06155 crotonobetaine/carnit 100.0 7.2E-68 1.6E-72 556.7 54.4 505 10-554 17-525 (542)
28 PRK06187 long-chain-fatty-acid 100.0 1.7E-67 3.6E-72 554.7 55.7 519 9-554 1-520 (521)
29 PRK08162 acyl-CoA synthetase; 100.0 2.7E-67 5.8E-72 554.9 57.3 536 4-557 8-543 (545)
30 PRK07470 acyl-CoA synthetase; 100.0 1.5E-67 3.3E-72 554.5 55.0 515 9-556 2-521 (528)
31 PLN02614 long-chain acyl-CoA s 100.0 1.7E-68 3.6E-73 570.6 45.9 516 14-555 45-651 (666)
32 PLN02330 4-coumarate--CoA liga 100.0 1.9E-67 4.1E-72 555.2 53.2 511 12-557 26-545 (546)
33 PRK05605 long-chain-fatty-acid 100.0 2.6E-67 5.7E-72 557.7 54.4 521 12-554 30-570 (573)
34 PRK04319 acetyl-CoA synthetase 100.0 1.1E-67 2.5E-72 559.4 51.5 507 14-554 42-560 (570)
35 PRK05857 acyl-CoA synthetase; 100.0 1.3E-67 2.8E-72 555.0 50.7 515 5-554 5-532 (540)
36 PLN02479 acetate-CoA ligase 100.0 4E-67 8.8E-72 554.5 54.4 543 7-557 13-562 (567)
37 PRK10524 prpE propionyl-CoA sy 100.0 2.8E-67 6.2E-72 562.6 53.8 518 16-554 55-606 (629)
38 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 4.2E-67 9E-72 550.5 54.0 499 11-548 20-527 (527)
39 PRK06018 putative acyl-CoA syn 100.0 1.3E-66 2.9E-71 548.3 57.8 525 8-554 4-535 (542)
40 PRK08316 acyl-CoA synthetase; 100.0 6.7E-67 1.4E-71 550.1 54.6 512 10-555 7-521 (523)
41 PRK07638 acyl-CoA synthetase; 100.0 2.4E-67 5.1E-72 547.4 50.0 484 14-558 1-486 (487)
42 PRK09274 peptide synthase; Pro 100.0 1E-67 2.2E-72 558.6 47.7 511 11-555 3-550 (552)
43 PRK06087 short chain acyl-CoA 100.0 1.3E-66 2.7E-71 549.7 54.9 515 7-555 16-538 (547)
44 PRK07786 long-chain-fatty-acid 100.0 1.4E-66 3.1E-71 548.0 54.9 510 9-555 12-526 (542)
45 PRK05852 acyl-CoA synthetase; 100.0 4E-67 8.7E-72 551.5 50.5 516 7-553 9-532 (534)
46 PRK08315 AMP-binding domain pr 100.0 2E-66 4.3E-71 550.2 56.1 520 7-556 9-554 (559)
47 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.2E-66 2.5E-71 556.8 53.8 503 26-554 96-627 (652)
48 PRK05620 long-chain-fatty-acid 100.0 1.9E-66 4E-71 550.9 54.9 533 8-557 4-561 (576)
49 PRK03584 acetoacetyl-CoA synth 100.0 1.5E-66 3.3E-71 558.7 54.5 512 15-555 87-627 (655)
50 PRK07514 malonyl-CoA synthase; 100.0 2.8E-66 6.2E-71 542.4 54.7 498 13-554 2-502 (504)
51 PRK07867 acyl-CoA synthetase; 100.0 2.6E-66 5.6E-71 542.9 54.2 490 12-555 3-509 (529)
52 PRK06145 acyl-CoA synthetase; 100.0 2.6E-66 5.6E-71 541.5 53.3 492 14-552 2-496 (497)
53 PRK06164 acyl-CoA synthetase; 100.0 2.8E-66 6E-71 546.5 53.5 520 10-557 6-536 (540)
54 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 5E-66 1.1E-70 543.7 55.2 498 11-548 19-537 (538)
55 PRK08008 caiC putative crotono 100.0 3.1E-66 6.7E-71 543.4 53.1 503 12-548 5-517 (517)
56 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.7E-66 8E-71 543.2 53.6 501 15-549 1-514 (515)
57 PRK10946 entE enterobactin syn 100.0 4.6E-66 1E-70 543.0 53.9 504 11-556 22-535 (536)
58 PTZ00342 acyl-CoA synthetase; 100.0 8.4E-67 1.8E-71 555.3 47.7 519 13-554 60-735 (746)
59 PRK12583 acyl-CoA synthetase; 100.0 2.2E-65 4.7E-70 542.4 57.4 513 12-555 16-554 (558)
60 PRK06060 acyl-CoA synthetase; 100.0 1.6E-66 3.5E-71 562.7 49.5 477 15-551 5-490 (705)
61 PLN02861 long-chain-fatty-acid 100.0 1.3E-66 2.8E-71 556.7 47.6 517 13-555 42-648 (660)
62 PRK07769 long-chain-fatty-acid 100.0 2.7E-66 5.8E-71 554.9 49.1 510 12-555 19-616 (631)
63 PRK09088 acyl-CoA synthetase; 100.0 8.1E-66 1.8E-70 536.3 51.3 480 21-555 2-487 (488)
64 PRK06188 acyl-CoA synthetase; 100.0 2.2E-65 4.7E-70 537.7 54.6 509 11-555 9-519 (524)
65 PLN03052 acetate--CoA ligase; 100.0 1.6E-65 3.4E-70 549.7 53.5 512 14-555 174-723 (728)
66 PRK12492 long-chain-fatty-acid 100.0 1E-64 2.2E-69 536.0 54.5 513 14-550 24-561 (562)
67 PRK08279 long-chain-acyl-CoA s 100.0 4.6E-65 1E-69 542.9 52.4 513 6-557 29-568 (600)
68 PRK08043 bifunctional acyl-[ac 100.0 1.7E-65 3.8E-70 554.8 49.7 499 12-555 202-715 (718)
69 PLN02387 long-chain-fatty-acid 100.0 1.4E-65 3.1E-70 550.7 48.4 520 14-555 58-691 (696)
70 PRK13383 acyl-CoA synthetase; 100.0 6.5E-65 1.4E-69 532.5 51.9 480 12-548 33-515 (516)
71 PRK13388 acyl-CoA synthetase; 100.0 9.1E-65 2E-69 533.0 52.6 488 14-554 3-507 (540)
72 PRK06178 acyl-CoA synthetase; 100.0 4.5E-64 9.8E-69 532.3 57.6 527 11-554 30-566 (567)
73 PRK07059 Long-chain-fatty-acid 100.0 2.2E-64 4.7E-69 533.5 53.8 516 11-550 20-555 (557)
74 PRK06710 long-chain-fatty-acid 100.0 1.6E-64 3.4E-69 535.3 52.1 521 14-557 24-559 (563)
75 TIGR03443 alpha_am_amid L-amin 100.0 4.7E-65 1E-69 590.9 52.3 517 13-549 235-824 (1389)
76 PRK08751 putative long-chain f 100.0 3.1E-64 6.7E-69 533.1 53.7 514 13-550 24-557 (560)
77 PRK08633 2-acyl-glycerophospho 100.0 1.6E-64 3.5E-69 579.3 52.0 518 11-554 612-1144(1146)
78 PRK12467 peptide synthase; Pro 100.0 1.2E-65 2.7E-70 632.4 45.7 492 12-554 3093-3595(3956)
79 PRK12476 putative fatty-acid-- 100.0 7.8E-65 1.7E-69 541.2 45.6 508 12-555 32-608 (612)
80 PRK05851 long-chain-fatty-acid 100.0 6.5E-65 1.4E-69 532.6 43.6 486 16-553 4-522 (525)
81 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.8E-64 8.2E-69 526.1 48.7 490 15-552 1-501 (502)
82 TIGR03205 pimA dicarboxylate-- 100.0 2.4E-63 5.2E-68 523.7 55.1 513 12-548 19-541 (541)
83 PLN02430 long-chain-fatty-acid 100.0 1.6E-64 3.4E-69 539.4 45.4 519 12-555 40-648 (660)
84 PRK10252 entF enterobactin syn 100.0 1.3E-64 2.7E-69 585.6 48.2 495 10-550 454-964 (1296)
85 PRK13390 acyl-CoA synthetase; 100.0 1E-63 2.2E-68 522.0 49.4 486 21-548 4-501 (501)
86 TIGR02262 benz_CoA_lig benzoat 100.0 3.8E-63 8.3E-68 518.6 51.8 496 16-549 6-507 (508)
87 COG1022 FAA1 Long-chain acyl-C 100.0 2.8E-64 6.2E-69 509.4 40.0 506 12-554 14-602 (613)
88 PRK08180 feruloyl-CoA synthase 100.0 1.1E-63 2.4E-68 532.1 45.1 503 10-556 35-599 (614)
89 PRK07787 acyl-CoA synthetase; 100.0 4.2E-63 9.2E-68 512.7 48.1 458 24-550 10-470 (471)
90 PRK07798 acyl-CoA synthetase; 100.0 3.1E-62 6.8E-67 515.9 54.9 505 13-553 2-532 (533)
91 PRK04813 D-alanine--poly(phosp 100.0 1.2E-62 2.6E-67 515.2 49.3 492 14-553 2-503 (503)
92 PRK08974 long-chain-fatty-acid 100.0 7.1E-62 1.5E-66 514.7 54.8 517 13-554 22-556 (560)
93 PTZ00216 acyl-CoA synthetase; 100.0 3.3E-63 7.2E-68 533.9 44.6 512 12-555 67-693 (700)
94 PRK13391 acyl-CoA synthetase; 100.0 6.8E-62 1.5E-66 509.3 53.2 497 20-553 3-509 (511)
95 PRK12406 long-chain-fatty-acid 100.0 1E-61 2.2E-66 507.9 54.1 498 31-556 3-506 (509)
96 PRK12316 peptide synthase; Pro 100.0 2.4E-63 5.1E-68 621.4 49.5 485 13-552 510-1005(5163)
97 PRK09029 O-succinylbenzoic aci 100.0 2.4E-62 5.2E-67 505.5 48.6 453 15-556 3-456 (458)
98 PRK07445 O-succinylbenzoic aci 100.0 7.5E-63 1.6E-67 504.8 43.1 429 39-554 19-448 (452)
99 PRK12316 peptide synthase; Pro 100.0 2.9E-63 6.2E-68 620.7 48.4 490 13-551 2002-2502(5163)
100 KOG1175 Acyl-CoA synthetase [L 100.0 2.5E-62 5.4E-67 488.8 44.0 506 19-554 69-603 (626)
101 PRK12467 peptide synthase; Pro 100.0 9.6E-63 2.1E-67 606.8 50.1 496 9-552 507-1017(3956)
102 PRK08276 long-chain-fatty-acid 100.0 1.1E-61 2.4E-66 507.1 50.7 488 31-555 3-498 (502)
103 PRK07868 acyl-CoA synthetase; 100.0 1.3E-61 2.7E-66 536.3 51.8 493 11-551 444-956 (994)
104 KOG1256 Long-chain acyl-CoA sy 100.0 2.6E-62 5.7E-67 486.6 40.4 522 10-555 71-682 (691)
105 PRK06814 acylglycerophosphoeth 100.0 4.4E-61 9.5E-66 548.4 53.4 499 12-556 629-1135(1140)
106 PRK05691 peptide synthase; Val 100.0 7.9E-62 1.7E-66 604.0 50.7 495 12-550 3718-4225(4334)
107 PRK05691 peptide synthase; Val 100.0 6.7E-62 1.5E-66 604.6 48.8 491 6-550 1123-1625(4334)
108 PLN03051 acyl-activating enzym 100.0 3.6E-61 7.7E-66 500.8 44.9 457 71-556 1-494 (499)
109 PRK12582 acyl-CoA synthetase; 100.0 1.9E-61 4E-66 516.0 41.2 501 11-555 46-609 (624)
110 PRK05850 acyl-CoA synthetase; 100.0 2.7E-60 5.9E-65 504.5 47.3 505 14-555 1-570 (578)
111 PRK09192 acyl-CoA synthetase; 100.0 3.5E-60 7.5E-65 502.9 46.9 504 13-556 20-569 (579)
112 TIGR01923 menE O-succinylbenzo 100.0 3.3E-60 7.1E-65 487.4 43.1 436 41-547 1-436 (436)
113 KOG1180 Acyl-CoA synthetase [L 100.0 2.3E-59 5E-64 444.2 32.7 524 12-554 39-670 (678)
114 PRK07768 long-chain-fatty-acid 100.0 7E-58 1.5E-62 482.9 46.4 495 15-552 3-544 (545)
115 PRK08308 acyl-CoA synthetase; 100.0 1.3E-57 2.7E-62 463.6 45.4 407 32-548 1-408 (414)
116 KOG1179 Very long-chain acyl-C 100.0 9.1E-57 2E-61 428.6 39.5 521 11-562 74-622 (649)
117 PF00501 AMP-binding: AMP-bind 100.0 4.6E-56 9.9E-61 453.9 35.7 399 20-456 1-417 (417)
118 TIGR01733 AA-adenyl-dom amino 100.0 3E-51 6.6E-56 417.3 39.2 394 41-480 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 1.5E-47 3.3E-52 381.9 37.2 321 187-553 32-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 1.9E-45 4.1E-50 406.5 44.7 489 5-555 418-997 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 3.6E-38 7.9E-43 339.1 39.1 411 13-473 226-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 1.5E-38 3.2E-43 314.7 29.6 287 191-543 96-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 8.2E-37 1.8E-41 310.6 28.5 327 188-545 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 1.9E-33 4.1E-38 285.8 37.1 516 14-558 770-1356(1363)
125 KOG1178 Non-ribosomal peptide 100.0 4.2E-32 9.2E-37 285.4 24.8 502 15-555 37-581 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 1.1E-29 2.5E-34 258.0 28.6 324 188-544 84-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 8.5E-29 1.8E-33 237.6 26.2 324 187-543 87-429 (438)
128 TIGR03089 conserved hypothetic 99.9 2.3E-25 5.1E-30 204.1 22.8 218 20-280 2-227 (227)
129 PRK09188 serine/threonine prot 99.9 2.1E-21 4.6E-26 187.8 15.5 121 426-557 208-332 (365)
130 KOG3628 Predicted AMP-binding 99.8 3.2E-19 6.9E-24 183.1 25.1 506 15-560 95-711 (1363)
131 TIGR02304 aden_form_hyp probab 99.8 1.7E-17 3.7E-22 164.7 24.8 256 191-498 100-377 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.3 4.5E-12 9.7E-17 93.5 5.3 70 464-541 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 99.0 6.3E-08 1.4E-12 94.5 18.9 226 189-451 88-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.5 2.4E-06 5.3E-11 88.4 15.2 177 307-519 268-467 (528)
135 PLN02249 indole-3-acetic acid- 98.0 0.00028 6E-09 73.5 17.5 44 428-471 409-456 (597)
136 PLN02620 indole-3-acetic acid- 97.9 0.0031 6.8E-08 65.2 21.7 45 428-472 422-470 (612)
137 PLN02247 indole-3-acetic acid- 97.7 0.0059 1.3E-07 63.3 20.9 134 307-472 294-464 (606)
138 PF14535 AMP-binding_C_2: AMP- 97.6 9E-05 1.9E-09 57.6 4.3 84 457-544 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 95.8 0.094 2E-06 52.1 10.8 93 39-132 109-203 (438)
140 TIGR03335 F390_ftsA coenzyme F 88.4 6.1 0.00013 40.6 12.0 86 38-126 104-191 (445)
141 TIGR02155 PA_CoA_ligase phenyl 87.2 6.5 0.00014 40.1 11.4 90 39-129 94-185 (422)
142 PRK07656 long-chain-fatty-acid 73.5 40 0.00086 35.2 11.8 86 38-127 184-271 (513)
143 PF00501 AMP-binding: AMP-bind 71.3 29 0.00064 35.0 10.0 88 188-284 8-99 (417)
144 TIGR03089 conserved hypothetic 70.5 28 0.00061 31.9 8.6 54 57-112 171-226 (227)
145 PRK06187 long-chain-fatty-acid 68.7 46 0.00099 34.8 11.0 87 38-128 185-272 (521)
146 PRK06334 long chain fatty acid 67.5 98 0.0021 32.7 13.2 99 27-128 181-290 (539)
147 KOG1176 Acyl-CoA synthetase [L 66.3 32 0.00069 36.1 8.8 87 207-294 43-135 (537)
148 PLN02736 long-chain acyl-CoA s 66.2 63 0.0014 35.2 11.7 86 208-294 77-166 (651)
149 KOG1177 Long chain fatty acid 64.4 97 0.0021 31.6 11.0 93 27-122 232-335 (596)
150 PRK08315 AMP-binding domain pr 61.2 82 0.0018 33.3 11.3 84 38-124 217-302 (559)
151 PRK12583 acyl-CoA synthetase; 58.5 94 0.002 32.8 11.2 83 38-123 219-303 (558)
152 PLN02654 acetate-CoA ligase 57.1 88 0.0019 34.2 10.8 95 189-287 103-201 (666)
153 PRK09274 peptide synthase; Pro 57.0 68 0.0015 33.9 9.8 97 189-286 20-121 (552)
154 COG0399 WecE Predicted pyridox 56.6 49 0.0011 32.8 7.7 66 49-118 59-129 (374)
155 TIGR03098 ligase_PEP_1 acyl-Co 55.9 98 0.0021 32.3 10.7 86 38-127 179-265 (515)
156 PLN03102 acyl-activating enzym 55.5 78 0.0017 33.8 9.9 81 209-290 39-123 (579)
157 TIGR03590 PseG pseudaminic aci 54.9 1.5E+02 0.0031 28.2 10.6 91 47-148 18-113 (279)
158 TIGR01217 ac_ac_CoA_syn acetoa 53.5 1.1E+02 0.0024 33.3 10.8 92 190-286 99-194 (652)
159 TIGR01733 AA-adenyl-dom amino 53.3 1.3E+02 0.0029 30.0 10.9 90 38-130 138-230 (408)
160 PRK04319 acetyl-CoA synthetase 52.4 1.3E+02 0.0029 31.9 11.1 86 38-126 223-310 (570)
161 PLN02614 long-chain acyl-CoA s 52.3 1.7E+02 0.0036 32.0 11.9 85 208-293 78-166 (666)
162 TIGR02188 Ac_CoA_lig_AcsA acet 52.1 1.1E+02 0.0024 33.0 10.5 96 188-287 70-169 (625)
163 PRK03584 acetoacetyl-CoA synth 51.9 1.2E+02 0.0027 32.9 10.9 93 189-286 98-194 (655)
164 PRK07529 AMP-binding domain pr 51.8 99 0.0022 33.5 10.1 95 188-285 38-136 (632)
165 PLN03052 acetate--CoA ligase; 51.6 1.2E+02 0.0027 33.5 10.8 98 188-287 188-289 (728)
166 PLN02565 cysteine synthase 51.1 1.8E+02 0.0039 28.3 10.7 81 38-120 41-122 (322)
167 PTZ00237 acetyl-CoA synthetase 51.0 1.2E+02 0.0027 32.9 10.7 94 189-286 75-172 (647)
168 PLN02246 4-coumarate--CoA liga 51.0 1.1E+02 0.0024 32.2 10.1 84 208-292 49-136 (537)
169 PRK13295 cyclohexanecarboxylat 50.9 1E+02 0.0023 32.5 10.0 94 189-286 38-135 (547)
170 PRK06839 acyl-CoA synthetase; 50.3 1.4E+02 0.0031 30.8 10.8 85 208-293 26-115 (496)
171 PRK00174 acetyl-CoA synthetase 50.0 1.3E+02 0.0027 32.7 10.6 95 188-286 80-178 (637)
172 PLN02387 long-chain-fatty-acid 49.9 1.4E+02 0.0031 32.8 11.0 88 207-295 104-195 (696)
173 PRK08316 acyl-CoA synthetase; 49.9 1.1E+02 0.0025 31.8 10.1 85 208-293 35-123 (523)
174 PRK07788 acyl-CoA synthetase; 49.5 88 0.0019 33.1 9.1 83 209-292 74-160 (549)
175 PRK03640 O-succinylbenzoic aci 48.6 1.3E+02 0.0029 30.9 10.2 86 38-127 159-245 (483)
176 PTZ00342 acyl-CoA synthetase; 47.8 2.5E+02 0.0055 31.2 12.4 116 189-315 75-208 (746)
177 TIGR01923 menE O-succinylbenzo 47.5 83 0.0018 31.9 8.3 83 38-126 129-212 (436)
178 PRK06188 acyl-CoA synthetase; 47.4 1.8E+02 0.0038 30.5 11.0 86 38-127 186-271 (524)
179 PF01041 DegT_DnrJ_EryC1: DegT 47.1 67 0.0014 31.9 7.3 65 51-119 52-121 (363)
180 PRK13388 acyl-CoA synthetase; 46.5 1.5E+02 0.0033 31.2 10.3 83 209-292 26-113 (540)
181 PLN03051 acyl-activating enzym 46.4 1.2E+02 0.0027 31.5 9.5 85 38-125 137-222 (499)
182 PRK10696 tRNA 2-thiocytidine b 46.4 2E+02 0.0043 26.9 9.9 79 41-119 4-95 (258)
183 PRK06155 crotonobetaine/carnit 46.3 1E+02 0.0023 32.5 9.1 85 209-294 46-134 (542)
184 TIGR02316 propion_prpE propion 46.2 1.7E+02 0.0038 31.5 10.9 95 188-286 65-163 (628)
185 PLN02860 o-succinylbenzoate-Co 45.7 1.9E+02 0.0042 30.6 11.1 86 38-127 190-276 (563)
186 PLN02861 long-chain-fatty-acid 44.4 1.3E+02 0.0028 32.8 9.6 85 208-293 76-164 (660)
187 cd01445 TST_Repeats Thiosulfat 44.1 62 0.0014 26.9 5.5 43 50-92 81-126 (138)
188 PRK08308 acyl-CoA synthetase; 43.9 2.8E+02 0.006 27.9 11.5 85 38-126 119-205 (414)
189 PRK05857 acyl-CoA synthetase; 43.6 1.3E+02 0.0029 31.7 9.3 80 208-288 40-123 (540)
190 PLN02330 4-coumarate--CoA liga 43.1 1.2E+02 0.0027 31.9 9.1 95 189-291 42-140 (546)
191 PRK06381 threonine synthase; V 43.1 2.4E+02 0.0051 27.4 10.3 113 6-124 7-122 (319)
192 PF02729 OTCace_N: Aspartate/o 42.9 2E+02 0.0043 24.0 12.5 98 44-147 16-125 (142)
193 PRK05677 long-chain-fatty-acid 42.9 1.5E+02 0.0033 31.4 9.8 82 208-290 48-134 (562)
194 TIGR02304 aden_form_hyp probab 42.0 2.6E+02 0.0056 28.6 10.5 84 60-146 139-222 (430)
195 PRK08279 long-chain-acyl-CoA s 42.0 1.8E+02 0.0039 31.2 10.2 83 209-292 62-148 (600)
196 PRK07798 acyl-CoA synthetase; 40.9 2.1E+02 0.0046 29.8 10.5 84 208-293 27-115 (533)
197 PLN02574 4-coumarate--CoA liga 40.7 2.4E+02 0.0051 29.9 10.8 84 209-293 66-154 (560)
198 PRK08276 long-chain-fatty-acid 40.6 1.5E+02 0.0033 30.7 9.2 83 209-292 11-97 (502)
199 PRK08008 caiC putative crotono 40.2 2.1E+02 0.0044 29.9 10.1 82 209-291 37-122 (517)
200 PRK07514 malonyl-CoA synthase; 40.1 1.4E+02 0.003 31.0 8.8 84 208-292 27-114 (504)
201 PRK11761 cysM cysteine synthas 40.0 3E+02 0.0065 26.4 10.3 79 38-119 38-117 (296)
202 PRK06164 acyl-CoA synthetase; 39.9 2.5E+02 0.0054 29.5 10.8 86 38-127 199-285 (540)
203 TIGR02275 DHB_AMP_lig 2,3-dihy 39.6 4E+02 0.0088 27.8 12.3 97 27-127 181-289 (527)
204 TIGR02379 ECA_wecE TDP-4-keto- 39.4 1.1E+02 0.0024 30.6 7.5 57 58-118 65-126 (376)
205 PRK02261 methylaspartate mutas 39.2 2.2E+02 0.0048 23.6 10.6 101 233-340 6-120 (137)
206 PRK05605 long-chain-fatty-acid 39.1 1.3E+02 0.0029 31.9 8.6 83 209-292 57-143 (573)
207 PLN02430 long-chain-fatty-acid 39.0 3.4E+02 0.0074 29.6 11.8 82 208-291 75-161 (660)
208 PRK05850 acyl-CoA synthetase; 39.0 3E+02 0.0065 29.3 11.3 83 208-292 34-123 (578)
209 PLN02550 threonine dehydratase 38.6 4.2E+02 0.0091 28.4 11.6 97 24-125 119-217 (591)
210 PRK08314 long-chain-fatty-acid 38.1 1.4E+02 0.0031 31.4 8.6 84 209-293 35-123 (546)
211 PRK09088 acyl-CoA synthetase; 37.7 2.5E+02 0.0054 29.0 10.2 77 209-286 22-102 (488)
212 PRK11706 TDP-4-oxo-6-deoxy-D-g 37.6 1.2E+02 0.0026 30.2 7.5 56 59-118 66-126 (375)
213 PRK10524 prpE propionyl-CoA sy 37.4 2.7E+02 0.0059 30.0 10.7 95 188-286 66-164 (629)
214 COG2236 Predicted phosphoribos 37.2 56 0.0012 28.9 4.3 48 38-85 5-54 (192)
215 COG1064 AdhP Zn-dependent alco 37.0 1.6E+02 0.0035 28.7 7.7 60 56-119 159-218 (339)
216 COG0318 CaiC Acyl-CoA syntheta 36.4 2.5E+02 0.0055 29.6 10.0 78 209-287 38-119 (534)
217 PLN02479 acetate-CoA ligase 36.4 2.7E+02 0.0059 29.5 10.4 81 209-290 45-129 (567)
218 PF00036 EF-hand_1: EF hand; 36.1 38 0.00083 19.2 2.1 22 533-554 8-29 (29)
219 PLN03013 cysteine synthase 35.8 3.9E+02 0.0084 27.3 10.5 80 39-120 150-230 (429)
220 PRK13383 acyl-CoA synthetase; 35.8 1.8E+02 0.0039 30.4 8.9 84 209-293 60-147 (516)
221 cd02070 corrinoid_protein_B12- 35.7 3.2E+02 0.007 24.3 10.7 87 232-322 84-179 (201)
222 COG1171 IlvA Threonine dehydra 35.5 2.4E+02 0.0053 27.6 8.6 103 23-129 34-138 (347)
223 PF00818 Ice_nucleation: Ice n 35.4 17 0.00037 17.4 0.4 9 336-344 1-9 (16)
224 PF09580 Spore_YhcN_YlaJ: Spor 35.0 1.2E+02 0.0026 26.3 6.2 51 461-519 76-126 (177)
225 KOG0023 Alcohol dehydrogenase, 35.0 2.1E+02 0.0046 27.6 7.8 76 55-133 173-248 (360)
226 TIGR01139 cysK cysteine syntha 34.8 2.7E+02 0.0057 26.7 9.1 68 53-121 45-113 (298)
227 PRK07638 acyl-CoA synthetase; 34.8 2.8E+02 0.0062 28.6 10.1 86 38-127 161-247 (487)
228 PRK08043 bifunctional acyl-[ac 34.6 3.2E+02 0.0068 30.2 10.8 82 38-122 383-466 (718)
229 PLN02556 cysteine synthase/L-3 34.3 2.5E+02 0.0054 28.0 8.9 62 58-119 103-165 (368)
230 TIGR02262 benz_CoA_lig benzoat 34.1 3.6E+02 0.0078 28.0 10.8 84 38-123 179-264 (508)
231 PRK07470 acyl-CoA synthetase; 33.6 5.7E+02 0.012 26.6 12.3 89 38-127 181-270 (528)
232 PRK13391 acyl-CoA synthetase; 33.5 3.1E+02 0.0068 28.5 10.2 96 188-291 10-109 (511)
233 cd01449 TST_Repeat_2 Thiosulfa 33.5 95 0.0021 24.6 5.0 41 50-90 64-104 (118)
234 cd00754 MoaD Ubiquitin domain 33.4 1.1E+02 0.0024 22.1 5.0 45 13-72 25-76 (80)
235 PRK08751 putative long-chain f 33.4 1.8E+02 0.004 30.7 8.5 82 209-291 50-136 (560)
236 PRK06087 short chain acyl-CoA 33.4 2.3E+02 0.0049 29.9 9.2 77 208-285 48-128 (547)
237 TIGR03443 alpha_am_amid L-amin 33.2 2.1E+02 0.0046 34.5 9.8 97 188-285 249-349 (1389)
238 TIGR01136 cysKM cysteine synth 32.9 2.9E+02 0.0063 26.5 9.0 79 39-120 34-113 (299)
239 PRK07059 Long-chain-fatty-acid 32.7 2.1E+02 0.0045 30.3 8.8 83 208-291 47-133 (557)
240 TIGR03208 cyc_hxne_CoA_lg cycl 32.2 3E+02 0.0065 28.9 9.9 79 208-287 52-134 (538)
241 PRK06178 acyl-CoA synthetase; 32.1 2.1E+02 0.0045 30.4 8.7 84 209-293 58-145 (567)
242 PF03744 BioW: 6-carboxyhexano 31.9 72 0.0016 29.2 4.2 26 397-437 174-199 (239)
243 PRK05620 long-chain-fatty-acid 31.1 6.6E+02 0.014 26.6 13.3 88 38-126 199-287 (576)
244 PRK08633 2-acyl-glycerophospho 30.8 5.8E+02 0.013 30.0 12.8 98 27-127 780-888 (1146)
245 PRK13382 acyl-CoA synthetase; 30.7 2.7E+02 0.0058 29.3 9.1 81 209-290 68-152 (537)
246 COG0365 Acs Acyl-coenzyme A sy 30.7 2.8E+02 0.0061 29.2 8.8 93 193-290 27-124 (528)
247 TIGR02370 pyl_corrinoid methyl 30.6 3.9E+02 0.0084 23.8 9.1 85 35-119 47-143 (197)
248 PRK08162 acyl-CoA synthetase; 30.6 2E+02 0.0044 30.2 8.3 83 209-292 43-129 (545)
249 PRK12476 putative fatty-acid-- 30.2 5.3E+02 0.012 27.7 11.5 100 189-291 48-155 (612)
250 PRK11493 sseA 3-mercaptopyruva 30.0 84 0.0018 29.9 4.7 52 39-90 201-257 (281)
251 cd02069 methionine_synthase_B1 30.0 4.2E+02 0.0091 24.0 9.7 90 231-326 89-187 (213)
252 PRK10946 entE enterobactin syn 29.9 6.4E+02 0.014 26.4 11.9 87 38-128 200-289 (536)
253 PF11142 DUF2917: Protein of u 29.5 1E+02 0.0022 21.5 3.8 35 398-447 24-58 (63)
254 COG1022 FAA1 Long-chain acyl-C 29.3 4.7E+02 0.01 28.2 10.3 101 25-129 187-297 (613)
255 PRK12406 long-chain-fatty-acid 28.9 2.4E+02 0.0053 29.3 8.5 84 209-293 11-98 (509)
256 TIGR03588 PseC UDP-4-keto-6-de 28.8 2.7E+02 0.0059 27.7 8.4 65 51-118 56-128 (380)
257 PRK06382 threonine dehydratase 28.8 3.4E+02 0.0074 27.4 9.0 54 71-124 79-132 (406)
258 PRK06702 O-acetylhomoserine am 28.3 2.7E+02 0.0058 28.5 8.1 69 48-119 62-133 (432)
259 PRK07787 acyl-CoA synthetase; 28.3 6.5E+02 0.014 25.8 11.4 84 38-126 146-231 (471)
260 PRK13390 acyl-CoA synthetase; 28.2 4.8E+02 0.01 27.0 10.5 79 208-287 23-105 (501)
261 TIGR02370 pyl_corrinoid methyl 28.1 4.3E+02 0.0093 23.5 10.3 88 233-324 86-183 (197)
262 cd01519 RHOD_HSP67B2 Member of 28.1 1.3E+02 0.0028 23.1 4.8 53 38-90 36-92 (106)
263 PF01037 AsnC_trans_reg: AsnC 28.1 2.2E+02 0.0047 20.0 6.0 48 460-519 10-57 (74)
264 cd06448 L-Ser-dehyd Serine deh 28.0 5.6E+02 0.012 24.8 10.2 90 28-120 15-106 (316)
265 PRK07008 long-chain-fatty-acid 27.8 2.9E+02 0.0063 29.1 8.8 88 38-127 194-283 (539)
266 PRK11658 UDP-4-amino-4-deoxy-L 27.7 2.5E+02 0.0053 28.1 7.8 59 54-116 63-126 (379)
267 PRK05852 acyl-CoA synthetase; 27.5 4.8E+02 0.01 27.3 10.5 87 38-127 194-283 (534)
268 cd02070 corrinoid_protein_B12- 27.5 4.4E+02 0.0096 23.4 9.9 85 35-119 46-141 (201)
269 cd00640 Trp-synth-beta_II Tryp 27.4 4.9E+02 0.011 23.9 10.6 68 55-123 41-108 (244)
270 PRK10252 entF enterobactin syn 27.3 7E+02 0.015 29.8 12.8 98 27-127 596-705 (1296)
271 PLN00011 cysteine synthase 27.3 4.2E+02 0.0091 25.8 9.1 69 51-120 54-124 (323)
272 COG4009 Uncharacterized protei 27.1 2.5E+02 0.0055 20.5 6.4 65 39-114 9-76 (88)
273 cd01561 CBS_like CBS_like: Thi 26.9 5.5E+02 0.012 24.4 10.3 66 55-121 43-109 (291)
274 PRK09162 hypoxanthine-guanine 26.7 1.7E+02 0.0038 25.5 5.7 46 37-83 14-59 (181)
275 PRK07786 long-chain-fatty-acid 26.6 3E+02 0.0064 29.0 8.6 82 209-291 42-127 (542)
276 TIGR03595 Obg_CgtA_exten Obg f 26.4 79 0.0017 22.6 2.8 19 52-70 45-63 (69)
277 TIGR02372 4_coum_CoA_lig 4-cou 26.1 6.8E+02 0.015 25.1 13.3 109 12-126 78-199 (386)
278 PRK12582 acyl-CoA synthetase; 26.1 2.2E+02 0.0048 30.7 7.7 79 207-286 78-165 (624)
279 TIGR01138 cysM cysteine syntha 26.1 4.8E+02 0.01 24.9 9.1 66 53-119 47-113 (290)
280 PRK07769 long-chain-fatty-acid 26.1 7.7E+02 0.017 26.6 11.9 83 208-291 54-142 (631)
281 PRK07476 eutB threonine dehydr 26.0 4.1E+02 0.009 25.8 8.8 53 72-124 74-126 (322)
282 PRK12492 long-chain-fatty-acid 25.9 2.4E+02 0.0051 29.9 7.8 80 208-288 48-132 (562)
283 PF10411 DsbC_N: Disulfide bon 25.8 66 0.0014 21.9 2.3 19 431-449 32-50 (57)
284 PRK10717 cysteine synthase A; 25.8 4.4E+02 0.0094 25.7 9.0 64 56-120 55-119 (330)
285 TIGR00936 ahcY adenosylhomocys 25.7 7.1E+02 0.015 25.2 10.9 66 55-120 23-90 (406)
286 PF09269 DUF1967: Domain of un 25.6 67 0.0014 22.9 2.4 22 49-70 42-63 (69)
287 TIGR02898 spore_YhcN_YlaJ spor 25.6 3.2E+02 0.0069 23.4 6.8 53 462-520 56-108 (158)
288 PRK00779 ornithine carbamoyltr 25.0 6.3E+02 0.014 24.4 11.8 67 63-130 42-117 (304)
289 COG0031 CysK Cysteine synthase 24.5 5.4E+02 0.012 24.7 8.8 58 61-119 59-116 (300)
290 TIGR01734 D-ala-DACP-lig D-ala 24.5 6.9E+02 0.015 25.7 10.9 85 38-125 159-246 (502)
291 cd01019 ZnuA Zinc binding prot 24.5 4.3E+02 0.0093 25.1 8.4 88 42-129 156-246 (286)
292 cd06404 PB1_aPKC PB1 domain is 24.3 1.8E+02 0.0039 21.6 4.3 56 27-82 7-68 (83)
293 TIGR01127 ilvA_1Cterm threonin 24.1 4.6E+02 0.01 26.2 9.0 95 26-125 12-108 (380)
294 PRK06018 putative acyl-CoA syn 23.9 2.7E+02 0.0059 29.3 7.7 83 208-291 38-124 (542)
295 PRK15407 lipopolysaccharide bi 23.8 3.4E+02 0.0075 27.8 8.1 55 60-118 107-166 (438)
296 PLN02723 3-mercaptopyruvate su 23.5 1.5E+02 0.0032 28.9 5.1 54 39-92 238-297 (320)
297 cd01137 PsaA Metal binding pro 22.8 4.7E+02 0.01 24.9 8.3 85 42-126 152-241 (287)
298 TIGR01124 ilvA_2Cterm threonin 22.7 6E+02 0.013 26.6 9.6 94 26-124 29-124 (499)
299 KOG1252 Cystathionine beta-syn 22.7 7.3E+02 0.016 24.3 10.6 61 60-120 99-159 (362)
300 PRK15400 lysine decarboxylase 22.7 2E+02 0.0043 31.5 6.2 60 61-123 232-310 (714)
301 PF09153 DUF1938: Domain of un 22.7 1.8E+02 0.0039 21.5 4.0 32 31-62 16-54 (86)
302 PRK12483 threonine dehydratase 22.6 4.8E+02 0.01 27.5 8.8 60 69-128 89-148 (521)
303 PRK07867 acyl-CoA synthetase; 22.5 4.9E+02 0.011 27.3 9.3 83 209-292 28-115 (529)
304 TIGR01137 cysta_beta cystathio 22.4 4.9E+02 0.011 26.7 9.0 67 52-119 49-116 (454)
305 PF08734 GYD: GYD domain; Int 22.4 3.5E+02 0.0076 20.5 7.8 64 44-107 17-90 (91)
306 PRK08813 threonine dehydratase 22.3 7.7E+02 0.017 24.4 9.8 82 38-124 59-140 (349)
307 PRK06060 acyl-CoA synthetase; 22.0 3.8E+02 0.0083 29.4 8.6 80 209-289 30-113 (705)
308 PF00403 HMA: Heavy-metal-asso 21.9 2.6E+02 0.0057 18.9 5.8 46 462-517 13-58 (62)
309 PF01297 TroA: Periplasmic sol 21.8 2.9E+02 0.0062 25.7 6.6 88 42-129 127-217 (256)
310 PRK08526 threonine dehydratase 21.7 5.7E+02 0.012 25.9 9.0 58 71-128 74-131 (403)
311 PRK08180 feruloyl-CoA synthase 21.5 3.2E+02 0.0069 29.4 7.8 79 207-286 67-154 (614)
312 cd07050 BMC_EutL_repeat2 ethan 21.3 1.8E+02 0.0039 21.4 3.7 39 54-92 4-43 (87)
313 cd02069 methionine_synthase_B1 21.1 6.2E+02 0.013 22.9 9.9 85 36-120 51-148 (213)
314 PRK02261 methylaspartate mutas 21.1 4.8E+02 0.01 21.6 7.6 43 77-119 20-62 (137)
315 PLN02356 phosphateglycerate ki 21.1 6.2E+02 0.013 25.8 9.0 68 50-118 89-157 (423)
316 cd01016 TroA Metal binding pro 21.1 4.9E+02 0.011 24.6 8.0 87 42-128 136-227 (276)
317 TIGR01204 bioW 6-carboxyhexano 20.9 2.5E+02 0.0054 25.6 5.5 9 397-405 167-175 (232)
318 PTZ00216 acyl-CoA synthetase; 20.8 4.8E+02 0.01 28.7 9.0 86 206-293 118-208 (700)
319 PRK06710 long-chain-fatty-acid 20.6 3.4E+02 0.0074 28.7 7.8 81 209-290 49-133 (563)
320 PF01276 OKR_DC_1: Orn/Lys/Arg 20.5 1.8E+02 0.0038 29.5 5.0 59 61-122 103-180 (417)
321 PRK09545 znuA high-affinity zi 20.5 5.3E+02 0.012 24.9 8.2 85 42-129 180-270 (311)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-82 Score=635.49 Aligned_cols=524 Identities=44% Similarity=0.716 Sum_probs=453.3
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHcCCC-CeEEeCC---eeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCc
Q 044926 1 MEQLKPSPANSTPLTPLVFLERAATVYGDS-PSIIYNN---ITYTWSDTHHRCLQLASSLLSIG--ISRGHVVSVVSPNV 74 (569)
Q Consensus 1 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~-~al~~~~---~~~Ty~el~~~v~~~A~~L~~~g--~~~gd~V~i~~~n~ 74 (569)
++++.....+..+.+....+.+.+..++++ ..+++.. +.+||+|+.+++.++|..|.+.| +++||+|++++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs 82 (537)
T KOG1176|consen 3 MEKLWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNT 82 (537)
T ss_pred ccccccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCC
Confidence 355666667777888888888888777777 7777755 89999999999999999999875 89999999999999
Q ss_pred hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccc
Q 044926 75 PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSS 154 (569)
Q Consensus 75 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569)
++++.+++||+..|++..++||.+.+.++.+.++.++++++|++....+.+.+...... ..++++.......
T Consensus 83 ~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~-----~~i~~l~~~~~~~--- 154 (537)
T KOG1176|consen 83 PEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA-----LKIIVLTGDEGVI--- 154 (537)
T ss_pred HHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC-----CceEEEecccCcc---
Confidence 99999999999999999999999999999999999999999999999998877765543 4555555431100
Q ss_pred cCCCCCCCCCcc-cchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCE
Q 044926 155 QSHHPNISDDQF-FSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPV 233 (569)
Q Consensus 155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~ 233 (569)
....... ...+.++...+.+.. ..+...+|++.++|||||||.||||.+||++++.+.......+.++..|+
T Consensus 155 -----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v 227 (537)
T KOG1176|consen 155 -----SISDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDV 227 (537)
T ss_pred -----ccccccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCce
Confidence 0000000 111444444443333 45567799999999999999999999999999998887777788888999
Q ss_pred EEEecCchhhhhhhHHHHHHHhCceEEEe-ccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEE
Q 044926 234 YLWTLPMFHSNGWCFPWAMAAVGGTNICI-RKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLV 312 (569)
Q Consensus 234 ~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~ 312 (569)
.++.+|++|.+|+...+.+.+.|++.++. +.+++..+++.+++|++|++.++|.++..+++.+.....+++ +++.+.
T Consensus 228 ~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~--sl~~v~ 305 (537)
T KOG1176|consen 228 YLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLS--SLRSVL 305 (537)
T ss_pred EEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCC--ccEEEE
Confidence 99999999999999988866665555555 567999999999999999999999999999999866666776 999999
Q ss_pred EeCCCCcHHHHHHHH-hcC-CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcc
Q 044926 313 TAGAPPPAAVLLRTE-SLG-FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVS 390 (569)
Q Consensus 313 ~~g~~l~~~~~~~~~-~~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 390 (569)
+||+++++++.++++ +++ ..+.++||+||+++.++.+.+.++ ....++|.+.++. ...+.+ ++|..
T Consensus 306 ~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~-e~g~~ 373 (537)
T KOG1176|consen 306 SGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLD-ETGVS 373 (537)
T ss_pred ecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeC-CCCCC
Confidence 999999999999998 666 899999999999988888764432 4567899999965 555555 59999
Q ss_pred cCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926 391 AKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY 470 (569)
Q Consensus 391 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~ 470 (569)
++++ +.||||++|+.++.||+++|+.|+..|+++|||+|||+|++|+||+|++.+|++|+||.+|+.|+|.|||++|.
T Consensus 374 l~~~--~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~ 451 (537)
T KOG1176|consen 374 LGPN--QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLL 451 (537)
T ss_pred CCCC--CceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHH
Confidence 9988 88999999999999999999999999997799999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
+||.|.||+|++.+++.+|+.++|+|+.+++.. ..+++|++++++++++|++|..++|+++||+|++|||+|+.|++.
T Consensus 452 ~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~--lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~ 529 (537)
T KOG1176|consen 452 THPDVLEAAVVGIPDEVWGETPAAFVVLKKGST--LTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDI 529 (537)
T ss_pred hCCCccEEEEEcccccccCCcceEEEEecCCCc--CCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHH
Confidence 999999999999999999999999999999766 899999999999999999999999999999999999999999999
Q ss_pred HHhcCCC
Q 044926 551 AENMGSS 557 (569)
Q Consensus 551 ~~~~~~~ 557 (569)
+.++...
T Consensus 530 ~~~~~~~ 536 (537)
T KOG1176|consen 530 AKKLGSK 536 (537)
T ss_pred HHhcccC
Confidence 9987653
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-79 Score=567.49 Aligned_cols=517 Identities=28% Similarity=0.401 Sum_probs=447.1
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYN--NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFA 87 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 87 (569)
+-...|+.++++..+++.||+.|+++. +.++||+||...++++|.+|...|+++||+|++..||+.+|+..++||+++
T Consensus 46 pl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 46 PLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred CcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 346679999999999999999999874 357999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc-----HHHHHHHHhcCCCCCC----------CCCEEEEeCCCcccc
Q 044926 88 AAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS-----RALVREAVSLFPPDLK----------PPPLVLISDDDDAAV 152 (569)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 152 (569)
|.+.+++||++..++++..|++.+++++|+-+.+ .+.+.+...+...... +.+++..+++...
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~-- 203 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPL-- 203 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcC--
Confidence 9999999999999999999999999999997643 3444454444332221 2234444422110
Q ss_pred cccCCCCCCCCCcccchhhHhhhcCCCCcc----cC-CCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC
Q 044926 153 SSQSHHPNISDDQFFSTYESLVAKGDPEFE----WI-RPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS 227 (569)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~ 227 (569)
+ ....+++++........ .. .-..++|++-|.|||||||.|||+.+||.++++++......++
T Consensus 204 ------~------Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g 271 (596)
T KOG1177|consen 204 ------P------GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAG 271 (596)
T ss_pred ------C------CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhC
Confidence 0 13556666655443211 11 1245689999999999999999999999999999999999999
Q ss_pred CCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCc
Q 044926 228 VPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKL 305 (569)
Q Consensus 228 ~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~ 305 (569)
++..+++++..|++|.+|... .+.++..|++++++. .+++.+.++.|+++++|.++++|+++..+++.++....+++
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s- 350 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLS- 350 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchh-
Confidence 999999999999999999765 677788899988864 59999999999999999999999999999999888877777
Q ss_pred CCCceEEEeCCCCcHHHHHHHH-hcCCe-eeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEe
Q 044926 306 AKPVHLVTAGAPPPAAVLLRTE-SLGFK-VSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVL 383 (569)
Q Consensus 306 ~~l~~~~~~g~~l~~~~~~~~~-~~~~~-i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 383 (569)
++|..++||+++++++.+.+. ..+.. +...||+||+++..+....+ +.......++|...+.. +..|+
T Consensus 351 -~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~--------D~~~~~~ksVG~~m~h~-Ea~iv 420 (596)
T KOG1177|consen 351 -SLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLG--------DPPEERIKSVGHLMDHY-EAAIV 420 (596)
T ss_pred -hhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCC--------CCHHHHHhhhhhccccc-ccccc
Confidence 999999999999999999987 55543 77799999999887765433 33444556788877777 99999
Q ss_pred CCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHH
Q 044926 384 DPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSV 463 (569)
Q Consensus 384 d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~ 463 (569)
| +.|..++.+ ..||||++|.+.|.|||++++.+......|.||+|||+|.++++|.+++.||++|+|+.+|++|+|.
T Consensus 421 ~-~~g~~v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ 497 (596)
T KOG1177|consen 421 D-KDGSEVPLG--TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPT 497 (596)
T ss_pred c-CCCCccccC--CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChH
Confidence 9 589999998 6799999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCccc
Q 044926 464 EVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQ 543 (569)
Q Consensus 464 ~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~ 543 (569)
+||+.|.+||.|.++.|++++++..|+.++++|.+.++.+-....++|+.+|+.++.++++|+.|++++++|+|.+|||+
T Consensus 498 ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIq 577 (596)
T KOG1177|consen 498 ELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQ 577 (596)
T ss_pred HHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccch
Confidence 99999999999999999999999999999999999988764468899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 044926 544 KFVLREIAENM 554 (569)
Q Consensus 544 r~~l~~~~~~~ 554 (569)
|.+++++++..
T Consensus 578 KFeir~~~k~~ 588 (596)
T KOG1177|consen 578 KFEIREMSKGH 588 (596)
T ss_pred hHHHHHHHHhh
Confidence 99999999854
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.1e-77 Score=619.22 Aligned_cols=515 Identities=35% Similarity=0.513 Sum_probs=441.2
Q ss_pred CCCCCCCCchHHHHHHHHHHcCCCCeEEeCCee--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 7 SPANSTPLTPLVFLERAATVYGDSPSIIYNNIT--YTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~--~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
......++++.++|.+++..+|+++|+++.++. +||+||.++++++|..|.+.|+++||+|+|+++|++++++++|||
T Consensus 4 ~~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~ 83 (534)
T COG0318 4 LMRMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAA 83 (534)
T ss_pred cccccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 345567899999999999999999999998877 999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCC
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDD 164 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (569)
+++|++++|++|.+..+++.++++.++++.++++.+..+........... ...+..........
T Consensus 84 ~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------------- 147 (534)
T COG0318 84 LRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPV---VLVVLLVGDADDRL------------- 147 (534)
T ss_pred HhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCc---ceEEEecccccccc-------------
Confidence 99999999999999999999999999999999998855555554433210 11122211111100
Q ss_pred cccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC--CCCCCEEEEecCchh
Q 044926 165 QFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS--VPTQPVYLWTLPMFH 242 (569)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~--~~~~d~~~~~~pl~~ 242 (569)
...+++...............+++|+++++|||||||.||||++||++++.+.......++ ++..|++++.+|++|
T Consensus 148 --~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H 225 (534)
T COG0318 148 --PITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFH 225 (534)
T ss_pred --cccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHH
Confidence 0234555333322222222367889999999999999999999999999999888888888 899999999999999
Q ss_pred hhhhhHHHHH-HHhCceEEEec--cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCc
Q 044926 243 SNGWCFPWAM-AAVGGTNICIR--KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPP 319 (569)
Q Consensus 243 ~~g~~~~~~~-~~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~ 319 (569)
.+|+...+.+ ++.|++.++.+ .+++..++..+.++++|++.++|+++..+++.......+... ++|.+++||++++
T Consensus 226 ~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~-~lr~~~~gg~~~~ 304 (534)
T COG0318 226 IFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSS-SLRLVLSGGAPLP 304 (534)
T ss_pred HHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCcccccc-ceEEEEecCCcCC
Confidence 9999987666 67777777776 599999999999999999999999999999988776665552 3999999999999
Q ss_pred HHHHHHHH-hcC-CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCc
Q 044926 320 AAVLLRTE-SLG-FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGST 397 (569)
Q Consensus 320 ~~~~~~~~-~~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~ 397 (569)
++++++++ +++ ..+++.||+||+++.++...... . ......+|.|.+++ +++|+|++++...+ | +
T Consensus 305 ~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~ 371 (534)
T COG0318 305 PELLERFEERFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--E 371 (534)
T ss_pred HHHHHHHHHHhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--C
Confidence 99999998 666 57999999999987777654322 0 23345568999998 99999997775555 5 7
Q ss_pred eeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcce
Q 044926 398 LGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNE 477 (569)
Q Consensus 398 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~ 477 (569)
+|||+++||+++.|||++|+.+...|.++|||+|||+|++|+||++++.||.+|+|+.+|++|+|.+||+++.+||.|.+
T Consensus 372 vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~ 451 (534)
T COG0318 372 VGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAE 451 (534)
T ss_pred ceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcce
Confidence 99999999999999999999999888856999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 478 AAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 478 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
++|++.+++.+|+.++++|+..++.....+.++|.++++++++.+++|+.++++++||+|++||++|+.|++.+..
T Consensus 452 aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 452 AAVVGVPDERWGERVVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred EEEEeCCCCccCceEEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 9999999999999999999998763222588999999999999999999999999999999999999999999887
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.1e-75 Score=582.64 Aligned_cols=495 Identities=27% Similarity=0.357 Sum_probs=416.5
Q ss_pred HHHHHHHHH-cCCCCeEEeCC-----eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 18 VFLERAATV-YGDSPSIIYNN-----ITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 18 ~~l~~~a~~-~p~~~al~~~~-----~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
+.++++... .+|+.|+++.+ +.+||+||.+.++++|+.|++ .|+ +||+|++++|+.++.++++|||+++|++
T Consensus 13 n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI 91 (528)
T COG0365 13 NALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAI 91 (528)
T ss_pred hhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 356777663 46899999864 679999999999999999997 578 9999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchh
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTY 170 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (569)
.+|+.+.++++.+...+++++++++|+.+.....................+++..... ..|
T Consensus 92 ~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-------------------~~~ 152 (528)
T COG0365 92 PAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-------------------LWY 152 (528)
T ss_pred EeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-------------------ccH
Confidence 9999999999999999999999999998765443221110000000011123222221 456
Q ss_pred hHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhh-ccCCCCCCCEEEEecCchhhhhhhH-
Q 044926 171 ESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTL-SDWSVPTQPVYLWTLPMFHSNGWCF- 248 (569)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~-~~~~~~~~d~~~~~~pl~~~~g~~~- 248 (569)
.+..+......+... .+.+|+++++|||||||+||||+++|..++....... ..+.+.++|++++..++.|++|..+
T Consensus 153 ~~~~~~~~~~~~~~~-~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~ 231 (528)
T COG0365 153 DEAVEKASEKFEFEP-LPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYS 231 (528)
T ss_pred HHHhhccCCCCCccc-cCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHH
Confidence 666555444443332 7788999999999999999999999998776665544 4677889999999999999999988
Q ss_pred HHHHHHhCceEEEecc--C-CHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHH
Q 044926 249 PWAMAAVGGTNICIRK--F-DASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLR 325 (569)
Q Consensus 249 ~~~~~~~g~~~~~~~~--~-~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~ 325 (569)
.+++++.|++.++.+. + ++..+++.++++++|.+++.|+.+++|++.....+.+++ +||.+.+.||+++++.+++
T Consensus 232 v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dls--sLr~~~SaGEPLnpe~~~w 309 (528)
T COG0365 232 VFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLS--SLRVLGSAGEPLNPEAFEW 309 (528)
T ss_pred HHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccch--hheeeeccCCCCCHHHHHH
Confidence 7888999999988853 3 499999999999999999999999999998763444455 9999999999999999999
Q ss_pred HH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEe
Q 044926 326 TE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLR 404 (569)
Q Consensus 326 ~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 404 (569)
+. .+|++|.+.||+||++++...... ...+.+.|.|.||. ++.|+|++ |++++.+ + |+|+++
T Consensus 310 ~~~~~g~~i~d~~gqTEtg~~~~~~~~------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~ 372 (528)
T COG0365 310 FYSALGVWILDIYGQTETGMGFIAGRP------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVR 372 (528)
T ss_pred HHHHhCCCEeccccccccCccccCCCC------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEe
Confidence 98 569999999999999955554321 22344559999999 99999997 9999988 7 999999
Q ss_pred cC--cccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEe
Q 044926 405 GG--CIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVA 482 (569)
Q Consensus 405 ~~--~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 482 (569)
.+ .++++||++++.+.+.+-+. ||.|||.+++|+||++|+.||.||+||++|+++.+.|||++|.+||.|.||+|++
T Consensus 373 ~~~p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg 451 (528)
T COG0365 373 LPWPGMALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVG 451 (528)
T ss_pred CCCchhhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEe
Confidence 87 89999999999988888734 9999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 483 RPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 483 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
.+++..|+.+++||+++++.......++|++++++.+.++..|+.|.++++||+|.||||.|+.||+.+.+
T Consensus 452 ~pd~~kg~~v~afVvL~~g~~~~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 452 VPDPGKGQIVLAFVVLAAGVEPNELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred ccCCCCCcEEEEEEEecCCCChHHHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 99999999999999999986533456778888888888899999999999999999999999999999985
No 5
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.2e-74 Score=523.30 Aligned_cols=507 Identities=26% Similarity=0.379 Sum_probs=448.7
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
=|...|+.++|.++|.++||++|+++.++.+||+||+++++++|.+|++.|+++||+|.+..+|..+|++++||++++|+
T Consensus 24 yW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 24 YWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEcccc-----HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCC
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHS-----RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDD 164 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (569)
.+|.--|+....++.+....++++.+|++... .+...+....... ++.+++.++.+..
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~t---lr~v~v~ge~~~~-------------- 166 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPT---LRHVIVAGEAEHP-------------- 166 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCc---ceEEEEccCCCCc--------------
Confidence 99999999999999999999999999998643 3344444443332 4566666443321
Q ss_pred cccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhh
Q 044926 165 QFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSN 244 (569)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~ 244 (569)
......+........+..+.+++++++...+.||||.||.+..||.....+...-.+..+++..+++++.+|..|.+
T Consensus 167 ---~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNf 243 (542)
T COG1021 167 ---SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNF 243 (542)
T ss_pred ---chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCC
Confidence 12222333333333444557788999999999999999999999999988888888888999999999999999999
Q ss_pred hhhH--HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHH
Q 044926 245 GWCF--PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAV 322 (569)
Q Consensus 245 g~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~ 322 (569)
-+.. .++.++.||++|+.++.+++..+.+|+++++|+...+|.....|++..+....+++ |||.+-.||..+++..
T Consensus 244 plssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~Ls--SLrllQVGGarl~~~~ 321 (542)
T COG1021 244 PLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLS--SLRLLQVGGARLSATL 321 (542)
T ss_pred CCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCch--heeEEeecCcccCHHH
Confidence 8876 78889999999999999999999999999999999999999999999988888887 9999999999999999
Q ss_pred HHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEE
Q 044926 323 LLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 323 ~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 401 (569)
.+++. .+||.+.+.+||.|.-...+ .. ++..+......|.|+.+..+++|+|. +|+++++| |+|+|
T Consensus 322 Arrv~~~lgC~LQQVFGMAEGLvnyT--RL--------DDp~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~L 388 (542)
T COG1021 322 ARRVPAVLGCQLQQVFGMAEGLVNYT--RL--------DDPPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGEL 388 (542)
T ss_pred HhhchhhhCchHHHHhhhhhhhhccc--cc--------CCchHheeecCCCcCCCcceeEEecC-CCCCCCCC--Cccee
Confidence 99998 67999999999999532222 21 13345566789999999999999997 89999998 99999
Q ss_pred EEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
.++||...+||++.|+.+...|+.+|+|+|||++++++||++.+.||.+|+|+.+|++|-.+|||+.|..||.|.++++|
T Consensus 389 ltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlV 468 (542)
T COG1021 389 LTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALV 468 (542)
T ss_pred eecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc-CCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR-LPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
..+++..|++.++||+.++.. ....++++++++. +..|++|+.|.+++++|.|+-|||++++|++.+...
T Consensus 469 ampDelLGEksCAfiv~~~~~---~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 469 AMPDELLGEKSCAFIVVKEPP---LRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred cCchhhcCcceeEEEEecCCC---CCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 999999999999999998654 5778999999775 789999999999999999999999999999987654
No 6
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=6.4e-72 Score=590.63 Aligned_cols=527 Identities=25% Similarity=0.327 Sum_probs=423.2
Q ss_pred CCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q 044926 8 PANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFA 87 (569)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 87 (569)
+++..+.|+.++|++++..+|+++|+++.++.+||+||.++++++|.+|.+.|+++||+|+|+++|+++++++++||+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~ 80 (563)
T PLN02860 1 MANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACA 80 (563)
T ss_pred CcchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhc
Confidence 45678999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHh-cCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcc
Q 044926 88 AAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVS-LFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQF 166 (569)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (569)
|++++|+++.++.+++.++++++++++++++.+.......... ... ....++...+..... . .....
T Consensus 81 Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~--------~-~~~~~ 148 (563)
T PLN02860 81 GGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLP---SLMWQVFLESPSSSV--------F-IFLNS 148 (563)
T ss_pred cEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCC---ceeEEEEecCccccc--------c-cchhh
Confidence 9999999999999999999999999999998765333322211 111 012233332211000 0 00000
Q ss_pred cchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhh
Q 044926 167 FSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGW 246 (569)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~ 246 (569)
....+++...............++++++++|||||||.||+|.++|+++..++......+++.++|+++...|++|..++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 228 (563)
T PLN02860 149 FLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 228 (563)
T ss_pred ccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccH
Confidence 01111111110000111112456899999999999999999999999998877776677889999999999999999999
Q ss_pred hHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHH
Q 044926 247 CFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRT 326 (569)
Q Consensus 247 ~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~ 326 (569)
...+.+++.|+++++.+++++..+++.|+++++|++.++|+++..|.+..........+.++|.+++||+++++.+.+.+
T Consensus 229 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~ 308 (563)
T PLN02860 229 SSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDA 308 (563)
T ss_pred HHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHH
Confidence 88888899999999998999999999999999999999999999998765332222233499999999999999999998
Q ss_pred Hh-c-CCeeeecccccccccceeecccccc-cccCc-----------HHHHhhhhcccCcccccceeeEEeCCCCCcccC
Q 044926 327 ES-L-GFKVSHGYGLTETGGIVVSCAWKRN-WNLLP-----------AAEKAKLKARQGVKTTALTEVDVLDPKSGVSAK 392 (569)
Q Consensus 327 ~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 392 (569)
++ + ++++++.||+||+++.+........ ..... .........++|.|.+++ +++|++++
T Consensus 309 ~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------ 381 (563)
T PLN02860 309 KKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------ 381 (563)
T ss_pred HHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------
Confidence 84 4 7899999999999765543221110 00000 000011123679999998 99999875
Q ss_pred CCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcC
Q 044926 393 RDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSN 472 (569)
Q Consensus 393 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~ 472 (569)
.+ +.|||+++|+.++.||+++++.+...+..+|||+|||+|++++||++++.||.+|+||.+|++|+|.+||++|.++
T Consensus 382 ~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 459 (563)
T PLN02860 382 SS--RVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQH 459 (563)
T ss_pred CC--ceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhC
Confidence 23 7899999999999999999999988888799999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEecCCCCCCceeEEEEEecCCCC------------CCCCHHHHHHHHhc-cCCCCccccEEEEe-cccCCCC
Q 044926 473 PAVNEAAVVARPDEFWGETPCAFVSLKEGSK------------SKPTEKEMIEYCRG-RLPHYMVPKTVVFM-DELPKTS 538 (569)
Q Consensus 473 ~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~------------~~~~~~~l~~~l~~-~l~~~~~p~~~~~~-~~iP~t~ 538 (569)
|+|.+++|++.+++..++.++++|++.++.. .....+++++++++ +|+.|++|..++++ ++||+|+
T Consensus 460 p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~ 539 (563)
T PLN02860 460 PGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTT 539 (563)
T ss_pred CCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCc
Confidence 9999999999999888899999999876521 12456789999987 59999999988765 6799999
Q ss_pred CCcccHHHHHHHHHhcC
Q 044926 539 TGKIQKFVLREIAENMG 555 (569)
Q Consensus 539 ~GKi~r~~l~~~~~~~~ 555 (569)
+||++|++|++++.+..
T Consensus 540 ~GKi~r~~L~~~~~~~~ 556 (563)
T PLN02860 540 TGKIRRDEVRREVLSHL 556 (563)
T ss_pred ccchhHHHHHHHHHHHH
Confidence 99999999999886654
No 7
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-71 Score=588.40 Aligned_cols=499 Identities=26% Similarity=0.348 Sum_probs=422.6
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
-|+.++|+++++.+||++|+++.++.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++.++.+++.+++++++++++|++.+....+........ ....+........ ........++++
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 193 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG----RLRAWGGNPDDDE-----------PSGSTDETLDDL 193 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc----cceEEEEecCccc-----------cCCcCcccHHHH
Confidence 9999999999999999999999999877665544322111 1111211111100 000113456666
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMA 253 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~ 253 (569)
+....... .+...+++++++|||||||.||+|.++|+++..........+++..+|++++..|++|.+|+...+.++
T Consensus 194 ~~~~~~~~---~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l 270 (549)
T PRK07788 194 IAGSSTAP---LPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAM 270 (549)
T ss_pred hcCCCCCC---CCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHH
Confidence 55433221 123456889999999999999999999999998878777788889999999999999999998777888
Q ss_pred HhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCe
Q 044926 254 AVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFK 332 (569)
Q Consensus 254 ~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~ 332 (569)
..|+++++...+++..+++.++++++|++.++|+++..+++..........+.++|.+++||+++++++.+++. .++..
T Consensus 271 ~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 350 (549)
T PRK07788 271 ALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPV 350 (549)
T ss_pred HhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCcc
Confidence 89999988888999999999999999999999999999998765422222234999999999999999999988 57889
Q ss_pred eeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccc
Q 044926 333 VSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGY 412 (569)
Q Consensus 333 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 412 (569)
+++.||+||++..+..+. ........++|.|.++. +++|+|+ ++.+++.| +.|||+++|+.++.||
T Consensus 351 l~~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY 416 (549)
T PRK07788 351 LYNLYGSTEVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEGY 416 (549)
T ss_pred ceeccCcchhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCccccc
Confidence 999999999876544321 11122345789999998 9999997 67778776 8999999999999999
Q ss_pred cCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCcee
Q 044926 413 LKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETP 492 (569)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~ 492 (569)
++++.. ... +|||+|||+|++++||++++.||.+|+||++|++|+|.+||++|.++|+|.+++|++.+++..|+.+
T Consensus 417 ~~~~~~---~~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~ 492 (549)
T PRK07788 417 TDGRDK---QII-DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRL 492 (549)
T ss_pred cCCCcc---ccc-CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEE
Confidence 988765 222 7899999999999999999999999999999999999999999999999999999999999889999
Q ss_pred EEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 493 CAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 493 ~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
+++|+..++.. .+.++++++++++|+.+++|..++++++||+|++||++|++|+++
T Consensus 493 ~a~vv~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 493 RAFVVKAPGAA--LDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEEeCCCCC--CCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999887654 678999999999999999999999999999999999999999763
No 8
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.9e-71 Score=585.30 Aligned_cols=535 Identities=50% Similarity=0.899 Sum_probs=428.6
Q ss_pred CCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q 044926 8 PANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFA 87 (569)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 87 (569)
.+..+|.|+.++|.++++.+|+++|+.+.+.++||+||.++++++|..|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 8 EANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred ccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCC--CCCCEEEEeCCCcccccccCCCCCCCCCc
Q 044926 88 AAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDL--KPPPLVLISDDDDAAVSSQSHHPNISDDQ 165 (569)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (569)
|++++|++|.++.+++.++++.++++++|++++..+.+.+......... ....++.++...... .. ..
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~ 157 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK-------RP---SS 157 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc-------CC---cc
Confidence 9999999999999999999999999999999887766655543322110 012344443221100 00 00
Q ss_pred ccchhhHhhhcCCCCcc----cCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCch
Q 044926 166 FFSTYESLVAKGDPEFE----WIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMF 241 (569)
Q Consensus 166 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~ 241 (569)
....+.+++........ ......++++++|+|||||||.||+|.++|+++..........+.+...+++++.+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 237 (579)
T PLN03102 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMF 237 (579)
T ss_pred cccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChh
Confidence 01234444433322111 01123567999999999999999999999999765554444445667778999999999
Q ss_pred hhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHH
Q 044926 242 HSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAA 321 (569)
Q Consensus 242 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~ 321 (569)
|..++...+.+++.|+++++.+.+++..+++.|+++++|++.++|+++..|.+.......... +++.+++||+++++.
T Consensus 238 h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~~~~~~~gg~~~~~~ 315 (579)
T PLN03102 238 HCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRS--GPVHVLTGGSPPPAA 315 (579)
T ss_pred hhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcc--cceEEEECCCCCCHH
Confidence 999988877888899999998888999999999999999999999999999987543332333 678899999999999
Q ss_pred HHHHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEE
Q 044926 322 VLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 322 ~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 401 (569)
+.++++++++++++.||+||+++.+..+.....|...+...........|.+..+...+.+.|.+.+..++.++++.|||
T Consensus 316 ~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~GEl 395 (579)
T PLN03102 316 LVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTMGEI 395 (579)
T ss_pred HHHHHHHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCceEE
Confidence 99998888999999999999987665443322222221111111112234444444467788877777776544468999
Q ss_pred EEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
+++|+.++.||+++++.+...|. +|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||.+|.++|.|.+++|+
T Consensus 396 ~v~g~~~~~GY~~~~~~t~~~f~-~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv 474 (579)
T PLN03102 396 VIKGSSIMKGYLKNPKATSEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVV 474 (579)
T ss_pred EEECcchhhhhcCChhhhHhhhc-cCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEE
Confidence 99999999999999999988887 89999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCC--------CCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSK--------PTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
+.+++..++.++++|+..++.... ....+++++++++|+.|++|..++++++||+|++||++|++|++++.+
T Consensus 475 ~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 475 AMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred eccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 999998888999999887653310 135789999999999999999999999999999999999999999877
Q ss_pred cC
Q 044926 554 MG 555 (569)
Q Consensus 554 ~~ 555 (569)
+.
T Consensus 555 ~~ 556 (579)
T PLN03102 555 LV 556 (579)
T ss_pred hh
Confidence 54
No 9
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-71 Score=589.92 Aligned_cols=523 Identities=19% Similarity=0.243 Sum_probs=409.1
Q ss_pred chHHHHHHHHHH--cCCCCeEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q 044926 15 TPLVFLERAATV--YGDSPSIIYN------NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPF 86 (569)
Q Consensus 15 tl~~~l~~~a~~--~p~~~al~~~------~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 86 (569)
+..++|++++.. +|+++|+++. .+++||+||.++++++|..|++.|+++||+|+++++|++++++++|||++
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~ 139 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCAR 139 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 346788888764 7999999873 36899999999999999999999999999999999999999999999999
Q ss_pred ccceEeeccCCCCHHHHHHHHhhcCCeEEEEccc---------cHHHHHHHHhcCCCCCCCCCEEEEeCCCcc-cccccC
Q 044926 87 AAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFH---------SRALVREAVSLFPPDLKPPPLVLISDDDDA-AVSSQS 156 (569)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 156 (569)
+|++++|+++.++.+++.+++++++++++|+++. ..+.+.++...... ....++++...... ......
T Consensus 140 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~~~~~~~~~~~~~ 217 (647)
T PTZ00237 140 IGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTF--KPSNVITLFRNDITSESDLKK 217 (647)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccC--CCCEEEEEEcCCccccccccc
Confidence 9999999999999999999999999999999752 22333333321111 12344444221100 000000
Q ss_pred CCCCCCCCcccchhhHhhhcCC----CCcccCCCCCCCCceEEEecCCCCCCCceEEEchHH-HHHHHhhhhccCCCCCC
Q 044926 157 HHPNISDDQFFSTYESLVAKGD----PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRG-IFIVAVNTLSDWSVPTQ 231 (569)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~-l~~~~~~~~~~~~~~~~ 231 (569)
. ...........|++++.... ..........++|+++|+|||||||.||||+++|.+ +..........+....+
T Consensus 218 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~ 296 (647)
T PTZ00237 218 I-ETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIP 296 (647)
T ss_pred c-cccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCC
Confidence 0 00000001234555544211 111112235678999999999999999999999998 44433333444567788
Q ss_pred CEEEEecCchhhhhhhHHHHHHHhCceEEEecc--CC----HHHHHHHHHHhCcceeechhHHHHHHHcCCCCC---CCC
Q 044926 232 PVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK--FD----ASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPD---KKP 302 (569)
Q Consensus 232 d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~--~~----~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~---~~~ 302 (569)
|++++..|+.|+.+....+.+++.|+++++.+. +. +..+++.++++++|++.++|+++..|++..... ...
T Consensus 297 d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~ 376 (647)
T PTZ00237 297 TVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSK 376 (647)
T ss_pred cEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccc
Confidence 999999999998776677888999999988753 22 688999999999999999999999998753221 122
Q ss_pred CCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeE
Q 044926 303 LKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVD 381 (569)
Q Consensus 303 ~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 381 (569)
..++++|.++++|+++++++.++++ .+++++++.||+||+++.+..... .......++|.|.++. +++
T Consensus 377 ~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~----------~~~~~~~s~G~p~~g~-~~~ 445 (647)
T PTZ00237 377 YDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYG----------HINIPYNATGVPSIFI-KPS 445 (647)
T ss_pred cCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCC----------CCCCCCCCCccCcCCc-eEE
Confidence 2344999999999999999999988 579999999999999865443211 0111235789999998 999
Q ss_pred EeCCCCCcccCCCCCceeEEEEecC---cccccccCCccccccccCC-CCeeeecceEEEecCCcEEEeccCCCeEEeCc
Q 044926 382 VLDPKSGVSAKRDGSTLGEIVLRGG---CIMLGYLKDPIGTRKCMTD-DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGG 457 (569)
Q Consensus 382 i~d~~~~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G 457 (569)
|+|+ +|.+++.| +.|||++++| +++.|||++++.+...|.. +|||+|||+|++++||++++.||+||+||++|
T Consensus 446 i~d~-~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G 522 (647)
T PTZ00237 446 ILSE-DGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISG 522 (647)
T ss_pred EECC-CCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECC
Confidence 9997 78888877 8999999986 7899999999888776653 68999999999999999999999999999999
Q ss_pred eeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCC-CCCC----HHHHHHHHhccCCCCccccEEEEec
Q 044926 458 ENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSK-SKPT----EKEMIEYCRGRLPHYMVPKTVVFMD 532 (569)
Q Consensus 458 ~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~----~~~l~~~l~~~l~~~~~p~~~~~~~ 532 (569)
++|+|.+||++|.+||.|.+++|++.+++..|+.++++|++.++.. ...+ .++|+++++++|+++++|+.|++++
T Consensus 523 ~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~ 602 (647)
T PTZ00237 523 NKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVN 602 (647)
T ss_pred EEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcC
Confidence 9999999999999999999999999999988999999999875421 1123 2567888899999999999999999
Q ss_pred ccCCCCCCcccHHHHHHHHHhc
Q 044926 533 ELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 533 ~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+||+|++||++|+.|++++.+.
T Consensus 603 ~lP~T~sGKi~R~~Lr~~~~~~ 624 (647)
T PTZ00237 603 QLPKTKTGKIPRQIISKFLNDS 624 (647)
T ss_pred CCCCCCCccEeHHHHHHHHcCC
Confidence 9999999999999999997543
No 10
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4e-70 Score=584.33 Aligned_cols=522 Identities=22% Similarity=0.278 Sum_probs=412.2
Q ss_pred Cch-HHHHHHHHH-HcCCCCeEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q 044926 14 LTP-LVFLERAAT-VYGDSPSIIYN------NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVP 85 (569)
Q Consensus 14 ~tl-~~~l~~~a~-~~p~~~al~~~------~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 85 (569)
+++ .++|++++. .+|+++|+++. .+.+||+||.++++++|..|++.|+++||+|+++++|++++++++|||+
T Consensus 87 ~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~ 166 (666)
T PLN02654 87 TNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACA 166 (666)
T ss_pred eeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 444 678887776 48999999874 2689999999999999999999999999999999999999999999999
Q ss_pred hccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHH---------HHHHHHhcCCC-CCCCCCEEEEeCCCccccccc
Q 044926 86 FAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA---------LVREAVSLFPP-DLKPPPLVLISDDDDAAVSSQ 155 (569)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (569)
++|++++|+++.++.+++.+++++++++++|+++.... .+......... ......++....... ..
T Consensus 167 ~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 242 (666)
T PLN02654 167 RIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLA--MK-- 242 (666)
T ss_pred HcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccc--cc--
Confidence 99999999999999999999999999999999876421 22222221110 000111222111100 00
Q ss_pred CCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHH-HhhhhccCCCCCCCEE
Q 044926 156 SHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIV-AVNTLSDWSVPTQPVY 234 (569)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~-~~~~~~~~~~~~~d~~ 234 (569)
......... ....++++....... ........+|+++|+|||||||.||||+++|.+++.. .......++++++|++
T Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~ 320 (666)
T PLN02654 243 REDTKWQEG-RDVWWQDVVPNYPTK-CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVY 320 (666)
T ss_pred ccccccccC-CcccHHHHhhcCCCC-CCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEE
Confidence 000000000 012244444322111 1112246789999999999999999999999997643 3445566789999999
Q ss_pred EEecCchhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCc
Q 044926 235 LWTLPMFHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPV 309 (569)
Q Consensus 235 ~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~ 309 (569)
++..|+.|..+..+ .+.+++.|+++++.+. +++..+++.|+++++|++.++|+++..|.+..........++++|
T Consensus 321 ~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr 400 (666)
T PLN02654 321 WCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLR 400 (666)
T ss_pred EEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhhee
Confidence 99999999998765 5677899999998853 579999999999999999999999999998754323333345999
Q ss_pred eEEEeCCCCcHHHHHHHH-hcC---CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCC
Q 044926 310 HLVTAGAPPPAAVLLRTE-SLG---FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDP 385 (569)
Q Consensus 310 ~~~~~g~~l~~~~~~~~~-~~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~ 385 (569)
.++++|+++++++.+++. .+| +++.+.||+||+++........ .......++|.|.+++ +++|+|+
T Consensus 401 ~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~---------~~~~~~gs~G~p~~g~-~v~i~d~ 470 (666)
T PLN02654 401 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---------AWPQKPGSATFPFFGV-QPVIVDE 470 (666)
T ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCC---------CCCCCCCccCCCCCCc-eEEEECC
Confidence 999999999999999887 556 7899999999998766532210 0112345789999999 9999997
Q ss_pred CCCcccCCCCCceeEEEEec--CcccccccCCccccccccC--CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeee
Q 044926 386 KSGVSAKRDGSTLGEIVLRG--GCIMLGYLKDPIGTRKCMT--DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLS 461 (569)
Q Consensus 386 ~~~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~ 461 (569)
+|..++.+ +.|||++++ |+++.|||++++.+...+- .+|||+|||+|++|+||+++++||.||+||++|++|+
T Consensus 471 -~g~~~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~ 547 (666)
T PLN02654 471 -KGKEIEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIG 547 (666)
T ss_pred -CCCCCCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEEC
Confidence 67777655 789999999 7899999999987765542 2789999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC-CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCC
Q 044926 462 SVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS-KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTG 540 (569)
Q Consensus 462 ~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~G 540 (569)
|.+||.+|.+||+|.+++|++.+++..|+.++++|++.++... +...++|+++++++|+.+++|+.++++++||+|.+|
T Consensus 548 p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sG 627 (666)
T PLN02654 548 TAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSG 627 (666)
T ss_pred HHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCc
Confidence 9999999999999999999999999889999999999877541 112357889999999999999999999999999999
Q ss_pred cccHHHHHHHHHhc
Q 044926 541 KIQKFVLREIAENM 554 (569)
Q Consensus 541 Ki~r~~l~~~~~~~ 554 (569)
|++|+.|++.+.+.
T Consensus 628 Ki~r~~l~~~~~~~ 641 (666)
T PLN02654 628 KIMRRILRKIASRQ 641 (666)
T ss_pred CchHHHHHHHHcCC
Confidence 99999999998763
No 11
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=5.5e-70 Score=582.04 Aligned_cols=517 Identities=22% Similarity=0.282 Sum_probs=414.1
Q ss_pred HHHHHHHHHHcCCCCeEEe------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 17 LVFLERAATVYGDSPSIIY------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 17 ~~~l~~~a~~~p~~~al~~------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.++|++++..+|+++|+++ ..+.+||+||.++++++|.+|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav 134 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAI 134 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 5788888888999999987 2368999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEcccc---------HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCC
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHS---------RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNI 161 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (569)
++|+++.++.+++.+++++++++++|+++.. ...+.++...... ....+++++...... ..
T Consensus 135 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~~~~~~~--------~~ 204 (628)
T TIGR02316 135 HSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQH--PPPHVLLVDRGLAPM--------RL 204 (628)
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCC--CCCEEEEEeCCCCCc--------Cc
Confidence 9999999999999999999999999997642 2223333322211 134555554321100 00
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHH-HhhhhccCCCCCCCEEEEecCc
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIV-AVNTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~-~~~~~~~~~~~~~d~~~~~~pl 240 (569)
... ....+.++...............++++++|+|||||||.||||.++|.+++.. .......++++++|++++..|+
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 283 (628)
T TIGR02316 205 IPG-RDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDV 283 (628)
T ss_pred ccC-ccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCC
Confidence 000 01345554443221111112245789999999999999999999999997543 3445556788999999999999
Q ss_pred hhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC
Q 044926 241 FHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG 315 (569)
Q Consensus 241 ~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g 315 (569)
.|..++.+ .+.+++.|+++++.+. .++..+++.|+++++|+++++|+++..|.+..........++++|.+++||
T Consensus 284 ~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG 363 (628)
T TIGR02316 284 GWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAG 363 (628)
T ss_pred CeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEec
Confidence 99998754 6778889999988753 578999999999999999999999999987643322222334999999999
Q ss_pred CCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCC
Q 044926 316 APPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRD 394 (569)
Q Consensus 316 ~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~ 394 (569)
+++++.+.++++ .++..+++.||+||++..+....... . .......++|.|.+++ +++|+|+++|++++.+
T Consensus 364 e~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~--~-----~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g 435 (628)
T TIGR02316 364 EPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGL--D-----LKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN 435 (628)
T ss_pred CCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCC--C-----cCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC
Confidence 999999999887 56899999999999985544322110 0 0012235779999999 9999998888888877
Q ss_pred CCceeEEEEecC---cccccccCCcccccccc---CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHH
Q 044926 395 GSTLGEIVLRGG---CIMLGYLKDPIGTRKCM---TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESV 468 (569)
Q Consensus 395 ~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~ 468 (569)
+.|||+++|| ..+.||+++++.+...+ ..++||+|||+|++++||+++++||.||+||++|++|+|.+||.+
T Consensus 436 --~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~ 513 (628)
T TIGR02316 436 --EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEES 513 (628)
T ss_pred --CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHH
Confidence 8899999998 46789999887665443 136799999999999999999999999999999999999999999
Q ss_pred HHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC------CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcc
Q 044926 469 LYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS------KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKI 542 (569)
Q Consensus 469 l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi 542 (569)
|.+||+|.+++|++.+++..|+.++++|++.++... ....++|+++++++|+.+++|+.++++++||+|++||+
T Consensus 514 l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi 593 (628)
T TIGR02316 514 VSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKL 593 (628)
T ss_pred HHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHH
Confidence 999999999999999999889999999998765321 02357899999999999999999999999999999999
Q ss_pred cHHHHHHHHHhc
Q 044926 543 QKFVLREIAENM 554 (569)
Q Consensus 543 ~r~~l~~~~~~~ 554 (569)
+|+.|++.+...
T Consensus 594 ~r~~L~~~~~~~ 605 (628)
T TIGR02316 594 LRRSIQALAEGR 605 (628)
T ss_pred HHHHHHHHHcCC
Confidence 999999987644
No 12
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.3e-69 Score=576.76 Aligned_cols=519 Identities=27% Similarity=0.374 Sum_probs=418.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEe--------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIY--------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~--------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
..|.|+.++|.++++.+|+++|+++ ..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4678999999999999999999986 34789999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc-----HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCC
Q 044926 83 AVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS-----RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSH 157 (569)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (569)
||+++| +++|+++.++.+++.+++++++++++|++... .+........... .+.++.++............
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~ 177 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPE---LRTVVEVDLARYLPGPKRLA 177 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCc---ceeEEEecCccccccccccc
Confidence 999999 56999999999999999999999999997643 2333333332221 34455444321100000000
Q ss_pred CCCC-C-CCcccchhhHhhhcCCCCc-ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEE
Q 044926 158 HPNI-S-DDQFFSTYESLVAKGDPEF-EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVY 234 (569)
Q Consensus 158 ~~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~ 234 (569)
.+.. . .......+.+.+....... .......++++++++|||||||.||+|.++|+++..++......+++.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~ 257 (632)
T PRK07529 178 VPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTV 257 (632)
T ss_pred ccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEE
Confidence 0000 0 1111344555554432221 11122467899999999999999999999999999888777777888999999
Q ss_pred EEecCchhhhhhhH-HHHHHHhCceEEEeccC---C---HHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCC
Q 044926 235 LWTLPMFHSNGWCF-PWAMAAVGGTNICIRKF---D---ASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAK 307 (569)
Q Consensus 235 ~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~---~---~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~ 307 (569)
++..|++|.+++.. .+.++..|+++++.++. + ...+++.++++++|++.++|+++..|++.... ..+++ +
T Consensus 258 l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~--s 334 (632)
T PRK07529 258 FCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDIS--S 334 (632)
T ss_pred EEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCcc--c
Confidence 99999999988865 56778889988887531 1 36789999999999999999999999986532 22344 9
Q ss_pred CceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEe--C
Q 044926 308 PVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVL--D 384 (569)
Q Consensus 308 l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~--d 384 (569)
+|.+++||+++++++.++++ .+++++++.||+||++..+..+... ......++|.|.++. .++|+ |
T Consensus 335 lr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~svG~~~p~~-~v~i~~~d 403 (632)
T PRK07529 335 LRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD----------GERRIGSVGLRLPYQ-RVRVVILD 403 (632)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc----------ccccCCCcccccCCc-eEEEEEcC
Confidence 99999999999999999998 5799999999999998665443211 112345789999988 88875 5
Q ss_pred CCCC---cccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeee
Q 044926 385 PKSG---VSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLS 461 (569)
Q Consensus 385 ~~~~---~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~ 461 (569)
+ +| ..++.| +.|||+++||+++.||++++. +...+..++||+|||+|++++||++++.||.+|+||.+|++|+
T Consensus 404 ~-~g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~ 479 (632)
T PRK07529 404 D-AGRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNID 479 (632)
T ss_pred C-CCcccccCCCC--CceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEEC
Confidence 4 34 566766 899999999999999998754 4455555899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCC-CCccccEEEEecccCCCCCC
Q 044926 462 SVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLP-HYMVPKTVVFMDELPKTSTG 540 (569)
Q Consensus 462 ~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~~~~iP~t~~G 540 (569)
|.+||+.|.+||+|.+++|++.+++..|+.++++|++.++.. .+.++++++++++++ .+++|..++++++||+|++|
T Consensus 480 p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~--~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~G 557 (632)
T PRK07529 480 PAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGAS--ATEAELLAFARDHIAERAAVPKHVRILDALPKTAVG 557 (632)
T ss_pred HHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCC--CCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCC
Confidence 999999999999999999999999988999999999988765 678899999999997 47999999999999999999
Q ss_pred cccHHHHHHHHHh
Q 044926 541 KIQKFVLREIAEN 553 (569)
Q Consensus 541 Ki~r~~l~~~~~~ 553 (569)
|++|++|++.+..
T Consensus 558 Ki~r~~Lr~~~~~ 570 (632)
T PRK07529 558 KIFKPALRRDAIR 570 (632)
T ss_pred cccHHHHHHHHHH
Confidence 9999999987765
No 13
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-69 Score=570.41 Aligned_cols=528 Identities=27% Similarity=0.361 Sum_probs=438.4
Q ss_pred CCCCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 6 PSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSI-GISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
+.+...++.|+.++|.+++..+|+++|+++.++.+||+||.+++.++|..|.+. |+++||+|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 81 (546)
T PRK08314 2 PKSLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAI 81 (546)
T ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 345667889999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccc-------cccCC
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAV-------SSQSH 157 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 157 (569)
+++|++++|++|..+.+++.++++.++++++|++.+....+........ ...++.......... .....
T Consensus 82 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (546)
T PRK08314 82 LRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLR----LRHVIVAQYSDYLPAEPEIAVPAWLRA 157 (546)
T ss_pred HHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccC----cceEEEecchhhcccccccCccccccc
Confidence 9999999999999999999999999999999999887766655433321 233333221110000 00000
Q ss_pred CCCC--CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEE
Q 044926 158 HPNI--SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYL 235 (569)
Q Consensus 158 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~ 235 (569)
.... ........+++.+..... .......++++++++|||||||.||+|.++|++++.++......+++..+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l 235 (546)
T PRK08314 158 EPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVL 235 (546)
T ss_pred ccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEE
Confidence 0000 000112345554443221 112235678999999999999999999999999999888877778889999999
Q ss_pred EecCchhhhhhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEe
Q 044926 236 WTLPMFHSNGWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTA 314 (569)
Q Consensus 236 ~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~ 314 (569)
+..|++|..|+.. .+.++..|+++++.+.+++..+++.++++++|++.++|.++..+.+........+. ++|.+++|
T Consensus 236 ~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~--~l~~~~~g 313 (546)
T PRK08314 236 AVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLS--SLRYIGGG 313 (546)
T ss_pred EEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCch--hhheeeec
Confidence 9999999999865 56778899999999889999999999999999999999999998876544444444 89999999
Q ss_pred CCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCC
Q 044926 315 GAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKR 393 (569)
Q Consensus 315 g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~ 393 (569)
|+++++.+.+++. .+++++++.||+||++......... .....++|.|.++. +++|+|++++..++.
T Consensus 314 G~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~ 381 (546)
T PRK08314 314 GAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPP 381 (546)
T ss_pred cccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCC
Confidence 9999999999987 5799999999999998665432210 11235789999998 999999888888888
Q ss_pred CCCceeEEEEecCcccccccCCccccccccC---CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926 394 DGSTLGEIVLRGGCIMLGYLKDPIGTRKCMT---DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY 470 (569)
Q Consensus 394 ~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~ 470 (569)
+ +.|||+++|++++.||+++++.+...|. +++||+|||+|+++++|.+++.||.+|+|+++|++|+|.+||++|.
T Consensus 382 g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~ 459 (546)
T PRK08314 382 G--EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY 459 (546)
T ss_pred C--CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH
Confidence 7 7899999999999999999988877763 2459999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
++|+|.+++|++.++...++.++++++..++.....+.++++++++++++++++|..++++++||+|.+||++|++|++.
T Consensus 460 ~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~ 539 (546)
T PRK08314 460 KHPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQ 539 (546)
T ss_pred hCcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHH
Confidence 99999999999999988888999999987765433567899999999999999999999999999999999999999887
Q ss_pred HHhcC
Q 044926 551 AENMG 555 (569)
Q Consensus 551 ~~~~~ 555 (569)
.+...
T Consensus 540 ~~~~~ 544 (546)
T PRK08314 540 EKARA 544 (546)
T ss_pred Hhhhc
Confidence 76543
No 14
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.3e-70 Score=585.69 Aligned_cols=520 Identities=22% Similarity=0.263 Sum_probs=410.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEe----CC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIY----NN-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELH 81 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~----~~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~ 81 (569)
....|+.++|+++++.+|+++|+.+ .+ +.+||+||.++++++|.+|++.|+++||+|+|+++|+++|++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 3456899999999999999999953 11 46999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCC
Q 044926 82 FAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNI 161 (569)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (569)
+||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+. .+.++.++...... .... .
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~---l~~ii~~~~~~~~~-~~~~----~ 192 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPS---VRLIVVVGGADEPL-PSLP----S 192 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCC---ceEEEEECCCchhh-hhhh----c
Confidence 99999999999999999999999999999999999998776665554433321 34455443221100 0000 0
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCch
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMF 241 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~ 241 (569)
..+.....++++++.............++|+++|+|||||||.||||.+||+++...+......+++.++|++++.+|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~ 272 (651)
T PLN02736 193 GTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLA 272 (651)
T ss_pred cCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHH
Confidence 00111345666665433221122235678999999999999999999999999999888888888899999999999999
Q ss_pred hhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCC------------------------
Q 044926 242 HSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRD------------------------ 297 (569)
Q Consensus 242 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~------------------------ 297 (569)
|.+++...+.+++.|+++++.+. ++..+++.|++++||+++++|.++..+.+...
T Consensus 273 h~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (651)
T PLN02736 273 HIYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQA 351 (651)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999887888888998877654 88899999999999999999999988765310
Q ss_pred -----CCCC------------CCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCc
Q 044926 298 -----PDKK------------PLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLP 359 (569)
Q Consensus 298 -----~~~~------------~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~ 359 (569)
.... .+ .+++|.+++||+++++++.+.+. .+++++++.||+||+++.++.....
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l-g~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~------- 423 (651)
T PLN02736 352 LENGKNPSPMWDRLVFNKIKAKL-GGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG------- 423 (651)
T ss_pred HHcCCCCCchHHHHHHHHHHHHh-cCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC-------
Confidence 0000 01 03799999999999999999988 5799999999999997665543211
Q ss_pred HHHHhhhhcccCcccccceeeEEeCCCCCcccCCC-CCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEe
Q 044926 360 AAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRD-GSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMH 438 (569)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~-~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 438 (569)
.....++|.|.+++ +++|+|.+++.....+ ..+.|||+++||+++.||+++++.+...|..+|||+|||+|+++
T Consensus 424 ----~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d 498 (651)
T PLN02736 424 ----DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWL 498 (651)
T ss_pred ----CCCCCccCCccCce-EEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEc
Confidence 11345789999999 9999985443211111 11469999999999999999999999999779999999999999
Q ss_pred cCCcEEEeccCCCeEEe-CceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCC------CCCCHHHH
Q 044926 439 SDGYLEIKDRSKDVIIS-GGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSK------SKPTEKEM 511 (569)
Q Consensus 439 ~dg~l~~~GR~~~~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~l 511 (569)
+||++++.||.+|+||+ +|++|+|.+||.+|.++|.|.+|+|++. .+++.++++|++.++.- ......++
T Consensus 499 ~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~ 575 (651)
T PLN02736 499 PGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDL 575 (651)
T ss_pred CCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCH
Confidence 99999999999999995 7999999999999999999999999984 24678999998865310 00111223
Q ss_pred HHHHh------------------ccCCCCccccEEEEecccC------CCCCCcccHHHHHHHHHhcC
Q 044926 512 IEYCR------------------GRLPHYMVPKTVVFMDELP------KTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 512 ~~~l~------------------~~l~~~~~p~~~~~~~~iP------~t~~GKi~r~~l~~~~~~~~ 555 (569)
.++++ +.|+.+++|+.++++++.| +|++||++|+++++.|++..
T Consensus 576 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i 643 (651)
T PLN02736 576 KQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAI 643 (651)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHH
Confidence 22222 3699999999999999876 79999999999999987653
No 15
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.3e-69 Score=578.31 Aligned_cols=515 Identities=25% Similarity=0.347 Sum_probs=417.4
Q ss_pred chHHHHHHHHHHcCCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcc
Q 044926 15 TPLVFLERAATVYGDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAA 88 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 88 (569)
...++|+++++.+|+++|+++.+ +.+||+||.+++.++|..|++.|+++||+|+++++|+++++++++||+++|
T Consensus 58 ~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G 137 (625)
T TIGR02188 58 VSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIG 137 (625)
T ss_pred HHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 45678888888999999998743 489999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc---------HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 89 AVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS---------RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
++++|+++.++.+++.+++++++++++|+++.. ...+.+.....+. ....++++.......
T Consensus 138 av~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------- 207 (625)
T TIGR02188 138 AIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV--SVEHVLVVRRTGNPV-------- 207 (625)
T ss_pred CEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC--CccEEEEEcCCCCCc--------
Confidence 999999999999999999999999999998753 2333333332221 134455543321100
Q ss_pred CCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHh-hhhccCCCCCCCEEEEec
Q 044926 160 NISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAV-NTLSDWSVPTQPVYLWTL 238 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~-~~~~~~~~~~~d~~~~~~ 238 (569)
..... ....+.+++....... ......++++++|+|||||||.||||+++|.+++.... .....+++.++|++++..
T Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 285 (625)
T TIGR02188 208 PWVEG-RDVWWHDLMAKASAYC-EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTA 285 (625)
T ss_pred Ccccc-ccccHHHHHhhcCCCC-CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECC
Confidence 00000 0133555544322211 12235678999999999999999999999999765443 344456888999999999
Q ss_pred CchhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEE
Q 044926 239 PMFHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVT 313 (569)
Q Consensus 239 pl~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~ 313 (569)
|+.|..+..+ .+.+++.|+++++.+. .++..+++.++++++|++.++|+++..|.+..........++++|.+++
T Consensus 286 ~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~ 365 (625)
T TIGR02188 286 DVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGS 365 (625)
T ss_pred CchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEE
Confidence 9999988755 6777889999988753 4799999999999999999999999999987644333333459999999
Q ss_pred eCCCCcHHHHHHHH-hcC---CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCc
Q 044926 314 AGAPPPAAVLLRTE-SLG---FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGV 389 (569)
Q Consensus 314 ~g~~l~~~~~~~~~-~~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~ 389 (569)
+|+++++++.+++. .++ +++++.||+||+++.++..... .......++|.|.+++ +++|+|+ +|.
T Consensus 366 ~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~~~~G~p~~g~-~~~i~d~-~g~ 434 (625)
T TIGR02188 366 VGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---------ATPTKPGSATLPFFGI-EPAVVDE-EGN 434 (625)
T ss_pred ecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC---------CCCcCCCcccCCcCCc-eEEEECC-CCC
Confidence 99999999999887 443 8899999999998776543211 0112345789999998 9999995 777
Q ss_pred ccC-CCCCceeEEEEec--CcccccccCCccccccccC--CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHH
Q 044926 390 SAK-RDGSTLGEIVLRG--GCIMLGYLKDPIGTRKCMT--DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVE 464 (569)
Q Consensus 390 ~~~-~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~ 464 (569)
.++ .+ +.|||+++| |+++.|||++++.+...+. .+|||+|||+|++++||++++.||.||+||++|++|+|.+
T Consensus 435 ~~~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~e 512 (625)
T TIGR02188 435 PVEGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAE 512 (625)
T ss_pred CCCCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHH
Confidence 777 66 899999999 6899999999987666553 3789999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCC-CCHHHHHHHHhccCCCCccccEEEEecccCCCCCCccc
Q 044926 465 VESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSK-PTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQ 543 (569)
Q Consensus 465 iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~ 543 (569)
||++|.++|+|.+++|++.+++..|+.++++|++.++.... ...++|+++++++|+.+++|+.|+++++||+|++||++
T Consensus 513 IE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~ 592 (625)
T TIGR02188 513 IESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIM 592 (625)
T ss_pred HHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccch
Confidence 99999999999999999999998899999999988765411 13478999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc
Q 044926 544 KFVLREIAENM 554 (569)
Q Consensus 544 r~~l~~~~~~~ 554 (569)
|+.|++++...
T Consensus 593 r~~l~~~~~~~ 603 (625)
T TIGR02188 593 RRLLRKIAAGE 603 (625)
T ss_pred HHHHHHHHcCC
Confidence 99999998754
No 16
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.4e-68 Score=563.89 Aligned_cols=508 Identities=31% Similarity=0.464 Sum_probs=427.1
Q ss_pred CCCCCCCCCchHHHHHHHHHHcCCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH
Q 044926 6 PSPANSTPLTPLVFLERAATVYGDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYE 79 (569)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~ 79 (569)
.....|++.|+.++|++.++.+|+++|+++.+ +.+||.||.++++++|.+|.+.|+++||+|+++++|++++++
T Consensus 16 ~~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~ 95 (547)
T PRK13295 16 IAAGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTV 95 (547)
T ss_pred hcCCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHH
Confidence 34556888899999999999999999999865 899999999999999999999999999999999999999999
Q ss_pred HHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHHHHHhcCCCCCCCCCEEEEeCCCcccccc
Q 044926 80 LHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSR-----ALVREAVSLFPPDLKPPPLVLISDDDDAAVSS 154 (569)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (569)
++|||+++|++++|++|.++.+++.++++.++++++|+++... +...+...... ....++.++....
T Consensus 96 ~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----- 167 (547)
T PRK13295 96 LYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP---ALRHVVVVGGDGA----- 167 (547)
T ss_pred HHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC---CcceEEEecCCCc-----
Confidence 9999999999999999999999999999999999999987642 22222222221 1334444433211
Q ss_pred cCCCCCCCCCcccchhhHhhhcC-----CC--CcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC
Q 044926 155 QSHHPNISDDQFFSTYESLVAKG-----DP--EFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS 227 (569)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~ 227 (569)
..+.+++... .. ..........+++++++|||||||.||+|.++|++++..+......++
T Consensus 168 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 234 (547)
T PRK13295 168 -------------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLG 234 (547)
T ss_pred -------------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhC
Confidence 1222222111 00 000111245689999999999999999999999999988888777888
Q ss_pred CCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcC
Q 044926 228 VPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLA 306 (569)
Q Consensus 228 ~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~ 306 (569)
+..++++++..|++|..++.. .+.++..|+++++.+.+++..+++.++++++|++.++|.++..+..........++
T Consensus 235 ~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~-- 312 (547)
T PRK13295 235 LGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVS-- 312 (547)
T ss_pred CCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcc--
Confidence 999999999999999998765 66778899999888888999999999999999999999999999887655444555
Q ss_pred CCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCC
Q 044926 307 KPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDP 385 (569)
Q Consensus 307 ~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~ 385 (569)
++|.+++||+++++.+.++++ .+++++++.||+||++.....+.... .......+|.|.+++ .++|+|+
T Consensus 313 ~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~ 382 (547)
T PRK13295 313 SLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDA 382 (547)
T ss_pred cceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECC
Confidence 899999999999999999987 57999999999999976554432111 111234679999988 9999997
Q ss_pred CCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHH
Q 044926 386 KSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEV 465 (569)
Q Consensus 386 ~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~i 465 (569)
++.+++.| +.|||+++|+.++.||+++++.+... .+|||+|||+|+++++|++++.||.+|+++.+|++|+|.+|
T Consensus 383 -~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~I 457 (547)
T PRK13295 383 -DGAPLPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEI 457 (547)
T ss_pred -CCCCCCCC--CCCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHH
Confidence 57777777 89999999999999999999887765 47899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhc-cCCCCccccEEEEecccCCCCCCcccH
Q 044926 466 ESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRG-RLPHYMVPKTVVFMDELPKTSTGKIQK 544 (569)
Q Consensus 466 E~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~iP~t~~GKi~r 544 (569)
|++|.++++|.+++|++.+++..|+.++++|++.++.. ...+++++++++ .++.+++|..++++++||+|.+||++|
T Consensus 458 E~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r 535 (547)
T PRK13295 458 EALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQS--LDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQK 535 (547)
T ss_pred HHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCCC--CCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccH
Confidence 99999999999999999998888888999999876644 677899999986 799999999999999999999999999
Q ss_pred HHHHHHHHh
Q 044926 545 FVLREIAEN 553 (569)
Q Consensus 545 ~~l~~~~~~ 553 (569)
++|++++.+
T Consensus 536 ~~L~~~~~~ 544 (547)
T PRK13295 536 FRLREMLRG 544 (547)
T ss_pred HHHHHHHhc
Confidence 999998866
No 17
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3e-69 Score=565.95 Aligned_cols=499 Identities=18% Similarity=0.231 Sum_probs=403.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNN-ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~-~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
+...++.+.|.+.++.+|+++|+.+.+ +.+||+||.++++++|..|.+ .+||+|+|+++|++++++++|||+++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~ 92 (539)
T PRK06334 16 RSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGK 92 (539)
T ss_pred CcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCC
Confidence 566889999999999999999998765 689999999999999999987 3899999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|+++..+.+++.++++.++++++|++.+....+.+....... . ...++.+.+... . ..
T Consensus 93 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~-~----------------~~ 153 (539)
T PRK06334 93 IPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAE-Y-PFSLIYMEEVRK-E----------------LS 153 (539)
T ss_pred eeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhcccc-c-cccEEEEehhhh-h----------------cc
Confidence 999999999999999999999999999987766554443221000 0 122333322100 0 00
Q ss_pred hhHhhh-----c-CCC---CcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCc
Q 044926 170 YESLVA-----K-GDP---EFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 170 ~~~~~~-----~-~~~---~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl 240 (569)
+.+... . ... .........++++++++|||||||.||+|.++|+++..........++++.+|++++.+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~ 233 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPP 233 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecch
Confidence 000000 0 000 0000112457899999999999999999999999999888777777888999999999999
Q ss_pred hhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCC
Q 044926 241 FHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPP 318 (569)
Q Consensus 241 ~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l 318 (569)
+|.+++.. .+.+++.|+++++.. .+++..+++.|+++++|++.++|+++..|++........++ ++|.+++||+++
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~i~~gG~~l 311 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLP--SLRFVVIGGDAF 311 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccc--cccEEEECCccC
Confidence 99999865 567788899887765 47999999999999999999999999999887644444444 999999999999
Q ss_pred cHHHHHHHH-hc-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCC
Q 044926 319 PAAVLLRTE-SL-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGS 396 (569)
Q Consensus 319 ~~~~~~~~~-~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~ 396 (569)
++.+.+++. .+ ++.+++.||+||++.++...... ......++|.|.+++ +++|+|++++.+++.|
T Consensus 312 ~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g-- 378 (539)
T PRK06334 312 KDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVN----------SPKHESCVGMPIRGM-DVLIVSEETKVPVSSG-- 378 (539)
T ss_pred CHHHHHHHHHHCCCCeEEecccccccCceEEeccCC----------CCCCCCcCceecCCC-EEEEEcCCCCccCCCC--
Confidence 999999988 45 68999999999998666543211 011234689999998 9999998788888887
Q ss_pred ceeEEEEecCcccccccCCcccccccc-CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCc
Q 044926 397 TLGEIVLRGGCIMLGYLKDPIGTRKCM-TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAV 475 (569)
Q Consensus 397 ~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i 475 (569)
+.|||+++|++++.||+++++.+.... ..++||+|||+|+++++|++++.||.+|+||++|++|+|.+||++|.+||+|
T Consensus 379 ~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v 458 (539)
T PRK06334 379 ETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQ 458 (539)
T ss_pred ceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCC
Confidence 899999999999999999987654322 3467999999999999999999999999999999999999999999999999
Q ss_pred ce------eEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc-CCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 476 NE------AAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR-LPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 476 ~~------~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
.+ ++|++.+++. ..++++++. . .+.++++++++++ ++.|+.|..++++++||+|++||++|++|+
T Consensus 459 ~~~~~~~~~~v~~~~~~~--~~~~~~~~~--~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~ 530 (539)
T PRK06334 459 NAADHAGPLVVCGLPGEK--VRLCLFTTF--P----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLN 530 (539)
T ss_pred ccccccCceEEEcCCCCc--eEEEEEEec--c----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHH
Confidence 97 7777776432 234444442 1 2457899999886 788999999999999999999999999999
Q ss_pred HHHHhc
Q 044926 549 EIAENM 554 (569)
Q Consensus 549 ~~~~~~ 554 (569)
+....+
T Consensus 531 ~~~~~~ 536 (539)
T PRK06334 531 ALAKSL 536 (539)
T ss_pred HHHHHh
Confidence 987764
No 18
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-68 Score=561.27 Aligned_cols=494 Identities=27% Similarity=0.360 Sum_probs=415.6
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
+.++.++|.++++++|+++|+++.++.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 47899999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|+++.++.+++.++++.++++++|++.+....+......... ...++.+.+... ...++.
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------------~~~~~~ 181 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQ---ATRIVAWTDEDH-----------------DLTVEV 181 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccc---cceEEEecCCcc-----------------cccHHH
Confidence 999999999999999999999999998776655444322111 122222221100 012333
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHH
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~ 252 (569)
+....... . ....+++.++++|||||||.||+|.++|++++.........+.+..+++++...|++|.+++...+.+
T Consensus 182 ~~~~~~~~-~--~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 258 (537)
T PRK13382 182 LIAAHAGQ-R--PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLA 258 (537)
T ss_pred HhhccCcC-C--CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHH
Confidence 33221111 1 11345789999999999999999999999888877777777788899999999999999999878888
Q ss_pred HHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCC
Q 044926 253 AAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGF 331 (569)
Q Consensus 253 ~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~ 331 (569)
+..|+++++...+++..+++.|+++++|++.++|+++..+.+............++|.+++||+++++.+.+.+. .++.
T Consensus 259 l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~ 338 (537)
T PRK13382 259 ASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGD 338 (537)
T ss_pred HhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCC
Confidence 889999888888999999999999999999999999999987653322222233899999999999999999987 5788
Q ss_pred eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccccc
Q 044926 332 KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLG 411 (569)
Q Consensus 332 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 411 (569)
++++.||+||++.++..+. ........++|.|.+++ .++|+|+ ++.+++.| +.|||+++|++++.|
T Consensus 339 ~i~~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~g 404 (537)
T PRK13382 339 VIYNNYNATEAGMIATATP----------ADLRAAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQFDG 404 (537)
T ss_pred cEEecccccccCcceecCh----------hHhccCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCcccC
Confidence 9999999999987655432 11122345789999998 9999998 67778777 899999999999999
Q ss_pred ccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCce
Q 044926 412 YLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGET 491 (569)
Q Consensus 412 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~ 491 (569)
|+ ++.+. .+. ++||+|||++++++||++++.||.+|+||.+|++|++.+||..|.++|+|.+++|++.+++..|+.
T Consensus 405 Y~--~~~~~-~~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~ 480 (537)
T PRK13382 405 YT--SGSTK-DFH-DGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQR 480 (537)
T ss_pred cc--ccchh-hcc-CCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCE
Confidence 98 33332 344 789999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHH
Q 044926 492 PCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549 (569)
Q Consensus 492 ~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~ 549 (569)
++++|++.++.. ...++++++++++|+.+++|..++++++||+|++||++|++|++
T Consensus 481 ~~a~vv~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 481 LAAFVVLKPGAS--ATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEEEECCCCC--CCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 999999876654 67789999999999999999999999999999999999999864
No 19
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=2.3e-68 Score=561.38 Aligned_cols=507 Identities=27% Similarity=0.394 Sum_probs=426.9
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYN--NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
..+|+.+++.+++..+|+++|+++. ++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 21 ~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~ 100 (537)
T PLN02246 21 NHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGA 100 (537)
T ss_pred CCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCE
Confidence 4568999999999999999999875 47899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|++|..+.+++.++++.++++++|++....+.+.+..... ...++.++.... ....
T Consensus 101 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~----------------~~~~ 159 (537)
T PLN02246 101 VTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDD-----GVTVVTIDDPPE----------------GCLH 159 (537)
T ss_pred EEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcC-----CceEEEeCCCCC----------------Ccee
Confidence 9999999999999999999999999999987766655443211 123333332110 0133
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc----cCCCCCCCEEEEecCchhhhh
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS----DWSVPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~pl~~~~g 245 (569)
+.++........ ......++++++++|||||||.||+|.++|+++......... .+++..+|++++..|++|.++
T Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 160 FSELTQADENEL-PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HHHHhcCCCCCC-CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHH
Confidence 444333222111 112345789999999999999999999999999876654432 467889999999999999999
Q ss_pred hhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHH
Q 044926 246 WCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLL 324 (569)
Q Consensus 246 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~ 324 (569)
+.. .+.++..|+++++.+.+++..+++.|+++++|++.++|.++..|++........++ ++|.+++||+.+++++.+
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~lr~~~~gg~~l~~~~~~ 316 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLS--SIRMVLSGAAPLGKELED 316 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCcc--ceeEEEEecCcCCHHHHH
Confidence 865 55667889999999889999999999999999999999999999887654444444 899999999999999999
Q ss_pred HHHh-c-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEE
Q 044926 325 RTES-L-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIV 402 (569)
Q Consensus 325 ~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 402 (569)
.+++ + ++.+++.||+||++.++..+..... ........++|.|.++. +++|+|++++.+++.| +.|||+
T Consensus 317 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~ 387 (537)
T PLN02246 317 AFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEIC 387 (537)
T ss_pred HHHHHcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEE
Confidence 9884 4 7889999999999876554321100 00111234689999998 9999998889888887 889999
Q ss_pred EecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEe
Q 044926 403 LRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVA 482 (569)
Q Consensus 403 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 482 (569)
++|+.++.||+++++.+...+..++||+|||+|+++++|++++.||.+|+|+.+|++|++.+||+.|.++|+|.+++|++
T Consensus 388 v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 467 (537)
T PLN02246 388 IRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVP 467 (537)
T ss_pred EECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEc
Confidence 99999999999999999888877899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 483 RPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 483 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
.++...++.++++++..++.. ...++++++++++++.++.|..++++++||+|++||++|++|++++.+
T Consensus 468 ~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 468 MKDEVAGEVPVAFVVRSNGSE--ITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred ccCccCCceeEEEEEeCCCCC--CCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 998888888899988876654 677899999999999999999999999999999999999999998754
No 20
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-68 Score=571.29 Aligned_cols=512 Identities=26% Similarity=0.355 Sum_probs=413.8
Q ss_pred HHHHHHHHHHcCCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 17 LVFLERAATVYGDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 17 ~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.++|+++++.+|+++|+++.+ +.+||+||.++++++|.+|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 577888888999999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccH---------HHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCC
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSR---------ALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNI 161 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (569)
++|++|.++.+++.+++++++++++|+++... +.+.+...... ....++.+....... ..
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--------~~ 218 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP---SVEKVIVVRRTGGDV--------DW 218 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC---CccEEEEEcCCCCCc--------Cc
Confidence 99999999999999999999999999976532 22333332222 134455444321100 00
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHh-hhhccCCCCCCCEEEEecCc
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAV-NTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~-~~~~~~~~~~~d~~~~~~pl 240 (569)
.. .....+.++....... .......++++++|+|||||||.||||.++|++++.... .....+++..+|++++..|+
T Consensus 219 ~~-~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 296 (637)
T PRK00174 219 VE-GRDLWWHELVAGASDE-CEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADV 296 (637)
T ss_pred CC-CCcccHHHHHhhcCCC-CCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCc
Confidence 00 0013345544332211 112235578999999999999999999999999865443 33445688889999999999
Q ss_pred hhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC
Q 044926 241 FHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG 315 (569)
Q Consensus 241 ~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g 315 (569)
+|..+..+ .+.+++.|+++++.+. .++..+++.|+++++|++.++|+++..|++..........+.++|.++++|
T Consensus 297 ~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G 376 (637)
T PRK00174 297 GWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVG 376 (637)
T ss_pred hHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeC
Confidence 99988754 6777889999888752 479999999999999999999999999988754333333344999999999
Q ss_pred CCCcHHHHHHHH-hcC---CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCccc
Q 044926 316 APPPAAVLLRTE-SLG---FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSA 391 (569)
Q Consensus 316 ~~l~~~~~~~~~-~~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~ 391 (569)
+++++++.+++. .++ +++++.||+||+++.+....... ......++|.|.+++ +++|+|+ +|..+
T Consensus 377 e~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~vG~p~~g~-~~~i~d~-~g~~~ 445 (637)
T PRK00174 377 EPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA---------TPLKPGSATRPLPGI-QPAVVDE-EGNPL 445 (637)
T ss_pred CCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC---------CCcCCCcccCCCCCc-eEEEECC-CCCCC
Confidence 999999998887 444 78999999999987665322110 011235789999998 9999997 67788
Q ss_pred CCCCCceeEEEEec--CcccccccCCcccccccc--CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHH
Q 044926 392 KRDGSTLGEIVLRG--GCIMLGYLKDPIGTRKCM--TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVES 467 (569)
Q Consensus 392 ~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~ 467 (569)
+.| +.|||+++| |++++|||++++.+...+ ..+|||+|||+|++++||++++.||.||+||++|++|+|.+||+
T Consensus 446 ~~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~ 523 (637)
T PRK00174 446 EGG--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIES 523 (637)
T ss_pred CCC--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHH
Confidence 777 889999999 689999999998766654 23789999999999999999999999999999999999999999
Q ss_pred HHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC-CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHH
Q 044926 468 VLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS-KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFV 546 (569)
Q Consensus 468 ~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~ 546 (569)
+|.++|+|.+++|++.+++..|+.++++|++.++... +...++|+++++++|+.++.|..++++++||+|++||++|+.
T Consensus 524 ~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~ 603 (637)
T PRK00174 524 ALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRI 603 (637)
T ss_pred HHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHH
Confidence 9999999999999999998889999999998876541 112578999999999999999999999999999999999999
Q ss_pred HHHHHHhc
Q 044926 547 LREIAENM 554 (569)
Q Consensus 547 l~~~~~~~ 554 (569)
|++...+.
T Consensus 604 L~~~~~~~ 611 (637)
T PRK00174 604 LRKIAEGE 611 (637)
T ss_pred HHHHHcCC
Confidence 99987655
No 21
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-68 Score=557.20 Aligned_cols=491 Identities=28% Similarity=0.443 Sum_probs=419.7
Q ss_pred chHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 15 TPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
.+.++|+++|+.+||++|+++.++.+||+||.++++++|..|++ .|+++|++|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47889999999999999999999999999999999999999986 69999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++..+.+++.++++.++++.++++++....+.+...... ...++.+.+ +.+.
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----------------------~~~~ 135 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY----VQRVISITS-----------------------LKEI 135 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC----cceEEEecc-----------------------hHhh
Confidence 9999999999999999999999999876655544332211 122332221 1111
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PWAM 252 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~~~ 252 (569)
...... ...+...+++++++|||||||.||+|.++|+++..........+++..+|++++..|++|.+|+.. .+.+
T Consensus 136 ~~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 212 (496)
T PRK06839 136 EDRKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPT 212 (496)
T ss_pred hccCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHH
Confidence 111111 111244578999999999999999999999998877666666778899999999999999999866 4566
Q ss_pred HHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCe
Q 044926 253 AAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFK 332 (569)
Q Consensus 253 ~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~ 332 (569)
+..|+++++.+.+++..+++.++++++|++.++|.++..+++........+. ++|.+++||+++++++.+.+++.+++
T Consensus 213 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~~~~gG~~~~~~~~~~~~~~g~~ 290 (496)
T PRK06839 213 LFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQ--SVRWFYNGGAPCPEELMREFIDRGFL 290 (496)
T ss_pred HhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCc--ccceEEECCCCCCHHHHHHHHHhCCe
Confidence 7888888888889999999999999999999999999999987654444444 99999999999999999999877999
Q ss_pred eeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccc
Q 044926 333 VSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGY 412 (569)
Q Consensus 333 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 412 (569)
+++.||+||++..+..+... .......++|.|.++. .++|+|+ .+..++.| +.|||+++|+.++.||
T Consensus 291 ~~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy 357 (496)
T PRK06839 291 FGQGFGMTETSPTVFMLSEE---------DARRKVGSIGKPVLFC-DYELIDE-NKNKVEVG--EVGELLIRGPNVMKEY 357 (496)
T ss_pred eEeeccCCCCCcceEecccc---------cccccCCCCcccCCCc-eEEEECC-CcCCCCCC--CceEEEEECCCcchhh
Confidence 99999999998765443211 1112245789999998 9999998 45557777 8999999999999999
Q ss_pred cCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCcee
Q 044926 413 LKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETP 492 (569)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~ 492 (569)
+++++.+...+. +|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..|+.+
T Consensus 358 ~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~ 436 (496)
T PRK06839 358 WNRPDATEETIQ-DGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIP 436 (496)
T ss_pred cCChHHHHHHHc-CCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceE
Confidence 999998887776 8999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred EEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 493 CAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 493 ~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
+++|+..++.. ...++++++++++++.+++|..++++++||+|.+||++|++|+++.++
T Consensus 437 ~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 437 IAFIVKKSSSV--LIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EEEEEECCCCC--CCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 99999887655 677899999999999999999999999999999999999999988764
No 22
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.8e-68 Score=563.98 Aligned_cols=508 Identities=27% Similarity=0.404 Sum_probs=414.4
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNN--ITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
.+++.+.+... ..+|+++|+++.. ..+||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++|+
T Consensus 39 ~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 117 (560)
T PLN02574 39 NLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGG 117 (560)
T ss_pred CCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCe
Confidence 34444444433 5789999999854 379999999999999999999 8999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|++|..+.+++.++++.++++++|++.+..+.+... ...++.+....... .. ......
T Consensus 118 v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~--------~~~~~~ 178 (560)
T PLN02574 118 IVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL---------GVPVIGVPENYDFD--SK--------RIEFPK 178 (560)
T ss_pred EEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc---------CCcEEecCcccccc--cC--------ccCccc
Confidence 999999999999999999999999999987765544321 11222222110000 00 001233
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc----cCCC-CCCCEEEEecCchhhh
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS----DWSV-PTQPVYLWTLPMFHSN 244 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~----~~~~-~~~d~~~~~~pl~~~~ 244 (569)
+.+++....... ......++++++++|||||||.||+|.++|+++...+..... .+.. ...++++..+|++|.+
T Consensus 179 ~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 257 (560)
T PLN02574 179 FYELIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIY 257 (560)
T ss_pred HHHHhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHH
Confidence 454444332211 112245689999999999999999999999999877665432 2222 3567889999999999
Q ss_pred hhhHH-HHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCC-CCCCCCcCCCceEEEeCCCCcHHH
Q 044926 245 GWCFP-WAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP-DKKPLKLAKPVHLVTAGAPPPAAV 322 (569)
Q Consensus 245 g~~~~-~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~-~~~~~~~~~l~~~~~~g~~l~~~~ 322 (569)
|+... +..+..|+++++.+.+++..+++.|+++++|++.++|+++..+.+.... ....+. ++|.+++||+++++..
T Consensus 258 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~--~lr~~~~gg~~l~~~~ 335 (560)
T PLN02574 258 GLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLK--SLKQVSCGAAPLSGKF 335 (560)
T ss_pred HHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccc--cceEEEEecccCCHHH
Confidence 98764 4556779998888889999999999999999999999999999887533 223344 8999999999999999
Q ss_pred HHHHH-hc-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeE
Q 044926 323 LLRTE-SL-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGE 400 (569)
Q Consensus 323 ~~~~~-~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 400 (569)
.+++. .+ ++.+++.||+||++.++...... .......++|.+.+++ +++|+|++++.+++.| +.||
T Consensus 336 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Ge 403 (560)
T PLN02574 336 IQDFVQTLPHVDFIQGYGMTESTAVGTRGFNT---------EKLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGE 403 (560)
T ss_pred HHHHHHHCCCCcEEecccccccCceeecCCCc---------cccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeE
Confidence 99887 45 78999999999997654421111 0112245789999998 9999998889888887 8999
Q ss_pred EEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEE
Q 044926 401 IVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAV 480 (569)
Q Consensus 401 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 480 (569)
||++|++++.||+++++.+...|..+|||+|||+|++++||++++.||.+|+||++|++|++.+||.+|.+||+|.+++|
T Consensus 404 i~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v 483 (560)
T PLN02574 404 LWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAV 483 (560)
T ss_pred EEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEE
Confidence 99999999999999999998888779999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 481 VARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 481 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
++.+++..|+.++++|+..++.. .+.+++.++++++++.++.|+.++++++||+|++||++|+.|++++.+...+
T Consensus 484 ~~~~~~~~g~~~~a~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 558 (560)
T PLN02574 484 TAVPDKECGEIPVAFVVRRQGST--LSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVSS 558 (560)
T ss_pred EccccCCCCcceEEEEEeCCCCC--CCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcccc
Confidence 99999888888899998876554 6778999999999999999999999999999999999999999998765543
No 23
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.3e-68 Score=557.07 Aligned_cols=527 Identities=30% Similarity=0.473 Sum_probs=430.4
Q ss_pred CCCCCCCCchHHHHHHHHHHcCCCCeEEeC--C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 7 SPANSTPLTPLVFLERAATVYGDSPSIIYN--N--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~al~~~--~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
.++...+.++.++|++++..+|+..++.+. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~l 82 (539)
T PRK07008 3 GQMMDMPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYY 82 (539)
T ss_pred cccccCCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 456667789999999999999999888752 2 689999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCC
Q 044926 83 AVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNIS 162 (569)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (569)
||+++|++++|++|..+.+++.++++.+++++++++.+..+.+.+....... ...++.+.+..... ..
T Consensus 83 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~- 150 (539)
T PRK07008 83 GVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPN---VKGWVAMTDAAHLP--------AG- 150 (539)
T ss_pred HHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCC---ceEEEEEccCCccc--------cC-
Confidence 9999999999999999999999999999999999998877665555443321 23333333221100 00
Q ss_pred CCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHH--hhhhccCCCCCCCEEEEecCc
Q 044926 163 DDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVA--VNTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~--~~~~~~~~~~~~d~~~~~~pl 240 (569)
......++++......... .....++++++++|||||||.||+|.+||++++.+. ......+++..+|++++..|+
T Consensus 151 -~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~ 228 (539)
T PRK07008 151 -STPLLCYETLVGAQDGDYD-WPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPM 228 (539)
T ss_pred -CcccccHHHHhcccCCCcC-cccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCch
Confidence 0113445555443322211 123456789999999999999999999999986543 233346778899999999999
Q ss_pred hhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCc
Q 044926 241 FHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPP 319 (569)
Q Consensus 241 ~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~ 319 (569)
+|.+++...+.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+........+. ++|.++++|++++
T Consensus 229 ~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~--~l~~~~~~G~~l~ 306 (539)
T PRK07008 229 FHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFS--TLRRTVIGGSACP 306 (539)
T ss_pred HHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcc--cceEEEEcCCCCC
Confidence 99988877778888999988874 47899999999999999999999999999987655544444 9999999999999
Q ss_pred HHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCce
Q 044926 320 AAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTL 398 (569)
Q Consensus 320 ~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~ 398 (569)
+.+.+++. .+++++++.||+||++..+..+.........+..........+|.|.+++ .++|+|+ ++..++.++++.
T Consensus 307 ~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~ 384 (539)
T PRK07008 307 PAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAF 384 (539)
T ss_pred HHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECC-CCCccCCCCCcc
Confidence 99999986 67999999999999987665443222111111111122345789999998 9999997 677776654467
Q ss_pred eEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCccee
Q 044926 399 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEA 478 (569)
Q Consensus 399 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~ 478 (569)
|||+++|++++.||++++. ..+. ++||+|||+|++++||++++.||.+|+|+.+|.+++|.+||..|.++|.|.++
T Consensus 385 Gei~v~g~~~~~gy~~~~~---~~~~-~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~ 460 (539)
T PRK07008 385 GDLQVRGPWVIDRYFRGDA---SPLV-DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEA 460 (539)
T ss_pred eEEEEeCCccchhhcCChh---hhhc-CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEE
Confidence 9999999999999999873 2344 78999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 479 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
++++.+++.+++.++++|+..++.. .+.++++++++++++++++|..++++++||+|.+||++|++|++++.+...+
T Consensus 461 ~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~~ 537 (539)
T PRK07008 461 ACIACAHPKWDERPLLVVVKRPGAE--VTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVLP 537 (539)
T ss_pred EEEecCCchhccceEEEEEeCCCCc--cCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhccc
Confidence 9999999887888888888776654 6788999999999999999999999999999999999999999999886543
No 24
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-68 Score=556.84 Aligned_cols=507 Identities=33% Similarity=0.503 Sum_probs=434.7
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
...++.++|.+.+..+|+++|+++.++++||+||.+.+.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhh
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYE 171 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
+|+++..+.+++.+++++++++++++++............... ...++......... .......++
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----------~~~~~~~~~ 148 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPA---LEHVVICETEEDDP-----------HTEKMKTFT 148 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCC---ccEEEEEcCccccc-----------CccccccHH
Confidence 9999999999999999999999999998876655544332221 33444443322110 000124556
Q ss_pred HhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HH
Q 044926 172 SLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PW 250 (569)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~ 250 (569)
+++...... .......++++++++|||||||.||+|.++|.++...+......++++.+|++++..|++|.+++.. .+
T Consensus 149 ~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
T PRK07656 149 DFLAAGDPA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVN 227 (513)
T ss_pred HHHhcCCCC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHH
Confidence 655443321 1222356789999999999999999999999999988888888889999999999999999999876 56
Q ss_pred HHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hc
Q 044926 251 AMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SL 329 (569)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~ 329 (569)
.++..|+++++.+..++..+++.|+++++|++.++|.++..+++........+. ++|.+++||+++++++.+++. .+
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~l~~v~~~g~~~~~~~~~~~~~~~ 305 (513)
T PRK07656 228 APLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLS--SLRLAVTGAASMPVALLERFESEL 305 (513)
T ss_pred HHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCcc--ceeeEEecCCCCCHHHHHHHHHHc
Confidence 778888888888888999999999999999999999999999998765554555 999999999999999999987 67
Q ss_pred CC-eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcc
Q 044926 330 GF-KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCI 408 (569)
Q Consensus 330 ~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 408 (569)
++ .+++.||+||+++++..+...... .....++|.|.++. +++|+|+ .+..++.| +.|||+++|+.+
T Consensus 306 ~~~~~~~~YG~tE~~~~~~~~~~~~~~--------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~ 373 (513)
T PRK07656 306 GVDIVLTGYGLSEASGVTTFNRLDDDR--------KTVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNV 373 (513)
T ss_pred CCCceEeEEccccCCCceeecCccccc--------cccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchh
Confidence 88 899999999998887765432211 11245789999998 9999997 67888877 889999999999
Q ss_pred cccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCC
Q 044926 409 MLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFW 488 (569)
Q Consensus 409 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~ 488 (569)
+.||++++..+...+..++||+|||+|+++++|.+++.||.+|+++++|.++++.+||+.|.++++|.+++|++.+++..
T Consensus 374 ~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~ 453 (513)
T PRK07656 374 MKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERL 453 (513)
T ss_pred hhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCccc
Confidence 99999999888888877899999999999999999999999999999999999999999999999999999999998888
Q ss_pred CceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHH
Q 044926 489 GETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549 (569)
Q Consensus 489 ~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~ 549 (569)
|+.++++|+..++.. .+.++++++++++|+++++|..++++++||+|++||++|++|++
T Consensus 454 g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 454 GEVGKAYVVLKPGAE--LTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred CceEEEEEEECCCCC--CCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 888889998876444 67889999999999999999999999999999999999999975
No 25
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.9e-68 Score=560.67 Aligned_cols=518 Identities=25% Similarity=0.322 Sum_probs=418.3
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
.|+.++|+++++.+|+++|++..++.+||+||.++++++|..|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 589999999999999999999999999999999999999999997 5999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCccccccc---C-----CCC--CCC
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQ---S-----HHP--NIS 162 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~--~~~ 162 (569)
|++|..+.+++.+++++++++++|++.+..+.+.+...... .+.++.....+....... . ... ...
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTG----VKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccC----cceeEEecccccccchhhhhcccchhhcccccccc
Confidence 99999999999999999999999998876665544432211 233333221110000000 0 000 000
Q ss_pred CCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC--CC-CCCEEEEecC
Q 044926 163 DDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS--VP-TQPVYLWTLP 239 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~--~~-~~d~~~~~~p 239 (569)
.......+.+.+..............++++++++|||||||.||+|.++|+++..........+. +. ..+++++.+|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p 259 (562)
T PRK05677 180 HLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLP 259 (562)
T ss_pred CCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCc
Confidence 00012234444433222111122346789999999999999999999999999876655444333 33 3468899999
Q ss_pred chhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCC
Q 044926 240 MFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAP 317 (569)
Q Consensus 240 l~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~ 317 (569)
++|.+++.. .+..+..|+..++.+ ..++..+++.++++++|.+.++|+++..+.+........+. ++|.+++||++
T Consensus 260 l~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~lr~v~~gG~~ 337 (562)
T PRK05677 260 LYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFS--ALKLTLSGGMA 337 (562)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChh--hceEEEEcCcc
Confidence 999999865 445566677666654 47899999999999999999999999999876533333334 89999999999
Q ss_pred CcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCC
Q 044926 318 PPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGS 396 (569)
Q Consensus 318 l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~ 396 (569)
+++.+.+.+. .+++++++.||+||++.++..+... .....++|.|.++. +++|+|+ ++..++.|
T Consensus 338 ~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g-- 402 (562)
T PRK05677 338 LQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDD-DGNELPLG-- 402 (562)
T ss_pred CCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECC-CCCCCCCC--
Confidence 9999999888 4699999999999998766543211 11234689999998 9999997 57788877
Q ss_pred ceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcc
Q 044926 397 TLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVN 476 (569)
Q Consensus 397 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~ 476 (569)
+.|||+++|+.++.||+++++.+...|..++||+|||+|++++||.+++.||.+|+|+.+|.+|+|.+||+.|.++++|.
T Consensus 403 ~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~ 482 (562)
T PRK05677 403 EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVL 482 (562)
T ss_pred CCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCcc
Confidence 89999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 477 EAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 477 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+++|++.+++..++.++++++..++.. .+.++++++++++++.+++|..++++++||+|++||++|++|++++.+.
T Consensus 483 ~~~v~g~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 483 QCAAIGVPDEKSGEAIKVFVVVKPGET--LTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKK 558 (562)
T ss_pred EEEEEeccCccCCceEEEEEEeCCCCC--CCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHh
Confidence 999999999888888889988776644 6788999999999999999999999999999999999999998866543
No 26
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.2e-68 Score=553.20 Aligned_cols=481 Identities=29% Similarity=0.447 Sum_probs=414.1
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
+|+.++|++++..+||++|+++.++.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
++++.+.+++.+++++++++.+|++............ ..++++
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-------------------------------------~~~~~~ 124 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-------------------------------------VKFAEL 124 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-------------------------------------ccHHHH
Confidence 9999999999999999999999998765443322100 001111
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMA 253 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~ 253 (569)
................+++++++|||||||.||+|.++|.++...+......++++.+|++++.+|++|.+++...+.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l 204 (483)
T PRK03640 125 MNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSV 204 (483)
T ss_pred hhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHH
Confidence 11111111111224567899999999999999999999999988777777778899999999999999999998888889
Q ss_pred HhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCee
Q 044926 254 AVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKV 333 (569)
Q Consensus 254 ~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i 333 (569)
..|+++++.+..++..+++.++++++|++.++|+++..+.+..... .... ++|.+++||+++++...+.+++.++++
T Consensus 205 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~--~lr~~~~~g~~~~~~~~~~~~~~~~~~ 281 (483)
T PRK03640 205 IYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPS--SFRCMLLGGGPAPKPLLEQCKEKGIPV 281 (483)
T ss_pred hcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCC--cceEEEEcCCCCCHHHHHHHHHhCCCe
Confidence 9999999998899999999999999999999999999998765433 2223 899999999999999999888789999
Q ss_pred eecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccccccc
Q 044926 334 SHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYL 413 (569)
Q Consensus 334 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 413 (569)
++.||+||++..+..... ........++|.|.+++ +++|.|+ +.+++.+ +.|||+++|+.++.||+
T Consensus 282 ~~~YG~tE~~~~~~~~~~---------~~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~ 347 (483)
T PRK03640 282 YQSYGMTETASQIVTLSP---------EDALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYL 347 (483)
T ss_pred eeeeccCcccccccccCc---------ccccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhc
Confidence 999999998754433221 11122345789999998 9999985 3566666 89999999999999999
Q ss_pred CCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeE
Q 044926 414 KDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPC 493 (569)
Q Consensus 414 ~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~ 493 (569)
++++.+...|. ++||+|||++++++||.+++.||.+|++|.+|.+|++.+||+.+.++++|.++++++.+++..++.++
T Consensus 348 ~~~~~~~~~~~-~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~ 426 (483)
T PRK03640 348 NREDATRETFQ-DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPV 426 (483)
T ss_pred CCHHHHHHHHh-cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceE
Confidence 99998888886 89999999999999999999999999999999999999999999999999999999998887777777
Q ss_pred EEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 494 AFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 494 ~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
++++.... .+.++++++++++++++++|..++++++||+|++||++|++|++++++
T Consensus 427 ~~~~~~~~----~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 427 AFVVKSGE----VTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEEEeCCC----CCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 87775432 677899999999999999999999999999999999999999999875
No 27
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=7.2e-68 Score=556.75 Aligned_cols=505 Identities=28% Similarity=0.386 Sum_probs=424.4
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
+..+.|+.++|+++++.+|+++|+++.++.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 17 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~ 96 (542)
T PRK06155 17 PPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGA 96 (542)
T ss_pred CccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCC
Confidence 44778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|+++.++.+++.++++++++++++++.+....+.+..... .....++.++.... . ..... ..
T Consensus 97 ~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~--------~~~~~---~~ 161 (542)
T PRK06155 97 IAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGD---LPLPAVWLLDAPAS-V--------SVPAG---WS 161 (542)
T ss_pred EEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccc---cCcceEEEecCccc-c--------ccccc---cc
Confidence 9999999999999999999999999999987766655433221 11234444443211 0 00000 00
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHH
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFP 249 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~ 249 (569)
..++.... .........++++++++|||||||.||+|.++|+++..........+++..++++++..|++|..++...
T Consensus 162 ~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~ 239 (542)
T PRK06155 162 TAPLPPLD--APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAF 239 (542)
T ss_pred hhhhcccC--CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHH
Confidence 00010000 0111123456899999999999999999999999998887777778889999999999999999999888
Q ss_pred HHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-h
Q 044926 250 WAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-S 328 (569)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~ 328 (569)
+.+++.|+++++.+.+++..+++.|+++++|++.++|+++..|.+.......... +++.++.+| +++.+.+.++ .
T Consensus 240 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~l~~~~~g~--~~~~~~~~~~~~ 315 (542)
T PRK06155 240 FQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAH--RVRVALGPG--VPAALHAAFRER 315 (542)
T ss_pred HHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccC--ceEEEEEcC--CCHHHHHHHHHH
Confidence 8889999999998889999999999999999999999999999987655544444 788777555 5677777776 6
Q ss_pred cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecC--
Q 044926 329 LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGG-- 406 (569)
Q Consensus 329 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~-- 406 (569)
+++++++.||+||++.++..+.. ......+|.+.++. +++|+|+ .+.+++.| +.|||+++|+
T Consensus 316 ~~~~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~~~~ 379 (542)
T PRK06155 316 FGVDLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRADEP 379 (542)
T ss_pred cCCCEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCCc
Confidence 79999999999999876553211 12335788888888 9999997 57888877 8999999998
Q ss_pred -cccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCC
Q 044926 407 -CIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPD 485 (569)
Q Consensus 407 -~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 485 (569)
.++.||+++++.+...|. ++||+|||+|++++||++++.||.+|+|+++|.+++|.+||++|.++|+|.+++|++.++
T Consensus 380 ~~~~~GY~~~~~~~~~~~~-~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~ 458 (542)
T PRK06155 380 FAFATGYFGMPEKTVEAWR-NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPS 458 (542)
T ss_pred cccchhhcCCHHHHHHhhc-CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecc
Confidence 699999999988888776 899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 486 EFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 486 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+..++.+.++++..++.. .+..+++++++++++.+++|..++++++||+|++||++|++|++++...
T Consensus 459 ~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 525 (542)
T PRK06155 459 ELGEDEVMAAVVLRDGTA--LEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVTA 525 (542)
T ss_pred cccCceEEEEEEECCCCC--CCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccCC
Confidence 877788888888876655 6789999999999999999999999999999999999999999877543
No 28
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-67 Score=554.67 Aligned_cols=519 Identities=34% Similarity=0.544 Sum_probs=446.4
Q ss_pred CCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcc
Q 044926 9 ANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAA 88 (569)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 88 (569)
|.+.+.|+.++|.++++.+|+++|+.+.++.+||+||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|
T Consensus 1 ~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G 80 (521)
T PRK06187 1 MQDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIG 80 (521)
T ss_pred CCcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccc
Q 044926 89 AVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFS 168 (569)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (569)
++++++++..+.+++.++++.++++.++++.+..+.+.+....... .+.++.+++.... .......
T Consensus 81 ~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----------~~~~~~~ 146 (521)
T PRK06187 81 AVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPT---VRTVIVEGDGPAA-----------PLAPEVG 146 (521)
T ss_pred eEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCC---ccEEEEecCcccc-----------ccccccc
Confidence 9999999999999999999999999999999887777666554432 3455555443211 0001134
Q ss_pred hhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH
Q 044926 169 TYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF 248 (569)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~ 248 (569)
.+.+++........ ......+++++++|||||||.||+|.++|+++..........++++.+|++++..|++|..++..
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 225 (521)
T PRK06187 147 EYEELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL 225 (521)
T ss_pred cHHHHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH
Confidence 55555544332222 22355678999999999999999999999999988888888889999999999999999999988
Q ss_pred HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh
Q 044926 249 PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES 328 (569)
Q Consensus 249 ~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~ 328 (569)
.+.++..|+++++.+..++..+++.++++++|.++++|+++..+.+........+. ++|.+++||+.++..+++.+.+
T Consensus 226 ~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~--~l~~v~~~Ge~l~~~~~~~~~~ 303 (521)
T PRK06187 226 PYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFS--SLRLVIYGGAALPPALLREFKE 303 (521)
T ss_pred HHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcc--hhhEEEEcCcCCCHHHHHHHHH
Confidence 77889999999998888999999999999999999999999999998766444555 9999999999999999999884
Q ss_pred -cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCc
Q 044926 329 -LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGC 407 (569)
Q Consensus 329 -~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 407 (569)
+++++++.||+||+++++..+........ ........|.|.++. .++|+|+ ++.+++.+.++.|||+++|+.
T Consensus 304 ~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~-----~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~ 376 (521)
T PRK06187 304 KFGIDLVQGYGMTETSPVVSVLPPEDQLPG-----QWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPW 376 (521)
T ss_pred HhCcchheeeccCccCcccccCCccccccc-----ccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcc
Confidence 59999999999999876665432211000 012346788899988 9999997 567777733489999999999
Q ss_pred ccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCC
Q 044926 408 IMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEF 487 (569)
Q Consensus 408 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~ 487 (569)
++.||+++++.+...|. ++||+|||+++++++|.+++.||.+|+++.+|.++++.+||+.|.++++|.+++|++.+++.
T Consensus 377 ~~~~y~~~~~~~~~~~~-~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~ 455 (521)
T PRK06187 377 LMQGYWNRPEATAETID-GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEK 455 (521)
T ss_pred hhhhhcCCHHHHHHHhh-CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCC
Confidence 99999999988888887 77999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 488 WGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 488 ~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
.++.++++++..++.. .+.++++++++++++.+++|..++++++||+|++||++|+.|+++|.+.
T Consensus 456 ~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 456 WGERPVAVVVLKPGAT--LDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred cCceEEEEEEECCCCC--CCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 8888999999877655 6788999999999999999999999999999999999999999999864
No 29
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-67 Score=554.86 Aligned_cols=536 Identities=54% Similarity=0.950 Sum_probs=438.0
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Q 044926 4 LKPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFA 83 (569)
Q Consensus 4 ~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 83 (569)
+.+-+...-++|+.++|++.++.+|+++|+++.+..+||+||.++++++|..|.+.|+++||+|+++++|+++++++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA 87 (545)
T PRK08162 8 LDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFG 87 (545)
T ss_pred cCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHH
Confidence 33444455678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCC
Q 044926 84 VPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISD 163 (569)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (569)
|+++|++++|++++.+.+++.++++.++++.++++.+..+.+.+....... ...+.+....... .. ..
T Consensus 88 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~-~~ 155 (545)
T PRK08162 88 VPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPG----PKPLVIDVDDPEY-------PG-GR 155 (545)
T ss_pred HHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCC----CceEEEecCcccc-------cc-CC
Confidence 999999999999999999999999999999999999887766655433321 2233333221100 00 00
Q ss_pred CcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhh
Q 044926 164 DQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHS 243 (569)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~ 243 (569)
......+++++....+......+.+.+++++++|||||||.||+|.++|+++...+......+.+..++++++.+|++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 235 (545)
T PRK08162 156 FIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHC 235 (545)
T ss_pred CcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhh
Confidence 00123455555443322222223345689999999999999999999999987766666666778888999999999999
Q ss_pred hhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHH
Q 044926 244 NGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVL 323 (569)
Q Consensus 244 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~ 323 (569)
.++...+...+.|++.++...+++..+++.++++++|++.++|.++..|.+........+. +.+.++++|+.+++...
T Consensus 236 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~ 313 (545)
T PRK08162 236 NGWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGID--HPVHAMVAGAAPPAAVI 313 (545)
T ss_pred hhHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCc--cceEEEECCCCCCHHHH
Confidence 9988777677788888888889999999999999999999999999999987544333333 56778899999999999
Q ss_pred HHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEE
Q 044926 324 LRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVL 403 (569)
Q Consensus 324 ~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 403 (569)
+.++++++++++.||+||+++.+..+.....+..++...........|.+.+....+.|+|++++.+++.++++.|||++
T Consensus 314 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v 393 (545)
T PRK08162 314 AKMEEIGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMF 393 (545)
T ss_pred HHHHHhCCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEE
Confidence 98887799999999999997766665444444333322222233456666665557889998788887764435799999
Q ss_pred ecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEec
Q 044926 404 RGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVAR 483 (569)
Q Consensus 404 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 483 (569)
+|+.++.||+++++.+...|. ++||+|||+|++++||.+++.||.+|+++.+|++|++.+||.+|.++|+|.+++|++.
T Consensus 394 ~g~~~~~gY~~~~~~~~~~~~-~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~ 472 (545)
T PRK08162 394 RGNIVMKGYLKNPKATEEAFA-GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAK 472 (545)
T ss_pred ecCcchhhhcCChhhhHHHhh-CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEee
Confidence 999999999999999998887 7899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 484 PDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 484 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
+++..++.+++++++.++.. .+.+++++++++.++.+++|..+++ .+||+|++||++|+.|++++.++...
T Consensus 473 ~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~~ 543 (545)
T PRK08162 473 PDPKWGEVPCAFVELKDGAS--ATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKAI 543 (545)
T ss_pred eccccCceEEEEEEeCCCCC--CCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhhh
Confidence 88877888999998877654 5788999999999999999998875 68999999999999999998887643
No 30
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-67 Score=554.49 Aligned_cols=515 Identities=28% Similarity=0.409 Sum_probs=426.5
Q ss_pred CCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcc
Q 044926 9 ANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAA 88 (569)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 88 (569)
+...++|+.++|.++++.+|+++|+++.++.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 2 MSRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred CcccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccc
Q 044926 89 AVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFS 168 (569)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (569)
++++++++..+.+++.++++.++++.++++.+..+........... ...++.+..... ..
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------------~~ 141 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPD---LTHVVAIGGARA-----------------GL 141 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCc---CceEEEeCCCcc-----------------cc
Confidence 9999999999999999999999999999998766555444332211 233444332110 13
Q ss_pred hhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc--CCCCCCCEEEEecCchhhhhh
Q 044926 169 TYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD--WSVPTQPVYLWTLPMFHSNGW 246 (569)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~--~~~~~~d~~~~~~pl~~~~g~ 246 (569)
.+.+++..............++++++++|||||||.||+|.++|.++...+...... .+....|+++...|++|..++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~ 221 (528)
T PRK07470 142 DYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGI 221 (528)
T ss_pred cHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHH
Confidence 344444332211111223456899999999999999999999999986554432222 256788999999999999998
Q ss_pred hHHHHHHHhCceEEEec--cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHH
Q 044926 247 CFPWAMAAVGGTNICIR--KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLL 324 (569)
Q Consensus 247 ~~~~~~~~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~ 324 (569)
...+ .++.|++.++++ .+++..+++.|+++++|++.++|+++..+++........+. ++|.+++||+++++....
T Consensus 222 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~~~~gG~~l~~~~~~ 298 (528)
T PRK07470 222 HQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHS--SLRYVIYAGAPMYRADQK 298 (528)
T ss_pred HHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCc--ceEEEEEcCCCCCHHHHH
Confidence 6544 567777777664 47899999999999999999999999999887654444454 999999999999999998
Q ss_pred HHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEE
Q 044926 325 RTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVL 403 (569)
Q Consensus 325 ~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 403 (569)
++. .++..+++.||+||+++.+..+..... ... ........++|.|.+++ .++++|+ ++.+++.| +.|||++
T Consensus 299 ~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~--~~~-~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i 371 (528)
T PRK07470 299 RALAKLGKVLVQYFGLGEVTGNITVLPPALH--DAE-DGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICV 371 (528)
T ss_pred HHHHHhCcHHHHhCCCcccCCceeecchhhc--ccc-ccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEE
Confidence 876 578899999999999876654321100 000 00122345789999998 9999997 67788877 8999999
Q ss_pred ecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEec
Q 044926 404 RGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVAR 483 (569)
Q Consensus 404 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 483 (569)
+|+.++.||+++++.+...|. ++||+|||+|++++||++++.||.+|+|+++|++++|.+||..|.++++|.+++|++.
T Consensus 372 ~~~~~~~gy~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~ 450 (528)
T PRK07470 372 IGPAVFAGYYNNPEANAKAFR-DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGV 450 (528)
T ss_pred eCCccchhhcCCHHHHHhhhc-CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEec
Confidence 999999999999998888776 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCC
Q 044926 484 PDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 484 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
+++..|+..+++++..++.. .+.++++++++++|+++++|..++++++||+|++||++|+.|++++++...
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 521 (528)
T PRK07470 451 PDPVWGEVGVAVCVARDGAP--VDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGL 521 (528)
T ss_pred cCcccCceeEEEEEECCCCC--CCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhccc
Confidence 99887888888888776644 678899999999999999999999999999999999999999999888764
No 31
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.7e-68 Score=570.56 Aligned_cols=516 Identities=18% Similarity=0.209 Sum_probs=394.2
Q ss_pred CchHHHHHHHHHHcCCCCeEEeC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 14 LTPLVFLERAATVYGDSPSIIYN----N-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
.|+.++|+++++.+||++|+.+. + +.+||+||.++++++|.+|.+.|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999842 1 35899999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCC
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDD 164 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (569)
+++|+++||+++.++.+++.+++++++++++|++.+....+........ ..++.++.++....... . .....+
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~--~~l~~vi~~~~~~~~~~---~--~~~~~~ 197 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNST--EYMKTVVSFGGVSREQK---E--EAETFG 197 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhccccc--ccceEEEEeCCCChHHh---h--hhhhcC
Confidence 9999999999999999999999999999999998765443322211110 01344555543210000 0 000001
Q ss_pred cccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC-----CCCCCCEEEEecC
Q 044926 165 QFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW-----SVPTQPVYLWTLP 239 (569)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~p 239 (569)
.....+++++..............++|+++|+|||||||.||||.+||+++...+......+ ++..+|++++.+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lP 277 (666)
T PLN02614 198 LVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLP 277 (666)
T ss_pred cEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEecc
Confidence 11245666554332211111224578999999999999999999999999988776554433 5788999999999
Q ss_pred chhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCC----C----------------
Q 044926 240 MFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP----D---------------- 299 (569)
Q Consensus 240 l~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~----~---------------- 299 (569)
++|.+++...+..+..|+++++.+ .++..+++.|++++||+++++|+++..+.+.... .
T Consensus 278 l~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~ 356 (666)
T PLN02614 278 LAHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKF 356 (666)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999876666677888877764 6899999999999999999999999987642100 0
Q ss_pred -----------CC-------------CCCcCCCceEEEeCCCCcHHHHHHHHhc-CCeeeecccccccccceeecccccc
Q 044926 300 -----------KK-------------PLKLAKPVHLVTAGAPPPAAVLLRTESL-GFKVSHGYGLTETGGIVVSCAWKRN 354 (569)
Q Consensus 300 -----------~~-------------~~~~~~l~~~~~~g~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~ 354 (569)
.. .+ .+++|.+++||+++++.+.+.++.+ +++++++||+||+++..+.... .
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-g~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~-~- 433 (666)
T PLN02614 357 GNMKKGQSHVEASPLCDKLVFNKVKQGL-GGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLP-D- 433 (666)
T ss_pred HHHHcCCCCcccchHHHHHHHHHHHHHh-CCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeecc-c-
Confidence 00 00 1489999999999998765544555 5899999999998754432211 0
Q ss_pred cccCcHHHHhhhhcccCcccccceeeEEeCCCC--CcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeec
Q 044926 355 WNLLPAAEKAKLKARQGVKTTALTEVDVLDPKS--GVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTG 432 (569)
Q Consensus 355 ~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~--~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TG 432 (569)
......++|.|.+++ +++|+|.++ +..++.| +.|||+|+||+++.|||++|+.+...|. +|||+||
T Consensus 434 --------~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TG 501 (666)
T PLN02614 434 --------ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLI-DGWLHTG 501 (666)
T ss_pred --------cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhc-cCCcccc
Confidence 011245799999998 999998433 3556655 8899999999999999999999999996 8999999
Q ss_pred ceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCC---------
Q 044926 433 DVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGS--------- 502 (569)
Q Consensus 433 D~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~--------- 502 (569)
|+|++|+||+|++.||.+|+|| .+|++|+|.+||++|.+||.|.+++|++..+. ..++++|++....
T Consensus 502 Dlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~~~~~~~~~~~~ 578 (666)
T PLN02614 502 DVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQQILERWAAENG 578 (666)
T ss_pred eEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCHHHHHHHHHhcC
Confidence 9999999999999999999999 57999999999999999999999999998642 3477887765321
Q ss_pred -CC--------CCCHHHHHHHH-----hccCCCCccccEEEEec-cc-----CCCCCCcccHHHHHHHHHhcC
Q 044926 503 -KS--------KPTEKEMIEYC-----RGRLPHYMVPKTVVFMD-EL-----PKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 503 -~~--------~~~~~~l~~~l-----~~~l~~~~~p~~~~~~~-~i-----P~t~~GKi~r~~l~~~~~~~~ 555 (569)
.. ....+.+.+.+ ++.|+.+.+++.|.++. ++ -+|+++|+.|..+.+.|++.-
T Consensus 579 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i 651 (666)
T PLN02614 579 VSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVI 651 (666)
T ss_pred CCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHH
Confidence 00 00112233333 35699999999998875 33 389999999999999888754
No 32
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.9e-67 Score=555.18 Aligned_cols=511 Identities=26% Similarity=0.388 Sum_probs=422.7
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYN--NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
...|+.++|.+++..+|+++|+++. ++.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 26 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 105 (546)
T PLN02330 26 DKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGG 105 (546)
T ss_pred CCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCc
Confidence 4578999999999999999999874 57899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|+++..+.+++.++++.++++++|+++.....+... ...++.+...... ....
T Consensus 106 ~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~---------~~~~i~~~~~~~~---------------~~~~ 161 (546)
T PLN02330 106 VFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL---------GLPVIVLGEEKIE---------------GAVN 161 (546)
T ss_pred EeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc---------CCcEEEecCCCCC---------------Cccc
Confidence 999999999999999999999999999998776654321 1223333322100 0133
Q ss_pred hhHhhhcCCCCc--ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC--CCCCCEEEEecCchhhhh
Q 044926 170 YESLVAKGDPEF--EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS--VPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 170 ~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~--~~~~d~~~~~~pl~~~~g 245 (569)
+.++++...... .......++++++++|||||||.||+|.++|+++..+.......++ ....++++...|++|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g 241 (546)
T PLN02330 162 WKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYG 241 (546)
T ss_pred HHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHH
Confidence 444444322111 1112245679999999999999999999999998776543221121 224567899999999998
Q ss_pred hhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHH
Q 044926 246 WCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLL 324 (569)
Q Consensus 246 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~ 324 (569)
+.. .+.++..|+++++.+.+++..+++.++++++|.+.++|+++..+.+........+...++|.+++||+++++.+++
T Consensus 242 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~ 321 (546)
T PLN02330 242 ITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLT 321 (546)
T ss_pred HHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHH
Confidence 764 5667788999888888999999999999999999999999999988654333333322578999999999999999
Q ss_pred HHH-hc-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEE
Q 044926 325 RTE-SL-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIV 402 (569)
Q Consensus 325 ~~~-~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 402 (569)
++. .+ ++++++.||+||++.+...+..... ........++|.|.+++ +++|+|++++..++.| +.|||+
T Consensus 322 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~ 392 (546)
T PLN02330 322 AFEAKFPGVQVQEAYGLTEHSCITLTHGDPEK------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELC 392 (546)
T ss_pred HHHHHcCCCeEEecccccccccceecCCCccc------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEE
Confidence 998 55 8999999999999765543321110 00111235789999998 9999998888888888 899999
Q ss_pred EecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEe
Q 044926 403 LRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVA 482 (569)
Q Consensus 403 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 482 (569)
++|+.++.||++++..+...++.++||+|||+|++++||++++.||.+|+|+.+|++|++.+||.+|.+++.|.+++|++
T Consensus 393 v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 472 (546)
T PLN02330 393 VRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVP 472 (546)
T ss_pred EecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEe
Confidence 99999999999999988888877899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 483 RPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 483 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
.+++..|+.++++|+..++.. .+.++++++++++++.++.|..++++++||+|++||++|++|++++.....+
T Consensus 473 ~~~~~~g~~~~a~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~~~ 545 (546)
T PLN02330 473 LPDEEAGEIPAACVVINPKAK--ESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSINKA 545 (546)
T ss_pred ccccccCceeEEEEEECCCCC--CCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhhcC
Confidence 999888888999998876654 5678999999999999999999999999999999999999999999877543
No 33
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-67 Score=557.72 Aligned_cols=521 Identities=27% Similarity=0.372 Sum_probs=427.1
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
.++|+.++|+++++.+|+++|+++.++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 30 ~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 109 (573)
T PRK05605 30 GDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVV 109 (573)
T ss_pred CcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccc-ccc---------CC--CC
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAV-SSQ---------SH--HP 159 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~--~~ 159 (569)
+|++|.++.+++.+++.+++++++|+++.....+.+...... ...++.+........ ... .. ..
T Consensus 110 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
T PRK05605 110 VEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTP----LETIVSVNMIAAMPLLQRLALRLPIPALRKARAA 185 (573)
T ss_pred eecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccc----cceeEeeecccccccccccccccccccccccccc
Confidence 999999999999999999999999998876665544432221 233433321110000 000 00 00
Q ss_pred CCCCCcccchhhHhhhcCCCCc---ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC-C-CCCCEE
Q 044926 160 NISDDQFFSTYESLVAKGDPEF---EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS-V-PTQPVY 234 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~-~-~~~d~~ 234 (569)
..........|.++........ ........+++++++|||||||.||+|.++|+++...+......+. + ...+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (573)
T PRK05605 186 LTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERV 265 (573)
T ss_pred cccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEE
Confidence 0000111234555444322110 1112245789999999999999999999999999876654433222 2 347899
Q ss_pred EEecCchhhhhhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEE
Q 044926 235 LWTLPMFHSNGWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVT 313 (569)
Q Consensus 235 ~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~ 313 (569)
++..|++|.+|+.. .+.+++.|+++++.+..++..+++.++++++|++.++|.++..|.+........+. ++|.+++
T Consensus 266 ~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~i~~ 343 (573)
T PRK05605 266 LAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLS--GVRNAFS 343 (573)
T ss_pred EEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCch--hccEEEE
Confidence 99999999998865 45567889998888888999999999999999999999999999987655555555 9999999
Q ss_pred eCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCC-Cccc
Q 044926 314 AGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKS-GVSA 391 (569)
Q Consensus 314 ~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~-~~~~ 391 (569)
||+.+++.+.+.+. .++.++++.||+||+++++..+.... ......+|.+.++. .++|+|+++ +..+
T Consensus 344 gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~d~~~~~~~~ 412 (573)
T PRK05605 344 GAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-EVRIVDPEDPDETM 412 (573)
T ss_pred CCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-EEEEEcCCCCCccC
Confidence 99999999999887 46899999999999987765443211 11234789999998 999999876 6777
Q ss_pred CCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHc
Q 044926 392 KRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYS 471 (569)
Q Consensus 392 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~ 471 (569)
+.+ +.|||+++|+.++.||++++..+...|. ++||+|||+|+++++|++++.||.+|+++.+|++|+|.+||+++.+
T Consensus 413 ~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~ 489 (573)
T PRK05605 413 PDG--EEGELLVRGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLRE 489 (573)
T ss_pred CCC--CeeEEEEecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHh
Confidence 776 8999999999999999999999988887 6799999999999999999999999999999999999999999999
Q ss_pred CCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHH
Q 044926 472 NPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 551 (569)
Q Consensus 472 ~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~ 551 (569)
++.|.+++|++.+++..++.+++++++.++.. .+.++|+++++++++.+++|..++++++||+|.+||++|++|++++
T Consensus 490 ~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~ 567 (573)
T PRK05605 490 HPGVEDAAVVGLPREDGSEEVVAAVVLEPGAA--LDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREEL 567 (573)
T ss_pred CcccceEEEEeeecccCCeEEEEEEEECCCCC--CCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHH
Confidence 99999999999998888888999998887654 6789999999999999999999999999999999999999999988
Q ss_pred Hhc
Q 044926 552 ENM 554 (569)
Q Consensus 552 ~~~ 554 (569)
.+.
T Consensus 568 ~~~ 570 (573)
T PRK05605 568 LEK 570 (573)
T ss_pred HHH
Confidence 764
No 34
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-67 Score=559.42 Aligned_cols=507 Identities=24% Similarity=0.369 Sum_probs=418.9
Q ss_pred CchH-HHHHHHHH-HcCCCCeEEeCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q 044926 14 LTPL-VFLERAAT-VYGDSPSIIYNN----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFA 87 (569)
Q Consensus 14 ~tl~-~~l~~~a~-~~p~~~al~~~~----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 87 (569)
+++. ++++++++ .+|+++|+.+.+ +.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3444 68888877 479999998753 68999999999999999999999999999999999999999999999999
Q ss_pred cceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCccc
Q 044926 88 AAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFF 167 (569)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (569)
|++++|+++.++.+++.++++.++++++|++......... ...+ ..+.++.++..... ....
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~-------------~~~~ 183 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLP---SLKHVLLVGEDVEE-------------GPGT 183 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCC---CceEEEEECCCcCC-------------CcCc
Confidence 9999999999999999999999999999998765443221 1111 12344444322110 0012
Q ss_pred chhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhh
Q 044926 168 STYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWC 247 (569)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~ 247 (569)
..+.+++....... ...+..++++++++|||||||.||+|.++|++++.........+++.++|++++..|++|.+|..
T Consensus 184 ~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~ 262 (570)
T PRK04319 184 LDFNALMEQASDEF-DIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTS 262 (570)
T ss_pred cCHHHHHhhcCCcC-CccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCch
Confidence 34555544332221 11234567999999999999999999999999998887777788899999999999999998875
Q ss_pred H-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHH
Q 044926 248 F-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLR 325 (569)
Q Consensus 248 ~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~ 325 (569)
. .+.+++.|+++++.. .+++..+++.|+++++|+++++|+++..+.+..........++++|.+++||+++++++.++
T Consensus 263 ~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~ 342 (570)
T PRK04319 263 YGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRW 342 (570)
T ss_pred HHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHH
Confidence 5 667788899888875 58999999999999999999999999999876533222233449999999999999999998
Q ss_pred HH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEe
Q 044926 326 TE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLR 404 (569)
Q Consensus 326 ~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 404 (569)
++ .++.++++.||+||+++.+...... ......++|.|.++. +++|+|+ ++..++.| +.|||+++
T Consensus 343 ~~~~~g~~i~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~ 408 (570)
T PRK04319 343 GMKVFGLPIHDNWWMTETGGIMIANYPA----------MDIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNLAIK 408 (570)
T ss_pred HHHHhCCCeEeceeecccCCEEEecCCC----------CCCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEEEEc
Confidence 88 5799999999999998765432111 011235789999998 9999997 66677776 89999999
Q ss_pred c--CcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEe
Q 044926 405 G--GCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVA 482 (569)
Q Consensus 405 ~--~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 482 (569)
| +.++.||+++++.+...|. ++||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||+.|.++|.|.+++|++
T Consensus 409 ~~~~~~~~GY~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g 487 (570)
T PRK04319 409 KGWPSMMRGIWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIG 487 (570)
T ss_pred CCCChHHhHhcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceec
Confidence 7 8999999999999988888 899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceeEEEEEecCCCCC-CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 483 RPDEFWGETPCAFVSLKEGSKS-KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 483 ~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
.+++..|+.++++++..++... +...++++++++++++.|++|..++++++||+|++||++|+.|+++..+.
T Consensus 488 ~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 560 (570)
T PRK04319 488 KPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELGL 560 (570)
T ss_pred ccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhCC
Confidence 9998889999999998775431 12236899999999999999999999999999999999999999987554
No 35
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-67 Score=554.95 Aligned_cols=515 Identities=21% Similarity=0.246 Sum_probs=407.0
Q ss_pred CCCCCCCCCCchHHHHHHHHHHcCCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 5 KPSPANSTPLTPLVFLERAATVYGDSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 5 ~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
+.-++..-+.|+.+.|.++|+++|+++|+++.+ +.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|
T Consensus 5 ~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~l 84 (540)
T PRK05857 5 KFQAMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVL 84 (540)
T ss_pred cccccccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHH
Confidence 445677788899999999999999999998643 689999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCC
Q 044926 83 AVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNIS 162 (569)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (569)
||+++|++++|+++.++.+++.++++.++++++|+++.............. ...++.++......
T Consensus 85 A~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----------- 149 (540)
T PRK05857 85 ACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALH----SIPVIAVDIAAVTR----------- 149 (540)
T ss_pred HHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccccccc----ccceeEeecccccc-----------
Confidence 999999999999999999999999999999999998765322111111000 11222222111000
Q ss_pred CCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhh----ccCCCCCCCEEEEec
Q 044926 163 DDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTL----SDWSVPTQPVYLWTL 238 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~----~~~~~~~~d~~~~~~ 238 (569)
.+......... ........+++++++|||||||.||+|.++|+++..+..... ..+....++++++.+
T Consensus 150 ------~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (540)
T PRK05857 150 ------ESEHSLDAASL--AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPL 221 (540)
T ss_pred ------ccccccccccc--ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecC
Confidence 00000000000 001224567999999999999999999999999976654322 123456778999999
Q ss_pred CchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCC
Q 044926 239 PMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPP 318 (569)
Q Consensus 239 pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l 318 (569)
|++|..++...+.+++.|+++++ ...++..+++.|+++++|.++++|.++..+.+........+. ++|.+++||+++
T Consensus 222 p~~h~~~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~--~lr~~~~gG~~~ 298 (540)
T PRK05857 222 PATHIGGLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVP--SLRLVGYGGSRA 298 (540)
T ss_pred CccccchHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCc--cceEEEEcCccC
Confidence 99999999888888888988765 556889999999999999999999999999887654444555 999999999999
Q ss_pred cHHHHHHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCC---CC
Q 044926 319 PAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKR---DG 395 (569)
Q Consensus 319 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~---~~ 395 (569)
+....+.+..+++++++.||+||++.....+..... ........++|.+.+++ +++|+|++...+.+. ..
T Consensus 299 ~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~ 371 (540)
T PRK05857 299 IAADVRFIEATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPS 371 (540)
T ss_pred CchhHHHHHHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCC
Confidence 888876666779999999999999754443221110 00011235789999998 999999854433332 12
Q ss_pred CceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCc
Q 044926 396 STLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAV 475 (569)
Q Consensus 396 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i 475 (569)
++.|||+++|++++.||+++++.+...|. +|||+|||+|+++++|++++.||.+|+||++|.+|+|.+||.+|..||+|
T Consensus 372 ~~~Gel~v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V 450 (540)
T PRK05857 372 ASFGTLWIKSPANMLGYWNNPERTAEVLI-DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGV 450 (540)
T ss_pred CCcceEEEeCcchhhhhhCCccchhhhcC-CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCe
Confidence 37899999999999999999999888887 89999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEecCCCCCCceeEEEEEecCCCCCCCCH----HHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHH
Q 044926 476 NEAAVVARPDEFWGETPCAFVSLKEGSKSKPTE----KEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 551 (569)
Q Consensus 476 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~----~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~ 551 (569)
.+++|++.++...++.++++++..+.... ... +.+.+.++++++.+++|..++++++||+|++||++|++|++.+
T Consensus 451 ~~~~v~~~~~~~~~~~~~~~vv~~~~~~~-~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~ 529 (540)
T PRK05857 451 REAACYEIPDEEFGALVGLAVVASAELDE-SAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAA 529 (540)
T ss_pred eEEEEEecCccccccceEEEEEeCCCCCh-hhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhh
Confidence 99999999988777777777776543221 112 3445566778999999999999999999999999999999988
Q ss_pred Hhc
Q 044926 552 ENM 554 (569)
Q Consensus 552 ~~~ 554 (569)
...
T Consensus 530 ~~~ 532 (540)
T PRK05857 530 TAD 532 (540)
T ss_pred hhc
Confidence 753
No 36
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=4e-67 Score=554.50 Aligned_cols=543 Identities=51% Similarity=0.902 Sum_probs=429.5
Q ss_pred CCCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q 044926 7 SPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPF 86 (569)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 86 (569)
.++...++++..+|.+.+..+|+++|+++.++.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~ 92 (567)
T PLN02479 13 NAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPM 92 (567)
T ss_pred ccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHh
Confidence 34455678899999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred ccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCC----CCCCCCEEEEeCCCcccccccCCCCCCC
Q 044926 87 AAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPP----DLKPPPLVLISDDDDAAVSSQSHHPNIS 162 (569)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (569)
+|++++|+++.++.+++.++++.++++.+|+++...+...+....... ....+.++.++.......... ...
T Consensus 93 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~- 168 (567)
T PLN02479 93 AGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQ---YAL- 168 (567)
T ss_pred CCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccc---ccc-
Confidence 999999999999999999999999999999998776655444332111 001223444433211000000 000
Q ss_pred CCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchh
Q 044926 163 DDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFH 242 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~ 242 (569)
......+.+++....+..........+++++++|||||||.||+|.++|++++..+......+++..++++++..|++|
T Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h 247 (567)
T PLN02479 169 -GKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFH 247 (567)
T ss_pred -ccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhh
Confidence 0112345665554332221112233457788999999999999999999998776665556678889999999999999
Q ss_pred hhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHH
Q 044926 243 SNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAV 322 (569)
Q Consensus 243 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~ 322 (569)
.+++...+...+.++..+++..+++..+++.++++++|++.++|.++..|.+....... ..+.+++.++++|+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~-~~~~~l~~~~~~G~~~~~~~ 326 (567)
T PLN02479 248 CNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETI-LPLPRVVHVMTAGAAPPPSV 326 (567)
T ss_pred hhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhccc-ccccceeEEEEcCCCCCHHH
Confidence 99987766555556666667788999999999999999999999999999876432221 12338899999999999999
Q ss_pred HHHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEE
Q 044926 323 LLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIV 402 (569)
Q Consensus 323 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 402 (569)
.+++++.++++++.||+||+++.+..+.....|...+...........|.+.++...++|+|++++.+++.++++.|||+
T Consensus 327 ~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~ 406 (567)
T PLN02479 327 LFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIV 406 (567)
T ss_pred HHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEE
Confidence 99988778999999999999765554432222222211111122235677777764488999878887776544689999
Q ss_pred EecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEe
Q 044926 403 LRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVA 482 (569)
Q Consensus 403 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 482 (569)
++|++++.||+++++.+...|. ++||+|||+|+++++|++++.||.+|+|+.+|++|++.+||.+|.++|.|.+++|++
T Consensus 407 v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~ 485 (567)
T PLN02479 407 MRGNMVMKGYLKNPKANEEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVA 485 (567)
T ss_pred EeccchhhhhhcCcccccchhc-CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEe
Confidence 9999999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceeEEEEEecCCCCC---CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 483 RPDEFWGETPCAFVSLKEGSKS---KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 483 ~~~~~~~~~~~~~v~~~~~~~~---~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
.+++..++.+++++++.++... ....++++++++++++.++.|+.+++ .+||+|++||++|+.|++.+...+.+
T Consensus 486 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~~~~ 562 (567)
T PLN02479 486 RPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEMGPV 562 (567)
T ss_pred ccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhhCCc
Confidence 9888778889999988765321 13457899999999999999998776 78999999999999999988875543
No 37
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-67 Score=562.59 Aligned_cols=518 Identities=23% Similarity=0.277 Sum_probs=411.3
Q ss_pred hHHHHHHHHHHcCCCCeEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 16 PLVFLERAATVYGDSPSIIYN------NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 16 l~~~l~~~a~~~p~~~al~~~------~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
..++|++++..+|+++|+++. .+.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 377888888889999999872 36899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEcccc---------HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCC
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHS---------RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPN 160 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (569)
+++|++|.++.+++.+++++++++++|+++.. .+.+.++....... ...++++....... .
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vi~~~~~~~~~--------~ 204 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHK--PRHVLLVDRGLAPM--------A 204 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCC--CCEEEEEeCCCCCc--------C
Confidence 99999999999999999999999999997642 23344443322111 34555554321100 0
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHH-hhhhccCCCCCCCEEEEecC
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVA-VNTLSDWSVPTQPVYLWTLP 239 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~-~~~~~~~~~~~~d~~~~~~p 239 (569)
... .....+.++...............++++++++|||||||.||||.++|.+++... ......+++.++|++++..|
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 283 (629)
T PRK10524 205 RVA-GRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASD 283 (629)
T ss_pred ccc-CCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCC
Confidence 000 0012344444332211111122456899999999999999999999999875443 33444567889999999999
Q ss_pred chhhhhhhH-HHHHHHhCceEEEec----cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEe
Q 044926 240 MFHSNGWCF-PWAMAAVGGTNICIR----KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTA 314 (569)
Q Consensus 240 l~~~~g~~~-~~~~~~~g~~~~~~~----~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~ 314 (569)
+.|..+..+ .+.+++.|+++++.+ ..++..+++.++++++|++.++|+++..+.+..........+.++|.+++|
T Consensus 284 ~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~ 363 (629)
T PRK10524 284 IGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLA 363 (629)
T ss_pred CCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEe
Confidence 999888654 667788899988875 357899999999999999999999999988764322222233499999999
Q ss_pred CCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCC
Q 044926 315 GAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKR 393 (569)
Q Consensus 315 g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~ 393 (569)
|+++++++.+++. .+++++++.||+||++..+....... ........++|.|.++. +++|+|+++|.+++.
T Consensus 364 Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~ 435 (629)
T PRK10524 364 GEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV-------EDRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGP 435 (629)
T ss_pred CCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc-------ccCcCCCCCcccCcCCc-eEEEEeCCCCCCCCC
Confidence 9999999999887 57999999999999975443321110 00112235789999998 999999878888887
Q ss_pred CCCceeEEEEecC---cccccccCCcccccccc---CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHH
Q 044926 394 DGSTLGEIVLRGG---CIMLGYLKDPIGTRKCM---TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVES 467 (569)
Q Consensus 394 ~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~ 467 (569)
| +.|||+++|| .++.||+++++.....+ ..++||+|||+|++++||++++.||.||+||++|++|+|.+||.
T Consensus 436 g--~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~ 513 (629)
T PRK10524 436 N--EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEE 513 (629)
T ss_pred C--CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHH
Confidence 7 8999999998 57889999887655432 13689999999999999999999999999999999999999999
Q ss_pred HHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCC------CCHHHHHHHHhccCCCCccccEEEEecccCCCCCCc
Q 044926 468 VLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSK------PTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGK 541 (569)
Q Consensus 468 ~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~------~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GK 541 (569)
+|.++|+|.+++|++.+++..|+.++++|++.++.... ...++|+++++++++.+++|..++++++||+|++||
T Consensus 514 ~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGK 593 (629)
T PRK10524 514 SISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGK 593 (629)
T ss_pred HHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcc
Confidence 99999999999999999988889999999987653210 134689999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhc
Q 044926 542 IQKFVLREIAENM 554 (569)
Q Consensus 542 i~r~~l~~~~~~~ 554 (569)
++|+.|++.+.+.
T Consensus 594 i~R~~L~~~~~~~ 606 (629)
T PRK10524 594 LLRRAIQAIAEGR 606 (629)
T ss_pred hHHHHHHHHHcCC
Confidence 9999999987644
No 38
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=4.2e-67 Score=550.48 Aligned_cols=499 Identities=24% Similarity=0.353 Sum_probs=416.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
|...|+.++|+++++.+|+++|+++.++.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 20 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 20 WQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred ccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccHH-----HHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCc
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA-----LVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQ 165 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (569)
++++++..+.+++.++++.+++++++++..... ........... ...++.......
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------------- 160 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPT---LRNIIVAGQTRV---------------- 160 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCc---ceEEEEecCCCC----------------
Confidence 999999999999999999999999999865421 11111111111 222333221100
Q ss_pred ccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhh
Q 044926 166 FFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g 245 (569)
.......++..... .......++++++++|||||||.||+|.++|.++..........+.++.+|++++.+|++|.++
T Consensus 161 -~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~ 238 (527)
T TIGR02275 161 -EAELFLWLESPAEP-VKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYP 238 (527)
T ss_pred -cchhhHHhhCcCcc-ccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhh
Confidence 00111111111111 1112345789999999999999999999999999988888777888999999999999999998
Q ss_pred hhH--HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHH
Q 044926 246 WCF--PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVL 323 (569)
Q Consensus 246 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~ 323 (569)
+.. .+.++..|+++++.+.+++..+++.++++++|++.++|.++..+.+........+. ++|.+++||+++++.+.
T Consensus 239 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~lr~~~~gG~~l~~~~~ 316 (527)
T TIGR02275 239 LSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLS--SLKLLQVGGAKFSEAAA 316 (527)
T ss_pred hhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCcc--ceEEEEEcCCCCCHHHH
Confidence 864 57778889998888888999999999999999999999999999887765555555 99999999999999999
Q ss_pred HHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEE
Q 044926 324 LRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIV 402 (569)
Q Consensus 324 ~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~ 402 (569)
+++. .+++++++.||+||++....... . .......++|.|.++...++|+|+ ++..++.| +.|||+
T Consensus 317 ~~~~~~~g~~~~~~YG~tE~~~~~~~~~-~---------~~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~~g--~~Gei~ 383 (527)
T TIGR02275 317 RRVPAVFGCQLQQVFGMAEGLVNYTRLD-D---------PAEIIFTTQGRPMSPDDEVRVVDD-HGNPVAPG--ETGMLL 383 (527)
T ss_pred HHHHHHhCCeEEeeeccCccCccccCCC-C---------ccccccccCCCCCCCCceEEEECC-CCCCCCCC--CceEEE
Confidence 9987 57999999999999643322111 0 011123467888864448999997 67777777 899999
Q ss_pred EecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEe
Q 044926 403 LRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVA 482 (569)
Q Consensus 403 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 482 (569)
++|++++.||+++++.+...+..++||+|||+|++++||++++.||.+|+|+.+|++|+|.+||++|.++|+|.+++|++
T Consensus 384 v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 463 (527)
T TIGR02275 384 TRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVS 463 (527)
T ss_pred ecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEe
Confidence 99999999999999999888888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc-CCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 483 RPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR-LPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 483 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
.+++..++.++++|+..++. .+.++|+++++++ ++.+++|..++++++||+|++||++|+.|+
T Consensus 464 ~~~~~~~~~~~a~vv~~~~~---~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 464 MPDELLGEKSCAFIVVRDPA---LKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred cCCcccccEEEEEEEECCCC---CCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 99988888899998876553 5778999999985 999999999999999999999999999874
No 39
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-66 Score=548.26 Aligned_cols=525 Identities=28% Similarity=0.478 Sum_probs=430.7
Q ss_pred CCCCCCCchHHHHHHHHHHcCCCCeEEe--CC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Q 044926 8 PANSTPLTPLVFLERAATVYGDSPSIIY--NN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFA 83 (569)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~al~~--~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 83 (569)
-+...|+|+.++|+++|+.+|++++++. .+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 4 LMQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred hhhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 3566789999999999999999999984 23 6899999999999999999999999999999999999999999999
Q ss_pred hhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCC
Q 044926 84 VPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISD 163 (569)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (569)
|+++|++++|++|..+.+++.++++.++++.++++.+..+.+.+....... ...++.+.+..... . ..
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~-~~ 151 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPS---VERYVVLTDAAHMP--------Q-TT 151 (542)
T ss_pred HHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCC---ccEEEEeccccccc--------c-cC
Confidence 999999999999999999999999999999999998887777665543321 34444443321100 0 00
Q ss_pred CcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHH--HhhhhccCCCCCCCEEEEecCch
Q 044926 164 DQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIV--AVNTLSDWSVPTQPVYLWTLPMF 241 (569)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~--~~~~~~~~~~~~~d~~~~~~pl~ 241 (569)
......+.+++........ .....++++++++|||||||.||+|.+||++++.. .......+++..+|+++...|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 230 (542)
T PRK06018 152 LKNAVAYEEWIAEADGDFA-WKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLF 230 (542)
T ss_pred ccccccHHHHhccCCcccC-cccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHH
Confidence 0012345555544332211 12345678999999999999999999999975322 22334456788999999999999
Q ss_pred hhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcH
Q 044926 242 HSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPA 320 (569)
Q Consensus 242 ~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~ 320 (569)
|.+++...+.++..|+++++.. .+++..+++.++++++|++.++|+++..+.+.......+++ ++|.++++|+++++
T Consensus 231 h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~lr~~~~~G~~l~~ 308 (542)
T PRK06018 231 HANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLP--HLKMVVCGGSAMPR 308 (542)
T ss_pred HHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcc--cceEEEEcCCCCCH
Confidence 9999887778888998887764 57899999999999999999999999999887655444444 89999999999999
Q ss_pred HHHHHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeE
Q 044926 321 AVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGE 400 (569)
Q Consensus 321 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 400 (569)
.+.++++++++++++.||+||++.++..+.....+..............+|.|.+++ +++|+|+ ++..++.+++..||
T Consensus 309 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Ge 386 (542)
T PRK06018 309 SMIKAFEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGR 386 (542)
T ss_pred HHHHHHHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeE
Confidence 999999888999999999999987766554333322222222222235689899888 9999997 67777765446899
Q ss_pred EEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEE
Q 044926 401 IVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAV 480 (569)
Q Consensus 401 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 480 (569)
|+++|++++.||++.. ...+..++||+|||+++++++|++++.||.+|+|+.+|.++++.+||..+.++|+|.+++|
T Consensus 387 l~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v 463 (542)
T PRK06018 387 LKVRGPAVAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAV 463 (542)
T ss_pred EEEecCCcchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEE
Confidence 9999999999999842 2334458999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 481 VARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 481 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
++.+++.+++.+.++|+..++.. .+.++++++++++++.+++|..++++++||+|++||++|++|+++|.+.
T Consensus 464 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 535 (542)
T PRK06018 464 IGVYHPKWDERPLLIVQLKPGET--ATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDY 535 (542)
T ss_pred EeccCCCcCceeEEEEEeCCCCC--CCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhcc
Confidence 99999888888888888877654 6778999999999999999999999999999999999999999999874
No 40
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.7e-67 Score=550.07 Aligned_cols=512 Identities=30% Similarity=0.433 Sum_probs=434.5
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
.....|+.++|.++++.+|+++|+++.++.+||+||.+++.++|..|.+.|+++||+|+++++|+.+++++++||+++|+
T Consensus 7 ~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~ 86 (523)
T PRK08316 7 RARRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGA 86 (523)
T ss_pred cccCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|+++..+.+++.++++.+++++++++.+....+.+....... ..+........ .........
T Consensus 87 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~~~ 151 (523)
T PRK08316 87 VHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPV----DTLILSLVLGG-----------REAPGGWLD 151 (523)
T ss_pred EEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCc----cceeeeecccc-----------cccccchhh
Confidence 999999999999999999999999999998877766554433221 11111111000 000011234
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHH
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFP 249 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~ 249 (569)
+.++....... ........+++++++|||||||.||+|.++|++++.........+++..+|++++.+|++|..++...
T Consensus 152 ~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~ 230 (523)
T PRK08316 152 FADWAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVF 230 (523)
T ss_pred HHHHHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHH
Confidence 44444332221 12233567899999999999999999999999999888877778889999999999999999998664
Q ss_pred -HHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh
Q 044926 250 -WAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES 328 (569)
Q Consensus 250 -~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~ 328 (569)
+..+..|+++++.+..++..+++.++++++|++.++|.++..+.+........+. ++|.+++||+.++..+.+.+++
T Consensus 231 ~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~l~~~~~gg~~~~~~~~~~~~~ 308 (523)
T PRK08316 231 LGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLS--SLRKGYYGASIMPVEVLKELRE 308 (523)
T ss_pred HHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcc--cceEEEEcCCcCCHHHHHHHHH
Confidence 4457789999888888999999999999999999999999999987655544555 9999999999999999999884
Q ss_pred -c-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecC
Q 044926 329 -L-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGG 406 (569)
Q Consensus 329 -~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 406 (569)
+ ++++++.||+||++.++..+... .......++|.+.++. +++|+|+ ++..++.| +.|||+++|+
T Consensus 309 ~~~~~~~~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~ 375 (523)
T PRK08316 309 RLPGLRFYNCYGQTEIAPLATVLGPE---------EHLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSP 375 (523)
T ss_pred HcCCCceeeeecccccCccccccCcc---------ccccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECC
Confidence 4 78999999999998766553211 1112345789999998 9999996 67888877 8999999999
Q ss_pred cccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCC
Q 044926 407 CIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDE 486 (569)
Q Consensus 407 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~ 486 (569)
+++.||+++++.+...|. ++||+|||+|++++||.+++.||.+|+|+.+|++|+|.+||+.|.++++|.+++|++.+++
T Consensus 376 ~~~~~y~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~ 454 (523)
T PRK08316 376 QLMLGYWDDPEKTAEAFR-GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDP 454 (523)
T ss_pred chhhhhcCCHHHHHHHhh-CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCc
Confidence 999999999998888887 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 487 FWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 487 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
..++.++++++..++.. ...+++.++++++++.+++|..+++++++|+|++||++|++|+++|.+..
T Consensus 455 ~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 455 KWIEAVTAVVVPKAGAT--VTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred ccCCeEEEEEEECCCCC--CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 88888999999877654 67789999999999999999999999999999999999999999998754
No 41
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-67 Score=547.41 Aligned_cols=484 Identities=20% Similarity=0.326 Sum_probs=411.6
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
|++.++|.++++.+|+++|+.+.++.+||.||.++++++|++|.+.| .+|++|+|+++|+++++++++||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~-~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKE-SKNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 67899999999999999999999999999999999999999999988 48999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++.++.+++.++++.++++.+|++......+... ...++.+.. +.+.
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~---------~~~~~~~~~-----------------------~~~~ 127 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPDE---------EGRVIEIDE-----------------------WKRM 127 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhhc---------cceEEEehh-----------------------hhhh
Confidence 99999999999999999999999987654332210 112222211 1111
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMA 253 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~ 253 (569)
+....... .......+++++++|||||||.||+|.++|+++..+.......+++..+|+++...|++|..++...+.++
T Consensus 128 ~~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l 206 (487)
T PRK07638 128 IEKYLPTY-APIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTL 206 (487)
T ss_pred hhhccccc-cccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHH
Confidence 11111110 01113346789999999999999999999999998888888888899999999999999998877778889
Q ss_pred HhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-c-CC
Q 044926 254 AVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES-L-GF 331 (569)
Q Consensus 254 ~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~-~-~~ 331 (569)
+.|+++++.+.+++..+++.++++++|++.++|+++..+.+... ... +.+.++++|+.++....+++.+ + ++
T Consensus 207 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~--~~~~~~~~G~~l~~~~~~~~~~~~~~~ 280 (487)
T PRK07638 207 YVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIE--NKMKIISSGAKWEAEAKEKIKNIFPYA 280 (487)
T ss_pred ccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCC--ceeEEEEcCCCCCHHHHHHHHHHcCCC
Confidence 99999999888999999999999999999999999999987622 122 5667788999999999998884 4 78
Q ss_pred eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccccc
Q 044926 332 KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLG 411 (569)
Q Consensus 332 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 411 (569)
++++.||+||++.++..+... ......++|.|.++. .++|+|+ +|.+++.| +.|||+++|+.++.|
T Consensus 281 ~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~Gel~v~~~~~~~g 346 (487)
T PRK07638 281 KLYEFYGASELSFVTALVDEE----------SERRPNSVGRPFHNV-QVRICNE-AGEEVQKG--EIGTVYVKSPQFFMG 346 (487)
T ss_pred eEEEEecCCccCceEEecccc----------cCCCCCCCCcccCCc-EEEEECC-CCCCCCCC--CCeEEEEecccceee
Confidence 999999999998765543211 122345789999998 9999997 67888877 899999999999999
Q ss_pred ccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCce
Q 044926 412 YLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGET 491 (569)
Q Consensus 412 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~ 491 (569)
|++++..+...+. ++||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..|+.
T Consensus 347 y~~~~~~~~~~~~-~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 425 (487)
T PRK07638 347 YIIGGVLARELNA-DGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEK 425 (487)
T ss_pred ecCCHHHHhhhcc-CCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCe
Confidence 9999877665554 899999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCCC
Q 044926 492 PCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSSS 558 (569)
Q Consensus 492 ~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~ 558 (569)
++++++. . ...+++++++++.++.+++|..++++++||+|++||++|++|++++.+.+..+
T Consensus 426 ~~~~v~~----~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~ 486 (487)
T PRK07638 426 PVAIIKG----S--ATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQEKIY 486 (487)
T ss_pred eEEEEEC----C--CCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcccccc
Confidence 8888763 1 56789999999999999999999999999999999999999999999887653
No 42
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1e-67 Score=558.59 Aligned_cols=511 Identities=22% Similarity=0.255 Sum_probs=398.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCe----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHH
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNI----------TYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYEL 80 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~----------~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~ 80 (569)
...+|+.++|.+.++.+|+++|+++.+. .+||+||.++++++|.+|.+.|+++||+|+++++|+++++++
T Consensus 3 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 3 ASMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 4567899999999999999999998654 899999999999999999999999999999999999999999
Q ss_pred HHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCC
Q 044926 81 HFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPN 160 (569)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (569)
++||+++|++++|++|.++.+++.+++++++++++|++.+.. +.......... ....++.++.....
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~-~~~~~i~~~~~~~~---------- 149 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH--LARRLFGWGKP-SVRRLVTVGGRLLW---------- 149 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH--HHHHHhccCcc-chhheecccccccc----------
Confidence 999999999999999999999999999999999999975211 11111111000 02223322211000
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCc
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl 240 (569)
....+.++...............++++++++|||||||.||+|.++|+++...+......+++.++|+.++..|+
T Consensus 150 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl 224 (552)
T PRK09274 150 -----GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPL 224 (552)
T ss_pred -----CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCH
Confidence 012233333111111111122456899999999999999999999999999888888888899999999999999
Q ss_pred hhhhhhhHHHHHHHhCceEEEec-------cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEE
Q 044926 241 FHSNGWCFPWAMAAVGGTNICIR-------KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVT 313 (569)
Q Consensus 241 ~~~~g~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~ 313 (569)
+|.+++ ..|++.++.+ .+++..+++.|+++++|+++++|+++..|.+.......++. ++|.+++
T Consensus 225 ~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~--~lr~~~~ 295 (552)
T PRK09274 225 FALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLP--SLRRVIS 295 (552)
T ss_pred HHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCc--hhhEEEe
Confidence 876442 4577766643 36789999999999999999999999999987654444555 9999999
Q ss_pred eCCCCcHHHHHHHHh-c--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCC----
Q 044926 314 AGAPPPAAVLLRTES-L--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPK---- 386 (569)
Q Consensus 314 ~g~~l~~~~~~~~~~-~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~---- 386 (569)
||+++++.+.+++++ + ++++++.||+||+++++....... ..............++|.|.+++ +++|+|+.
T Consensus 296 gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~ 373 (552)
T PRK09274 296 AGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREI-LFATRAATDNGAGICVGRPVDGV-EVRIIAISDAPI 373 (552)
T ss_pred cCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhh-hccccccccCCCCcccCccCCCc-eEEEEecccccc
Confidence 999999999999984 5 579999999999987654322110 00000000011123689999998 99999863
Q ss_pred ----CCcccCCCCCceeEEEEecCcccccccCCccccccccC--CCC--eeeecceEEEecCCcEEEeccCCCeEEeCce
Q 044926 387 ----SGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMT--DDG--WFYTGDVGVMHSDGYLEIKDRSKDVIISGGE 458 (569)
Q Consensus 387 ----~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~~--~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~ 458 (569)
++..++.| +.|||+++|++++.||+++++.+...+. .++ ||+|||+|++++||++++.||.+|+|+++|+
T Consensus 374 ~~~~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~ 451 (552)
T PRK09274 374 PEWDDALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGG 451 (552)
T ss_pred ccccccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCE
Confidence 35566666 8999999999999999999988877652 355 9999999999999999999999999999999
Q ss_pred eeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCC---CCccccEEEEecccC
Q 044926 459 NLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLP---HYMVPKTVVFMDELP 535 (569)
Q Consensus 459 ~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~---~~~~p~~~~~~~~iP 535 (569)
+|+|.+||++|.+||+|.+++|++.+++. ++.++++|++.++.. ...+++.+.+++.+. ..+.|..++++++||
T Consensus 452 ~v~p~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP 528 (552)
T PRK09274 452 TLYTIPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGVA--CSKSALYQELRALAAAHPHTAGIERFLIHPSFP 528 (552)
T ss_pred EECcHHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCccc--cchHHHhhhhHHHHHhcCCCcceeEEeccCCCC
Confidence 99999999999999999999999998764 567888888877654 445556666655544 445778899999999
Q ss_pred CC--CCCcccHHHHHHHHHhcC
Q 044926 536 KT--STGKIQKFVLREIAENMG 555 (569)
Q Consensus 536 ~t--~~GKi~r~~l~~~~~~~~ 555 (569)
+| ++||++|++|++++.+..
T Consensus 529 ~t~~~~GKi~r~~L~~~~~~~~ 550 (552)
T PRK09274 529 VDIRHNAKIFREKLAVWAAKQL 550 (552)
T ss_pred ccccccccccHHHHHHHHHHhh
Confidence 99 799999999999887654
No 43
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.3e-66 Score=549.67 Aligned_cols=515 Identities=26% Similarity=0.392 Sum_probs=428.4
Q ss_pred CCCCCCCCchHHHHHHHHHHcCCCCeEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q 044926 7 SPANSTPLTPLVFLERAATVYGDSPSIIYNN-ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVP 85 (569)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~-~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 85 (569)
.+..|.+.|+.++|+++++.+|+++|+++.+ +.+||+||.++++++|++|++.|+++||+|+++++|+++++++++||+
T Consensus 16 ~~~~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~ 95 (547)
T PRK06087 16 QQGYWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACL 95 (547)
T ss_pred hcCCCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3446788899999999999999999999875 799999999999999999999999999999999999999999999999
Q ss_pred hccceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc-----HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCC
Q 044926 86 FAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS-----RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPN 160 (569)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (569)
++|++++|++|.++.+++.++++.+++++++++... .+.+......... ...++.++......
T Consensus 96 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------- 163 (547)
T PRK06087 96 KVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQ---LQQIVGVDKLAPAT--------- 163 (547)
T ss_pred HcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCC---CcEEEEeCCcCCCc---------
Confidence 999999999999999999999999999999997642 2333333332221 23444443321000
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCc
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl 240 (569)
....+.+++....... .......+++++++|||||||.||+|.++|.++..........+++..+|++++..|+
T Consensus 164 -----~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl 237 (547)
T PRK06087 164 -----SSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPL 237 (547)
T ss_pred -----CccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecch
Confidence 0123444443322211 1123456799999999999999999999999998888777777888999999999999
Q ss_pred hhhhhhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCc
Q 044926 241 FHSNGWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPP 319 (569)
Q Consensus 241 ~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~ 319 (569)
+|.+++.. .+.+++.|+++++.+.+++..+++.|+++++++++++|..+..+++........++ ++|.+++||++++
T Consensus 238 ~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~--~lr~i~~gG~~~~ 315 (547)
T PRK06087 238 GHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLS--ALRFFLCGGTTIP 315 (547)
T ss_pred HHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCC--CeEEEEEcCCCCC
Confidence 99999765 55667789999888889999999999999999999888877777776544444444 9999999999999
Q ss_pred HHHHHHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCcee
Q 044926 320 AAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLG 399 (569)
Q Consensus 320 ~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~G 399 (569)
+.+.+.+.+.++++++.||+||++++....... .......++|.+.++. .++++|+ ++.+++.| +.|
T Consensus 316 ~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~G 382 (547)
T PRK06087 316 KKVARECQQRGIKLLSVYGSTESSPHAVVNLDD---------PLSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEG 382 (547)
T ss_pred HHHHHHHHHcCCcEEEEecccccCCccccCCCc---------chhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--Ccc
Confidence 999998887799999999999998765543211 0111234678899988 9999996 67778777 899
Q ss_pred EEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeE
Q 044926 400 EIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAA 479 (569)
Q Consensus 400 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~ 479 (569)
||+++|+.++.||+++++.+...+..++||+|||+++++++|.+++.||.+|+|+.+|++++|.+||++|.++++|.+++
T Consensus 383 el~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~ 462 (547)
T PRK06087 383 EEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDAC 462 (547)
T ss_pred eEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEE
Confidence 99999999999999999988888877899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHh-ccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 480 VVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCR-GRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 480 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~-~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+++.+++..|+.++++++..+.. .....+++.++++ +.++.+++|..+.++++||+|.+||++|++|++++.+..
T Consensus 463 v~~~~~~~~g~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 463 VVAMPDERLGERSCAYVVLKAPH-HSLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred EEecCCCCcCceEEEEEEECCCC-CCCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 99999888889999999887532 2256788888875 679999999999999999999999999999998887753
No 44
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-66 Score=547.99 Aligned_cols=510 Identities=26% Similarity=0.383 Sum_probs=431.6
Q ss_pred CCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcc
Q 044926 9 ANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAA 88 (569)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 88 (569)
-...-+++.+.|.+++..+|+++|+.+.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 12 ~~~~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G 91 (542)
T PRK07786 12 YLARRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLG 91 (542)
T ss_pred CcccccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccc
Q 044926 89 AVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFS 168 (569)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (569)
++++|+++..+.+++.+++++++++.+|++....+.+.......+. ...++...+.... ...
T Consensus 92 ~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~~~ 153 (542)
T PRK07786 92 AIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPL---LSTVVVAGGSSDD---------------SVL 153 (542)
T ss_pred eEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCc---cceEEEecCCCcc---------------ccc
Confidence 9999999999999999999999999999998776655443322221 2344444322110 023
Q ss_pred hhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCC-CCCCEEEEecCchhhhhhh
Q 044926 169 TYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSV-PTQPVYLWTLPMFHSNGWC 247 (569)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~-~~~d~~~~~~pl~~~~g~~ 247 (569)
.+.+++....... .......+++++++|||||||.||+|.++|+++...+......+++ ..++++++..|++|.+|+.
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 232 (542)
T PRK07786 154 GYEDLLAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIG 232 (542)
T ss_pred CHHHHhhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHH
Confidence 4555444332221 1123456789999999999999999999999998888777777776 6788999999999999998
Q ss_pred HHHHHHHhCceEEEec--cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHH
Q 044926 248 FPWAMAAVGGTNICIR--KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLR 325 (569)
Q Consensus 248 ~~~~~~~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~ 325 (569)
..+.++..|+++++.+ .+++..+++.++++++|.++++|+++..++.........+ ++|.+++||+++++.+++.
T Consensus 233 ~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~---~lr~i~~gg~~~~~~~~~~ 309 (542)
T PRK07786 233 SMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDL---ALRVLSWGAAPASDTLLRQ 309 (542)
T ss_pred HHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCc---ceEEEEECCCCCCHHHHHH
Confidence 8888899999998865 5799999999999999999999999999988754433332 7899999999999999999
Q ss_pred HH-hc-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEE
Q 044926 326 TE-SL-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVL 403 (569)
Q Consensus 326 ~~-~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 403 (569)
+. .+ +.++++.||+||++++...+.... ......++|.|+++. .++|+|+ ++..++.+ +.|||++
T Consensus 310 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v 376 (542)
T PRK07786 310 MAATFPEAQILAAFGQTEMSPVTCMLLGED---------AIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVY 376 (542)
T ss_pred HHHHcCCCeEEeeecccccccceEecCccc---------ccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEE
Confidence 88 45 789999999999987655432211 112335789999998 9999996 67777776 8999999
Q ss_pred ecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEec
Q 044926 404 RGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVAR 483 (569)
Q Consensus 404 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 483 (569)
+|+.+++||+++++.+...|. ++||+|||+++++++|.+++.||.+|+|+++|.++++.+||.+|.++++|.+++|++.
T Consensus 377 ~g~~~~~gy~~~~~~~~~~f~-~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 455 (542)
T PRK07786 377 RAPTLMSGYWNNPEATAEAFA-GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGR 455 (542)
T ss_pred EChhhhhhhcCCHHHHHHHhh-CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEec
Confidence 999999999999999988887 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 484 PDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 484 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+.+..++.++++++..+... ....+++.++++++++.+++|..++++++||+|++||++|++|++++.+..
T Consensus 456 ~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 456 ADEKWGEVPVAVAAVRNDDA-ALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACV 526 (542)
T ss_pred cCcccCceEEEEEEECCCCC-CCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhh
Confidence 88877888888888765432 256789999999999999999999999999999999999999999999887
No 45
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-67 Score=551.53 Aligned_cols=516 Identities=24% Similarity=0.340 Sum_probs=410.9
Q ss_pred CCCCCCCCchHHHHHHHHHHcCCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 7 SPANSTPLTPLVFLERAATVYGDSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
++......|+.++|.+++..+|+++|+++.+ +.+||+||.++++++|.+|.+.|+++||+|+|+++|+++++++++||
T Consensus 9 ~~~~~~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 88 (534)
T PRK05852 9 PMASDFGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAA 88 (534)
T ss_pred chhhhhcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 3344556679999999999999999998744 57999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCC
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDD 164 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (569)
+++|+++++++|.++.+++.++++.++++++|++........... .. .....+.+....... . .
T Consensus 89 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~-------~----~ 152 (534)
T PRK05852 89 SRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TR---WWPLTVNVGGDSGPS-------G----G 152 (534)
T ss_pred HHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--cc---ccceeeeeccccccc-------c----c
Confidence 999999999999999999999999999999999864322111000 00 011111111111000 0 0
Q ss_pred cccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhh
Q 044926 165 QFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSN 244 (569)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~ 244 (569)
.....+...... ...........++.++++|||||||.||+|.++|+++...+......+++..+|++++..|++|..
T Consensus 153 ~~~~~~~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 230 (534)
T PRK05852 153 TLSVHLDAATEP--TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGH 230 (534)
T ss_pred ccccccccccCC--CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhH
Confidence 000000000000 000001112246889999999999999999999999998888888888899999999999999999
Q ss_pred hhhH-HHHHHHhCceEEEec--cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHH
Q 044926 245 GWCF-PWAMAAVGGTNICIR--KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAA 321 (569)
Q Consensus 245 g~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~ 321 (569)
++.. .+.+++.|+++++.+ .+++..+++.++++++|+++++|.++..+.+............++|.++++|+++++.
T Consensus 231 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~ 310 (534)
T PRK05852 231 GLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAE 310 (534)
T ss_pred HHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHH
Confidence 9876 445556666666543 4789999999999999999999999999988764332222233899999999999999
Q ss_pred HHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcc--cccceeeEEeCCCCCcccCCCCCce
Q 044926 322 VLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVK--TTALTEVDVLDPKSGVSAKRDGSTL 398 (569)
Q Consensus 322 ~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~i~d~~~~~~~~~~~~~~ 398 (569)
+++.+. .++.++++.||+||++..+..+....... ... ....+|.+ .+++ +++|+|+ ++..++.+ +.
T Consensus 311 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~---~~~---~~~~~g~~g~~~g~-~~~i~d~-~g~~~~~g--~~ 380 (534)
T PRK05852 311 TAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQ---TEN---PVVSTGLVGRSTGA-QIRIVGS-DGLPLPAG--AV 380 (534)
T ss_pred HHHHHHHHhCCChhhccCccccchhhhcCCcccccc---ccC---cccccccCCCCCCC-eEEEECC-CCCCCCCC--Cc
Confidence 999988 57999999999999987665432110000 000 01123333 5777 9999997 57778777 89
Q ss_pred eEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCccee
Q 044926 399 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEA 478 (569)
Q Consensus 399 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~ 478 (569)
|||+++|+.+++||+++++.+...|. ++||+|||+|++++||++++.||.+|+|+.+|.+|++.+||++|.++|+|.++
T Consensus 381 Gel~v~g~~v~~gY~~~~~~t~~~~~-~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~ 459 (534)
T PRK05852 381 GEVWLRGTTVVRGYLGDPTITAANFT-DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEA 459 (534)
T ss_pred eEEEEecCcccchhcCCcccchhhhc-CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeE
Confidence 99999999999999999999988887 89999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 479 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
+|++.+++..++.++++|+..+... .+.+++.++++++++.+++|..++++++||+|++||++|++|+++|..
T Consensus 460 ~v~g~~~~~~g~~~~~~vv~~~~~~--~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 460 AVFGVPDQLYGEAVAAVIVPRESAP--PTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred EEEecCCcCcCceEEEEEEECCCCC--CCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 9999999888888999988766544 678999999999999999999999999999999999999999998853
No 46
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2e-66 Score=550.19 Aligned_cols=520 Identities=29% Similarity=0.475 Sum_probs=428.1
Q ss_pred CCCCCCCCchHHHHHHHHHHcCCCCeEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 7 SPANSTPLTPLVFLERAATVYGDSPSIIY--NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 7 ~~~~~~~~tl~~~l~~~a~~~p~~~al~~--~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
..+...+.|+.++|.+.++.+|+++|+++ .++.+||+||.++++++|..|.+.|+++||+|+++++|++++++++|||
T Consensus 9 ~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~ 88 (559)
T PRK08315 9 TDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFAT 88 (559)
T ss_pred CcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHH
Confidence 34456788999999999999999999988 4578999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHH-----HHHHHHhcCCC--------C--CCCCCEEEEeCCCc
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA-----LVREAVSLFPP--------D--LKPPPLVLISDDDD 149 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~--------~--~~~~~~~~~~~~~~ 149 (569)
+++|++++|++|..+.+++.++++.++++.+|++.+... .+.+....... . .....++.......
T Consensus 89 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (559)
T PRK08315 89 AKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKH 168 (559)
T ss_pred HHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCC
Confidence 999999999999999999999999999999999875421 12221111100 0 00122222221110
Q ss_pred ccccccCCCCCCCCCcccchhhHhhhcCCCC-----cccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc
Q 044926 150 AAVSSQSHHPNISDDQFFSTYESLVAKGDPE-----FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS 224 (569)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~ 224 (569)
.....+.++....... ........++++++++|||||||.||+|.++|+++..++.....
T Consensus 169 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~ 233 (559)
T PRK08315 169 ---------------PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGE 233 (559)
T ss_pred ---------------cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHH
Confidence 0013344433322100 01112245678999999999999999999999999988888888
Q ss_pred cCCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEe-ccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCC
Q 044926 225 DWSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICI-RKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKP 302 (569)
Q Consensus 225 ~~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~ 302 (569)
.+++..+|+++...|++|..++.. .+.++..|+++++. ..+++..+++.++++++|++.++|+++..+..........
T Consensus 234 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~ 313 (559)
T PRK08315 234 AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFD 313 (559)
T ss_pred hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCC
Confidence 889999999999999999999866 55667778887744 4589999999999999999999999999888765544444
Q ss_pred CCcCCCceEEEeCCCCcHHHHHHHH-hcCC-eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceee
Q 044926 303 LKLAKPVHLVTAGAPPPAAVLLRTE-SLGF-KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEV 380 (569)
Q Consensus 303 ~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 380 (569)
+. ++|.+++||++++..+.+.+. .++. ++++.||+||++.++..+..... ......++|.|.++. .+
T Consensus 314 ~~--~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~v 382 (559)
T PRK08315 314 LS--SLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP--------LEKRVTTVGRALPHL-EV 382 (559)
T ss_pred ch--hhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc--------hhhccCCCCccCCCc-EE
Confidence 44 999999999999999998887 5554 49999999999876654432211 112346789999998 99
Q ss_pred EEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceee
Q 044926 381 DVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENL 460 (569)
Q Consensus 381 ~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v 460 (569)
+|+|++++..++.| +.|||+++|++++.||++++..+...+..++||+|||+|++++||.+++.||.+|+++.+|.++
T Consensus 383 ~i~d~~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v 460 (559)
T PRK08315 383 KIVDPETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENI 460 (559)
T ss_pred EEEcCccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEE
Confidence 99999878888887 8999999999999999999998888886689999999999999999999999999999999999
Q ss_pred eHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCC
Q 044926 461 SSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTG 540 (569)
Q Consensus 461 ~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~G 540 (569)
++.+||++|.++++|.+++|++..++..++.++++|+..++.. ...++++++++++++.+++|..++++++||+|++|
T Consensus 461 ~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~G 538 (559)
T PRK08315 461 YPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGAT--LTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTG 538 (559)
T ss_pred cHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCC--CCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCC
Confidence 9999999999999999999999998877788888888876654 67789999999999999999999999999999999
Q ss_pred cccHHHHHHHHHhcCC
Q 044926 541 KIQKFVLREIAENMGS 556 (569)
Q Consensus 541 Ki~r~~l~~~~~~~~~ 556 (569)
|++|.+|++++.++..
T Consensus 539 K~~r~~L~~~~~~~~~ 554 (559)
T PRK08315 539 KIQKFKMREMMIEELG 554 (559)
T ss_pred ceeHHHHHHHHHhhhc
Confidence 9999999999887654
No 47
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.2e-66 Score=556.85 Aligned_cols=503 Identities=18% Similarity=0.220 Sum_probs=392.6
Q ss_pred HcCCCCeEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCH
Q 044926 26 VYGDSPSIIYNN-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDA 100 (569)
Q Consensus 26 ~~p~~~al~~~~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (569)
.+++++|+++.+ +.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.
T Consensus 96 ~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~ 175 (652)
T TIGR01217 96 AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGA 175 (652)
T ss_pred cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCH
Confidence 467899998743 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEEcccc---------HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhh
Q 044926 101 RTVSLLLQHCQSKLVFVDFHS---------RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYE 171 (569)
Q Consensus 101 ~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
+++.+++++++++++|+++.. .+.+.++....+. .+.++++......... . .. .. ....++
T Consensus 176 ~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~--~--~~-~~--~~~~~~ 245 (652)
T TIGR01217 176 RGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPT---LRAVVHIPYLGPRETE--A--PK-ID--GALDLE 245 (652)
T ss_pred HHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCC---ccEEEEEeCCCCcccc--c--cc-cc--CcccHH
Confidence 999999999999999998653 3344444433321 3445554322110000 0 00 00 123456
Q ss_pred HhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHH-HHhhhhccCCCCCCCEEEEecCchhhhhhhHHH
Q 044926 172 SLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFI-VAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPW 250 (569)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~-~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~ 250 (569)
+++...............+++++|+|||||||.||||+++|.+++. ........+++.++|++++..|+.|... ...+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~ 324 (652)
T TIGR01217 246 DFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-NWLV 324 (652)
T ss_pred HHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-HHHH
Confidence 6554321111111234568999999999999999999999998654 3444455678899999999999998753 3456
Q ss_pred HHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHH
Q 044926 251 AMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRT 326 (569)
Q Consensus 251 ~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~ 326 (569)
.+++.|+++++.+. .++..++++++++++|++...|.++..+............++++|.+++||+++++++.+++
T Consensus 325 ~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~ 404 (652)
T TIGR01217 325 SGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWV 404 (652)
T ss_pred HHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHH
Confidence 78899999998752 37889999999999999988888887776542221122234499999999999999999988
Q ss_pred H-hcC--CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEE
Q 044926 327 E-SLG--FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVL 403 (569)
Q Consensus 327 ~-~~~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 403 (569)
. .++ +.+.+.||+||+++...... . . .......+|.|.++. +++|+|+ +|.++ .| +.|||++
T Consensus 405 ~~~~~~~~~~~~~yG~TE~~~~~~~~~--~-------~-~~~~~g~~g~p~~g~-~v~ivd~-~g~~~-~g--~~GEl~v 469 (652)
T TIGR01217 405 YDEIKADVWLASISGGTDICSCFAGAN--P-------T-LPVHIGEIQAPGLGT-AVQSWDP-EGKPV-TG--EVGELVC 469 (652)
T ss_pred HHHhCCCceEEeccCHHHHhccccCCC--C-------C-CCCcCCccCCCcCCC-ceEEECC-CCCCC-CC--CccEEEE
Confidence 7 443 56788999999753332211 0 0 011234678889998 9999997 56666 35 8999999
Q ss_pred ecC--cccccccCCccccc--cc-cC-CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcce
Q 044926 404 RGG--CIMLGYLKDPIGTR--KC-MT-DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNE 477 (569)
Q Consensus 404 ~~~--~~~~gy~~~~~~~~--~~-~~-~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~ 477 (569)
+|| +++.|||++++.+. .. |. .+|||+|||+|++++||++++.||.||+|+++|++|+|.+||.+|.+||+|.+
T Consensus 470 ~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~e 549 (652)
T TIGR01217 470 TNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRE 549 (652)
T ss_pred ecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcce
Confidence 996 68999999998654 11 22 26789999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCCCceeEEEEEecCCCCCC-CCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 478 AAVVARPDEFWGETPCAFVSLKEGSKSK-PTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 478 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
++|++.+++.+|+.++++|++.++.... ...++|+++++++|+.+++|+.|+++++||+|++||++|+.|++.+...
T Consensus 550 aavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 550 SLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGT 627 (652)
T ss_pred EEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCC
Confidence 9999999998899999999998765411 1236899999999999999999999999999999999999999987543
No 48
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-66 Score=550.88 Aligned_cols=533 Identities=26% Similarity=0.414 Sum_probs=429.7
Q ss_pred CCCCCCCchHHHHHHHHHHcCCCCeEEeCC---eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHH
Q 044926 8 PANSTPLTPLVFLERAATVYGDSPSIIYNN---ITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFA 83 (569)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~---~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA 83 (569)
...+.|+|+.++|++++..+|++.|+++.+ +.+||+||.+++.++|.+|.+ .|+++||+|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA 83 (576)
T PRK05620 4 TMQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFA 83 (576)
T ss_pred hhhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 456788999999999999999999998753 789999999999999999997 7999999999999999999999999
Q ss_pred hhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCC
Q 044926 84 VPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISD 163 (569)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (569)
|+++|+++++++|+.+.+++.++++.++++++|++....+.+.+....... ...++.++...... .. .....
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~---~~--~~~~~ 155 (576)
T PRK05620 84 VACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPC---VRAVVFIGPSDADS---AA--AHMPE 155 (576)
T ss_pred HHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCcc---ccEEEEecCccccc---ch--hcccc
Confidence 999999999999999999999999999999999998877776666544332 23444443221110 00 00011
Q ss_pred CcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhh--hccCCCCCCCEEEEecCch
Q 044926 164 DQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNT--LSDWSVPTQPVYLWTLPMF 241 (569)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~--~~~~~~~~~d~~~~~~pl~ 241 (569)
.....++.++++....... .....++++++++|||||||.||+|.++|+++....... ...+++..++++++..|++
T Consensus 156 ~~~~~~~~~l~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 234 (576)
T PRK05620 156 GIKVYSYEALLDGRSTVYD-WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIY 234 (576)
T ss_pred ccccccHHHHhhcCCCcCC-CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChH
Confidence 1123457777654322211 123456899999999999999999999999986554432 2346788999999999999
Q ss_pred hhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcH
Q 044926 242 HSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPA 320 (569)
Q Consensus 242 ~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~ 320 (569)
|.+++...+.++..|+++++.+ .+++..+++.++++++|+++++|+++..++........... ++|.+++||+.+++
T Consensus 235 h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~l~~~~~gG~~~~~ 312 (576)
T PRK05620 235 HVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERM--SLQEIYVGGSAVPP 312 (576)
T ss_pred HhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccC--ceeEEEEcCCCCCH
Confidence 9999988888888999888765 47999999999999999999999999988765432322333 79999999999999
Q ss_pred HHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCcee
Q 044926 321 AVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLG 399 (569)
Q Consensus 321 ~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~G 399 (569)
.+.++++ .+++++++.||+||++..+......... ..........++|.+.++. +++++|+ +..++..+++.|
T Consensus 313 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~---~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~G 386 (576)
T PRK05620 313 ILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGV---SGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEG 386 (576)
T ss_pred HHHHHHHHHhCCceeeeccccccccceeeeccCCcc---ccccccccccccCCcCCce-eEEEecC--CccccCCCCCce
Confidence 9999987 5689999999999998765543211100 0000001123678888887 8999985 555543333789
Q ss_pred EEEEecCcccccccCCcccc----------------ccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHH
Q 044926 400 EIVLRGGCIMLGYLKDPIGT----------------RKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSV 463 (569)
Q Consensus 400 el~v~~~~~~~gy~~~~~~~----------------~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~ 463 (569)
||+++|++++.||+++++.+ ...+..++||+|||+|++++||.+++.||.+|+|+.+|.+|++.
T Consensus 387 el~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~ 466 (576)
T PRK05620 387 EIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSA 466 (576)
T ss_pred EEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHH
Confidence 99999999999999998877 23344578999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCC-CCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcc
Q 044926 464 EVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSK-SKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKI 542 (569)
Q Consensus 464 ~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi 542 (569)
+||.+|.++|.|.+++|++.+++..|+.++++++..++.. .+...++|+++++++|+.+++|+.++++++||+|.+||+
T Consensus 467 eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv 546 (576)
T PRK05620 467 QLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKF 546 (576)
T ss_pred HHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccC
Confidence 9999999999999999999999988888888888877643 124678999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcCCC
Q 044926 543 QKFVLREIAENMGSS 557 (569)
Q Consensus 543 ~r~~l~~~~~~~~~~ 557 (569)
+|++|++++.+....
T Consensus 547 ~r~~L~~~~~~~~~~ 561 (576)
T PRK05620 547 DKKDLRQHLADGDFE 561 (576)
T ss_pred cHHHHHHHHhcCCcc
Confidence 999999999987643
No 49
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-66 Score=558.69 Aligned_cols=512 Identities=20% Similarity=0.226 Sum_probs=401.8
Q ss_pred chHHHHHHHHHHcCCCCeEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 15 TPLVFLERAATVYGDSPSIIYNN-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
++.+.+.++ .+|+++|+++.+ +.+||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Ga 164 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGA 164 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 444444332 579999999854 6899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEcccc---------HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCC
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHS---------RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPN 160 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (569)
+++|+++.++.+++.++++.++++++|+++.. .+.+.+....... ...++.+........ .
T Consensus 165 v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~------~- 234 (655)
T PRK03584 165 IWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPS---LEHVVVVPYLGPAAA------A- 234 (655)
T ss_pred EEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCC---ccEEEEEecCCCccc------c-
Confidence 99999999999999999999999999998653 2233333332221 344555443211000 0
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHH-HhhhhccCCCCCCCEEEEecC
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIV-AVNTLSDWSVPTQPVYLWTLP 239 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~-~~~~~~~~~~~~~d~~~~~~p 239 (569)
........|++++...............+++++|+|||||||.||||+++|.+++.. .......+++.++|++++..+
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 313 (655)
T PRK03584 235 -AALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTT 313 (655)
T ss_pred -cccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCC
Confidence 000012345565542222111223356789999999999999999999999987543 455556678899999999999
Q ss_pred chhhhhhhHHHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC
Q 044926 240 MFHSNGWCFPWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG 315 (569)
Q Consensus 240 l~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g 315 (569)
+.|... ...+.+++.|+++++.+. .++..++++++++++|++.++|+++..+.+..........++++|.+++||
T Consensus 314 ~~~~~~-~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~G 392 (655)
T PRK03584 314 CGWMMW-NWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTG 392 (655)
T ss_pred chHHhH-HHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEec
Confidence 888754 345678889999988752 579999999999999999999999999876532222222334999999999
Q ss_pred CCCcHHHHHHHH-hc--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccC
Q 044926 316 APPPAAVLLRTE-SL--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAK 392 (569)
Q Consensus 316 ~~l~~~~~~~~~-~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 392 (569)
+++++++.+++. .+ ++.+++.||+||+++.+..... .......++|.|.+++ +++|+|+ +|..+
T Consensus 393 e~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~----------~~~~~~g~~g~p~~g~-~~~ivd~-~g~~~- 459 (655)
T PRK03584 393 SPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNP----------LLPVYRGEIQCRGLGM-AVEAWDE-DGRPV- 459 (655)
T ss_pred CCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCC----------CCCcCCCccCCCcCCc-eeEEECC-CCCCC-
Confidence 999999999987 44 5889999999998644332110 0011235678899998 9999997 56666
Q ss_pred CCCCceeEEEEecC--cccccccCCcccccc--c-cC-CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHH
Q 044926 393 RDGSTLGEIVLRGG--CIMLGYLKDPIGTRK--C-MT-DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVE 466 (569)
Q Consensus 393 ~~~~~~Gel~v~~~--~~~~gy~~~~~~~~~--~-~~-~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE 466 (569)
.+ +.|||+++|| +++.||+++++.+.. . |. .++||+|||+|++++||++++.||.||+||++|++|++.+||
T Consensus 460 ~g--~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE 537 (655)
T PRK03584 460 VG--EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIY 537 (655)
T ss_pred CC--CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHH
Confidence 45 8899999996 799999999875431 1 11 257899999999999999999999999999999999999999
Q ss_pred HHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCC-CCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHH
Q 044926 467 SVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSK-PTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKF 545 (569)
Q Consensus 467 ~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~ 545 (569)
.+|.+||+|.+++|++.+++..++.++++|++.++.... ...++|+++++++|+.+++|..++++++||+|++||++|+
T Consensus 538 ~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~ 617 (655)
T PRK03584 538 RQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVEL 617 (655)
T ss_pred HHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHH
Confidence 999999999999999999988889999999998764311 1236899999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 044926 546 VLREIAENMG 555 (569)
Q Consensus 546 ~l~~~~~~~~ 555 (569)
.|++++.+..
T Consensus 618 ~lr~~~~~~~ 627 (655)
T PRK03584 618 PVKKLLHGRP 627 (655)
T ss_pred HHHHHHcCCC
Confidence 9999987654
No 50
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.8e-66 Score=542.37 Aligned_cols=498 Identities=27% Similarity=0.395 Sum_probs=423.8
Q ss_pred CCchHHHHHHHHHHcCCCCeEEe-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 13 PLTPLVFLERAATVYGDSPSIIY-NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~-~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
.-++.++|.+++ .+|+++|+.+ .++.+||.||.++++++|..|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 357899999999 9999999987 56789999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhh
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYE 171 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
+|+++..+.+++.++++.++++++|+++...+.+........ ...++.++.... ..+.
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------------~~~~ 138 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAG----APHVETLDADGT------------------GSLL 138 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccC----CceEEEecCCCc------------------ccHH
Confidence 999999999999999999999999999887665554433221 222443332211 0111
Q ss_pred HhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HH
Q 044926 172 SLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PW 250 (569)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~ 250 (569)
+....... ........++++++++|||||||.||+|.++|+++...+......+++..+|++++..|++|..++.. .+
T Consensus 139 ~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 217 (504)
T PRK07514 139 EAAAAAPD-DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATN 217 (504)
T ss_pred HhhhhcCc-ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHH
Confidence 11111111 11112345789999999999999999999999999988888777888999999999999999998865 56
Q ss_pred HHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hc
Q 044926 251 AMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SL 329 (569)
Q Consensus 251 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~ 329 (569)
..++.|+++++.+..++..+++.+. ++|++.++|.++..+++........++ ++|.+++||+++++.+.+.+. .+
T Consensus 218 ~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~~~~gg~~~~~~~~~~~~~~~ 293 (504)
T PRK07514 218 VALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAA--HMRLFISGSAPLLAETHREFQERT 293 (504)
T ss_pred HHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCccccc--ceeeEEecCCCCCHHHHHHHHHHh
Confidence 6788899999888889999999994 699999999999999887654444454 899999999999999999988 56
Q ss_pred CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccc
Q 044926 330 GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIM 409 (569)
Q Consensus 330 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 409 (569)
+.++++.||+||++....... ........+|.|.++. +++|+|++++.+++.| +.|||+++|+.++
T Consensus 294 ~~~~~~~YG~tE~~~~~~~~~-----------~~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~ 359 (504)
T PRK07514 294 GHAILERYGMTETNMNTSNPY-----------DGERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVF 359 (504)
T ss_pred CCcceeecccccccccccCCc-----------cccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCcc
Confidence 899999999999875443211 0111235788999998 9999998899998877 8999999999999
Q ss_pred ccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCC
Q 044926 410 LGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWG 489 (569)
Q Consensus 410 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~ 489 (569)
.||+++++.+...|..++||+|||+|+++++|.+++.||.+|+|+.+|+++++.+||+.+.++++|.+++|++.+++..+
T Consensus 360 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~ 439 (504)
T PRK07514 360 KGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFG 439 (504)
T ss_pred ccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcC
Confidence 99999999998888878999999999999999999999999999999999999999999999999999999999988778
Q ss_pred ceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 490 ETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 490 ~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+.++++++..++.. .+.+++++.++++++++++|..++++++||+|++||++|++|+++++++
T Consensus 440 ~~~~~~~~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 440 EGVTAVVVPKPGAA--LDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred ceEEEEEEECCCCC--CCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 88899998876654 5788999999999999999999999999999999999999999998865
No 51
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-66 Score=542.93 Aligned_cols=490 Identities=23% Similarity=0.287 Sum_probs=406.8
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSI-GISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.+.|+.++|++++. ++++|+++.++.+||+||.++++++|.+|.+. |++++++|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 80 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIV 80 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCE
Confidence 45679999998885 78999999999999999999999999999997 8899999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchh
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTY 170 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (569)
++|+++..+.+++.+++++++++++|++++....+.... . ...++.+.. ..+
T Consensus 81 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~----~~~~~~~~~---------------------~~~ 132 (529)
T PRK07867 81 PVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---P----GVRVINVDS---------------------PAW 132 (529)
T ss_pred EEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---c----CceEEEecc---------------------ccH
Confidence 999999999999999999999999999987665433321 0 112222211 113
Q ss_pred hHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHH-
Q 044926 171 ESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFP- 249 (569)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~- 249 (569)
.+.+..............++++++++|||||||.||+|.++|+++..........+++..+|++++..|++|..++...
T Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~ 212 (529)
T PRK07867 133 ADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGW 212 (529)
T ss_pred HHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHH
Confidence 3322221111111123456899999999999999999999999998888888888899999999999999999988664
Q ss_pred HHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhc
Q 044926 250 WAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESL 329 (569)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~ 329 (569)
+..+..|+++++.+.+++..+++.++++++|++.++|+.+..++...+...... .++| +++||+.+++......+.+
T Consensus 213 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~--~~lr-~~~gg~~~~~~~~~~~~~~ 289 (529)
T PRK07867 213 AVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDAD--NPLR-IVYGNEGAPGDIARFARRF 289 (529)
T ss_pred HHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccc--cceE-EEecCCCChHHHHHHHHHh
Confidence 456778888888788899999999999999999999999999887654332222 2666 4568888887654444477
Q ss_pred CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCc------------
Q 044926 330 GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGST------------ 397 (569)
Q Consensus 330 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~------------ 397 (569)
++++++.||+||++..+..+. . ....++|.+.++ ++++|++++..++.+ +
T Consensus 290 g~~l~~~YG~TE~~~~~~~~~---~----------~~~~~~g~~~~~---~~i~~~~~~~~~~~g--~~~~~~~~~~~~~ 351 (529)
T PRK07867 290 GCVVVDGFGSTEGGVAITRTP---D----------TPPGALGPLPPG---VAIVDPDTGTECPPA--EDADGRLLNADEA 351 (529)
T ss_pred CCcEEEeecccccccccccCC---C----------CCCCCcCCCCCC---EEEEECCCCCCCCCC--ccccccccccCCc
Confidence 999999999999975543221 0 112457888776 677887778777776 5
Q ss_pred eeEEEE-ecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcc
Q 044926 398 LGEIVL-RGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVN 476 (569)
Q Consensus 398 ~Gel~v-~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~ 476 (569)
.|||++ +|++++.||+++++.+...+. +|||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||++|.++|+|.
T Consensus 352 ~Gel~i~~g~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~ 430 (529)
T PRK07867 352 IGELVNTAGPGGFEGYYNDPEADAERMR-GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDAT 430 (529)
T ss_pred ceEEEEecCCcccccccCChHhhhhhhc-CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCee
Confidence 899999 999999999999999888887 899999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc--CCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 477 EAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR--LPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 477 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~--l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+++|++.+++..|+.++++++..++.. .+.++++++++++ |+.+++|..++++++||+|++||++|++|+++....
T Consensus 431 ~~~V~g~~~~~~g~~~~a~vv~~~~~~--~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~ 508 (529)
T PRK07867 431 EVAVYAVPDPVVGDQVMAALVLAPGAK--FDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDC 508 (529)
T ss_pred EEEEEeccCCCCCeeEEEEEEECCCCC--CCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCC
Confidence 999999999988999999999887655 6889999999875 999999999999999999999999999999987554
Q ss_pred C
Q 044926 555 G 555 (569)
Q Consensus 555 ~ 555 (569)
.
T Consensus 509 ~ 509 (529)
T PRK07867 509 A 509 (529)
T ss_pred C
Confidence 4
No 52
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-66 Score=541.49 Aligned_cols=492 Identities=31% Similarity=0.456 Sum_probs=416.9
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
+++.++|.++++.+|+++|+++.++.+||.||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++..+.+++.++++.++++.++++.+....... ....+.++.... ..+..+
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~----------~~~~~~~~~~~~------------------~~~~~~ 133 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL----------ETPKIVIDAAAQ------------------ADSRRL 133 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhhc----------ccceEEecCccc------------------chhHHH
Confidence 9999999999999999999999998765432110 112222221110 001111
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PWAM 252 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~~~ 252 (569)
... ...........++++++++|||||||.||+|.++|+++...+......+++..+++++...|++|.+++.. .+..
T Consensus 134 ~~~-~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 212 (497)
T PRK06145 134 AQG-GLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAV 212 (497)
T ss_pred hcc-CCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHH
Confidence 100 00111112345679999999999999999999999999877666666778999999999999999998865 4667
Q ss_pred HHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hc-C
Q 044926 253 AAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SL-G 330 (569)
Q Consensus 253 ~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~-~ 330 (569)
++.|+++++.+.+++..+++.++++++|++.++|+++..++.........++ ++|.+++||+++++.+++.+. .+ +
T Consensus 213 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~--~l~~~~~gG~~~~~~~~~~~~~~~~~ 290 (497)
T PRK06145 213 LWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLD--SLAWCIGGGEKTPESRIRDFTRVFTR 290 (497)
T ss_pred HhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccc--cceEEEecCCCCCHHHHHHHHHHcCC
Confidence 7889998888889999999999999999999999999999987655444444 899999999999999999887 44 6
Q ss_pred CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccc
Q 044926 331 FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIML 410 (569)
Q Consensus 331 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 410 (569)
.++++.||+||+++.++...... ......++|.+.++. .++++|+ ++..++.+ +.|||+++|++++.
T Consensus 291 ~~v~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~ 357 (497)
T PRK06145 291 ARYIDAYGLTETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTK 357 (497)
T ss_pred CceEEeecCcccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhh
Confidence 88999999999987654332111 111234689999998 9999997 67777776 89999999999999
Q ss_pred cccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCc
Q 044926 411 GYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGE 490 (569)
Q Consensus 411 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~ 490 (569)
||+++++.+...|. ++||+|||+|++++||++++.||.+|+|+.+|.++++.+||..|.++++|.+++|++.+++..|+
T Consensus 358 Gy~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 436 (497)
T PRK06145 358 GYWKDPEKTAEAFY-GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGE 436 (497)
T ss_pred hhcCChHHHHHHHh-CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCc
Confidence 99999999888886 89999999999999999999999999999999999999999999999999999999999988888
Q ss_pred eeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHH
Q 044926 491 TPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAE 552 (569)
Q Consensus 491 ~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~ 552 (569)
.+++++++.+... ...++++++++++++.+++|..++++++||+|++||++|++|++++.
T Consensus 437 ~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 437 RITAVVVLNPGAT--LTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred eEEEEEEECCCCC--CCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 8999988876544 57889999999999999999999999999999999999999998764
No 53
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-66 Score=546.47 Aligned_cols=520 Identities=26% Similarity=0.326 Sum_probs=419.5
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
.....++.++|.+++..+|+++|++..++.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 85 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGA 85 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCc
Confidence 34556899999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHH-HHHHHHhcCCCC--CCCCCEEEEeCCCcccccccCCCCCCCCCcc
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA-LVREAVSLFPPD--LKPPPLVLISDDDDAAVSSQSHHPNISDDQF 166 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (569)
+++|+++..+.+++.+++++++++++|++.+... .+.......... ...+.++.++...... +...
T Consensus 86 ~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 154 (540)
T PRK06164 86 TVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADAT-------PAPA---- 154 (540)
T ss_pred EEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccC-------CCCC----
Confidence 9999999999999999999999999999876421 111111111110 0123444443211100 0000
Q ss_pred cchhhHhhhcCCCCc--c-cCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhh
Q 044926 167 FSTYESLVAKGDPEF--E-WIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHS 243 (569)
Q Consensus 167 ~~~~~~~~~~~~~~~--~-~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~ 243 (569)
...+........... . ......++++++++|||||||.||+|.++|+++..+.......+++..++++++.+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 234 (540)
T PRK06164 155 PGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGV 234 (540)
T ss_pred cccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhH
Confidence 000001111000000 0 0112346789999999999999999999999999988888888899999999999999999
Q ss_pred hhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC-CCCcHHH
Q 044926 244 NGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG-APPPAAV 322 (569)
Q Consensus 244 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g-~~l~~~~ 322 (569)
+|+...+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+.. .....++ +++.+.++| .......
T Consensus 235 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~--~l~~~~~~~~~~~~~~~ 311 (540)
T PRK06164 235 FGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFP--SARLFGFASFAPALGEL 311 (540)
T ss_pred HHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCc--ceeeeeeccCCcchHHH
Confidence 99988888899999998888899999999999999999999999999998872 2333444 888876665 4555666
Q ss_pred HHHHHhcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCccc-ccceeeEEeCCCCCcccCCCCCceeEE
Q 044926 323 LLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKT-TALTEVDVLDPKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 323 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel 401 (569)
.+++...++++++.||+||+++.+..+..... ........|.+. +++ .++|+|++++..++.| +.|||
T Consensus 312 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel 380 (540)
T PRK06164 312 AALARARGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEI 380 (540)
T ss_pred HHHHhhcCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEE
Confidence 66666568999999999999876554332110 011123456665 455 8999999889888877 89999
Q ss_pred EEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
|++|++++.||+++++.+...|..++||+|||+|++++||.+++.||.+|+|+.+|++|+|.+||+.|.++++|.+++|+
T Consensus 381 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~ 460 (540)
T PRK06164 381 EIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVV 460 (540)
T ss_pred EEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEE
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCC---cccHHHHHHHHHhcCCC
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTG---KIQKFVLREIAENMGSS 557 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~G---Ki~r~~l~~~~~~~~~~ 557 (569)
+.+. ..+..++++++..++.. .+.++++++++++++++++|+.++++++||+|++| |++|+.|++++++..+.
T Consensus 461 ~~~~-~~~~~~~~~vv~~~~~~--~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~ 536 (540)
T PRK06164 461 GATR-DGKTVPVAFVIPTDGAS--PDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAA 536 (540)
T ss_pred ecCC-CCceeEEEEEEeCCCCC--CCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhh
Confidence 9874 34567888888876654 67899999999999999999999999999999998 99999999998877654
No 54
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=5e-66 Score=543.74 Aligned_cols=498 Identities=30% Similarity=0.449 Sum_probs=414.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEe------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIY------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
+.+.|+.++|++++..+|+++|++. .++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~ 98 (538)
T TIGR03208 19 WRDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLAC 98 (538)
T ss_pred cccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 4567899999999999999999986 2368999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHH-----HHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA-----LVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
+++|++++|++|..+.+++.++++.++++++|+++.... ...+....... ...++..+....
T Consensus 99 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---------- 165 (538)
T TIGR03208 99 ARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPA---LRQVVVIDGDGD---------- 165 (538)
T ss_pred HhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCc---ceEEEEecCCCC----------
Confidence 999999999999999999999999999999999876421 11121111111 233444432110
Q ss_pred CCCCCcccchhhHhhhcCCCC--c-----ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCC
Q 044926 160 NISDDQFFSTYESLVAKGDPE--F-----EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQP 232 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d 232 (569)
..++.++...... . .......++++++++|||||||.||+|.++|+++...+......+++..+|
T Consensus 166 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d 237 (538)
T TIGR03208 166 --------DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGD 237 (538)
T ss_pred --------cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCC
Confidence 1122222111000 0 001124568999999999999999999999999998888888888889999
Q ss_pred EEEEecCchhhhhhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceE
Q 044926 233 VYLWTLPMFHSNGWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHL 311 (569)
Q Consensus 233 ~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~ 311 (569)
++++..|++|..++.. .+.+++.|+++++.+.+++..+++.++++++|++.++|.++..+..........++ ++|.+
T Consensus 238 ~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~--~l~~~ 315 (538)
T TIGR03208 238 VILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVP--SLFTF 315 (538)
T ss_pred eEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCC--cceEE
Confidence 9999999999988755 66778889988888888999999999999999999999999998876543334444 89999
Q ss_pred EEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcc
Q 044926 312 VTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVS 390 (569)
Q Consensus 312 ~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 390 (569)
++||+++++.+.++++ .+++++++.||+||++++...+.... .......+|.|.+++ .++|+|+ ++..
T Consensus 316 ~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~-~~~~ 384 (538)
T TIGR03208 316 LCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDA-NGAK 384 (538)
T ss_pred EEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECC-CCCC
Confidence 9999999999999887 57999999999999987655432110 111234679999998 9999997 6777
Q ss_pred cCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926 391 AKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY 470 (569)
Q Consensus 391 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~ 470 (569)
++.| +.|||+++|+.++.||+++++.+. +..++||+|||+|+++++|.+++.||.+|+|+.+|++|+|.+||.+|.
T Consensus 385 ~~~g--~~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~ 460 (538)
T TIGR03208 385 LSQG--ETGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLY 460 (538)
T ss_pred CcCC--CCcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHh
Confidence 7776 889999999999999999987764 345899999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhc-cCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRG-RLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
++++|.+++|++.+++..|+.+.++++..++.. .+.+++.+++++ +++.+++|..++++++||+|++||++|++|+
T Consensus 461 ~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~--~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 461 QHPAVAQVAIVAYPDERLGERACAVVVPKPGCT--LDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred cCcceeeEEEEeccCCCCCceEEEEEEECCCCC--CCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 999999999999998888888999999876654 677899999985 7999999999999999999999999999986
No 55
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3.1e-66 Score=543.42 Aligned_cols=503 Identities=24% Similarity=0.351 Sum_probs=416.4
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNN-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPF 86 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 86 (569)
...|+.++|+++++++|+++|+++.+ +.+||.||.++++++|.+|.+.|+++||+|+++++|+.+++++++||++
T Consensus 5 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 5 GGQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred ccccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 44689999999999999999998754 6899999999999999999999999999999999999999999999999
Q ss_pred ccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcc
Q 044926 87 AAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQF 166 (569)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (569)
+|+++++++|..+.+++.+++++++++.+|++.+..+.+.+........ .+.++......... ..
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~ 149 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATP--LRHICLTRVALPAD-------------DG 149 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcccc--CcEEEEecCCCccc-------------cc
Confidence 9999999999999999999999999999999988777666554332211 33444443321100 00
Q ss_pred cchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhh
Q 044926 167 FSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGW 246 (569)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~ 246 (569)
...+.+.............+..++++++++|||||||.||+|.++|.++............+..++++++..|++|..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 229 (517)
T PRK08008 150 VSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQ 229 (517)
T ss_pred ccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHH
Confidence 23344433332222122223456899999999999999999999999998665444444567889999999999998766
Q ss_pred hH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHH
Q 044926 247 CF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLR 325 (569)
Q Consensus 247 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~ 325 (569)
.. .+.++..|+++++.+.+++..+++.++++++|++.++|.++..++........... .++.+.+++ .+++.....
T Consensus 230 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~l~~~~~~~-~~~~~~~~~ 306 (517)
T PRK08008 230 CTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQH--CLREVMFYL-NLSDQEKDA 306 (517)
T ss_pred HHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccc--cceeeEEec-CCCHHHHHH
Confidence 55 56667788888888889999999999999999999999999998876543333333 677777754 788888877
Q ss_pred HH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEe
Q 044926 326 TE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLR 404 (569)
Q Consensus 326 ~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 404 (569)
+. .+++++++.||+||+++.+....... .....++|.|.++. +++|+|+ ++..++.| +.|||+++
T Consensus 307 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~ 372 (517)
T PRK08008 307 FEERFGVRLLTSYGMTETIVGIIGDRPGD----------KRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIK 372 (517)
T ss_pred HHHHhCCeEEeeccccccccccccCCccc----------cccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEe
Confidence 76 56999999999999986555432111 12235789999998 9999996 67888877 89999999
Q ss_pred c---CcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 405 G---GCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 405 ~---~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
| ++++.||+++++.+...|..++||+|||+|++++||.+++.||.+|+|+.+|++|+|.+||.++.+++.|.+++|+
T Consensus 373 g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~ 452 (517)
T PRK08008 373 GVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVV 452 (517)
T ss_pred CCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEE
Confidence 8 6899999999999998888899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
+.+++..++.+.++|+..++.. .+.++++++++++++++++|..++++++||+|++||++|+.|+
T Consensus 453 g~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 453 GIKDSIRDEAIKAFVVLNEGET--LSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred ccCCCCCCceEEEEEEECCCCC--CCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 9998887888999999887654 6778999999999999999999999999999999999999874
No 56
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.7e-66 Score=543.20 Aligned_cols=501 Identities=26% Similarity=0.358 Sum_probs=422.2
Q ss_pred chHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeec
Q 044926 15 TPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTI 94 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 94 (569)
++.++|++.++.+|+++|+.+.++.+||+||.+++.++|.+|.+.|+.+||+|+++++|+.+++++++||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhh
Q 044926 95 NTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLV 174 (569)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
++..+.+++.++++.++++++|++.+..+.+........ ....++.++....... .......|+++.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 147 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH---DLRTLILVGEPAHASE----------GGGESPSWPKLL 147 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc---ccceEEEecCcccccC----------CccccccHHHhh
Confidence 999999999999999999999998876665544433322 1344555543321110 011123445444
Q ss_pred hcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHH
Q 044926 175 AKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAA 254 (569)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~ 254 (569)
...... ...+...+++++++|||||||.||+|.+||+++...+......+++..+|++++..|++|.+++...+.++.
T Consensus 148 ~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~ 225 (515)
T TIGR03098 148 ALGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFY 225 (515)
T ss_pred cccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHH
Confidence 332211 112234578999999999999999999999999988888777888899999999999999999988889999
Q ss_pred hCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-c-CCe
Q 044926 255 VGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES-L-GFK 332 (569)
Q Consensus 255 ~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~-~-~~~ 332 (569)
.|+++++.+.+++..+++.++++++|++.++|+++..+.+..... .... ++|.++++|+++++.+.+.+++ + ++.
T Consensus 226 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~--~l~~~~~~g~~l~~~~~~~~~~~~~~~~ 302 (515)
T TIGR03098 226 VGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPE-SAAP--SLRYLTNSGGAMPRATLSRLRSFLPNAR 302 (515)
T ss_pred cCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCC-CCcc--ceEEEEecCCcCCHHHHHHHHHHCCCCe
Confidence 999999988899999999999999999999999999998753221 2333 8999999999999999999884 5 789
Q ss_pred eeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccc
Q 044926 333 VSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGY 412 (569)
Q Consensus 333 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy 412 (569)
+++.||+||++....... .........+|.+.+++ +++|+|+ ++..++.+ +.|||+++|+.++.||
T Consensus 303 ~~~~YG~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy 368 (515)
T TIGR03098 303 LFLMYGLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGY 368 (515)
T ss_pred EeeeeccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccc
Confidence 999999999875443211 11122345789999998 9999996 67777766 8999999999999999
Q ss_pred cCCccccccccCC-----------CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 413 LKDPIGTRKCMTD-----------DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 413 ~~~~~~~~~~~~~-----------~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
++++..+...|.. ++||+|||+|++++||++++.||.+|+|+.+|.+|+|.+||+++.++|.|.+++|+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 448 (515)
T TIGR03098 369 WNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAF 448 (515)
T ss_pred cCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEE
Confidence 9998877665532 34899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHH
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~ 549 (569)
+.+++..|+.++++++..++.. .+.++++++++++++++++|..++++++||+|.+||++|++|++
T Consensus 449 ~~~~~~~g~~~~~~~~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 449 GVPDPTLGQAIVLVVTPPGGEE--LDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred eccCcccCceEEEEEEeCCCCC--CCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999888999988888765544 67889999999999999999999999999999999999999974
No 57
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=4.6e-66 Score=543.05 Aligned_cols=504 Identities=23% Similarity=0.337 Sum_probs=418.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
|...++.++|+++++ |+++|+++.++.+||+||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 22 ~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v 99 (536)
T PRK10946 22 WQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVA 99 (536)
T ss_pred ecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeE
Confidence 667899999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCc
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSR-----ALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQ 165 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (569)
++++.+.....++.++++.++++.++++.... ........... ....+.+.....
T Consensus 100 ~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~---------------- 159 (536)
T PRK10946 100 PVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHS----SLRVVLLLNDDG---------------- 159 (536)
T ss_pred EecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCC----CceEEEEecCCC----------------
Confidence 88877778888899999999999999986531 11111211111 122222222100
Q ss_pred ccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhh
Q 044926 166 FFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g 245 (569)
...+.+++....... ......++++++++|||||||.||+|.++|+++...+......+++..+|++++..|++|.++
T Consensus 160 -~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~ 237 (536)
T PRK10946 160 -EHSLDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYP 237 (536)
T ss_pred -CccHHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCcccccc
Confidence 122333333322211 122345789999999999999999999999999998888888889999999999999999988
Q ss_pred hhH--HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHH
Q 044926 246 WCF--PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVL 323 (569)
Q Consensus 246 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~ 323 (569)
+.. .+.++..|+++++.+.+++..++++++++++|++.++|.++..+++..........+.+++.+++||+++++.+.
T Consensus 238 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~ 317 (536)
T PRK10946 238 MSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLA 317 (536)
T ss_pred chhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHH
Confidence 764 577788999998888889999999999999999999999999998764332222233489999999999999999
Q ss_pred HHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCccc-ccceeeEEeCCCCCcccCCCCCceeEE
Q 044926 324 LRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKT-TALTEVDVLDPKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 324 ~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gel 401 (569)
+.+. .+++++++.||+||++.... .... .......++|.|+ +++ .++|+|+ +++.++.| +.|||
T Consensus 318 ~~~~~~~g~~~~~~YG~tE~~~~~~-~~~~---------~~~~~~~~~G~p~~~~~-~v~i~d~-~~~~~~~g--~~Gel 383 (536)
T PRK10946 318 RRIPAELGCQLQQVFGMAEGLVNYT-RLDD---------SDERIFTTQGRPMSPDD-EVWVADA-DGNPLPQG--EVGRL 383 (536)
T ss_pred HHHHHhcCCeEEEeecccccceeee-cCCC---------ccccccccCCcccCCCc-eEEEECC-CCCCCCCC--CccEE
Confidence 9987 57999999999999643322 1111 1112345788888 455 8999996 67888877 89999
Q ss_pred EEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
+++|+.++.||+++++.+...|..++||+|||+|++++||++++.||.+|+++.+|+++++.+||..|.++++|.+++++
T Consensus 384 ~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~ 463 (536)
T PRK10946 384 MTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALV 463 (536)
T ss_pred EEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEE
Confidence 99999999999999999999898799999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc-CCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCC
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR-LPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
+.+++..|+.++++++..++ ...+++++++++. ++.|++|..++++++||+|++||++|++|++++.+...
T Consensus 464 ~~~~~~~g~~~~a~vv~~~~----~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~~ 535 (536)
T PRK10946 464 SMEDELMGEKSCAFLVVKEP----LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRAS 535 (536)
T ss_pred cCCCcccCceEEEEEEeCCC----CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhcc
Confidence 99998888888999887654 5678999999886 99999999999999999999999999999999887653
No 58
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.4e-67 Score=555.33 Aligned_cols=519 Identities=17% Similarity=0.195 Sum_probs=398.9
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeC--C---eeeeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcCC
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYN--N---ITYTWSDTHHRCLQLASSLLSI---GISRG-----------HVVSVVSPN 73 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~--~---~~~Ty~el~~~v~~~A~~L~~~---g~~~g-----------d~V~i~~~n 73 (569)
.-|+.++|.++++.+|+++|+.+. + +.+||+||.++++++|.+|.+. |+++| |+|+|+++|
T Consensus 60 ~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 60 YKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred cchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 568999999999999999999873 2 6899999999999999999974 99998 999999999
Q ss_pred chHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCccccc
Q 044926 74 VPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVS 153 (569)
Q Consensus 74 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (569)
+++|+++++||+++|++.||+++.++.+++.++|++++++++|++.+..+.+.+.....+. ++.++.++........
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~---l~~ii~~~~~~~~~~~ 216 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPH---LKKLIILDTLIKSKEI 216 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCC---ceEEEEECCCCccccc
Confidence 9999999999999999999999999999999999999999999987777666555443332 4667776542110000
Q ss_pred c-------------cCCCC-----------------------CC----------------CCCcccchhhHhhhcCCCCc
Q 044926 154 S-------------QSHHP-----------------------NI----------------SDDQFFSTYESLVAKGDPEF 181 (569)
Q Consensus 154 ~-------------~~~~~-----------------------~~----------------~~~~~~~~~~~~~~~~~~~~ 181 (569)
. ..... .. ..+.....++++.+.... .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 295 (746)
T PTZ00342 217 NINKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT-N 295 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc-C
Confidence 0 00000 00 000011123333222111 1
Q ss_pred ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC--CCCCCCEEEEecCchhhhhhhHHHHHHHhCceE
Q 044926 182 EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW--SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTN 259 (569)
Q Consensus 182 ~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~ 259 (569)
....+..++|++.|+|||||||.||||++||++++..+....... .....|++++.+|++|++++...+.+++.|+++
T Consensus 296 ~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i 375 (746)
T PTZ00342 296 YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTI 375 (746)
T ss_pred CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEE
Confidence 112235678999999999999999999999999988776544321 223568999999999999998878888899998
Q ss_pred EEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcC--------CCCCC-------------------------------
Q 044926 260 ICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNY--------RDPDK------------------------------- 300 (569)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~--------~~~~~------------------------------- 300 (569)
++.+. ++..+++.|.+++||+++++|.+++.|.+. ....+
T Consensus 376 ~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 376 NIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 88765 899999999999999999999999988752 10000
Q ss_pred --CCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCccc-cc
Q 044926 301 --KPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKT-TA 376 (569)
Q Consensus 301 --~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 376 (569)
..+ .+++|.+++||+++++++.+.++ .+|++++++||+||+++.++..... .....++|.|. ++
T Consensus 455 ir~~l-g~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~gsvG~p~~pg 522 (746)
T PTZ00342 455 IKDKV-NPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTESIGGPISPN 522 (746)
T ss_pred HHHhh-CCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcccccCcCCCc
Confidence 000 14899999999999999999998 5799999999999997665543211 12346889998 88
Q ss_pred ceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEE-e
Q 044926 377 LTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVII-S 455 (569)
Q Consensus 377 ~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~-~ 455 (569)
+ +++|+|.+++.....+ ..|||+++||+++.|||++|+.|...|..+|||+|||+|++++||++++.||.+|+|| .
T Consensus 523 ~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls 599 (746)
T PTZ00342 523 T-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLS 599 (746)
T ss_pred E-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeC
Confidence 7 9999986544333333 4699999999999999999999999998899999999999999999999999999999 5
Q ss_pred CceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCC----------------CCCCC----------HH
Q 044926 456 GGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGS----------------KSKPT----------EK 509 (569)
Q Consensus 456 ~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~----------------~~~~~----------~~ 509 (569)
+|++|+|.+||+++.++|.|.+++|++.+.. ..++++|++.... ..... ..
T Consensus 600 ~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 676 (746)
T PTZ00342 600 QGEYIETDMLNNLYSQISFINFCVVYGDDSM---DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNN 676 (746)
T ss_pred CCEEEchHHHHHHHhcCCCccEEEEEccCCc---cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccH
Confidence 8999999999999999999999999997432 3577888765410 00000 01
Q ss_pred HHHH----HH-----hccCCCCccccEEEEec-cc----CCCCCCcccHHHHHHHHHhc
Q 044926 510 EMIE----YC-----RGRLPHYMVPKTVVFMD-EL----PKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 510 ~l~~----~l-----~~~l~~~~~p~~~~~~~-~i----P~t~~GKi~r~~l~~~~~~~ 554 (569)
++++ .+ +..|..+.+++.|.++. ++ -+|++-|+.|+.+.+.|+..
T Consensus 677 ~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~ 735 (746)
T PTZ00342 677 IYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFF 735 (746)
T ss_pred HHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHH
Confidence 1122 22 23688999999888874 33 28999999999999988854
No 59
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-65 Score=542.37 Aligned_cols=513 Identities=28% Similarity=0.452 Sum_probs=420.3
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIY--NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~--~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
...|+.++|.+.++++|+++|+++ .++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 16 ~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~ 95 (558)
T PRK12583 16 LTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGA 95 (558)
T ss_pred ccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCC
Confidence 456899999999999999999988 457899999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHHHHHhcCCC-------CC---CCCCEEEEeCCCcccccc
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSR-----ALVREAVSLFPP-------DL---KPPPLVLISDDDDAAVSS 154 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~ 154 (569)
+++++++..+.+++.+++++++++++|+++... ..+.+....... .. ....++........
T Consensus 96 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 171 (558)
T PRK12583 96 ILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPP---- 171 (558)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCc----
Confidence 999999999999999999999999999986532 112222111100 00 01122222111100
Q ss_pred cCCCCCCCCCcccchhhHhhhcCCCC-----cccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCC
Q 044926 155 QSHHPNISDDQFFSTYESLVAKGDPE-----FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVP 229 (569)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~ 229 (569)
....+++........ ........++++++++|||||||.||+|.++|+++..++......+++.
T Consensus 172 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 240 (558)
T PRK12583 172 -----------GFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLT 240 (558)
T ss_pred -----------cccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCC
Confidence 012333333222111 1111224567899999999999999999999999998888888888999
Q ss_pred CCCEEEEecCchhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCC
Q 044926 230 TQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAK 307 (569)
Q Consensus 230 ~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~ 307 (569)
.+|++++..|++|.+|... .+.++..|+++++.. .+++..+++.++++++|++.++|+++..+.+.......++. +
T Consensus 241 ~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~--~ 318 (558)
T PRK12583 241 EHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLS--S 318 (558)
T ss_pred CCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCch--h
Confidence 9999999999999999876 455566677766543 57899999999999999999999999988876544444444 9
Q ss_pred CceEEEeCCCCcHHHHHHHH-hcC-CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCC
Q 044926 308 PVHLVTAGAPPPAAVLLRTE-SLG-FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDP 385 (569)
Q Consensus 308 l~~~~~~g~~l~~~~~~~~~-~~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~ 385 (569)
+|.+++||+++++.+.+++. +++ ..+++.||+||+++++..+..... ......++|.|.++. .++|+|+
T Consensus 319 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~d~ 389 (558)
T PRK12583 319 LRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVVDP 389 (558)
T ss_pred heEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEECC
Confidence 99999999999999999887 554 579999999999887665432211 112345789999998 9999998
Q ss_pred CCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHH
Q 044926 386 KSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEV 465 (569)
Q Consensus 386 ~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~i 465 (569)
+ +..++.| +.|||+++|+.++.||++++..+...+..++||+|||+|++++||++++.||.+|+|+++|.+|++.+|
T Consensus 390 ~-~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~I 466 (558)
T PRK12583 390 D-GATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREI 466 (558)
T ss_pred C-CCCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHH
Confidence 6 8888877 899999999999999999999888877668999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHH
Q 044926 466 ESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKF 545 (569)
Q Consensus 466 E~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~ 545 (569)
|+.|.++++|.+++|++.+++..++.++++++..++.. ...++++++++++|+.+++|..++++++||+|++||++|+
T Consensus 467 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~ 544 (558)
T PRK12583 467 EEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHA--ASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKF 544 (558)
T ss_pred HHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCC--CCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHH
Confidence 99999999999999999998887888899998876654 5778999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 044926 546 VLREIAENMG 555 (569)
Q Consensus 546 ~l~~~~~~~~ 555 (569)
+|+++..+..
T Consensus 545 ~L~~~~~~~~ 554 (558)
T PRK12583 545 RMREISIEEL 554 (558)
T ss_pred HHHHHHHhhc
Confidence 9999876643
No 60
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-66 Score=562.71 Aligned_cols=477 Identities=23% Similarity=0.308 Sum_probs=396.6
Q ss_pred chHHHHHHHHHH--cCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 15 TPLVFLERAATV--YGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 15 tl~~~l~~~a~~--~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
|+.++|.+++.. +||++|++.. +.+||+||+++++++|..|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 789999999886 7999999875 4899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|++|.++.+++.+++++++++++|++.+..+.+.. ..+. . ..+
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~-----------~~~~--~------------------------~~~ 126 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQP-----------SRVA--E------------------------AAE 126 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc-----------cccc--h------------------------hhh
Confidence 99999999999999999999999998654432211 0000 0 000
Q ss_pred hhhcCC-CCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhh-ccCCCCCCCEEEEecCchhhhhhhH-H
Q 044926 173 LVAKGD-PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTL-SDWSVPTQPVYLWTLPMFHSNGWCF-P 249 (569)
Q Consensus 173 ~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~-~~~~~~~~d~~~~~~pl~~~~g~~~-~ 249 (569)
++.... .......+..++++++++|||||||.||+|.++|+++........ ..+++...|++++..|++|.+++.. .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 206 (705)
T PRK06060 127 LMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSV 206 (705)
T ss_pred hhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHH
Confidence 000000 000011124567899999999999999999999999987765553 4577889999999999999988754 5
Q ss_pred HHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-
Q 044926 250 WAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE- 327 (569)
Q Consensus 250 ~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~- 327 (569)
+.++..|+++++.+ .+++..++..+.++++|+++++|+++..+++.... ..++ ++|.+++||+++++++.+++.
T Consensus 207 ~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~--slr~i~~gGe~l~~~~~~~~~~ 282 (705)
T PRK06060 207 WFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP--DSFR--SLRCVVSAGEALELGLAERLME 282 (705)
T ss_pred HHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc--cccc--ceeEEEEecCcCCHHHHHHHHH
Confidence 67788899988876 47888999999999999999999999999875432 2334 899999999999999999887
Q ss_pred hc-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecC
Q 044926 328 SL-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGG 406 (569)
Q Consensus 328 ~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 406 (569)
.+ ++++++.||+||++..+..+... .....++|.|.+++ +++|+|+ ++..++.| +.||||++|+
T Consensus 283 ~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~-~g~~~~~g--~~GEl~i~g~ 347 (705)
T PRK06060 283 FFGGIPILDGIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAP-DGTTAGPG--VEGDLWVRGP 347 (705)
T ss_pred HcCCCceEeeeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEccc
Confidence 45 58999999999997655433211 11235689999998 9999998 57777777 8999999999
Q ss_pred cccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCC
Q 044926 407 CIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDE 486 (569)
Q Consensus 407 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~ 486 (569)
.++.||+++++.+. ..++||+|||+|++++||++++.||.+|+||++|++|++.+||.+|.+++.|.+++|++.+++
T Consensus 348 ~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~ 424 (705)
T PRK06060 348 AIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRES 424 (705)
T ss_pred hhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCc
Confidence 99999999987643 347899999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEecCCCCC-CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHH
Q 044926 487 FWGETPCAFVSLKEGSKS-KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 551 (569)
Q Consensus 487 ~~~~~~~~~v~~~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~ 551 (569)
..++.++++|+..++... .....+++++++++|+.|++|..++++++||+|++||++|++|++.+
T Consensus 425 ~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 425 TGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred cCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 878888999887655331 11235788999999999999999999999999999999999999875
No 61
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-66 Score=556.72 Aligned_cols=517 Identities=20% Similarity=0.252 Sum_probs=396.7
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeC-------C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYN-------N--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFA 83 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~-------~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 83 (569)
..|+.++|.++++.+|+++|+... + +.+||+||.++++++|.+|.+.|+++||+|+|+++|+++|+++++|
T Consensus 42 ~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 121 (660)
T PLN02861 42 IDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (660)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 358999999999999999999641 1 4799999999999999999999999999999999999999999999
Q ss_pred hhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCC
Q 044926 84 VPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISD 163 (569)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (569)
|+++|+++||+++.++.+++.+++++++++++|++.+..+.+......... .++.++.+++...... .. . ...
T Consensus 122 ~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~--~~--~-~~~ 194 (660)
T PLN02861 122 CNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSS--NLKTIVSFGDVSSEQK--EE--A-EEL 194 (660)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCC--CCEEEEEECCCChhhh--hh--h-hcC
Confidence 999999999999999999999999999999999987655544433322211 1345555543211000 00 0 000
Q ss_pred CcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC-----CCCCCEEEEec
Q 044926 164 DQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS-----VPTQPVYLWTL 238 (569)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~-----~~~~d~~~~~~ 238 (569)
......+.+++....... ...+..++|+++|+|||||||.||||.+||++++..+......++ +..+|++++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~l 273 (660)
T PLN02861 195 GVSCFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYL 273 (660)
T ss_pred CcEEEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEEC
Confidence 111245666554332211 112346789999999999999999999999999887766554443 46789999999
Q ss_pred CchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCC---------------------
Q 044926 239 PMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRD--------------------- 297 (569)
Q Consensus 239 pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~--------------------- 297 (569)
|++|.+++...+.+++.|+++++. ..++..+++.|++++||+++++|.++..+.+...
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~ 352 (660)
T PLN02861 274 PLAHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999987766678888888776 4689999999999999999999999998864100
Q ss_pred --------CC---CCCC----------Cc-CCCceEEEeCCCCcHHHHHHHHhcC-Ceeeecccccccccceeecccccc
Q 044926 298 --------PD---KKPL----------KL-AKPVHLVTAGAPPPAAVLLRTESLG-FKVSHGYGLTETGGIVVSCAWKRN 354 (569)
Q Consensus 298 --------~~---~~~~----------~~-~~l~~~~~~g~~l~~~~~~~~~~~~-~~i~~~YG~tE~~~~~~~~~~~~~ 354 (569)
.. .... .+ +++|.+++||+++++++.+.++.++ ..++++||+||+++.++.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~-- 430 (660)
T PLN02861 353 LGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN-- 430 (660)
T ss_pred HHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc--
Confidence 00 0000 01 3789999999999999866555565 4799999999997655432111
Q ss_pred cccCcHHHHhhhhcccCcccccceeeEEeCC-CCCc-ccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeec
Q 044926 355 WNLLPAAEKAKLKARQGVKTTALTEVDVLDP-KSGV-SAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTG 432 (569)
Q Consensus 355 ~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~-~~~~-~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TG 432 (569)
......++|.|.+++ +++|+|. +.|. ....+ +.|||+++||+++.|||++|+.+...|. +|||+||
T Consensus 431 --------~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TG 498 (660)
T PLN02861 431 --------VFSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLI-DGWFHTG 498 (660)
T ss_pred --------cCCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhh-ccCcccC
Confidence 011235789999998 9999983 3332 22223 5799999999999999999999999996 8999999
Q ss_pred ceEEEecCCcEEEeccCCCeEEe-CceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCC------CC-
Q 044926 433 DVGVMHSDGYLEIKDRSKDVIIS-GGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGS------KS- 504 (569)
Q Consensus 433 D~~~~~~dg~l~~~GR~~~~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~------~~- 504 (569)
|+|++|+||++++.||.+|+||. +|++|+|.+||++|.++|.|.+++|++.+. ++.++++|++.... ..
T Consensus 499 Dlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~~~~l~~~~~~~~ 575 (660)
T PLN02861 499 DIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPDRQALEDWAANNN 575 (660)
T ss_pred ceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcCHHHHHHHHHHcC
Confidence 99999999999999999999995 899999999999999999999999999863 45688888875320 00
Q ss_pred -CCCH----------HHHHHHHhc-----cCCCCccccEEEEec-cc-----CCCCCCcccHHHHHHHHHhcC
Q 044926 505 -KPTE----------KEMIEYCRG-----RLPHYMVPKTVVFMD-EL-----PKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 505 -~~~~----------~~l~~~l~~-----~l~~~~~p~~~~~~~-~i-----P~t~~GKi~r~~l~~~~~~~~ 555 (569)
.... ..+.+.+++ .++.+..++.+.+++ .+ .+|+++|+.|+.+.+.|++..
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I 648 (660)
T PLN02861 576 KTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCI 648 (660)
T ss_pred CCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHH
Confidence 0011 224444432 488899999888865 56 799999999999999988754
No 62
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-66 Score=554.88 Aligned_cols=510 Identities=21% Similarity=0.259 Sum_probs=403.9
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNN---------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~---------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
...|+.++|+++++.+|+++|+++.+ +.+||+||.++++++|.+|.+. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 44789999999999999999998732 5799999999999999999987 8999999999999999999999
Q ss_pred HhhhccceEeec-cCCCC--HHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 83 AVPFAAAVLNTI-NTRLD--ARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 83 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
||+++|++++|+ ++..+ .+++.+++++++++++|++.+..+.+........... ...++.++....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------- 166 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKE-RPRVIAVDAVPD---------- 166 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccc-cceEEEcccccc----------
Confidence 999999999999 55554 6789999999999999999876655544332221100 123332221100
Q ss_pred CCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecC
Q 044926 160 NISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLP 239 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p 239 (569)
. ... . ....+..++++++|+|||||||.||||.++|+++...+......+++..+|++++.+|
T Consensus 167 ---------~----~~~---~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~P 229 (631)
T PRK07769 167 ---------E----VGA---T-WVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLP 229 (631)
T ss_pred ---------c----ccc---c-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCC
Confidence 0 000 0 0001245679999999999999999999999999988877777788899999999999
Q ss_pred chhhhhhhHHHHHHHhCceEEEecc--C--CHHHHHHHHHHhCc---ceeechhHHHHHHHcC---CCCCCCCCCcCCCc
Q 044926 240 MFHSNGWCFPWAMAAVGGTNICIRK--F--DASIIFDLIRRHGV---THMCGAPVVLNMLSNY---RDPDKKPLKLAKPV 309 (569)
Q Consensus 240 l~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~l~~~~~---t~~~~~P~~l~~l~~~---~~~~~~~~~~~~l~ 309 (569)
++|.+|+...+.+++.|++++++++ + ++..+++.+.++++ +++..+|.++..+... .........++++|
T Consensus 230 l~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr 309 (631)
T PRK07769 230 FFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVK 309 (631)
T ss_pred CcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhhee
Confidence 9999999887788888999888753 4 88999999999886 7889999887766543 11111122344999
Q ss_pred eEEEeCCCCcHHHHHHHHh-c---C---Ceeeecccccccccceeeccccccccc--CcHHH-------------H-hhh
Q 044926 310 HLVTAGAPPPAAVLLRTES-L---G---FKVSHGYGLTETGGIVVSCAWKRNWNL--LPAAE-------------K-AKL 366 (569)
Q Consensus 310 ~~~~~g~~l~~~~~~~~~~-~---~---~~i~~~YG~tE~~~~~~~~~~~~~~~~--~~~~~-------------~-~~~ 366 (569)
.+++||+++++++.+++.+ + | ..+++.||+||+++.+........... ..... . ...
T Consensus 310 ~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 389 (631)
T PRK07769 310 GLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVA 389 (631)
T ss_pred eEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCcee
Confidence 9999999999999998874 4 3 359999999998765554322111000 00000 0 011
Q ss_pred hcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCC-----------------CCee
Q 044926 367 KARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTD-----------------DGWF 429 (569)
Q Consensus 367 ~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------------~~~~ 429 (569)
..++|.+.++. .++|+|++++..++.| +.|||+++||+++.||+++++.+...|.. ++||
T Consensus 390 ~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~ 466 (631)
T PRK07769 390 QVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWV 466 (631)
T ss_pred EEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCee
Confidence 24789999888 9999998888888887 89999999999999999999988877742 4899
Q ss_pred eecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHc-CCCcce--eEEEecCC-------------------CC
Q 044926 430 YTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYS-NPAVNE--AAVVARPD-------------------EF 487 (569)
Q Consensus 430 ~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~-~~~i~~--~~v~~~~~-------------------~~ 487 (569)
+|||+|+++ ||+++++||.+|+||++|++|+|.+||++|.+ ||.|.+ ++|++.++ +.
T Consensus 467 ~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~ 545 (631)
T PRK07769 467 RTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPED 545 (631)
T ss_pred eccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCC
Confidence 999999995 99999999999999999999999999999996 899998 88888887 55
Q ss_pred CCceeEEEEEecCCCCCCCCHHHHHHHHhccCCC-Cc-cccEEEEec--ccCCCCCCcccHHHHHHHHHhcC
Q 044926 488 WGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPH-YM-VPKTVVFMD--ELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 488 ~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~-~~-~p~~~~~~~--~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+|+.++++|++.++.. ..+.++|.+++++++.. +. .|..+++++ +||+|++|||+|++|++.+.+..
T Consensus 546 ~ge~~~a~v~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~ 616 (631)
T PRK07769 546 TSEQLVIVAERAPGAH-KLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGS 616 (631)
T ss_pred CCccEEEEEEecCccc-cccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCC
Confidence 7888999999887632 15778999999999985 56 588888886 69999999999999999887654
No 63
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.1e-66 Score=536.29 Aligned_cols=480 Identities=28% Similarity=0.383 Sum_probs=401.9
Q ss_pred HHHHHHcCCCCeEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCC
Q 044926 21 ERAATVYGDSPSIIY--NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRL 98 (569)
Q Consensus 21 ~~~a~~~p~~~al~~--~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (569)
+.++..+||++|+.+ .++.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 457788999999987 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCC
Q 044926 99 DARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGD 178 (569)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
+.+++.+++++++++++|+++...... ...+ .++++.....
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~-------------~~~~--------------------------~~~~~~~~~~ 122 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGR-------------TDVE--------------------------DLAAFIASAD 122 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhccc-------------cccc--------------------------chhhhhhhcc
Confidence 999999999999999999986532200 0000 0011100000
Q ss_pred CC-cccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHH-HHHHhC
Q 044926 179 PE-FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPW-AMAAVG 256 (569)
Q Consensus 179 ~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~-~~~~~g 256 (569)
.. .........+++++++|||||||.||+|.++|+++...+........+..+|++++..|++|.+++...+ ..+..|
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g 202 (488)
T PRK09088 123 ALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVG 202 (488)
T ss_pred ccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcC
Confidence 00 0001123457899999999999999999999999988777777667788999999999999999987644 456677
Q ss_pred ceEEEeccCCHHHHHHHHH--HhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCeee
Q 044926 257 GTNICIRKFDASIIFDLIR--RHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVS 334 (569)
Q Consensus 257 ~~~~~~~~~~~~~~~~~l~--~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i~ 334 (569)
+++++.+.+++..++..+. ++++|+++++|.++..+.+........++ +++.+++||++++....+.+.+.+++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~l~~~~~gG~~~~~~~~~~~~~~g~~v~ 280 (488)
T PRK09088 203 GSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALR--HLTALFTGGAPHAAEDILGWLDDGIPMV 280 (488)
T ss_pred CEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccc--cceEEEecCCCCCHHHHHHHHHhCCcee
Confidence 7777777788999998886 48999999999999999876543344444 8999999999999988888776689999
Q ss_pred ecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccC
Q 044926 335 HGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLK 414 (569)
Q Consensus 335 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~ 414 (569)
+.||+||++++......+ ........++|.+.+++ +++|+|+ ++..++.+ +.|||+++|++++.||++
T Consensus 281 ~~YG~TE~~~~~~~~~~~--------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~ 348 (488)
T PRK09088 281 DGFGMSEAGTVFGMSVDC--------DVIRAKAGAAGIPTPTV-QTRVVDD-QGNDCPAG--VPGELLLRGPNLSPGYWR 348 (488)
T ss_pred eeecccccccccccCCCc--------ccccccCCccccCCCCc-EEEEECC-CCCCCcCC--CceEEEEECCccchhhcC
Confidence 999999998654321110 00111235789999998 9999996 67777776 889999999999999999
Q ss_pred CccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEE
Q 044926 415 DPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCA 494 (569)
Q Consensus 415 ~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~ 494 (569)
+++.+...+..++||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||++|.++++|.+++|++.+++..|+..++
T Consensus 349 ~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 428 (488)
T PRK09088 349 RPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYL 428 (488)
T ss_pred ChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEE
Confidence 99988888877899999999999999999999999999999999999999999999999999999999998877888888
Q ss_pred EEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 495 FVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 495 ~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+|++.++.. .+.+++.++++++++.+++|..++++++||+|++||++|++|++++.+..
T Consensus 429 ~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~~ 487 (488)
T PRK09088 429 AIVPADGAP--LDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAGR 487 (488)
T ss_pred EEEECCCCC--CCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhcC
Confidence 888876544 57789999999999999999999999999999999999999999987653
No 64
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-65 Score=537.69 Aligned_cols=509 Identities=27% Similarity=0.365 Sum_probs=426.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.++.|+.++|.++++++|+++|+++.++.+||.||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccc-cHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFH-SRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++++|..+.+++.++++.++++.+++++. .............. ..+++.+..... ...
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------------~~~ 148 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPS---LKHVLTLGPVPD-----------------GVD 148 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCC---ceEEEEeCCccc-----------------hhh
Confidence 999999999999999999999999999876 33333322221111 223333332110 011
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHH
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFP 249 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~ 249 (569)
+.+....... ........++++++++|||||||.||+|.++|.++...+......+++..+|++++..|++|.+++. .
T Consensus 149 ~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~ 226 (524)
T PRK06188 149 LLAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-F 226 (524)
T ss_pred HHHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-H
Confidence 1111111111 1111123455799999999999999999999999999888888888999999999999999998875 4
Q ss_pred HHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-h
Q 044926 250 WAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-S 328 (569)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~ 328 (569)
+..++.|+++++.+.+++..+++.++++++|++.++|+++..+++........+. ++|.+++||+++++.....+. .
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~--~lr~~~~gg~~~~~~~~~~~~~~ 304 (524)
T PRK06188 227 LPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLS--SLETVYYGASPMSPVRLAEAIER 304 (524)
T ss_pred HHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCc--ceeEEEEcCCCCCHHHHHHHHHH
Confidence 6778899999999989999999999999999999999999999988755555555 999999999999999887766 6
Q ss_pred cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcc
Q 044926 329 LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCI 408 (569)
Q Consensus 329 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 408 (569)
++..+++.||+||++..+..+..... .........++|.|.+++ .++|+|+ ++.+++.| +.|||+++|+.+
T Consensus 305 ~~~~~~~~YG~tE~~~~~~~~~~~~~-----~~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~~ 375 (524)
T PRK06188 305 FGPIFAQYYGQTEAPMVITYLRKRDH-----DPDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPLV 375 (524)
T ss_pred hCchhhheeCccccCCceeecCchhc-----cccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcch
Confidence 78889999999999766554322111 001122345689999998 9999997 58888877 899999999999
Q ss_pred cccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCC
Q 044926 409 MLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFW 488 (569)
Q Consensus 409 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~ 488 (569)
+.||++++..+...+. ++||+|||+|++++||.+++.||.+++++.+|++++|.+||.+|.++++|.+++|++.+++..
T Consensus 376 ~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~ 454 (524)
T PRK06188 376 MDGYWNRPEETAEAFR-DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKW 454 (524)
T ss_pred hhhhcCChHHhhhhhc-CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCc
Confidence 9999999988888886 899999999999999999999999999999999999999999999999999999999988887
Q ss_pred CceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 489 GETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 489 ~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
++.+++++++.+... ...+++++++++.++.+++|..++++++||+|++||++|++|+++|.+..
T Consensus 455 ~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~ 519 (524)
T PRK06188 455 GEAVTAVVVLRPGAA--VDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGR 519 (524)
T ss_pred CceEEEEEEECCCCC--CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhc
Confidence 888999998876544 56789999999999999999999999999999999999999999986654
No 65
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-65 Score=549.72 Aligned_cols=512 Identities=19% Similarity=0.189 Sum_probs=396.5
Q ss_pred Cch-HHHHHHHHHHcCCCCeEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 14 LTP-LVFLERAATVYGDSPSIIYNN--------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 14 ~tl-~~~l~~~a~~~p~~~al~~~~--------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
+++ .++|++++..+|+++|+++.+ +.+||+||.++++++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 444 346777666789999999854 37999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccH------HHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCC
Q 044926 85 PFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSR------ALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHH 158 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (569)
+++|++++|++|.++.+++.+++++++++++|+++... +......... ...++++....... .
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~-----~~~~iv~~~~~~~~----~-- 322 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK-----APKAIVLPADGKSV----R-- 322 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc-----CCcEEEEeCCCCcc----c--
Confidence 99999999999999999999999999999999986532 1122221111 12344443221000 0
Q ss_pred CCCCCCcccchhhHhhhcCCCC---c-ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEE
Q 044926 159 PNISDDQFFSTYESLVAKGDPE---F-EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVY 234 (569)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~ 234 (569)
..... ....|++++...... . ........+++++|+|||||||.||||+++|.+++.........+++.++|++
T Consensus 323 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~ 400 (728)
T PLN03052 323 VKLRE--GDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIV 400 (728)
T ss_pred ccccc--CCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEE
Confidence 00000 013466655432111 0 01111345899999999999999999999999987766655556788999999
Q ss_pred EEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEE
Q 044926 235 LWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVT 313 (569)
Q Consensus 235 ~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~ 313 (569)
++..|+.|+++....+.+++.|+++++.+. .++..++++++++++|++.++|+++..|.+.......+++ ++|.+++
T Consensus 401 ~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dls--sLr~i~s 478 (728)
T PLN03052 401 CWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWS--SIRCFGS 478 (728)
T ss_pred EECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChh--heeEEEe
Confidence 999999999998777788999999999864 4567899999999999999999999999876533344444 9999999
Q ss_pred eCCCCcHHHHHHHH-hcC-CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCccc
Q 044926 314 AGAPPPAAVLLRTE-SLG-FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSA 391 (569)
Q Consensus 314 ~g~~l~~~~~~~~~-~~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~ 391 (569)
+|++++++...++. .++ .++++.||+||+++.+...... .......+|.|.++. +++|+|+ +|+++
T Consensus 479 ~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~v~d~-~g~~v 546 (728)
T PLN03052 479 TGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL----------QPQAFAAFSTPAMGC-KLFILDD-SGNPY 546 (728)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCC----------CCCCCCccccCCCCc-eEEEECC-CCCCC
Confidence 99999999887776 344 5799999999997654432110 011235688999999 9999996 78888
Q ss_pred CCCCCceeEEEEecCc--ccccccCCccccccccC------CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHH
Q 044926 392 KRDGSTLGEIVLRGGC--IMLGYLKDPIGTRKCMT------DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSV 463 (569)
Q Consensus 392 ~~~~~~~Gel~v~~~~--~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~ 463 (569)
+.|..+.|||++.++. ...+|+++.. ....|. +..||+|||++++++||+++++||+||+||++|++|++.
T Consensus 547 ~~g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~ 625 (728)
T PLN03052 547 PDDAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSV 625 (728)
T ss_pred CCCCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHH
Confidence 7763347999998652 3356666532 222221 233899999999999999999999999999999999999
Q ss_pred HHHHHHH-cCCCcceeEEEecCCCCCC-ceeEEEEEec--CCCCCCCCHHHHHH----HHhccCCCCccccEEEEecccC
Q 044926 464 EVESVLY-SNPAVNEAAVVARPDEFWG-ETPCAFVSLK--EGSKSKPTEKEMIE----YCRGRLPHYMVPKTVVFMDELP 535 (569)
Q Consensus 464 ~iE~~l~-~~~~i~~~~v~~~~~~~~~-~~~~~~v~~~--~~~~~~~~~~~l~~----~l~~~l~~~~~p~~~~~~~~iP 535 (569)
|||++|. .+|.|.+++|++.+++..| +.++++|++. ++.. .+.++|++ ++++++++++.|..|+++++||
T Consensus 626 EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~--~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP 703 (728)
T PLN03052 626 EIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGSN--PDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFP 703 (728)
T ss_pred HHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCCC--CCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCC
Confidence 9999995 7899999999999988766 7899999987 4433 34445554 5677888999999999999999
Q ss_pred CCCCCcccHHHHHHHHHhcC
Q 044926 536 KTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 536 ~t~~GKi~r~~l~~~~~~~~ 555 (569)
+|.+||++|+.|++++.+..
T Consensus 704 ~T~sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 704 RTASNKVMRRVLRQQLAQEL 723 (728)
T ss_pred CCCchHHHHHHHHHHHHhhh
Confidence 99999999999999887665
No 66
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-64 Score=536.03 Aligned_cols=513 Identities=24% Similarity=0.334 Sum_probs=409.9
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSI-GISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
.++.++|.+++..+|+++|+.+.++.+||.||.++++++|..|.+. |+++||+|+++++|+++++++++||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 5899999999999999999999889999999999999999999985 999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCC-ccccc---c-------cCCCCCC
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDD-DAAVS---S-------QSHHPNI 161 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~-------~~~~~~~ 161 (569)
++++..+.+++.+++++++++++++++.....+........ ...++.....+ ..... . ....+..
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTG----IEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAY 179 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccC----ceEEEeechhhccccccchhccccccccccccccc
Confidence 99999999999999999999999998765544433322110 11111110000 00000 0 0000000
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC---------CCC-C
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS---------VPT-Q 231 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~---------~~~-~ 231 (569)
.. .....+++.............+...+++++++|||||||.||+|.++|+++..+.......+. +.. .
T Consensus 180 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK12492 180 HL-PQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQ 258 (562)
T ss_pred CC-cccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCC
Confidence 00 011334444433222111112345679999999999999999999999999776655444332 223 3
Q ss_pred CEEEEecCchhhhhhhHH-HHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCc
Q 044926 232 PVYLWTLPMFHSNGWCFP-WAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPV 309 (569)
Q Consensus 232 d~~~~~~pl~~~~g~~~~-~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~ 309 (569)
+++++.+|++|.+++... +..+..|+..++.. +.++..+++.++++++|++.++|+++..+.+........+. ++|
T Consensus 259 ~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~lr 336 (562)
T PRK12492 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFS--ALK 336 (562)
T ss_pred eEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccccc--cee
Confidence 567889999999998653 44456677666553 46899999999999999999999999999887654444444 999
Q ss_pred eEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCC
Q 044926 310 HLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSG 388 (569)
Q Consensus 310 ~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~ 388 (569)
.+++||+++++.+.+.++ .+++++++.||+||+++++..+.... ......+|.|.++. .++|+|+ ++
T Consensus 337 ~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~-~~ 404 (562)
T PRK12492 337 LTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDD-DG 404 (562)
T ss_pred EEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECC-CC
Confidence 999999999999999887 56999999999999987665443211 11235789999998 9999997 67
Q ss_pred cccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHH
Q 044926 389 VSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESV 468 (569)
Q Consensus 389 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~ 468 (569)
.+++.| +.|||+++|+.++.||+++++.+...|..++||+|||+|+++++|.+++.||.+|+|+.+|++|++.+||..
T Consensus 405 ~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~ 482 (562)
T PRK12492 405 NELPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDV 482 (562)
T ss_pred CCCCCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHH
Confidence 778777 899999999999999999999998888778999999999999999999999999999999999999999999
Q ss_pred HHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 469 LYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 469 l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
|.+++.|.+++|++.++...++.++++++..+.. ...++++++++++++.+++|..++++++||+|++||++|++|+
T Consensus 483 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~---~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~ 559 (562)
T PRK12492 483 VMAHPKVANCAAIGVPDERSGEAVKLFVVARDPG---LSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELR 559 (562)
T ss_pred HHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC---CCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHH
Confidence 9999999999999999887788888888765432 4678999999999999999999999999999999999999998
Q ss_pred HH
Q 044926 549 EI 550 (569)
Q Consensus 549 ~~ 550 (569)
++
T Consensus 560 ~~ 561 (562)
T PRK12492 560 DI 561 (562)
T ss_pred hh
Confidence 75
No 67
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-65 Score=542.87 Aligned_cols=513 Identities=22% Similarity=0.245 Sum_probs=400.6
Q ss_pred CCCCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q 044926 6 PSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVP 85 (569)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 85 (569)
....+..+.|+.++|.+++..+|+++|+++.++.+||+||.++++++|..|.+.|+++||+|+++++|+.+++++++||+
T Consensus 29 ~~~~~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~ 108 (600)
T PRK08279 29 ALITPDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLA 108 (600)
T ss_pred cccCCCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 33455678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCc
Q 044926 86 FAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQ 165 (569)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (569)
++|++++++++.++.+++.++++.++++++|++.+..+.+.+....... ...+...+...... ..
T Consensus 109 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----------~~ 173 (600)
T PRK08279 109 KLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLAR----PPRLWVAGGDTLDD-----------PE 173 (600)
T ss_pred hcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcc----cceEEEecCccccc-----------cc
Confidence 9999999999999999999999999999999998877766555433221 22233322211000 00
Q ss_pred ccchhhHhhhcCCCC-cccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhh
Q 044926 166 FFSTYESLVAKGDPE-FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSN 244 (569)
Q Consensus 166 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~ 244 (569)
....+.+........ .........+++++++|||||||.||+|.++|+++..++......++++++|++++..|++|.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~ 253 (600)
T PRK08279 174 GYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNT 253 (600)
T ss_pred cHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhh
Confidence 011222211111111 1111234568999999999999999999999999999998888889999999999999999999
Q ss_pred hhhHHHHH-HHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHH
Q 044926 245 GWCFPWAM-AAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVL 323 (569)
Q Consensus 245 g~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~ 323 (569)
++...+.+ +..|+++++.+.+++..+++.++++++|++.++|+++..+.+.......... +++. ++|+.+++.++
T Consensus 254 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~--~l~~--~~g~~l~~~~~ 329 (600)
T PRK08279 254 GGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDH--RLRL--MIGNGLRPDIW 329 (600)
T ss_pred hHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCc--ceeE--EecCCCCHHHH
Confidence 99876554 5566666776779999999999999999999999999999876543333332 5664 34778999999
Q ss_pred HHHH-hcCC-eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccc----cceeeEEeCCCC--------Cc
Q 044926 324 LRTE-SLGF-KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTT----ALTEVDVLDPKS--------GV 389 (569)
Q Consensus 324 ~~~~-~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~i~d~~~--------~~ 389 (569)
+++. .++. .+++.||+||++..+.... ....++|.+.. +. .+...+.+. +.
T Consensus 330 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~--------------~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~ 394 (600)
T PRK08279 330 DEFQQRFGIPRILEFYAASEGNVGFINVF--------------NFDGTVGRVPLWLAHPY-AIVKYDVDTGEPVRDADGR 394 (600)
T ss_pred HHHHHHhCcceeeeeecccccceeecccC--------------CCCcccccccccccccc-eeeeeccCcCceeeCCCCc
Confidence 8887 5665 5999999999875332110 01123444333 22 222222212 22
Q ss_pred --ccCCCCCceeEEE--EecCcccccccCCccccccccC------CCCeeeecceEEEecCCcEEEeccCCCeEEeCcee
Q 044926 390 --SAKRDGSTLGEIV--LRGGCIMLGYLKDPIGTRKCMT------DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGEN 459 (569)
Q Consensus 390 --~~~~~~~~~Gel~--v~~~~~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~ 459 (569)
.++.+ +.|||+ +.|+.++.|| +++..+...|. .++||+|||+|++++||.+++.||.+|+||++|++
T Consensus 395 ~~~~~~g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~ 471 (600)
T PRK08279 395 CIKVKPG--EVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGEN 471 (600)
T ss_pred cccCCCC--CceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcc
Confidence 23444 789998 7799999999 88777765542 35799999999999999999999999999999999
Q ss_pred eeHHHHHHHHHcCCCcceeEEEecCCCCC-CceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCC
Q 044926 460 LSSVEVESVLYSNPAVNEAAVVARPDEFW-GETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTS 538 (569)
Q Consensus 460 v~~~~iE~~l~~~~~i~~~~v~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~ 538 (569)
|+|.+||+.|.++|+|.+|+|++.+.+.. +...+++++..++.. .+.++++++++++|+.|++|..++++++||+|.
T Consensus 472 i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~--~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~ 549 (600)
T PRK08279 472 VATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAE--FDLAALAAHLYERLPAYAVPLFVRLVPELETTG 549 (600)
T ss_pred cCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCcc--CCHHHHHHHHHhhCccccCCeEEEeecCCCCCc
Confidence 99999999999999999999999876543 344556666554433 678999999999999999999999999999999
Q ss_pred CCcccHHHHHHHHHhcCCC
Q 044926 539 TGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 539 ~GKi~r~~l~~~~~~~~~~ 557 (569)
+||++|++|++++.+....
T Consensus 550 ~GKi~r~~L~~~~~~~~~~ 568 (600)
T PRK08279 550 TFKYRKVDLRKEGFDPSKV 568 (600)
T ss_pred chhhhHHHHhhcCCCcccc
Confidence 9999999999988887433
No 68
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.7e-65 Score=554.81 Aligned_cols=499 Identities=20% Similarity=0.294 Sum_probs=395.5
Q ss_pred CCCchHHHHHHHHHHcCC-CCeEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 12 TPLTPLVFLERAATVYGD-SPSIIYNN-ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~-~~al~~~~-~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
+..|+.++|.++++++|+ ++|+.+.+ +.+||+||.++++++|.+|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 567899999999999998 57877633 7899999999999999999987 59999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|+++.++.+++.+++++++++++|++.+..+... . ............+.+.+... . ... ......
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~-~-~~~~~~~~~~~~i~~~~~~~-~-------~~~--~~~~~~ 348 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGK-L-WHLPEQLTQVRWVYLEDLKD-D-------VTT--ADKLWI 348 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhcc-C-CChhhhhccccEEEhhhhhh-h-------cch--hHHHHH
Confidence 9999999999999999999999999999876543210 0 00000000012222221100 0 000 000000
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF- 248 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~- 248 (569)
..+.... . .......++|+++++|||||||.||||.++|+++..........++++.+|++++.+|++|.+++..
T Consensus 349 ~~~~~~~---~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~ 424 (718)
T PRK08043 349 FAHLLMP---R-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVG 424 (718)
T ss_pred HHHHhCC---c-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHH
Confidence 0000000 0 0011245689999999999999999999999999988887777788999999999999999999865
Q ss_pred HHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH
Q 044926 249 PWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE 327 (569)
Q Consensus 249 ~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~ 327 (569)
.+.++..|+++++.+. +++..+++.+.++++|++.++|+++..+.+.. ...+++ ++|.+++||+++++++.+.++
T Consensus 425 ~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~--~lr~i~~gg~~l~~~~~~~~~ 500 (718)
T PRK08043 425 LFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFA--RLRYVVAGAEKLQESTKQLWQ 500 (718)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--Cccccc--ceEEEEEeCccCCHHHHHHHH
Confidence 5677888999888764 57788899999999999999999998887642 222334 899999999999999999888
Q ss_pred -hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecC
Q 044926 328 -SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGG 406 (569)
Q Consensus 328 -~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 406 (569)
.+++++++.||+||+++.+...... .....++|.|.++. +++|+|.+ +. + +.|||+++|+
T Consensus 501 ~~~g~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~~~i~d~~-~~----~--~~Gel~v~g~ 561 (718)
T PRK08043 501 DKFGLRILEGYGVTECAPVVSINVPM-----------AAKPGTVGRILPGM-DARLLSVP-GI----E--QGGRLQLKGP 561 (718)
T ss_pred HHcCCCeecccCcccccceEEecCCc-----------ccCCCCCCCcCCCC-eeEEecCC-CC----C--CceEEEEecC
Confidence 5799999999999997665432110 11346899999998 99999863 31 2 5699999999
Q ss_pred cccccccCC--ccc-------cccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcce
Q 044926 407 CIMLGYLKD--PIG-------TRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNE 477 (569)
Q Consensus 407 ~~~~gy~~~--~~~-------~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~ 477 (569)
+++.||+++ ++. +...+..+|||+|||+|++++||++++.||.+|+|+++|++|+|.+||+++.+++.+.+
T Consensus 562 ~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~ 641 (718)
T PRK08043 562 NIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQ 641 (718)
T ss_pred CccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccce
Confidence 999999984 332 11122347899999999999999999999999999999999999999999999998999
Q ss_pred eEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc-CCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 478 AAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR-LPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 478 ~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
++|++.+++.+|+.+++++. +.. .+.++++++++++ ++.|++|..++++++||+|++||++|++|++++.+.+
T Consensus 642 ~avv~~~~~~~ge~~v~~~~---~~~--~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 715 (718)
T PRK08043 642 HATAIKSDASKGEALVLFTT---DSE--LTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDEPE 715 (718)
T ss_pred EEEEEccCCCCCceEEEEEc---Ccc--cCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhccc
Confidence 99999988888887777653 222 5678899999987 9999999999999999999999999999999887643
No 69
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.4e-65 Score=550.70 Aligned_cols=520 Identities=23% Similarity=0.267 Sum_probs=397.9
Q ss_pred CchHHHHHHHHHHcCCCCeEEeC------------C-----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 044926 14 LTPLVFLERAATVYGDSPSIIYN------------N-----------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVV 70 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~------------~-----------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~ 70 (569)
.|+.++|+++++.+||++|+.+. + +.+||+||.++++++|.+|.+.|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 58999999999999999999431 1 248999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcc
Q 044926 71 SPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDA 150 (569)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (569)
++|+++|+++++||+++|+++||+++.++.+++.++|++++++++|++.+....+......... ++.++.+++....
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~---l~~ii~~~~~~~~ 214 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET---VKRVIYMDDEGVD 214 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC---ceEEEEECCCCch
Confidence 9999999999999999999999999999999999999999999999998776666555443322 4666766543211
Q ss_pred cccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC-CCC
Q 044926 151 AVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW-SVP 229 (569)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~-~~~ 229 (569)
..... ..........++++.+.+...........++|+++|+|||||||.||||.+||+++...+......+ ++.
T Consensus 215 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~ 290 (696)
T PLN02387 215 SDSSL----SGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLG 290 (696)
T ss_pred hhhhh----hccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCC
Confidence 00000 0001112345666655443222222234678999999999999999999999999988877665543 578
Q ss_pred CCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccC------C--HHHHHHHHHHhCcceeechhHHHHHHHcCCCCC--
Q 044926 230 TQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKF------D--ASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPD-- 299 (569)
Q Consensus 230 ~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~------~--~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-- 299 (569)
.+|++++.+|++|.+++...+.++..|+++...... + +..++..+++++||++.++|.++..+.+.....
T Consensus 291 ~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~ 370 (696)
T PLN02387 291 KNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVD 370 (696)
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHh
Confidence 899999999999999998766667777776554321 1 234567899999999999999999886532100
Q ss_pred -----------------------------CCC--------------CCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeee
Q 044926 300 -----------------------------KKP--------------LKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSH 335 (569)
Q Consensus 300 -----------------------------~~~--------------~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~ 335 (569)
... ...+++|.+++||+++++++.+.++ .+|+++++
T Consensus 371 ~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~ 450 (696)
T PLN02387 371 AKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQ 450 (696)
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeE
Confidence 000 0014899999999999999988877 47999999
Q ss_pred cccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCC-cccCCCCCceeEEEEecCcccccccC
Q 044926 336 GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSG-VSAKRDGSTLGEIVLRGGCIMLGYLK 414 (569)
Q Consensus 336 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~-~~~~~~~~~~Gel~v~~~~~~~gy~~ 414 (569)
+||+||+++.++.+... .....++|.|.+++ +++|+|.+++ ..........|||+|+||+++.|||+
T Consensus 451 ~YG~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~ 518 (696)
T PLN02387 451 GYGLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFK 518 (696)
T ss_pred eechhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhcC
Confidence 99999998666543211 11235799999999 9999994343 32211112469999999999999999
Q ss_pred CccccccccC--CCC--eeeecceEEEecCCcEEEeccCCCeEEe-CceeeeHHHHHHHHHcCCCcceeEEEecCCCCCC
Q 044926 415 DPIGTRKCMT--DDG--WFYTGDVGVMHSDGYLEIKDRSKDVIIS-GGENLSSVEVESVLYSNPAVNEAAVVARPDEFWG 489 (569)
Q Consensus 415 ~~~~~~~~~~--~~~--~~~TGD~~~~~~dg~l~~~GR~~~~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~ 489 (569)
+|+.+...|. ++| ||+|||+|++++||++++.||.+|+||. +|++|+|.+||++|.++|.|.+++|++.+..
T Consensus 519 ~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~--- 595 (696)
T PLN02387 519 NQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH--- 595 (696)
T ss_pred CHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---
Confidence 9999998883 345 9999999999999999999999999996 7999999999999999999999999987642
Q ss_pred ceeEEEEEecCCCC-----------C--------CCCHHHHHHHH-----hccCCCCccccEEEEecccC------CCCC
Q 044926 490 ETPCAFVSLKEGSK-----------S--------KPTEKEMIEYC-----RGRLPHYMVPKTVVFMDELP------KTST 539 (569)
Q Consensus 490 ~~~~~~v~~~~~~~-----------~--------~~~~~~l~~~l-----~~~l~~~~~p~~~~~~~~iP------~t~~ 539 (569)
..++++|++.+..- . ....+++.+.+ +++|..+.+|+.|.++.+-. +|++
T Consensus 596 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t 675 (696)
T PLN02387 596 SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAA 675 (696)
T ss_pred ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChh
Confidence 44677777654210 0 00112222223 34699999999998886532 7788
Q ss_pred CcccHHHHHHHHHhcC
Q 044926 540 GKIQKFVLREIAENMG 555 (569)
Q Consensus 540 GKi~r~~l~~~~~~~~ 555 (569)
.|+.|+.+++.|++.-
T Consensus 676 ~K~~R~~i~~~y~~~i 691 (696)
T PLN02387 676 LKLKREQIRKKFKDDL 691 (696)
T ss_pred hhhhhHHHHHHHHHHH
Confidence 8999999999998753
No 70
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.5e-65 Score=532.48 Aligned_cols=480 Identities=25% Similarity=0.320 Sum_probs=401.8
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
.+.++.+.|.+++..+|+++|+++.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 57889999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhh
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYE 171 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
+|+++.++.+++.++++.++++.+|+++...+.+.... ..++.+..... ...
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---------~~~~~~~~~~~-------------------~~~ 164 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD---------DAVAVIDPATA-------------------GAE 164 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh---------cceEEeccchh-------------------hhh
Confidence 99999999999999999999999999887655433211 12222221100 000
Q ss_pred HhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHH--HHHhhhhccCCCCCCCEEEEecCchhhhhhhHH
Q 044926 172 SLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIF--IVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFP 249 (569)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~--~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~ 249 (569)
... ..+...++.++++|||||||.||+|.++|.... .........+++..+|+++...|++|.+++...
T Consensus 165 ---~~~------~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~ 235 (516)
T PRK13383 165 ---ESG------GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGML 235 (516)
T ss_pred ---cCC------CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHH
Confidence 000 011223467899999999999999999997432 111222344678889999999999999999888
Q ss_pred HHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-h
Q 044926 250 WAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-S 328 (569)
Q Consensus 250 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~ 328 (569)
+.++..|++++....+++..+++.++++++|.+.++|.++..+.+..........+.++|.+++||+++++.+++++. .
T Consensus 236 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~ 315 (516)
T PRK13383 236 MLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDT 315 (516)
T ss_pred HHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHH
Confidence 888889999988888999999999999999999999999999987654322222234899999999999999999988 5
Q ss_pred cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcc
Q 044926 329 LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCI 408 (569)
Q Consensus 329 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 408 (569)
++..+++.||+||++..+..+.. .......++|.|.++. .++|+|+ ++.+++.+ +.|||+++|+++
T Consensus 316 ~g~~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~ 381 (516)
T PRK13383 316 YGDILYNGYGSTEVGIGALATPA----------DLRDAPETVGKPVAGC-PVRILDR-NNRPVGPR--VTGRIFVGGELA 381 (516)
T ss_pred cCchhhhcccccccccceecccc----------ccccCCCcccCCCCCc-EEEEECC-CCCCCCCC--CceEEEEecCcc
Confidence 79999999999999865543321 1112345789999998 9999996 67777777 899999999999
Q ss_pred cccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCC
Q 044926 409 MLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFW 488 (569)
Q Consensus 409 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~ 488 (569)
+.||++.+.. .+. +|||+|||+|+++++|++++.||.+|+|+++|.+|++.+||+.|.++|+|.++++++.++...
T Consensus 382 ~~~Y~~~~~~---~~~-~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~ 457 (516)
T PRK13383 382 GTRYTDGGGK---AVV-DGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERF 457 (516)
T ss_pred cccccCCchh---hee-cCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEecccccc
Confidence 9999987542 233 799999999999999999999999999999999999999999999999999999999998888
Q ss_pred CceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 489 GETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 489 ~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
|+.+.++|+..++.. ...++++++++++++.+++|..++++++||+|.+||++|++|+
T Consensus 458 g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 458 GHRLAAFVVLHPGSG--VDAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred CceEEEEEEECCCCC--CCHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 889999999876654 5778999999999999999999999999999999999999874
No 71
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.1e-65 Score=532.96 Aligned_cols=488 Identities=25% Similarity=0.346 Sum_probs=394.9
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
.|+.++|.+++ .|+++|+++.+..+||.||.++++++|..|.+.|+ .+||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 47888888765 79999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|++|.++.+++.+++++++++++|++++....+.+.. .. ...++.+... .+.+
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~----~~~~i~~~~~---------------------~~~~ 133 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LP----GVRVLDVDTP---------------------AYAE 133 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--cc----CceEEEccch---------------------hhhh
Confidence 9999999999999999999999999877655443321 00 1122222211 1222
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHH-H
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPW-A 251 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~-~ 251 (569)
++..... ..+.....++++++++|||||||.||+|.++|+++..........+++..+|+++...|++|.+++...+ .
T Consensus 134 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~ 212 (540)
T PRK13388 134 LVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAP 212 (540)
T ss_pred hhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHH
Confidence 2211111 1111224568999999999999999999999999988888778888999999999999999999887654 4
Q ss_pred HHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcC
Q 044926 252 MAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLG 330 (569)
Q Consensus 252 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~ 330 (569)
++..|+++++.+.+++..+++.++++++|++..+|..+..++........... +++ +.+ |+.+.+.....+. .++
T Consensus 213 ~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~--~l~-~~~-G~~~~~~~~~~~~~~~~ 288 (540)
T PRK13388 213 AVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADN--PLR-VAF-GNEASPRDIAEFSRRFG 288 (540)
T ss_pred HHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCcccccc--ceE-EEE-CCCCCHHHHHHHHHHhC
Confidence 57788888877778999999999999999999999999998876543221112 445 333 5566777777766 679
Q ss_pred CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeE-----------EeCCCCCcccCCCCCcee
Q 044926 331 FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVD-----------VLDPKSGVSAKRDGSTLG 399 (569)
Q Consensus 331 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------i~d~~~~~~~~~~~~~~G 399 (569)
+++++.||+||++.++.... . ....++|.|.+++ .+. ++|. +|..+..+ ++.|
T Consensus 289 ~~l~~~YG~tE~~~~~~~~~---~----------~~~~~vG~p~~g~-~i~~~~~~~~~~~~~~d~-~g~~~~~~-~~~G 352 (540)
T PRK13388 289 CQVEDGYGSSEGAVIVVREP---G----------TPPGSIGRGAPGV-AIYNPETLTECAVARFDA-HGALLNAD-EAIG 352 (540)
T ss_pred CceecccccccccceeecCC---C----------CCCCCCCCCCCCc-EEEcCCCCccccceeccC-ccccccCC-Ccce
Confidence 99999999999986654321 0 1134678888765 331 2332 33333221 2689
Q ss_pred EEEEe-cCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCccee
Q 044926 400 EIVLR-GGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEA 478 (569)
Q Consensus 400 el~v~-~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~ 478 (569)
||+++ |+.++.||+++++.+...|. +|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||.+|.++|+|.+|
T Consensus 353 El~v~~g~~~~~gY~~~~~~t~~~~~-~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~ 431 (540)
T PRK13388 353 ELVNTAGAGFFEGYYNNPEATAERMR-HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRV 431 (540)
T ss_pred EEEEecCCcccccccCChHHHHHHhh-cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEE
Confidence 99998 99999999999999888886 79999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhc--cCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRG--RLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 479 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~--~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+|++.+++..|+.+++++++.++.. .+.++++++++. .|+.+++|..++++++||+|++||++|++|+++..+.
T Consensus 432 ~v~g~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 432 AVYAVPDERVGDQVMAALVLRDGAT--FDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred EEEEccCCCCCceeEEEEEECCCCc--CCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 9999999888888888888876655 677889999976 4999999999999999999999999999999976544
No 72
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-64 Score=532.26 Aligned_cols=527 Identities=24% Similarity=0.285 Sum_probs=420.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.+..++.++|+++++.+|+++|+.+.++.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 30 ~~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 109 (567)
T PRK06178 30 HGERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAV 109 (567)
T ss_pred cCcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCc--ccc
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQ--FFS 168 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 168 (569)
++|++|..+..++.++++.++++++++++...+.+.+...... ...+++....+..........+...... ...
T Consensus 110 ~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (567)
T PRK06178 110 HVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETS----LRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAA 185 (567)
T ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCC----cceEEEecccccccccccccccccccccccccc
Confidence 9999999999999999999999999999887776665543321 2344433321110000000000000000 000
Q ss_pred hhhHhhhcCC--CCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc-cCCCCCCCEEEEecCchhhhh
Q 044926 169 TYESLVAKGD--PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS-DWSVPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 169 ~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~-~~~~~~~d~~~~~~pl~~~~g 245 (569)
.+.++++... ...........+++++++|||||||.||+|.+||.+++........ ...+..+|++++.+|++|..|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g 265 (567)
T PRK06178 186 GAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAG 265 (567)
T ss_pred ccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHH
Confidence 1111111111 1111112345789999999999999999999999998876544433 356788999999999999999
Q ss_pred hhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEE--eCCCCcHHH
Q 044926 246 WCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVT--AGAPPPAAV 322 (569)
Q Consensus 246 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~--~g~~l~~~~ 322 (569)
+.. .+.++..|+++++.+++++..++..++++++|.+.++|..+..+++........+. +++.+.. .++.+++..
T Consensus 266 ~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~--~l~~~~~~~~~~~~~~~~ 343 (567)
T PRK06178 266 ENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLS--SLRQVRVVSFVKKLNPDY 343 (567)
T ss_pred HHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcc--hheeeeeccccccCCHHH
Confidence 854 66778899999999889999999999999999999999999998876543333443 6777544 458999999
Q ss_pred HHHHH-hcCCeeee-cccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeE
Q 044926 323 LLRTE-SLGFKVSH-GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGE 400 (569)
Q Consensus 323 ~~~~~-~~~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 400 (569)
.+.++ .++..++. .||+||+++.+......... ..........+|.|.+++ +++|+|++++..++.| +.||
T Consensus 344 ~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~----~~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~Ge 416 (567)
T PRK06178 344 RQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDD----DFDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AEGE 416 (567)
T ss_pred HHHHHHHhCCcccccccccccccccceeccccccC----ccccccCCcccccccCCc-EEEEEcCCCCCcCCCC--CceE
Confidence 99988 45776665 79999987654432211000 000112335689999998 9999998789988887 8999
Q ss_pred EEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEE
Q 044926 401 IVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAV 480 (569)
Q Consensus 401 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 480 (569)
|+++|++++.||+++++.+...+. +|||+|||+|++++||++++.||.+|+|+.+|+++++.+||+++.++++|.++++
T Consensus 417 l~v~g~~v~~gY~~~~~~~~~~~~-dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v 495 (567)
T PRK06178 417 IVVRTPSLLKGYWNKPEATAEALR-DGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAV 495 (567)
T ss_pred EEEECCcccccccCChhhhhhccc-CCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEE
Confidence 999999999999999998888887 7899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 481 VARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 481 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
++.+++..|+.++++|+..++.. .+.++++++++++++.+++|. ++++++||+|++||++|++|++++++.
T Consensus 496 ~~~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 496 VGRPDPDKGQVPVAFVQLKPGAD--LTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred EcCcCcccCcceEEEEEeCCCCc--CCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 99988877888999998876654 678899999999999999996 888999999999999999999999775
No 73
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-64 Score=533.52 Aligned_cols=516 Identities=29% Similarity=0.352 Sum_probs=413.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
..+.++.++|.++++.+|+++|+++.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~ 99 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYV 99 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccc----------cCCCCC
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSS----------QSHHPN 160 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 160 (569)
++|++|..+.+++.++++.++++++|+++.....+........ ...+++........... ......
T Consensus 100 ~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (557)
T PRK07059 100 VVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTA----VKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPA 175 (557)
T ss_pred EeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccC----CceeEEecccccccccccccccccccccccccc
Confidence 9999999999999999999999999998876655544433211 23333322111000000 000000
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC----CC---CCCCE
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW----SV---PTQPV 233 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~----~~---~~~d~ 233 (569)
. .......+.+.+..............++++++++|||||||.||+|.++|.+++.++......+ .. .....
T Consensus 176 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 176 W-SLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred c-CCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 0 0000123444443332222222335678999999999999999999999999876654332211 11 12456
Q ss_pred EEEecCchhhhhhhH-HHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceE
Q 044926 234 YLWTLPMFHSNGWCF-PWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHL 311 (569)
Q Consensus 234 ~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~ 311 (569)
+++.+|++|.+++.. .+..+..|++.++.+. .++..+++.++++++|.+.++|.++..+.+........++ +++.+
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~--~l~~~ 332 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFS--KLIVA 332 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCch--hheEE
Confidence 788899999988754 4566777887776653 6889999999999999999999999999887654444444 89999
Q ss_pred EEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcc
Q 044926 312 VTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVS 390 (569)
Q Consensus 312 ~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~ 390 (569)
+.||+.+++.+.+++. .+++++++.||+||++.++..+... ......++|.|.++. .++|+|+ ++..
T Consensus 333 ~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~vG~p~~g~-~v~i~d~-~~~~ 400 (557)
T PRK07059 333 NGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVD----------ATEFSGTIGLPLPST-EVSIRDD-DGND 400 (557)
T ss_pred EeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCC----------CCCcCCcccCccCCc-EEEEECC-CCCC
Confidence 9999999999998887 5799999999999998766543211 112235789999998 9999997 6777
Q ss_pred cCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926 391 AKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY 470 (569)
Q Consensus 391 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~ 470 (569)
++.| +.|||+++|+.++.||+++++.+...+..+|||+|||+|++++||.+++.||.+|+++++|++|+|.+||++|.
T Consensus 401 ~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~ 478 (557)
T PRK07059 401 LPLG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVA 478 (557)
T ss_pred CCCC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHH
Confidence 8877 88999999999999999999998888877899999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
++++|.+++|++.++...|+.++++++..+.. .+.++++++++++++.+++|..++++++||+|++||++|+.|+++
T Consensus 479 ~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~---~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 479 SHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPA---LTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred hCCceeEEEEEecccCCCCeeEEEEEEeCCCC---CCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 99999999999998888788888888865432 567899999999999999999999999999999999999999864
No 74
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-64 Score=535.31 Aligned_cols=521 Identities=29% Similarity=0.412 Sum_probs=416.0
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
.++.++|.+.+..+|+++|+++.++.+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCccccccc-------CCCCC----CC
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQ-------SHHPN----IS 162 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~ 162 (569)
++|..+.+++.++++.++++++++++.....+........ ...++............. ....+ ..
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATK----IEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhc----cceeEEeccccccccccccccchhhccccccccccc
Confidence 9999999999999999999999998865544332221111 122222111100000000 00000 00
Q ss_pred CCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc-cCCCC-CCCEEEEecCc
Q 044926 163 DDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS-DWSVP-TQPVYLWTLPM 240 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~-~~~~~-~~d~~~~~~pl 240 (569)
.......++.+....... ........+++++++|||||||.||+|.++|+++..++..... .++.. ..+++++..|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~ 258 (563)
T PRK06710 180 ESETIHLWNSVEKEVNTG-VEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPF 258 (563)
T ss_pred ccchhhhhhhhhhccccc-cccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCch
Confidence 000000112211111110 0011123578999999999999999999999998755433322 23333 34678999999
Q ss_pred hhhhhhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCc
Q 044926 241 FHSNGWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPP 319 (569)
Q Consensus 241 ~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~ 319 (569)
+|.+++.. .+.+++.|+++++.+++++..+++.|+++++|++.++|+++..+.+........++ ++|.+++||++++
T Consensus 259 ~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~v~~gg~~~~ 336 (563)
T PRK06710 259 FHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDIS--SIRACISGSAPLP 336 (563)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChh--hhhheeeCCCcCC
Confidence 99998865 44567789998888889999999999999999999999999999886544444444 8999999999999
Q ss_pred HHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCce
Q 044926 320 AAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTL 398 (569)
Q Consensus 320 ~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~ 398 (569)
+++.++++ .+++++++.||+||++..+...... .......+|.+.++. .++++|++++..++.| +.
T Consensus 337 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g--~~ 403 (563)
T PRK06710 337 VEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG--EI 403 (563)
T ss_pred HHHHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC--Cc
Confidence 99999988 4689999999999998755432110 011234678898887 8999998888888887 88
Q ss_pred eEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCccee
Q 044926 399 GEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEA 478 (569)
Q Consensus 399 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~ 478 (569)
|||+++|+.++.||+++++.+...+. ++||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||++|.++++|.++
T Consensus 404 Gel~v~g~~~~~gY~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~ 482 (563)
T PRK06710 404 GEIVVKGPQIMKGYWNKPEETAAVLQ-DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEV 482 (563)
T ss_pred eEEEEecCccchhhhCChHHHhhhcc-cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeE
Confidence 99999999999999999998888776 89999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 479 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
+|++.+++..|+.++++++..++.. .+.++++++++++++.+++|..++++++||+|++||++|++|++++.....+
T Consensus 483 ~v~~~~~~~~g~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~~~ 559 (563)
T PRK06710 483 VTIGVPDPYRGETVKAFVVLKEGTE--CSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKNED 559 (563)
T ss_pred EEEccccCCcCceeEEEEEECCCCC--CCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcCcc
Confidence 9999999888888899998887654 6788999999999999999999999999999999999999999988776543
No 75
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4.7e-65 Score=590.89 Aligned_cols=517 Identities=20% Similarity=0.212 Sum_probs=405.9
Q ss_pred CCchHHHHHHHHHHcCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Q 044926 13 PLTPLVFLERAATVYGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFA 83 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 83 (569)
..++.++|+++++.+|+++|+++ .++.+||+||.++++++|.+|.+.|+++|++|+|+++|+++++++++|
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 35799999999999999999985 347899999999999999999999999999999999999999999999
Q ss_pred hhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccH---HHHHHHHhc-CCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 84 VPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSR---ALVREAVSL-FPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
|+++|++++|++|.++.+++.++++.++++++|++.... ..+...... .......+.+. +........ .. .
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~--~ 389 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLVG--GS--L 389 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-ecccccccc--cc--c
Confidence 999999999999999999999999999999999976421 111111110 00000011111 111100000 00 0
Q ss_pred CCCCCcccchhhHhhhcCC--CCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEe
Q 044926 160 NISDDQFFSTYESLVAKGD--PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWT 237 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~ 237 (569)
. ....+.+.... ..........++++++|+|||||||.||||.++|+++...+.+....+++..+|+++..
T Consensus 390 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~ 462 (1389)
T TIGR03443 390 E-------GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTML 462 (1389)
T ss_pred c-------cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 0 00000000000 00001112456899999999999999999999999999988888888999999999999
Q ss_pred cCchhhhhhhHHHHHHHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEe
Q 044926 238 LPMFHSNGWCFPWAMAAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTA 314 (569)
Q Consensus 238 ~pl~~~~g~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~ 314 (569)
.|++|..++...+.+++.|+++++.+. .++..+++.|+++++|++.++|+++..|.... ...++ ++|.+++|
T Consensus 463 ~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~--~lr~~~~g 537 (1389)
T TIGR03443 463 SGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIP--SLHHAFFV 537 (1389)
T ss_pred cCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCC--CccEEEEe
Confidence 999999988888999999999988764 36889999999999999999999999987543 22344 89999999
Q ss_pred CCCCcHHHHHHHHhc--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCC-Cccc
Q 044926 315 GAPPPAAVLLRTESL--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKS-GVSA 391 (569)
Q Consensus 315 g~~l~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~-~~~~ 391 (569)
|+.+++...+++.+. ++++++.||+||++..+.......................+|.|.+++ ++.|+|++. +.++
T Consensus 538 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~ 616 (1389)
T TIGR03443 538 GDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTC 616 (1389)
T ss_pred cccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcC
Confidence 999999999888753 789999999999976665432211100000000011235689999998 999999743 4667
Q ss_pred CCCCCceeEEEEecCcccccccCCccccccccC----------------------------CCCeeeecceEEEecCCcE
Q 044926 392 KRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMT----------------------------DDGWFYTGDVGVMHSDGYL 443 (569)
Q Consensus 392 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----------------------------~~~~~~TGD~~~~~~dg~l 443 (569)
+.| +.|||+|+|+.+++||+++|+.+...|. .++||+|||+|++++||.+
T Consensus 617 ~~G--~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l 694 (1389)
T TIGR03443 617 GVG--EVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNV 694 (1389)
T ss_pred CCC--CceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCE
Confidence 777 8999999999999999999999988773 2579999999999999999
Q ss_pred EEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC-------------------
Q 044926 444 EIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS------------------- 504 (569)
Q Consensus 444 ~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~------------------- 504 (569)
++.||.||+||++|++|+|.+||.+|.++|.|.+++|++.+++..+..++++++...+...
T Consensus 695 ~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (1389)
T TIGR03443 695 ECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVK 774 (1389)
T ss_pred EEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchh
Confidence 9999999999999999999999999999999999999988887767788999887622110
Q ss_pred -----CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHH
Q 044926 505 -----KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549 (569)
Q Consensus 505 -----~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~ 549 (569)
....++++++++++|+.|++|..++++++||+|++||++|++|++
T Consensus 775 ~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 775 GLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred hhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 012468999999999999999999999999999999999999964
No 76
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.1e-64 Score=533.05 Aligned_cols=514 Identities=24% Similarity=0.300 Sum_probs=412.1
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLL-SIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~-~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
..++.++|.+++..+|+++|+++.++.+||+||.+++.++|..|. +.|+++||+|+++++|+++++++++||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 468999999999999999999999999999999999999999997 5799999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCccc--cc-------c--cCCCCC
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAA--VS-------S--QSHHPN 160 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~--~~~~~~ 160 (569)
+|++|.++.+++.++++.++++++|+++.....+........ ...++......... .. . ....+.
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP----VKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPE 179 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC----ccEEEEechhhhcccccchhhhhhhhhhhccccc
Confidence 999999999999999999999999999877665555443322 22333221100000 00 0 000000
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC----CCCC-CEEE
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS----VPTQ-PVYL 235 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~----~~~~-d~~~ 235 (569)
... .....+.+.+...............+++++++|||||||.||+|.++|.++..........+. +..+ ++++
T Consensus 180 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (560)
T PRK08751 180 YRI-NGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVI 258 (560)
T ss_pred cCC-CccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEE
Confidence 000 001223333332221111122345689999999999999999999999999877765544433 3333 5678
Q ss_pred EecCchhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEE
Q 044926 236 WTLPMFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVT 313 (569)
Q Consensus 236 ~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~ 313 (569)
+..|++|.+++.. .+..+..|++.++.. .+++..+++.++++++|++.++|.++..+.+.......+++ ++|.+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~--~lr~v~~ 336 (560)
T PRK08751 259 TALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFS--SLKMTLG 336 (560)
T ss_pred EecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchh--hheeeee
Confidence 8899999999865 455566777776654 57899999999999999999999999999987544444444 9999999
Q ss_pred eCCCCcHHHHHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccC
Q 044926 314 AGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAK 392 (569)
Q Consensus 314 ~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 392 (569)
||+++++.+.+.++ .+++++++.||+||+++.+..+.... .....++|.+.++. .++++|+ ++..++
T Consensus 337 gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~ 404 (560)
T PRK08751 337 GGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL----------KEYNGSIGLPIPST-DACIKDD-AGTVLA 404 (560)
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc----------cccCCCcCccCCCc-eEEEECC-CCCCCC
Confidence 99999999999888 46899999999999987665433110 11234689999988 9999996 778887
Q ss_pred CCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcC
Q 044926 393 RDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSN 472 (569)
Q Consensus 393 ~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~ 472 (569)
.+ +.|||+++|+.++.||+++++.+...+..+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||..|.++
T Consensus 405 ~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 405 IG--EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred CC--CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhC
Confidence 77 8899999999999999999999988887789999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 473 PAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 473 ~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
++|.+++|++.++...|+.++++++... .. ...+++++.++++++.+++|..++++++||+|++||++|++|++.
T Consensus 483 ~~v~~~~v~~~~~~~~ge~~~~~v~~~~-~~--~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 483 PGVLEVAAVGVPDEKSGEIVKVVIVKKD-PA--LTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred cCeeeeEEEecCCCCCCceEEEEEEcCC-CC--CCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 9999999999998877777777776543 22 577899999999999999999999999999999999999999876
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-64 Score=579.33 Aligned_cols=518 Identities=21% Similarity=0.231 Sum_probs=421.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeC-CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYN-NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~-~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
....|+.++|.++++++|+++|+++. ++.+||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 34567999999999999999999874 5799999999999999999987 479999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|++|..+.+++.+++++++++.++++++..+.+......... .....++..++..... . ....
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~---~~~~ 756 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLEL-PENVKVIYLEDLKAKI----------S---KVDK 756 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhc-ccCceEEEeehhcccc----------c---hhHH
Confidence 999999999999999999999999999987665544321000000 0023344333211000 0 0011
Q ss_pred hhHhhhcCC-CC----cccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhh
Q 044926 170 YESLVAKGD-PE----FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSN 244 (569)
Q Consensus 170 ~~~~~~~~~-~~----~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~ 244 (569)
+.+...... +. ........++|+++++|||||||.||+|.++|+++..........+++.++|++++.+|++|..
T Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 836 (1146)
T PRK08633 757 LTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSF 836 (1146)
T ss_pred HHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHH
Confidence 222211110 00 0001235678999999999999999999999999999888888888899999999999999999
Q ss_pred hhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHH
Q 044926 245 GWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAV 322 (569)
Q Consensus 245 g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~ 322 (569)
++.. .+.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.......+++ ++|.+++||+++++++
T Consensus 837 g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~lr~~~~gg~~~~~~~ 914 (1146)
T PRK08633 837 GLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFA--SLRLVVAGAEKLKPEV 914 (1146)
T ss_pred hHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCC--CeeeEEEcCCcCCHHH
Confidence 9876 677788898888776 47899999999999999999999999999886544444555 9999999999999999
Q ss_pred HHHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEE
Q 044926 323 LLRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 323 ~~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 401 (569)
.++++ .+++++++.||+||+++.+..+.......... ........++|.|.+++ +++|+|++++++++.| +.|||
T Consensus 915 ~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel 990 (1146)
T PRK08633 915 ADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFK-RQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLI 990 (1146)
T ss_pred HHHHHHHhCCCeecccccccCcceEEEecCcccccccc-cccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEE
Confidence 99988 57999999999999987665432211000000 01112346789999998 9999999889999887 89999
Q ss_pred EEecCcccccccCCccccccccCC---CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCC--Ccc
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTD---DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNP--AVN 476 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~--~i~ 476 (569)
+++|++++.||+++++.+...+.+ ++||+|||+|++++||++++.||.+|+||++|++|+|.+||++|.++| .+.
T Consensus 991 ~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~ 1070 (1146)
T PRK08633 991 LIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEV 1070 (1146)
T ss_pred EEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCc
Confidence 999999999999999988877762 389999999999999999999999999999999999999999999998 466
Q ss_pred eeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhc-cCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 477 EAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRG-RLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 477 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+++|++.+++..|+.++++++.. . .+.+++++++++ +++.+++|..++++++||+|++||++|++|+++..++
T Consensus 1071 ~~~v~~~~~~~~g~~~~~~v~~~---~--~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1071 VFAVTAVPDEKKGEKLVVLHTCG---A--EDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred eEEEEeccCCCCCcEEEEEEecC---c--cCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 89999999998888888888762 1 466889998874 6999999999999999999999999999999987765
No 78
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-65 Score=632.36 Aligned_cols=492 Identities=19% Similarity=0.235 Sum_probs=419.9
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
...|+.++|+++++++|+++|+++.++++||+||.++++++|..|.+.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 3093 ~~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~ 3172 (3956)
T PRK12467 3093 SERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAY 3172 (3956)
T ss_pred ccccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEe
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhh
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYE 171 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
+|++|.++.+++.+++++++++++|++....+.+... . ...++.++....
T Consensus 3173 vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~----~----~~~~~~~~~~~~---------------------- 3222 (3956)
T PRK12467 3173 VPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP----A----GDTALTLDRLDL---------------------- 3222 (3956)
T ss_pred ecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc----c----CCceeeecchhh----------------------
Confidence 9999999999999999999999999987654332110 0 112222221100
Q ss_pred HhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHH
Q 044926 172 SLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWA 251 (569)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~ 251 (569)
.......+.....++++++++|||||||.||||.++|+++...+.+....++++.+|+++...|++|..+....+.
T Consensus 3223 ----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~ 3298 (3956)
T PRK12467 3223 ----NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLW 3298 (3956)
T ss_pred ----cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHH
Confidence 0000111112356789999999999999999999999999999999989999999999999999999999888999
Q ss_pred HHHhCceEEEecc--CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-
Q 044926 252 MAAVGGTNICIRK--FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES- 328 (569)
Q Consensus 252 ~~~~g~~~~~~~~--~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~- 328 (569)
+++.|+++++.+. +++..+++.|+++++|++.++|+++..+++... ...+. ++|.+++|||++++++.+++.+
T Consensus 3299 ~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~--~lr~~~~gGe~~~~~~~~~~~~~ 3374 (3956)
T PRK12467 3299 TLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCA--SLDIYVFGGEAVPPAAFEQVKRK 3374 (3956)
T ss_pred HHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCC--CceEEEEecCCCCHHHHHHHHHh
Confidence 9999999988875 789999999999999999999999999986532 23344 8999999999999999999874
Q ss_pred c-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCc
Q 044926 329 L-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGC 407 (569)
Q Consensus 329 ~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 407 (569)
+ ++.+++.||+||++..++......+ ........++|.|+++. +++|+|. .+.+++.| +.|||+|+|+.
T Consensus 3375 ~~~~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~G~~ 3444 (3956)
T PRK12467 3375 LKPRGLTNGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDG-QLNPVPVG--VAGELYIGGVG 3444 (3956)
T ss_pred CCCCEEEeCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECC-CCCCCCCC--CCceEEEcchh
Confidence 4 6889999999999876654432111 11112235789999999 9999996 68888888 89999999999
Q ss_pred ccccccCCccccccccCCCC-------eeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEE
Q 044926 408 IMLGYLKDPIGTRKCMTDDG-------WFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAV 480 (569)
Q Consensus 408 ~~~gy~~~~~~~~~~~~~~~-------~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 480 (569)
+++||+++++.+..+|..++ ||+|||+|++++||.+++.||.|++||++|.+|++.+||.+|.++|+|.+++|
T Consensus 3445 v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v 3524 (3956)
T PRK12467 3445 LARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVV 3524 (3956)
T ss_pred hhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEE
Confidence 99999999999999986543 69999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 481 VARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 481 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
++.+.. .++.++++|+...... ...++++++++++|+.|++|..++++++||+|++||++|++|++.....
T Consensus 3525 ~~~~~~-~~~~lva~v~~~~~~~--~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~~ 3595 (3956)
T PRK12467 3525 LARDGA-GGKQLVAYVVPADPQG--DWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAKG 3595 (3956)
T ss_pred EEecCC-CCcEEEEEEeCCCCCc--ccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCccc
Confidence 988543 4778999998876543 5778999999999999999999999999999999999999998765443
No 79
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.8e-65 Score=541.22 Aligned_cols=508 Identities=21% Similarity=0.281 Sum_probs=396.6
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNN---------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~---------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
+.+|+.++++++++.+|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 44799999999999999999998632 4899999999999999999986 8999999999999999999999
Q ss_pred HhhhccceEeec-cCCCC--HHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 83 AVPFAAAVLNTI-NTRLD--ARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 83 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
||+++|++++|+ ++.++ .+++.+++++++++++|++++..+.+.......... ....++.++....
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~---------- 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRL-RRPRVIAIDAIPD---------- 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccc-cCceEEEeccccc----------
Confidence 999999999999 57776 789999999999999999987766554443322110 0123333321100
Q ss_pred CCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC-CCCCCEEEEec
Q 044926 160 NISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS-VPTQPVYLWTL 238 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~-~~~~d~~~~~~ 238 (569)
..... .......++++++|+|||||||.||||.++|+++..++......++ +.+++++++.+
T Consensus 180 ----------------~~~~~-~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~ 242 (612)
T PRK12476 180 ----------------SAGES-FVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWL 242 (612)
T ss_pred ----------------ccccc-ccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeC
Confidence 00000 0011235679999999999999999999999999877766666677 78889999999
Q ss_pred CchhhhhhhHHHHHHHhCceEEEecc--C--CHHHHHHHHH--HhCcceeechhHHHHHHHcCCCC--CCCCCCcCCCce
Q 044926 239 PMFHSNGWCFPWAMAAVGGTNICIRK--F--DASIIFDLIR--RHGVTHMCGAPVVLNMLSNYRDP--DKKPLKLAKPVH 310 (569)
Q Consensus 239 pl~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~l~--~~~~t~~~~~P~~l~~l~~~~~~--~~~~~~~~~l~~ 310 (569)
|++|..|+...+.+++.|++.+++.+ + ++..+++.++ +++++++.++|.++..+...... ......+.++|
T Consensus 243 Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr- 321 (612)
T PRK12476 243 PLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV- 321 (612)
T ss_pred CcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-
Confidence 99999999877777777887777653 3 8899999995 58999999999988877653211 11222344889
Q ss_pred EEEeCCCCcHHHHHHHHh-c---CC---eeeecccccccccceeeccccccc--ccCcHHH--------------Hhhhh
Q 044926 311 LVTAGAPPPAAVLLRTES-L---GF---KVSHGYGLTETGGIVVSCAWKRNW--NLLPAAE--------------KAKLK 367 (569)
Q Consensus 311 ~~~~g~~l~~~~~~~~~~-~---~~---~i~~~YG~tE~~~~~~~~~~~~~~--~~~~~~~--------------~~~~~ 367 (569)
+++||+++++.+.+++.+ + |+ .+++.||+||++..+......... ....... .....
T Consensus 322 ~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 401 (612)
T PRK12476 322 LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAH 401 (612)
T ss_pred EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCccee
Confidence 999999999999998874 3 43 489999999987554332111000 0000000 00012
Q ss_pred cccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccC------------------CCCee
Q 044926 368 ARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMT------------------DDGWF 429 (569)
Q Consensus 368 ~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~~~~~ 429 (569)
.++|.|.++. +++|+|++++.+++.| +.|||+++|++++.||+++++.+...|. .++||
T Consensus 402 ~~~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~ 478 (612)
T PRK12476 402 VSCGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWL 478 (612)
T ss_pred EeCCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCee
Confidence 4789999998 9999998768888887 8999999999999999999998877773 13599
Q ss_pred eecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHc-CCCcce--eEEEecCCCCCCceeEEEEEecCCCCCCC
Q 044926 430 YTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYS-NPAVNE--AAVVARPDEFWGETPCAFVSLKEGSKSKP 506 (569)
Q Consensus 430 ~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~-~~~i~~--~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 506 (569)
+|||+|+++ ||+++++||.+|+||++|++|+|.+||++|.+ ||.|.+ +++++.+++. ++.++++++..++.. ..
T Consensus 479 ~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~-~~ 555 (612)
T PRK12476 479 RTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTS-RA 555 (612)
T ss_pred eccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcc-cc
Confidence 999999985 99999999999999999999999999999985 899999 6777777776 788889888876532 14
Q ss_pred CHHHHHHHHhccCC-CCcc-ccEEEEec--ccCCCCCCcccHHHHHHHHHhcC
Q 044926 507 TEKEMIEYCRGRLP-HYMV-PKTVVFMD--ELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 507 ~~~~l~~~l~~~l~-~~~~-p~~~~~~~--~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+.++|.+++++++. .+++ |..+.+++ +||+|++||++|++|++++.+..
T Consensus 556 ~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~ 608 (612)
T PRK12476 556 DPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGR 608 (612)
T ss_pred cHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCC
Confidence 66788888888876 4777 67788886 69999999999999999987654
No 80
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=6.5e-65 Score=532.61 Aligned_cols=486 Identities=22% Similarity=0.266 Sum_probs=378.3
Q ss_pred hHHHHHHHHHHcCCCCeEEeCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 16 PLVFLERAATVYGDSPSIIYNN----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 16 l~~~l~~~a~~~p~~~al~~~~----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
+.+.|+++++.+|+++|+++.+ +++||+||.++++++|.+|.+. ++||+|+|+++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 7889999999999999999876 7899999999999999999998 799999999999999999999999999986
Q ss_pred eeccCC--------CCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCC
Q 044926 92 NTINTR--------LDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISD 163 (569)
Q Consensus 92 v~l~~~--------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (569)
++ ++. ...+++.+++..++++++|++......+...... + .+.+..
T Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---------~-~~~~~~--------------- 135 (525)
T PRK05851 82 SI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS---------V-TVHDLA--------------- 135 (525)
T ss_pred cC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc---------c-cccccc---------------
Confidence 53 332 2234566778999999999987655443322110 0 000000
Q ss_pred CcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCC-CCCEEEEecCchh
Q 044926 164 DQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVP-TQPVYLWTLPMFH 242 (569)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~-~~d~~~~~~pl~~ 242 (569)
........ .......++++++|+|||||||.||||.++|+++...+......+++. .+|++++..|++|
T Consensus 136 --------~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 205 (525)
T PRK05851 136 --------TAAHTNRS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYH 205 (525)
T ss_pred --------cccccccc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCcc
Confidence 00000000 000123567999999999999999999999999999888888888888 8999999999999
Q ss_pred hhhhhHHHHHHHhCceEEEecc--C--CHHHHHHHHHHhCcceeechhHHHHHHHcCCCC-CCCCCCcCCCceEEEeCCC
Q 044926 243 SNGWCFPWAMAAVGGTNICIRK--F--DASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP-DKKPLKLAKPVHLVTAGAP 317 (569)
Q Consensus 243 ~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~-~~~~~~~~~l~~~~~~g~~ 317 (569)
.+++...+.+++.|+++++.+. + ++..+++.++++++|++...|.++..+.+.... ....+ .++|.+++||++
T Consensus 206 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l--~~lr~~~~gG~~ 283 (525)
T PRK05851 206 DMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDL--GALRVALNGGEP 283 (525)
T ss_pred CccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCH--HHhheeEecccc
Confidence 9999888888999999988763 3 678899999999999886655555555443221 12233 489999999999
Q ss_pred CcHHHHHHHHh----cCC---eeeecccccccccceeecccccccc--cCc--HHHHhhhhcccCcccccceeeEEeCCC
Q 044926 318 PPAAVLLRTES----LGF---KVSHGYGLTETGGIVVSCAWKRNWN--LLP--AAEKAKLKARQGVKTTALTEVDVLDPK 386 (569)
Q Consensus 318 l~~~~~~~~~~----~~~---~i~~~YG~tE~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~g~~~~~~~~~~i~d~~ 386 (569)
+++++.+++.+ +++ .+++.||+||++..+.......... ... .........++|.|.++. +++|+|++
T Consensus 284 l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~ 362 (525)
T PRK05851 284 VDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGD 362 (525)
T ss_pred CCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCC
Confidence 99999888763 354 4999999999976554322110000 000 000112235789999998 99999986
Q ss_pred CCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHH
Q 044926 387 SGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVE 466 (569)
Q Consensus 387 ~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE 466 (569)
.+..++.| +.|||+++|++++.||+++++.+ .++||+|||+|+++ +|.++++||.+|+||++|++|+|.+||
T Consensus 363 ~~~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE 434 (525)
T PRK05851 363 GAAGVAGR--EIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIE 434 (525)
T ss_pred CCccCCCC--CeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHH
Confidence 66667776 89999999999999999988643 37899999999997 899999999999999999999999999
Q ss_pred HHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCC--ccccEEEEec--ccCCCCCCcc
Q 044926 467 SVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHY--MVPKTVVFMD--ELPKTSTGKI 542 (569)
Q Consensus 467 ~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~~~~--~iP~t~~GKi 542 (569)
.+|.+||+|.+++|++.+++.+++.+.++|+.... . .+.+++.++++++++.+ ++|..+++++ +||+|++||+
T Consensus 435 ~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~-~--~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi 511 (525)
T PRK05851 435 RVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFR-G--PDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKL 511 (525)
T ss_pred HHHHhCCCcccceEEEEEecCCCCceeEEEEEEec-C--cchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHH
Confidence 99999999999999999888777776666654321 1 34456677777777666 8999999998 8999999999
Q ss_pred cHHHHHHHHHh
Q 044926 543 QKFVLREIAEN 553 (569)
Q Consensus 543 ~r~~l~~~~~~ 553 (569)
+|++|++.+++
T Consensus 512 ~r~~L~~~~~~ 522 (525)
T PRK05851 512 RRLAVKRSLEA 522 (525)
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 81
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.8e-64 Score=526.07 Aligned_cols=490 Identities=19% Similarity=0.252 Sum_probs=405.3
Q ss_pred chHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeec
Q 044926 15 TPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTI 94 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 94 (569)
++.+.|.+.+..+|+++|+.+.++.+||+||.+++.++|.+|.+.|+++|++|+++++|+.+++++++||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhh
Q 044926 95 NTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLV 174 (569)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
++.++.+++.++++..+++.++++.+...... ...++.+.. .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~~~~~~~~~-----------------------~~~~~ 126 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV-----------GTQIITLSA-----------------------LEQAE 126 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc-----------CCceEEchH-----------------------hhhhh
Confidence 99999999999999999999999876432210 011221111 01111
Q ss_pred hcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHH
Q 044926 175 AKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAA 254 (569)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~ 254 (569)
....+ ........+++.++++|||||||.||+|.++|+++.....+....+++..++++++..|++|..++...+.+++
T Consensus 127 ~~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~ 205 (502)
T TIGR01734 127 TSGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLA 205 (502)
T ss_pred hhcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHH
Confidence 11110 11112245678999999999999999999999999988888888888999999999999999999988889999
Q ss_pred hCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hc-
Q 044926 255 VGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SL- 329 (569)
Q Consensus 255 ~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~- 329 (569)
.|+++++.++ .++..+++.+++++++.+.++|.++..+..........++ +++.++++|++++..+.+++. ++
T Consensus 206 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~--~l~~~~~~G~~~~~~~~~~~~~~~~ 283 (502)
T TIGR01734 206 SGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYP--HLTHFLFCGEELPVKTAKALLERFP 283 (502)
T ss_pred CCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCC--cccEEEEcCCcCCHHHHHHHHHHCC
Confidence 9999988865 5889999999999999999999999887765433334444 899999999999999999987 44
Q ss_pred CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccc
Q 044926 330 GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIM 409 (569)
Q Consensus 330 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~ 409 (569)
++.+++.||+||+++.+.......+ .........+|.+.+++ +++|+|+ ++..++.| +.|||+++|+.++
T Consensus 284 ~~~~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~vg~~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~ 353 (502)
T TIGR01734 284 KATIYNTYGPTEATVAVTSVKITQE------ILDQYPRLPIGFAKPDM-NLFIMDE-EGEPLPEG--EKGEIVIVGPSVS 353 (502)
T ss_pred CcEEEeCccCCcceEEEEEEEcccc------ccccCCccccccccCCC-EEEEECC-CCCCCCCC--CeeEEEEcccccc
Confidence 8899999999999765543321111 01112234689999998 9999998 57777777 8999999999999
Q ss_pred ccccCCccccccccC---CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecC-C
Q 044926 410 LGYLKDPIGTRKCMT---DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARP-D 485 (569)
Q Consensus 410 ~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~-~ 485 (569)
.||+++++.+...|. ..+||+|||+|+++++ ++++.||.+|+|+.+|++|+|.+||+.+.++|+|.++++++.. .
T Consensus 354 ~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~ 432 (502)
T TIGR01734 354 KGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNK 432 (502)
T ss_pred ccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcC
Confidence 999999988877653 2359999999999966 9999999999999999999999999999999999999999865 3
Q ss_pred CCCCceeEEEEEecCCCCC--CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHH
Q 044926 486 EFWGETPCAFVSLKEGSKS--KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAE 552 (569)
Q Consensus 486 ~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~ 552 (569)
...++.++++|+..+.... .....++++.++++++.+++|+.++++++||+|++||++|++|++++.
T Consensus 433 ~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 433 DHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred CCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 4446778888887654321 112377899999999999999999999999999999999999999864
No 82
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2.4e-63 Score=523.68 Aligned_cols=513 Identities=26% Similarity=0.356 Sum_probs=408.1
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
++-|+.++|+++++.+|+++|+.+.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 36699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEcccc--HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHS--RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+|++|..+.+++.++++.++++++|+++.. .....+..... ....+++........ .... ............
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 172 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKG----LLDRLIVCEDDNWGK-VGTP-QAPIPADPRIVT 172 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcc----cceEEEEeccccccc-cccc-ccccCCCccccc
Confidence 999999999999999999999999998632 11122211110 023333333221000 0000 000001111244
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc-----cCCCCCCCEEEEecCchhhh
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS-----DWSVPTQPVYLWTLPMFHSN 244 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~-----~~~~~~~d~~~~~~pl~~~~ 244 (569)
++++++....... .....++++++++|||||||.||+|.++|+++......... .......+++++..|++|.+
T Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 251 (541)
T TIGR03205 173 YADFVKGAAAPAE-WPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIY 251 (541)
T ss_pred HHHHHhcCCCCCC-CCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHH
Confidence 5555543222211 12245679999999999999999999999998754432111 11223457899999999998
Q ss_pred hhhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHH
Q 044926 245 GWCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVL 323 (569)
Q Consensus 245 g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~ 323 (569)
++.. .+.++..|++++....+++..+++.|+++++|++.++|+++..+++........+. +++.++.||+++++.+.
T Consensus 252 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~--~l~~i~~gg~~~~~~~~ 329 (541)
T TIGR03205 252 ALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLS--SLATIGSGGAPLPVEVA 329 (541)
T ss_pred HHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCcc--ccceEEEccccCCHHHH
Confidence 8766 55667788888777778999999999999999999999999999875433333444 89999999999999999
Q ss_pred HHHH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeC-CCCCcccCCCCCceeEE
Q 044926 324 LRTE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLD-PKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 324 ~~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d-~~~~~~~~~~~~~~Gel 401 (569)
++++ .++.++++.||+||++..+..+.... .....++|.+.++. .++|.+ .+.+..++.+ +.|||
T Consensus 330 ~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel 396 (541)
T TIGR03205 330 NFFERKTGLKLKSGWGMTETCSPGTGHPPEG----------PDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGEL 396 (541)
T ss_pred HHHHHHhCCCeecccccccCCcccccCCCCC----------CCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEE
Confidence 8887 46899999999999987665443111 11234688888887 877764 2466777766 89999
Q ss_pred EEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
+++|++++.||+++++.+...|. ++||+|||++++++||++++.||.+|+|+.+|+++++.+||.++.++++|.+++|+
T Consensus 397 ~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~ 475 (541)
T TIGR03205 397 RIRGPNVTRGYWNRPEESAEAFV-GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVI 475 (541)
T ss_pred EEecCCccccccCChhhhHhhhc-cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEE
Confidence 99999999999999998888887 78999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
+.+++..++.+++++++.++.. ..+.++++++++++|+.+++|..++++++||+|++||++|++|+
T Consensus 476 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 476 GIPDQYRGEAAKAFVKLRPGAK-PFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred ecCCcccCceEEEEEEECCCCC-cCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 9998877888889888876532 14678999999999999999999999999999999999999874
No 83
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.6e-64 Score=539.41 Aligned_cols=519 Identities=22% Similarity=0.255 Sum_probs=393.8
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYN----N-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
...|+.++|.+.++.+|+++|+.+. + +.+||+||.++++++|.+|.+.|+++||+|+|+++|+++|+++++
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4458999999999999999998642 1 357999999999999999999999999999999999999999999
Q ss_pred HhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHH-HHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCC
Q 044926 83 AVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA-LVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNI 161 (569)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (569)
||+++|+++||+++.++.+++.++++.++++++|++..... .+....... ..+..++.++........ ...
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~---~~l~~ii~~~~~~~~~~~-----~~~ 191 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSA---KRLKAIVSFTSVTEEESD-----KAS 191 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccC---CCceEEEEECCCChHHhh-----hhh
Confidence 99999999999999999999999999999999999865322 221111111 114455555432110000 000
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc-----CCCCCCCEEEE
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD-----WSVPTQPVYLW 236 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~-----~~~~~~d~~~~ 236 (569)
..+.....+++++..+........+..++|+++++|||||||.||||.+||+++...+...... .+++.+|++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls 271 (660)
T PLN02430 192 QIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLS 271 (660)
T ss_pred cCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEE
Confidence 0111134566666544322222223457899999999999999999999999998776654321 24678999999
Q ss_pred ecCchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCC-----C------------
Q 044926 237 TLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP-----D------------ 299 (569)
Q Consensus 237 ~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~-----~------------ 299 (569)
.+|++|.++....+.++..|+++.+... ++..+++.|.+++||++.++|.+++.+.+.... .
T Consensus 272 ~lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 350 (660)
T PLN02430 272 FLPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYK 350 (660)
T ss_pred eCcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 9999999998876667788888777654 788999999999999999999999887642100 0
Q ss_pred ------------C--CCC------------CcCCCceEEEeCCCCcHHHHHHHHhcC-Ceeeecccccccccceeecccc
Q 044926 300 ------------K--KPL------------KLAKPVHLVTAGAPPPAAVLLRTESLG-FKVSHGYGLTETGGIVVSCAWK 352 (569)
Q Consensus 300 ------------~--~~~------------~~~~l~~~~~~g~~l~~~~~~~~~~~~-~~i~~~YG~tE~~~~~~~~~~~ 352 (569)
. ..+ ..+++|.+++||+++++++.+.++.++ +.++++||+||+++.++.....
T Consensus 351 ~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~ 430 (660)
T PLN02430 351 YKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPD 430 (660)
T ss_pred HHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccc
Confidence 0 000 014899999999999999877777665 6899999999998766543211
Q ss_pred cccccCcHHHHhhhhcccCcccccceeeEEeCC-CCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeee
Q 044926 353 RNWNLLPAAEKAKLKARQGVKTTALTEVDVLDP-KSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYT 431 (569)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~-~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 431 (569)
......++|.|.+++ ++++.|. +.+. .+.+.+..|||+|+||+++.||+++++.+...|. +|||+|
T Consensus 431 ----------~~~~~gsvG~p~~~~-evki~d~~~~g~-~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~-dGw~~T 497 (660)
T PLN02430 431 ----------EMCMLGTVGAPAVYN-ELRLEEVPEMGY-DPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMK-DGWFHT 497 (660)
T ss_pred ----------cCCCCCCccCCCCce-EEEEEEcCCcCc-ccCCCCCcceEEecCCCccccccCChHHhhhhhh-ccceec
Confidence 011246789999998 9999873 2332 2223235799999999999999999999998886 999999
Q ss_pred cceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCC-------
Q 044926 432 GDVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSK------- 503 (569)
Q Consensus 432 GD~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~------- 503 (569)
||+|++++||++++.||.+|+|| .+|++|+|.+||.++.++|.|.+++|++.. .+..++++|++.+..-
T Consensus 498 GDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~ 574 (660)
T PLN02430 498 GDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDN 574 (660)
T ss_pred cceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhC
Confidence 99999999999999999999999 579999999999999999999999999853 2467888888764210
Q ss_pred -CCCC----------HHHHHHHH-----hccCCCCccccEEEEecc-c-----CCCCCCcccHHHHHHHHHhcC
Q 044926 504 -SKPT----------EKEMIEYC-----RGRLPHYMVPKTVVFMDE-L-----PKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 504 -~~~~----------~~~l~~~l-----~~~l~~~~~p~~~~~~~~-i-----P~t~~GKi~r~~l~~~~~~~~ 555 (569)
.... .+.+.+.+ ++.|+.+..++.+.+.++ + .+|+++|+.|+.+.+.|++.-
T Consensus 575 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i 648 (660)
T PLN02430 575 GFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEI 648 (660)
T ss_pred CCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHH
Confidence 0000 11222222 245999999999988753 3 489999999999998887654
No 84
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.3e-64 Score=585.64 Aligned_cols=495 Identities=19% Similarity=0.203 Sum_probs=412.1
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
..+..|+.++|.++++.+|+++|+++.++.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 454 ~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 454 EIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred CCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 34557899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccch
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFST 169 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (569)
+++|++|+.+.+++.++++.++++++|++......+... . ...+.....
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~----~~~~~~~~~----------------------- 582 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P----DLTSLCYNA----------------------- 582 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C----Cceeeeccc-----------------------
Confidence 999999999999999999999999999987654432110 0 000110000
Q ss_pred hhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHH
Q 044926 170 YESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFP 249 (569)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~ 249 (569)
...... ........++++++++|||||||.||||.++|+++.....+....++++.+|+++...|++|..++...
T Consensus 583 ---~~~~~~--~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~ 657 (1296)
T PRK10252 583 ---PLAPQG--AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEF 657 (1296)
T ss_pred ---cccccc--CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHH
Confidence 000000 001112356799999999999999999999999999999999889999999999999999999998888
Q ss_pred HHHHHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHH
Q 044926 250 WAMAAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRT 326 (569)
Q Consensus 250 ~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~ 326 (569)
+.+++.|+++++.++ .++..+++.++++++|++.++|+++..+++..........+.++|.+++||+.+++.+.+.+
T Consensus 658 ~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~ 737 (1296)
T PRK10252 658 FWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREW 737 (1296)
T ss_pred HHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHH
Confidence 999999999998763 68999999999999999999999999998764333221122389999999999999999998
Q ss_pred Hh-cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEec
Q 044926 327 ES-LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRG 405 (569)
Q Consensus 327 ~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~ 405 (569)
.+ +++++++.||+||++..++......... .........+|.|.++. .++|+|+ .+.+++.| +.|||+++|
T Consensus 738 ~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g 809 (1296)
T PRK10252 738 QQLTGAPLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTG 809 (1296)
T ss_pred HhcCCCEEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecc
Confidence 84 5899999999999986665443221100 00011235789999998 9999996 78888888 899999999
Q ss_pred CcccccccCCccccccccCC------CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeE
Q 044926 406 GCIMLGYLKDPIGTRKCMTD------DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAA 479 (569)
Q Consensus 406 ~~~~~gy~~~~~~~~~~~~~------~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~ 479 (569)
+.+++||+++++.+...|.. ++||+|||+|++++||.++++||.|++||++|++|++.+||.+|.++|+|.+++
T Consensus 810 ~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~ 889 (1296)
T PRK10252 810 IQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAV 889 (1296)
T ss_pred cccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceE
Confidence 99999999999999888853 349999999999999999999999999999999999999999999999999997
Q ss_pred EEecC----CCCCC--ceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 480 VVARP----DEFWG--ETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 480 v~~~~----~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
|+... +...| ..++++|+...+.. .+.++|+++++++|+.|++|..++.+++||+|++||++|++|++.
T Consensus 890 v~~~~~~~~~~~~~~~~~lva~v~~~~~~~--~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 890 THACVINQAAATGGDARQLVGYLVSQSGLP--LDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEEEeccccccCCCCccEEEEEEEcCCCCC--CCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 76542 11112 36888888776543 678899999999999999999999999999999999999999753
No 85
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-63 Score=521.97 Aligned_cols=486 Identities=26% Similarity=0.383 Sum_probs=389.7
Q ss_pred HHHHHHcCCCCeEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCC
Q 044926 21 ERAATVYGDSPSIIYN--NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRL 98 (569)
Q Consensus 21 ~~~a~~~p~~~al~~~--~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (569)
..+|..+|+++|+.+. ++.+||+||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 4577889999999874 57999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCC
Q 044926 99 DARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGD 178 (569)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (569)
+.+++.++++.+++++++++............. ....+.+..... . ...+++......
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~---------------~~~~~~~~~~~~ 141 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGAD------LPLRLSFGGEID-G---------------FGSFEAALAGAG 141 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc------cceEEEecCccc-c---------------cccHHHHhcccC
Confidence 999999999999999999987654332221111 111121111100 0 122332222111
Q ss_pred CCcccCCCCCCCCceEEEecCCCCCCCceEEE--chHHHHHHH----hhhhccCCCCCCCEEEEecCchhhhhhhHHHHH
Q 044926 179 PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVH--CHRGIFIVA----VNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 (569)
Q Consensus 179 ~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~--t~~~l~~~~----~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~ 252 (569)
+. .....++++++|||||||.||+|.+ +|.++.... ......+.+..+|+++...|++|..++...+..
T Consensus 142 ~~-----~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~ 216 (501)
T PRK13390 142 PR-----LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMV 216 (501)
T ss_pred CC-----CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHH
Confidence 10 0122357999999999999999996 455443321 112234677889999999999999988665566
Q ss_pred HHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCC
Q 044926 253 AAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGF 331 (569)
Q Consensus 253 ~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~ 331 (569)
+..|+++++.+.+++..+++.|+++++|++.++|+++..+.+..........+.++|.++.||++++..+.+.++ .++.
T Consensus 217 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~ 296 (501)
T PRK13390 217 HALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGP 296 (501)
T ss_pred HhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCC
Confidence 678999988888899999999999999999999999999887643322222234899999999999999999887 4688
Q ss_pred eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccccc
Q 044926 332 KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLG 411 (569)
Q Consensus 332 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 411 (569)
++++.||+||+++++.... .........+|.|.++ .++|+|+ ++.+++.| +.|||+++|++++.|
T Consensus 297 ~~~~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~g 361 (501)
T PRK13390 297 IVYEYYSSTEAHGMTFIDS----------PDWLAHPGSVGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPFR 361 (501)
T ss_pred ceeeeecccccCceEEecc----------hhhccCCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCcccc
Confidence 9999999999976543221 1111233578888887 5888986 77888877 899999999999999
Q ss_pred ccCCccccccccCC--CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCC
Q 044926 412 YLKDPIGTRKCMTD--DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWG 489 (569)
Q Consensus 412 y~~~~~~~~~~~~~--~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~ 489 (569)
|+++++.+...+.. ++|++|||+|++++||.+++.||.+++|+.+|.+|+|.+||++|.++++|.+++|++.+++..+
T Consensus 362 y~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~ 441 (501)
T PRK13390 362 YLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMG 441 (501)
T ss_pred ccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccC
Confidence 99999988877643 5799999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEEecCCCC-CCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 490 ETPCAFVSLKEGSK-SKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 490 ~~~~~~v~~~~~~~-~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
+.+++++++.++.. .+...++++++++++|+.+++|..++++++||+|++||++|++|+
T Consensus 442 e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 442 EQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred ceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 89999888776532 112356899999999999999999999999999999999999874
No 86
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.8e-63 Score=518.58 Aligned_cols=496 Identities=25% Similarity=0.339 Sum_probs=410.3
Q ss_pred hHHHHHHH-HHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeec
Q 044926 16 PLVFLERA-ATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTI 94 (569)
Q Consensus 16 l~~~l~~~-a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 94 (569)
-.++|.++ ++.+||++|+++.++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++|+
T Consensus 6 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 6 AEDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred HHHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 35666776 66799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhh
Q 044926 95 NTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLV 174 (569)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
++..+.+++.++++.++++++|++.+..+.+.+....... ...++........ ...+.+..
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------------~~~~~~~~ 146 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPH---LEHRVVVGRPEAG----------------EVQLAELL 146 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCC---ccEEEEeCCCCcc----------------cccHHHHh
Confidence 9999999999999999999999998877666555433321 2334433321100 12333333
Q ss_pred hcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhh-hhccCCCCCCCEEEEecCchhhhhhhH-HHHH
Q 044926 175 AKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVN-TLSDWSVPTQPVYLWTLPMFHSNGWCF-PWAM 252 (569)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~-~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~~~ 252 (569)
........ .....++++++++|||||||.||+|.++|+++...+.. ....+++..+|+++...|++|.+++.. .+.+
T Consensus 147 ~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 225 (508)
T TIGR02262 147 ATESEQFK-PAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFP 225 (508)
T ss_pred hcCCCccC-CCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHH
Confidence 22221111 12244679999999999999999999999999876655 345568899999999999999998865 4456
Q ss_pred HHhCceEEEecc-CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcC
Q 044926 253 AAVGGTNICIRK-FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLG 330 (569)
Q Consensus 253 ~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~ 330 (569)
+..|++.++.++ +++..+++.|+++++|++.++|.++..+.+......... .++|.++++|+.+++.+.+.+. .++
T Consensus 226 l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~--~~l~~~~~~G~~l~~~~~~~~~~~~~ 303 (508)
T TIGR02262 226 MSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQ--VRLRLCTSAGEALPAEVGQRWQARFG 303 (508)
T ss_pred HHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcccccccc--ccceeEEEcCCCCCHHHHHHHHHHhC
Confidence 778888877754 689999999999999999999999988876543322333 3899999999999999999888 579
Q ss_pred CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccc
Q 044926 331 FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIML 410 (569)
Q Consensus 331 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 410 (569)
+++++.||+||+++++..+... ......+|.|.++. .++|+| +++.+++.+ +.|||+++|+.++.
T Consensus 304 ~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d-~~~~~~~~g--~~Gel~i~~~~~~~ 368 (508)
T TIGR02262 304 VDIVDGIGSTEMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVG-DGGQDVAAG--EPGELLISGPSSAT 368 (508)
T ss_pred CchhhCccccccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEEC-CCCCCCCCC--CeeEEEEecCcccc
Confidence 9999999999998765543211 01134678899987 999999 578888877 89999999999999
Q ss_pred cccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCc
Q 044926 411 GYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGE 490 (569)
Q Consensus 411 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~ 490 (569)
||+++++.+...|. ++||+|||+++++++|.+++.||.+|+|+.+|.++++.+||+.|.++++|.++++++.++...++
T Consensus 369 gY~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 447 (508)
T TIGR02262 369 MYWNNRAKTRDTFQ-GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLI 447 (508)
T ss_pred ccCCCHHHhHhhhh-cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCc
Confidence 99999998888786 79999999999999999999999999999999999999999999999999999999988777777
Q ss_pred eeEEEEEecCCCC-CCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHH
Q 044926 491 TPCAFVSLKEGSK-SKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549 (569)
Q Consensus 491 ~~~~~v~~~~~~~-~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~ 549 (569)
.+.++++..++.. .+...+++++.++++++++++|..++++++||+|++||++|++|++
T Consensus 448 ~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 448 KPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred eeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccC
Confidence 8888888766542 1245788999999999999999999999999999999999999875
No 87
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.8e-64 Score=509.39 Aligned_cols=506 Identities=26% Similarity=0.338 Sum_probs=384.7
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhc
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYN----NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFA 87 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~----~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~ 87 (569)
...++..++.++++.+|+.+++.+. .+.+||+|+.+++.++|.+|+..|+.+||+|+|++.|+++|+++.+||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~ 93 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILAL 93 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 4567899999999999998898853 378999999999999999999999977999999999999999999999999
Q ss_pred cceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc-HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcc
Q 044926 88 AAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS-RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQF 166 (569)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (569)
|++.||+.++.+++++.++|++++++++|++... .+.........+. ........+....................
T Consensus 94 g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (613)
T COG1022 94 GAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPK---VVDLIVIIDLVREAVEAKALVLEVFPDEG 170 (613)
T ss_pred CCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccc---hhhhhhhhhhhhhccchhhcccccccccc
Confidence 9999999999999999999999999999999754 3333333332211 01111111100000000000000000000
Q ss_pred cchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC-CCCCCEEEEecCchhhhh
Q 044926 167 FSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS-VPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~-~~~~d~~~~~~pl~~~~g 245 (569)
...+ . ...........+..++|.|.|+|||||||.||||.+||+|+++++....+... ++++|+.++.+|+.|++.
T Consensus 171 ~~~~-~--~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~E 247 (613)
T COG1022 171 ISLF-L--IDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFE 247 (613)
T ss_pred chhh-h--hcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHH
Confidence 1111 0 11111112224577899999999999999999999999999999999999997 999999999999999999
Q ss_pred hhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCC----CC----------------------
Q 044926 246 WCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRD----PD---------------------- 299 (569)
Q Consensus 246 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~----~~---------------------- 299 (569)
..+.....+. +........++..++..+..++||++.++|.+|+.+-+-.. ..
T Consensus 248 r~~~~~~~~~-~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~ 326 (613)
T COG1022 248 RAFEGGLALY-GGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRA 326 (613)
T ss_pred HHHHHHHHhh-cceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh
Confidence 9875333333 33334445699999999999999999999999997654310 00
Q ss_pred ---------------------CCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCeeeecccccccccceeecccccccccC
Q 044926 300 ---------------------KKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLL 358 (569)
Q Consensus 300 ---------------------~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 358 (569)
+..+ ..++|.+++||+++++++...++..|+++.++||+||+.+.++.++..
T Consensus 327 ~~~~~~~~~~~~~d~LVf~Kir~~l-Ggri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~------ 399 (613)
T COG1022 327 LLGGGPLSWLLVADRLVFRKIRDAL-GGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPD------ 399 (613)
T ss_pred hcccCCcchhhhhhHHHHHHHHHHh-CCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEcccc------
Confidence 0011 258999999999999999999999999999999999998888775422
Q ss_pred cHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEe
Q 044926 359 PAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMH 438 (569)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 438 (569)
.....++|.|+|++ +++|.|. |||+|+||++|+|||++|+.|.+.|+.||||+|||+|.++
T Consensus 400 -----~~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d 460 (613)
T COG1022 400 -----RFVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELD 460 (613)
T ss_pred -----CcccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEc
Confidence 22456789999999 9999994 9999999999999999999999999999999999999999
Q ss_pred cCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC--------C--CC
Q 044926 439 SDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS--------K--PT 507 (569)
Q Consensus 439 ~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~--~~ 507 (569)
++|+|.+.||.+|+|+ .+|+.|.|+.||..+.++|.|.+.+|++..+ ..+.++|++..+.-. . .+
T Consensus 461 ~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k----~~~~AlIvp~~~~l~~~a~~~~~~~~~~ 536 (613)
T COG1022 461 EDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDK----KFLVALIVPDFDALEKWAESLNKVISAS 536 (613)
T ss_pred CCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCC----cceEEEEeCCHHHHHHHHHhccccccCC
Confidence 9999999999999999 8999999999999999999999999999433 346677776653211 0 01
Q ss_pred H------HHHHHHH-------hccCCCCccccEEEEec-ccC-----CCCCCcccHHHHHHHHHhc
Q 044926 508 E------KEMIEYC-------RGRLPHYMVPKTVVFMD-ELP-----KTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 508 ~------~~l~~~l-------~~~l~~~~~p~~~~~~~-~iP-----~t~~GKi~r~~l~~~~~~~ 554 (569)
. .++++.+ ...+..+..+..+++.. ++. .|++=|+.|..+.+.+++.
T Consensus 537 ~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~ 602 (613)
T COG1022 537 REELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDE 602 (613)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhH
Confidence 1 1122211 11234455666565542 333 6788999999988777654
No 88
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.1e-63 Score=532.11 Aligned_cols=503 Identities=18% Similarity=0.163 Sum_probs=391.1
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNN-----ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~-----~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
...+.|+.++|++++..+|+++|+++.+ +.+||+||.++++++|.+|.+.|+++||+|+++++|+++|++++|||
T Consensus 35 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 114 (614)
T PRK08180 35 GDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAA 114 (614)
T ss_pred CCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 3467899999999999999999998742 68999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCC-----HHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 85 PFAAAVLNTINTRLD-----ARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
+++|++++|++|.++ .+++.+++++++++++|++.... +.......... ...++.......
T Consensus 115 ~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~~--~~~~i~~~~~~~---------- 180 (614)
T PRK08180 115 MYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVPA--DVEVVAVRGAVP---------- 180 (614)
T ss_pred HHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhccC--CceEEEecCCCC----------
Confidence 999999999999998 79999999999999999975421 11111111110 122232221100
Q ss_pred CCCCCcccchhhHhhhcCCCCc--ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCC--CCCEEE
Q 044926 160 NISDDQFFSTYESLVAKGDPEF--EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVP--TQPVYL 235 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~--~~d~~~ 235 (569)
......+.+++....... .......++|+++|+|||||||.||||.+||+++..........+++. ..++++
T Consensus 181 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l 256 (614)
T PRK08180 181 ----GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLV 256 (614)
T ss_pred ----CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEE
Confidence 000134555544322111 111124568999999999999999999999999988877776666653 568999
Q ss_pred EecCchhhhhhhH-HHHHHHhCceEEEecc-CCH---HHHHHHHHHhCcceeechhHHHHHHHcCCCCCC--CCCCcCCC
Q 044926 236 WTLPMFHSNGWCF-PWAMAAVGGTNICIRK-FDA---SIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDK--KPLKLAKP 308 (569)
Q Consensus 236 ~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~-~~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~--~~~~~~~l 308 (569)
+.+|++|.+++.. .+.++..|+++++.+. +++ ..+++.++++++|+++++|.++..|.+...... ....++++
T Consensus 257 ~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l 336 (614)
T PRK08180 257 DWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRL 336 (614)
T ss_pred EecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccce
Confidence 9999999998755 5567788999888653 443 467889999999999999999999887532211 11123499
Q ss_pred ceEEEeCCCCcHHHHHHHHh-----c--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeE
Q 044926 309 VHLVTAGAPPPAAVLLRTES-----L--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVD 381 (569)
Q Consensus 309 ~~~~~~g~~l~~~~~~~~~~-----~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 381 (569)
|.+++||+++++++.+++.+ + ++++++.||+||+++++...... .....++|.|.+++ +++
T Consensus 337 r~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~ 404 (614)
T PRK08180 337 KLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC-EVK 404 (614)
T ss_pred eEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc-EEE
Confidence 99999999999999998874 2 37899999999998766543211 11345889999998 999
Q ss_pred EeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEE----ecCCcEEEeccCCCeEE-eC
Q 044926 382 VLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVM----HSDGYLEIKDRSKDVII-SG 456 (569)
Q Consensus 382 i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~----~~dg~l~~~GR~~~~i~-~~ 456 (569)
|+|+. ..|||+++|++++.||+++++.+...|..+|||+|||+|++ ++||++++.||.+|+|+ .+
T Consensus 405 i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~ 474 (614)
T PRK08180 405 LVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSS 474 (614)
T ss_pred EecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCC
Confidence 99851 45999999999999999999999988877899999999999 46899999999999888 68
Q ss_pred ceeee--HHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCC-------------CCCCHHHHHHHHhccCCC
Q 044926 457 GENLS--SVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSK-------------SKPTEKEMIEYCRGRLPH 521 (569)
Q Consensus 457 G~~v~--~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~~~~l~~~l~~~l~~ 521 (569)
|++++ +.++|.++.+||.|.+++|++.+++ .+.++|++.++.. ...+.++|+++++++|..
T Consensus 475 G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 550 (614)
T PRK08180 475 GTWVSVGPLRARAVSAGAPLVQDVVITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLAR 550 (614)
T ss_pred CcEecchhhhHHHHhhcCchhheEEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHH
Confidence 98777 7788899999999999999999875 3567777765410 012446788888777766
Q ss_pred Cc--------cccEEEEecccCCCC------CCcccHHHHHHHHHhcCC
Q 044926 522 YM--------VPKTVVFMDELPKTS------TGKIQKFVLREIAENMGS 556 (569)
Q Consensus 522 ~~--------~p~~~~~~~~iP~t~------~GKi~r~~l~~~~~~~~~ 556 (569)
++ +|..+++++++|+++ +||+.|+++.+.|++.-.
T Consensus 551 ~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~ 599 (614)
T PRK08180 551 LNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVE 599 (614)
T ss_pred HHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHH
Confidence 66 899999999999774 567899999888887653
No 89
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-63 Score=512.73 Aligned_cols=458 Identities=25% Similarity=0.343 Sum_probs=387.5
Q ss_pred HHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHH
Q 044926 24 ATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTV 103 (569)
Q Consensus 24 a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (569)
++..++++|+++.++.+||+||.++++++|..|. ++|+|+++++|+++++++++||+++|++++|+++..+.+++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l 84 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAER 84 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHH
Confidence 4456889999999999999999999999999996 47999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCCCCccc
Q 044926 104 SLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEW 183 (569)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (569)
.++++++++++++++.+... .. ...+...... ..+. .
T Consensus 85 ~~~l~~~~~~~il~~~~~~~------~~------~~~~~~~~~~--------------------~~~~-----------~ 121 (471)
T PRK07787 85 RHILADSGAQAWLGPAPDDP------AG------LPHVPVRLHA--------------------RSWH-----------R 121 (471)
T ss_pred HHHHHhcCCCEEEecCCccc------cc------ccceeeeccc--------------------cccc-----------c
Confidence 99999999999999863100 00 1111000000 0000 0
Q ss_pred CCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEe
Q 044926 184 IRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICI 262 (569)
Q Consensus 184 ~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~ 262 (569)
.....++++++++|||||||.||+|.++|+++...+......+++..+|++++.+|++|..|+.. .+.++..|++++..
T Consensus 122 ~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 201 (471)
T PRK07787 122 YPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHT 201 (471)
T ss_pred CCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEec
Confidence 01134679999999999999999999999999998888878888999999999999999999876 66778899999888
Q ss_pred ccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccc
Q 044926 263 RKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTE 341 (569)
Q Consensus 263 ~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE 341 (569)
+.+++..+++.++ +++|++.++|.++..+.+.... ...+. ++|.+++||+++++.+.+++. .++.++++.||+||
T Consensus 202 ~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~--~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 277 (471)
T PRK07787 202 GRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALR--GARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTE 277 (471)
T ss_pred CCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-ccccc--ceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccc
Confidence 8899999999999 9999999999999999875322 22333 899999999999999999988 47899999999999
Q ss_pred cccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcccccc
Q 044926 342 TGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRK 421 (569)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 421 (569)
++........ ......++|.|.++. .++|+|++ +.+++.+.++.|||+++|++++.||+++++.+..
T Consensus 278 ~~~~~~~~~~-----------~~~~~~~vG~~~~g~-~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~ 344 (471)
T PRK07787 278 TLITLSTRAD-----------GERRPGWVGLPLAGV-ETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAA 344 (471)
T ss_pred cCcceecCCC-----------CcccCCcccccCCCc-EEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchh
Confidence 9765433211 011235789999998 99999984 6666643225899999999999999999999998
Q ss_pred ccCCCCeeeecceEEEecCCcEEEeccC-CCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecC
Q 044926 422 CMTDDGWFYTGDVGVMHSDGYLEIKDRS-KDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKE 500 (569)
Q Consensus 422 ~~~~~~~~~TGD~~~~~~dg~l~~~GR~-~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~ 500 (569)
.|..++||+|||+|++++||++++.||. +++++.+|++|++.+||++|.+++.|.+++|++.+++..++.++++++..+
T Consensus 345 ~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~ 424 (471)
T PRK07787 345 AFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGAD 424 (471)
T ss_pred cccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCC
Confidence 8887899999999999999999999996 899999999999999999999999999999999998888888999888732
Q ss_pred CCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 501 GSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 501 ~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
. .+.+++.++++++++++++|..++++++||+|.+||++|++|+++
T Consensus 425 ~----~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 425 D----VAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred C----CCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 2 577899999999999999999999999999999999999999763
No 90
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-62 Score=515.94 Aligned_cols=505 Identities=26% Similarity=0.331 Sum_probs=407.0
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
.+|+.++|.++++++|+++|+.+.++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v 81 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPV 81 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
++++.++.+++.++++++++++++++.+....+.+....... ...++.++....... ......+++
T Consensus 82 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~ 147 (533)
T PRK07798 82 NVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPK---LRTLVVVEDGSGNDL-----------LPGAVDYED 147 (533)
T ss_pred ecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCC---ccEEEEecCCccccc-----------CCccccHHH
Confidence 999999999999999999999999998776666555332221 334555543321110 001245666
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---------CCC------CCCCEEEEe
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---------WSV------PTQPVYLWT 237 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---------~~~------~~~d~~~~~ 237 (569)
+++........ .....+.++++|||||||.||+|+++|+++.......... ..+ ..+++++..
T Consensus 148 ~~~~~~~~~~~--~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 148 ALAAGSPERDF--GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHhccCCcCCC--CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 65543322111 1223456799999999999999999999987654332211 111 567889999
Q ss_pred cCchhhhhhhHHHHHHHhCceEEEec--cCCHHHHHHHHHHhCcceeechhHHHH-HHHcCCC-CCCCCCCcCCCceEEE
Q 044926 238 LPMFHSNGWCFPWAMAAVGGTNICIR--KFDASIIFDLIRRHGVTHMCGAPVVLN-MLSNYRD-PDKKPLKLAKPVHLVT 313 (569)
Q Consensus 238 ~pl~~~~g~~~~~~~~~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~l~-~l~~~~~-~~~~~~~~~~l~~~~~ 313 (569)
.|++|..++...+.+++.|+++++.+ .+++..+++.++++++|.+.++|..+. .+.+... .....+ .++|.+++
T Consensus 226 ~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~--~~l~~i~~ 303 (533)
T PRK07798 226 PPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDL--SSLFAIAS 303 (533)
T ss_pred cchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCC--CceEEEEE
Confidence 99999999988889999999999998 789999999999999999999986543 3333322 222233 49999999
Q ss_pred eCCCCcHHHHHHHHh-c-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccC--cccccceeeEEeCCCCCc
Q 044926 314 AGAPPPAAVLLRTES-L-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQG--VKTTALTEVDVLDPKSGV 389 (569)
Q Consensus 314 ~g~~l~~~~~~~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~i~d~~~~~ 389 (569)
||+.+++.+.+++.+ + +..+++.||+||++.......... ....| .+.++. .++|+|+ ++.
T Consensus 304 gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~i~~~-~~~ 368 (533)
T PRK07798 304 GGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-------------AVHTGGPRFTIGP-RTVVLDE-DGN 368 (533)
T ss_pred CCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-------------CccCCCCccCCCc-eEEEECC-CCC
Confidence 999999999999884 5 789999999999965544321110 11222 455665 8999997 566
Q ss_pred ccCCCCCceeEEEEecCcccccccCCccccccccCC---CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHH
Q 044926 390 SAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTD---DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVE 466 (569)
Q Consensus 390 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE 466 (569)
+++.|....|+++ .++.++.||++++..+...|.. ++||+|||++++++||++++.||.+++++.+|++|++.+||
T Consensus 369 ~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE 447 (533)
T PRK07798 369 PVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVE 447 (533)
T ss_pred CCCCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHH
Confidence 7777632237666 4568999999999988877742 35999999999999999999999999999999999999999
Q ss_pred HHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHH
Q 044926 467 SVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFV 546 (569)
Q Consensus 467 ~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~ 546 (569)
++|.++++|.+++|++.+++..++.+.+++++.++.. .+.++++++++++++.+++|..++++++||+|.+||++|+.
T Consensus 448 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~ 525 (533)
T PRK07798 448 EALKAHPDVADALVVGVPDERWGQEVVAVVQLREGAR--PDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRW 525 (533)
T ss_pred HHHHhCccceeEEEEeccCcccCceEEEEEEECCCCC--CCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHH
Confidence 9999999999999999988877888888888876654 68899999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 044926 547 LREIAEN 553 (569)
Q Consensus 547 l~~~~~~ 553 (569)
|+++.++
T Consensus 526 ~~~~~~~ 532 (533)
T PRK07798 526 AKEQAAE 532 (533)
T ss_pred Hhhhhcc
Confidence 9998764
No 91
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.2e-62 Score=515.22 Aligned_cols=492 Identities=21% Similarity=0.264 Sum_probs=408.1
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
|++.++|++++..+|+++++...++.+||+||.++++++|.+|.+.|+.+|++|+++++|+.+++++++||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++.++.+++.++++..+++++|++.+... ... ....+... .+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~-----------------------~~~~~ 127 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPL--------EIL---GIPVITLD-----------------------ELKDI 127 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecccccc--------ccc---CCcEEehH-----------------------Hhhhh
Confidence 999999999999999999999999875410 000 01111110 01111
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMA 253 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~ 253 (569)
..... .........++++++++|||||||.||+|.++|+++.....+....+++..+++++...|++|..++...+.++
T Consensus 128 ~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l 206 (503)
T PRK04813 128 FATGN-PYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTL 206 (503)
T ss_pred hhccc-cccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHH
Confidence 10000 01111224567899999999999999999999999998888888888899999999999999999988888889
Q ss_pred HhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hc
Q 044926 254 AVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SL 329 (569)
Q Consensus 254 ~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~ 329 (569)
..|+++++.+. .++..+++.+++++++++..+|+++..+..........+. ++|.++++|+++++.+.+++. .+
T Consensus 207 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~--~l~~i~~~G~~l~~~~~~~~~~~~ 284 (503)
T PRK04813 207 ASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLP--NLTHFLFCGEELPHKTAKKLLERF 284 (503)
T ss_pred hcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCC--CceEEEEecCcCCHHHHHHHHHHC
Confidence 99999988865 5889999999999999999999999887655433344444 899999999999999999987 45
Q ss_pred -CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcc
Q 044926 330 -GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCI 408 (569)
Q Consensus 330 -~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 408 (569)
++.+++.||+||++..+.......+ ........++|.+.++. +++|+|. ++..++.+ +.|||+++|+++
T Consensus 285 ~~~~~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~ 354 (503)
T PRK04813 285 PSATIYNTYGPTEATVAVTSIEITDE------MLDQYKRLPIGYAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSV 354 (503)
T ss_pred CCceEEeCcccchheeEEEEEEeccc------ccccCCCCcccccCCCC-EEEEECC-CCCCCCCC--CceEEEEecccc
Confidence 7899999999999765544322211 01112234688899998 9999996 77777777 889999999999
Q ss_pred cccccCCccccccccC---CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCC
Q 044926 409 MLGYLKDPIGTRKCMT---DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPD 485 (569)
Q Consensus 409 ~~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 485 (569)
+.||+++++.+...|. +.+||+|||+|++ ++|++++.||.+|+|+.+|+++++.+||+.+.++|+|.+++|++.++
T Consensus 355 ~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 433 (503)
T PRK04813 355 SKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNK 433 (503)
T ss_pred ccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeC
Confidence 9999999988887763 2359999999999 89999999999999999999999999999999999999999999877
Q ss_pred CCCCceeEEEEEecCCCCC--CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 486 EFWGETPCAFVSLKEGSKS--KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 486 ~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
...++.++++++..++... ....++++++++++++.+++|..++++++||+|++||++|++|++++++
T Consensus 434 ~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 434 DHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred CCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 7667788888887654211 1233679999999999999999999999999999999999999998753
No 92
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.1e-62 Score=514.70 Aligned_cols=517 Identities=27% Similarity=0.376 Sum_probs=411.3
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
..++.++|+++++.+|+++|+++.++.+||.||.++++++|..|.+ .|+++|++|+++++|+++++++++||+++|+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 3579999999999999999999999999999999999999999985 799999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccc-----------cCCCCC
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSS-----------QSHHPN 160 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 160 (569)
+|++|..+.+++.++++.++++.++++.+..+.+.+...... ...++............ ....+.
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTP----VKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPK 177 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcC----cceEEEecccccccccccccccchhhhccccccc
Confidence 999999999999999999999999998776655554433221 12222211110000000 000000
Q ss_pred CCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCC---CCCCCEEEEe
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWS---VPTQPVYLWT 237 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~---~~~~d~~~~~ 237 (569)
.. ......+.+....+............+++++++|||||||.||+|.++|.++..+.......+. ....+.++..
T Consensus 178 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08974 178 YH-LPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTA 256 (560)
T ss_pred cc-CCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEe
Confidence 00 0001122222222211111112245789999999999999999999999999876654433332 3446678889
Q ss_pred cCchhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC
Q 044926 238 LPMFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG 315 (569)
Q Consensus 238 ~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g 315 (569)
+|++|.+++.. .+..+..|++.++.. ..++..+++.++++++|.+.++|+++..+.+........++ ++|.+++||
T Consensus 257 ~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~--~lr~~~~gg 334 (560)
T PRK08974 257 LPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFS--SLKLSVGGG 334 (560)
T ss_pred CcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCcc--ceeEEEecC
Confidence 99999988755 455567788776654 46888999999999999999999999999887644444444 899999999
Q ss_pred CCCcHHHHHHHHh-cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCC
Q 044926 316 APPPAAVLLRTES-LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRD 394 (569)
Q Consensus 316 ~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~ 394 (569)
+++++.+.+++++ +++++++.||+||++..+..+.... .....++|.|.+++ .++|+|+ ++..++.|
T Consensus 335 ~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g 402 (560)
T PRK08974 335 MAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDD-DGNEVPPG 402 (560)
T ss_pred ccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECC-CCCCCCCC
Confidence 9999999998884 6899999999999987766543211 11235789999998 9999997 67778777
Q ss_pred CCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCC
Q 044926 395 GSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPA 474 (569)
Q Consensus 395 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~ 474 (569)
+.|||+++|+.++.||+++++.+...|. ++||+|||+++++++|.+++.||.+|+|+++|.++++.+||++|.++++
T Consensus 403 --~~Gel~v~g~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~ 479 (560)
T PRK08974 403 --EPGELWVKGPQVMLGYWQRPEATDEVIK-DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPK 479 (560)
T ss_pred --CceEEEEecCCcchhhcCChhhhhhhhh-cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCC
Confidence 8999999999999999999988888785 8999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 475 VNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 475 i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
|.+++|++.+++..|+.++++++..+.. ...++++++++++++.+++|..+.++++||+|.+||++|++|+++..+.
T Consensus 480 v~~~~v~~~~~~~~g~~~~~~v~~~~~~---~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 480 VLEVAAVGVPSEVSGEAVKIFVVKKDPS---LTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred eeEEEEEeeecCCcceEEEEEEECCCCC---CCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhh
Confidence 9999999999888787777777654422 4678899999999999999999999999999999999999999877653
No 93
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-63 Score=533.93 Aligned_cols=512 Identities=21% Similarity=0.253 Sum_probs=385.7
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeC---------------------------CeeeeHHHHHHHHHHHHHHHHHcCCCCC
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYN---------------------------NITYTWSDTHHRCLQLASSLLSIGISRG 64 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~---------------------------~~~~Ty~el~~~v~~~A~~L~~~g~~~g 64 (569)
...|+.++|.++++.+||++|+.+. .+.+||+||.++++++|.+|.+.|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3458999999999999999999873 4789999999999999999999999999
Q ss_pred CEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEE
Q 044926 65 HVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLI 144 (569)
Q Consensus 65 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (569)
|+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++......+.......... ...++.+
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~--~~~ii~~ 224 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMP--NTTIIYL 224 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCC--ceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999876555443333221110 1234444
Q ss_pred eCCCcccccccCCCCCCCCCcccchhhHhhhcCC---CCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhh
Q 044926 145 SDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGD---PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVN 221 (569)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~ 221 (569)
+...... .........++++++.+. .......+..++|+++++|||||||.||||.+||+++...+..
T Consensus 225 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~ 295 (700)
T PTZ00216 225 DSLPASV---------DTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILA 295 (700)
T ss_pred CCCcccc---------ccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHH
Confidence 3211100 001112356777665541 1111122346789999999999999999999999999887766
Q ss_pred hhccC----C-CCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccCCHHHHHH-------HHHHhCcceeechhHHH
Q 044926 222 TLSDW----S-VPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFD-------LIRRHGVTHMCGAPVVL 289 (569)
Q Consensus 222 ~~~~~----~-~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~l~~~~~t~~~~~P~~l 289 (569)
....+ + +..+|++++.+|++|.+++......+..|+.+.+. ++..+++ .+++++||++.++|.++
T Consensus 296 ~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~ 372 (700)
T PTZ00216 296 LEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIF 372 (700)
T ss_pred HHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHH
Confidence 55433 2 46789999999999999987655555566655442 4555554 68899999999999999
Q ss_pred HHHHcCCCCC-------------------------CCCC--------------CcCCCceEEEeCCCCcHHHHHHHHh-c
Q 044926 290 NMLSNYRDPD-------------------------KKPL--------------KLAKPVHLVTAGAPPPAAVLLRTES-L 329 (569)
Q Consensus 290 ~~l~~~~~~~-------------------------~~~~--------------~~~~l~~~~~~g~~l~~~~~~~~~~-~ 329 (569)
+.+.+..... .... ..+++|.+++||+++++++.+.++. +
T Consensus 373 ~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~ 452 (700)
T PTZ00216 373 DTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF 452 (700)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh
Confidence 8876431100 0000 0147999999999999999987774 4
Q ss_pred CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCc-ccCCCCCceeEEEEecCcc
Q 044926 330 GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGV-SAKRDGSTLGEIVLRGGCI 408 (569)
Q Consensus 330 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~-~~~~~~~~~Gel~v~~~~~ 408 (569)
+ +++++||+||+++.++..... .....++|.|.+++ +++|+|.++.. ...++ ..|||+|+|+++
T Consensus 453 ~-~l~~~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v 517 (700)
T PTZ00216 453 G-MVIQGWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFL 517 (700)
T ss_pred h-hHhhccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCcc
Confidence 6 999999999997655432110 11246899999999 99999975422 12223 579999999999
Q ss_pred cccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCccee--EEEecCC
Q 044926 409 MLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEA--AVVARPD 485 (569)
Q Consensus 409 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~--~v~~~~~ 485 (569)
+.||+++|+.+...|..+|||+|||+|++++||++++.||.+|+|| .+|++|+|.+||.++.++|.|.++ +|++.++
T Consensus 518 ~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~ 597 (700)
T PTZ00216 518 FKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA 597 (700)
T ss_pred cchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC
Confidence 9999999999999998899999999999999999999999999999 899999999999999999999973 4444432
Q ss_pred CCCCceeEEEEEecCCC--------CCCCC----------HHHHHHHH-----hccCCCCccccEEEEecc------cCC
Q 044926 486 EFWGETPCAFVSLKEGS--------KSKPT----------EKEMIEYC-----RGRLPHYMVPKTVVFMDE------LPK 536 (569)
Q Consensus 486 ~~~~~~~~~~v~~~~~~--------~~~~~----------~~~l~~~l-----~~~l~~~~~p~~~~~~~~------iP~ 536 (569)
...++++|++.... .-... .+.+.+.+ ++.+..+..++.|.++.+ =-+
T Consensus 598 ---~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~l 674 (700)
T PTZ00216 598 ---RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVL 674 (700)
T ss_pred ---CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCC
Confidence 24577887764310 00000 11222222 245778889998888742 237
Q ss_pred CCCCcccHHHHHHHHHhcC
Q 044926 537 TSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 537 t~~GKi~r~~l~~~~~~~~ 555 (569)
|+++|+.|+.+++.|++.-
T Consensus 675 T~t~K~~R~~i~~~y~~~i 693 (700)
T PTZ00216 675 TAAMKLKRRVIDERYADLI 693 (700)
T ss_pred ChhhccchHHHHHHHHHHH
Confidence 9999999999999998754
No 94
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.8e-62 Score=509.31 Aligned_cols=497 Identities=26% Similarity=0.361 Sum_probs=404.1
Q ss_pred HHHHHHHcCCCCeEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC
Q 044926 20 LERAATVYGDSPSIIY--NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR 97 (569)
Q Consensus 20 l~~~a~~~p~~~al~~--~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 97 (569)
...+++.+|+++|+++ .++.+||+||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3577889999999987 46789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcC
Q 044926 98 LDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKG 177 (569)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (569)
.+.+++.++++.++++.++++........+....... ....+.+....... ....+.+.....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 145 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPG---VRHRLVLDGDGELE--------------GFVGYAEAVAGL 145 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCC---ceEEEEecCCCCCc--------------ccccHHHHhcCC
Confidence 9999999999999999999998776655544433221 12233332211000 012233322211
Q ss_pred CCCcccCCCCCCCCceEEEecCCCCCCCceEEEc--hHHHHH---HHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHH
Q 044926 178 DPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHC--HRGIFI---VAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 (569)
Q Consensus 178 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t--~~~l~~---~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~ 252 (569)
.. ......++.++++|||||||.||+|.++ |.++.. ........+++...+++++..|++|..++...+..
T Consensus 146 ~~----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~ 221 (511)
T PRK13391 146 PA----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLV 221 (511)
T ss_pred CC----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHH
Confidence 11 0112344678999999999999999964 555432 22334455677889999999999999998888888
Q ss_pred HHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCC
Q 044926 253 AAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGF 331 (569)
Q Consensus 253 ~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~ 331 (569)
+..|+++++.+.+++..+++.++++++|++.++|+++..+.+..........+.+++.+++||+++++++.+++. .++.
T Consensus 222 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~ 301 (511)
T PRK13391 222 IRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGP 301 (511)
T ss_pred HHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCC
Confidence 899999999988999999999999999999999999998887643333232344999999999999999999988 4688
Q ss_pred eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccccc
Q 044926 332 KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLG 411 (569)
Q Consensus 332 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~g 411 (569)
.+++.||+||++++...... ........+|.+.++ .++|+|. ++..++.| +.|||+++|+ ++.|
T Consensus 302 ~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~vG~~~~g--~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~~g 365 (511)
T PRK13391 302 IIHEYYAATEGLGFTACDSE----------EWLAHPGTVGRAMFG--DLHILDD-DGAELPPG--EPGTIWFEGG-RPFE 365 (511)
T ss_pred ceeeeeccccccceEEecCc----------cccccCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecC-cceE
Confidence 99999999999876543211 011223577888887 5888996 67777776 8899999999 8999
Q ss_pred ccCCccccccccCCC-CeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCc
Q 044926 412 YLKDPIGTRKCMTDD-GWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGE 490 (569)
Q Consensus 412 y~~~~~~~~~~~~~~-~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~ 490 (569)
|+++++.+...+..+ +||+|||+|+++++|.+++.||.+|+++.+|.++++.+||++|.++|.|.+++|++.++...|+
T Consensus 366 y~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~ 445 (511)
T PRK13391 366 YLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGE 445 (511)
T ss_pred EcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCc
Confidence 999998888777644 8999999999999999999999999999999999999999999999999999999999988888
Q ss_pred eeEEEEEecCCCC-CCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 491 TPCAFVSLKEGSK-SKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 491 ~~~~~v~~~~~~~-~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
.++++++..++.. .+...++++++++++++.+++|..+.+++++|+|++||++|+.|++.+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 446 EVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 8888888765432 12345889999999999999999999999999999999999999998865
No 95
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-61 Score=507.92 Aligned_cols=498 Identities=24% Similarity=0.350 Sum_probs=401.1
Q ss_pred CeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhc
Q 044926 31 PSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHC 110 (569)
Q Consensus 31 ~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (569)
.|+...++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++++++|..+.+++.++++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCC-CCCCcccchhhHhhhcCCCCcccCCCCCC
Q 044926 111 QSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPN-ISDDQFFSTYESLVAKGDPEFEWIRPRTE 189 (569)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (569)
+++++|++......+.+.... ...++......... ......+. .........+++++..... ......
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 151 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPA------GVTVLSVPTPPEIA-AAYRISPALLTPPAGAIDWEGWLAQQEP----YDGPPV 151 (509)
T ss_pred CCcEEEEccchhhhhhhhhhc------ccceeecccccccc-cccccccccccCCCCccCHHHHhcccCc----cCCCCC
Confidence 999999988766544332211 01111111110000 00000000 0001112345544432211 112356
Q ss_pred CCceEEEecCCCCCCCceEEEchHH---HHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccCC
Q 044926 190 WDPIVLNYTSGTTMSPKGVVHCHRG---IFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFD 266 (569)
Q Consensus 190 ~~~a~i~~TSGtTG~pk~v~~t~~~---l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~ 266 (569)
+++++++|||||||.||+|.++|.. +..........+++..++++++..|++|..+....+.++..|+++++.+.++
T Consensus 152 ~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 231 (509)
T PRK12406 152 PQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFD 231 (509)
T ss_pred CCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCC
Confidence 7999999999999999999987654 3333444455678899999999999999988877777888899998888889
Q ss_pred HHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-cCCeeeecccccccccc
Q 044926 267 ASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES-LGFKVSHGYGLTETGGI 345 (569)
Q Consensus 267 ~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~ 345 (569)
+..+++.++++++|.+.++|.++..+++..........+.++|.+++||+++++++++++.+ +++.+++.||+||++.+
T Consensus 232 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 311 (509)
T PRK12406 232 PEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAV 311 (509)
T ss_pred HHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCce
Confidence 99999999999999999999999999876543222233349999999999999999999884 68999999999999876
Q ss_pred eeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccc-cccCCccccccccC
Q 044926 346 VVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIML-GYLKDPIGTRKCMT 424 (569)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~~~~~ 424 (569)
+..+.. ........+|.+.++. .++++|+ ++..++.| +.|||+++|+.++. ||+++++.+...+.
T Consensus 312 ~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~~~~ 377 (509)
T PRK12406 312 TFATSE----------DALSHPGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAEIDR 377 (509)
T ss_pred EecCcc----------cccccCCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhcccccC
Confidence 553321 1111234689999988 9999997 67878777 89999999998875 99998887776665
Q ss_pred CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC
Q 044926 425 DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS 504 (569)
Q Consensus 425 ~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 504 (569)
++||+|||++++++||.+++.||.+|+||++|.+|++.+||+.|.++++|.++++++.++...++.+++++++.++..
T Consensus 378 -~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~- 455 (509)
T PRK12406 378 -GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGAT- 455 (509)
T ss_pred -CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCC-
Confidence 899999999999999999999999999999999999999999999999999999999998877888888888876544
Q ss_pred CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCC
Q 044926 505 KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 505 ~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
...+++++.++++++++++|..++++++||+|.+||++|++|++.+.+...
T Consensus 456 -~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~~ 506 (509)
T PRK12406 456 -LDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANAG 506 (509)
T ss_pred -CCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhcc
Confidence 578999999999999999999999999999999999999999998887653
No 96
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.4e-63 Score=621.45 Aligned_cols=485 Identities=20% Similarity=0.222 Sum_probs=414.8
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
+.++.++|.++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|++|.++.+++.+++++++++++|++......+. ... ...++.++....
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~-------~~~-~~~~~~~~~~~~----------------------- 638 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP-------LAA-GVQVLDLDRPAA----------------------- 638 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC-------ccc-CceEEEecCcch-----------------------
Confidence 9999999999999999999999999876433211 000 122222221100
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHH
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~ 252 (569)
.+.... .........++++++|+|||||||.||||.++|+++...+.+....++++.+|+++...|++|..++...+.+
T Consensus 639 ~~~~~~-~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~ 717 (5163)
T PRK12316 639 WLEGYS-EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWP 717 (5163)
T ss_pred hhccCC-CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHH
Confidence 000000 0111122457899999999999999999999999999999999899999999999999999999999889999
Q ss_pred HHhCceEEEec---cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-h
Q 044926 253 AAVGGTNICIR---KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-S 328 (569)
Q Consensus 253 ~~~g~~~~~~~---~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~ 328 (569)
++.|+++++.+ .+++..+++.++++++|++.++|+++..|.+... ...+. ++|.+++||+++++++.+.+. .
T Consensus 718 L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~--~l~~~~~gGe~l~~~~~~~~~~~ 793 (5163)
T PRK12316 718 LMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCT--SLRRIVCSGEALPADAQEQVFAK 793 (5163)
T ss_pred HhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCC--CccEEEEeeccCCHHHHHHHHHh
Confidence 99999999985 3789999999999999999999999999987532 22344 899999999999999999886 3
Q ss_pred c-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCc
Q 044926 329 L-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGC 407 (569)
Q Consensus 329 ~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~ 407 (569)
+ ++++++.||+||++..++..... ........+|.|.+++ +++|+|+ ++.+++.| +.|||+|+|+.
T Consensus 794 ~~~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~ 860 (5163)
T PRK12316 794 LPQAGLYNLYGPTEAAIDVTHWTCV---------EEGGDSVPIGRPIANL-ACYILDA-NLEPVPVG--VLGELYLAGRG 860 (5163)
T ss_pred CCCCeEEeCcCcChheeeeeEEecc---------cccCCCCCCccccCCC-EEEEECC-CCCCCCCC--CceEEEecccc
Confidence 3 78999999999997554433211 0112235789999998 9999997 67888887 89999999999
Q ss_pred ccccccCCccccccccC------CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 408 IMLGYLKDPIGTRKCMT------DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 408 ~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
+++||+++++.+...|. +++||+|||+|++++||.+++.||.||+||++|++|+|.+||.+|.++|+|.+++|+
T Consensus 861 v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~ 940 (5163)
T PRK12316 861 LARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVL 940 (5163)
T ss_pred cChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEE
Confidence 99999999999988874 245999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHH
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAE 552 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~ 552 (569)
+.+ ++.++++|+..++.. ...++++++++++|+.|++|..++++++||+|++||++|++|.+...
T Consensus 941 ~~~----~~~lva~vv~~~~~~--~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 941 AVD----GKQLVGYVVLESEGG--DWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred EcC----CCeEEEEEEccCCCC--CCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCccc
Confidence 986 577999999876654 67889999999999999999999999999999999999999976543
No 97
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-62 Score=505.51 Aligned_cols=453 Identities=25% Similarity=0.307 Sum_probs=385.4
Q ss_pred chHHHH-HHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEee
Q 044926 15 TPLVFL-ERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNT 93 (569)
Q Consensus 15 tl~~~l-~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (569)
++.+++ ..+++.+|+++|+++.++.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~ 82 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLP 82 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEee
Confidence 344444 5668999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHh
Q 044926 94 INTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESL 173 (569)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (569)
+++..+.+++.++++++++++++++++.... .. ..... . . .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~----------~~~~~-~-----------------------~---~- 123 (458)
T PRK09029 83 LNPQLPQPLLEELLPSLTLDFALVLEGENTF-SA----------LTSLH-L-----------------------Q---L- 123 (458)
T ss_pred cCCCCCHHHHHHHHHhcCCCEEEEcCcccch-hh----------ccccc-c-----------------------c---c-
Confidence 9999999999999999999999998764321 00 00000 0 0 0
Q ss_pred hhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHH
Q 044926 174 VAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMA 253 (569)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~ 253 (569)
.. ........++++++++|||||||.||+|.++|++++..+......+++..+|+++...|++|.+++...+.++
T Consensus 124 --~~---~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l 198 (458)
T PRK09029 124 --VE---GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWL 198 (458)
T ss_pred --cc---ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHH
Confidence 00 0000124567899999999999999999999999999988888888999999999999999999988777788
Q ss_pred HhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCee
Q 044926 254 AVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKV 333 (569)
Q Consensus 254 ~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i 333 (569)
+.|+++++.+. ..+++.+. ++|.+..+|+++..+...... .. ++|.+++||+.+++.+.+.+.++++++
T Consensus 199 ~~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~--~l~~i~~gG~~~~~~~~~~~~~~g~~~ 267 (458)
T PRK09029 199 YAGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PL--SLKAVLLGGAAIPVELTEQAEQQGIRC 267 (458)
T ss_pred hCCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CC--cceEEEECCCCCCHHHHHHHHHcCCcE
Confidence 89998887654 55677774 789999999999998876432 22 789999999999999999988889999
Q ss_pred eecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCccccccc
Q 044926 334 SHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYL 413 (569)
Q Consensus 334 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~ 413 (569)
++.||+||++........ ....++|.|.+++ .++|.+ |||+++|+.++.||+
T Consensus 268 ~~~YG~tE~~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~ 319 (458)
T PRK09029 268 WCGYGLTEMASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYW 319 (458)
T ss_pred eccccccccCcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeee
Confidence 999999999765432210 1124588999888 888765 899999999999999
Q ss_pred CCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeE
Q 044926 414 KDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPC 493 (569)
Q Consensus 414 ~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~ 493 (569)
++++.+.... .++||+|||+|+++ ||.+++.||.+|+|+++|.+|+|.+||+.|.++|+|.+++|++.+++.+|+.++
T Consensus 320 ~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 397 (458)
T PRK09029 320 RQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPV 397 (458)
T ss_pred cCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEE
Confidence 9887765443 37899999999999 999999999999999999999999999999999999999999999998889999
Q ss_pred EEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCC
Q 044926 494 AFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 494 ~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
++|+.... .+.++|+++++++++.|++|..+++++++|+|.+||++|+.|++++.+...
T Consensus 398 a~v~~~~~----~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~ 456 (458)
T PRK09029 398 AVVESDSE----AAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLG 456 (458)
T ss_pred EEEEcCcc----cCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccC
Confidence 98887632 577899999999999999999999999999999999999999999987653
No 98
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=7.5e-63 Score=504.79 Aligned_cols=429 Identities=19% Similarity=0.232 Sum_probs=358.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEE
Q 044926 39 TYTWSDTHHRCLQLASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFV 117 (569)
Q Consensus 39 ~~Ty~el~~~v~~~A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (569)
.+.|+||.++++++|.+|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred ccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEe
Q 044926 118 DFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNY 197 (569)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 197 (569)
+.+..... . .. .. .. .....++++++++|
T Consensus 99 ~~~~~~~~------------------~--~~-------------------~~------~~------~~~~~~~~~~~i~~ 127 (452)
T PRK07445 99 LDQLKLSH------------------P--PP-------------------LP------SQ------GILPNLETGWIMIP 127 (452)
T ss_pred cCcccccc------------------C--CC-------------------CC------cc------ccCCCCCCcEEEEe
Confidence 76532100 0 00 00 00 00124578999999
Q ss_pred cCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHh
Q 044926 198 TSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRH 277 (569)
Q Consensus 198 TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 277 (569)
||||||.||+|.+||+++...+......+++.. ++.++.+|++|.+|+...+.+++.|+++++.+............++
T Consensus 128 TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~ 206 (452)
T PRK07445 128 TGGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNP 206 (452)
T ss_pred CCCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhc
Confidence 999999999999999999888777766666654 4678899999999998888889999999887643222223444578
Q ss_pred CcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCeeeecccccccccceeeccccccccc
Q 044926 278 GVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNL 357 (569)
Q Consensus 278 ~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~ 357 (569)
+++++.++|+++..+.+.. ...+. ++|.+++||+++++...+.+.++++++++.||+||++..+.....
T Consensus 207 ~~t~~~~vP~~l~~l~~~~---~~~l~--~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~------ 275 (452)
T PRK07445 207 SDFFLSLVPTQLQRLLQLR---PQWLA--QFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKP------ 275 (452)
T ss_pred CceEEEehHHHHHHHHhhC---hhhhh--cceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCc------
Confidence 8999999999999988631 22333 899999999999999999888779999999999998765443210
Q ss_pred CcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEE
Q 044926 358 LPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVM 437 (569)
Q Consensus 358 ~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~ 437 (569)
........++|.|.++. +++|+ .+ +.|||+++|+.++.||++++. ..++||+|||+|++
T Consensus 276 ---~~~~~~~~~~G~~~p~~-~v~i~---------~g--~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~ 334 (452)
T PRK07445 276 ---DDFLAGNNSSGQVLPHA-QITIP---------AN--QTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYL 334 (452)
T ss_pred ---hhhccCCCcCCccCCCC-eEEEc---------CC--CcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEE
Confidence 11111234689999988 88887 12 679999999999999997532 23789999999999
Q ss_pred ecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhc
Q 044926 438 HSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRG 517 (569)
Q Consensus 438 ~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~ 517 (569)
++||++++.||.+|+|+.+|++|+|.+||++|.++|+|.+++|++.+++..|+.++++++..++. .+.+++++++++
T Consensus 335 d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~---~~~~~l~~~~~~ 411 (452)
T PRK07445 335 DAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS---ISLEELKTAIKD 411 (452)
T ss_pred cCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC---CCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999998876552 467899999999
Q ss_pred cCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhc
Q 044926 518 RLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 518 ~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
+++.+++|..++++++||+|++||++|++|++++.+.
T Consensus 412 ~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 412 QLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred hCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHh
Confidence 9999999999999999999999999999999988764
No 99
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-63 Score=620.69 Aligned_cols=490 Identities=20% Similarity=0.228 Sum_probs=415.3
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
+.++.++|.++++.+|+++|+++.++.+||+||+++++++|..|.+.|+++|++|+|+++|+++++++++||+++|+++|
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|++|.++.+++.+++++++++++|++.+....+.. .. ....+.+.... .+.
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-------~~-~~~~~~~~~~~--------------------~~~- 2132 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPL-------PA-GVARLPLDRDA--------------------EWA- 2132 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhccc-------cc-ccceEeccchh--------------------hhh-
Confidence 99999999999999999999999998765432210 00 01111111100 000
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHH
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~ 252 (569)
... ...+.....++++++|+|||||||.||||.++|+++...+......++++.+|+++...|++|..++...+.+
T Consensus 2133 --~~~--~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~ 2208 (5163)
T PRK12316 2133 --DYP--DTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHP 2208 (5163)
T ss_pred --ccC--ccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHH
Confidence 000 0011123567899999999999999999999999999999998889999999999999999999988888999
Q ss_pred HHhCceEEEecc--CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-c
Q 044926 253 AAVGGTNICIRK--FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES-L 329 (569)
Q Consensus 253 ~~~g~~~~~~~~--~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~-~ 329 (569)
++.|+++++.+. +++..+++.++++++|++.++|+++..+.+....... .. ++|.+++|||+++++..+++.+ +
T Consensus 2209 L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~-~~--~lr~~~~gGe~l~~~~~~~~~~~~ 2285 (5163)
T PRK12316 2209 LLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGR-PP--AVRVYCFGGEAVPAASLRLAWEAL 2285 (5163)
T ss_pred HhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccC-Cc--ceeEEEEecccCCHHHHHHHHHhC
Confidence 999999966653 6899999999999999999999999999876533222 22 8999999999999999999874 3
Q ss_pred -CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcc
Q 044926 330 -GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCI 408 (569)
Q Consensus 330 -~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~ 408 (569)
+..+++.||+||++..++....... ........++|.|.++. .++|+|+ ++..++.| ++|||+|+|+.+
T Consensus 2286 ~~~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v 2355 (5163)
T PRK12316 2286 RPVYLFNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGL 2355 (5163)
T ss_pred CCcEEEECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhh
Confidence 6889999999999766554321110 00011124689999998 9999997 67888888 899999999999
Q ss_pred cccccCCccccccccCC-------CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEE
Q 044926 409 MLGYLKDPIGTRKCMTD-------DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVV 481 (569)
Q Consensus 409 ~~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 481 (569)
++||+++|+.+...|.. ++||+|||+|++++||.++++||.|++||++|++|++.+||.+|.++|+|.+++|+
T Consensus 2356 ~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~ 2435 (5163)
T PRK12316 2356 ARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVV 2435 (5163)
T ss_pred cccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEE
Confidence 99999999999988842 35999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHH
Q 044926 482 ARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA 551 (569)
Q Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~ 551 (569)
+.++. .++.++++|+..++.. ...++++++++++||.|++|..++.+++||+|++||++|++|++..
T Consensus 2436 ~~~~~-~~~~l~a~v~~~~~~~--~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2436 AQDGA-SGKQLVAYVVPDDAAE--DLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred EEecC-CCeEEEEEEEecCCCc--cCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 98766 5788999999877654 6789999999999999999999999999999999999999997653
No 100
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-62 Score=488.79 Aligned_cols=506 Identities=26% Similarity=0.378 Sum_probs=418.6
Q ss_pred HHHHHHHHc-CCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 19 FLERAATVY-GDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 19 ~l~~~a~~~-p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
.+.++.+.. ++.+++++.+ ..+||.|+.+++.++|..|.+.|+++||+|++++|+.++++++++||+++|++.
T Consensus 69 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~ 148 (626)
T KOG1175|consen 69 CLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIH 148 (626)
T ss_pred hhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEE
Confidence 344443333 8889998853 459999999999999999998899999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccH---------HHHHHHHhcCCCCCC-CCCEEEEeCCCcccccccCCCCCC
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSR---------ALVREAVSLFPPDLK-PPPLVLISDDDDAAVSSQSHHPNI 161 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 161 (569)
+++-..+++.++...++.++++++|+.+... ....++......... ....+.+.....
T Consensus 149 ~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------------ 216 (626)
T KOG1175|consen 149 SSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNR------------ 216 (626)
T ss_pred EEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccc------------
Confidence 9999999999999999999999999976432 222222222221110 011111111110
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHH-HHHHHhhhhccCCCCCCCEEEEecCc
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRG-IFIVAVNTLSDWSVPTQPVYLWTLPM 240 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~-l~~~~~~~~~~~~~~~~d~~~~~~pl 240 (569)
...+++.+....+... +...+.+|+.+|+|||||||.||++.+++.. ++..+......+.++++|++++....
T Consensus 217 -----d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~ 290 (626)
T KOG1175|consen 217 -----DLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDL 290 (626)
T ss_pred -----cccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEeccc
Confidence 1344555444444443 4557788999999999999999999999876 45555666667889999999999999
Q ss_pred hhhhhhhH-HHHHHHhCceEEEec--cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCC
Q 044926 241 FHSNGWCF-PWAMAAVGGTNICIR--KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAP 317 (569)
Q Consensus 241 ~~~~g~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~ 317 (569)
-|+.+.++ .++.++.|+++++.+ ++++..+++.+.++++|++++.|+.++.|.+.........++.+||.+.+.||+
T Consensus 291 GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gep 370 (626)
T KOG1175|consen 291 GWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEP 370 (626)
T ss_pred CeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCcc
Confidence 99998887 566899999999885 469999999999999999999999999888887666555555589999999999
Q ss_pred CcHHHHHHHH-hcCC-eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCC
Q 044926 318 PPAAVLLRTE-SLGF-KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDG 395 (569)
Q Consensus 318 l~~~~~~~~~-~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~ 395 (569)
+.++...++. .++. +|++.||+||+|+.++.+..... ...+.+.+.|.++. .+.|+|+ +|+.++.++
T Consensus 371 i~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de-~g~~~~~~~ 439 (626)
T KOG1175|consen 371 INPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDE-NGNELPPST 439 (626)
T ss_pred CCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECC-CCCCcCCCC
Confidence 9999999998 5666 69999999999999998754321 34567889999999 9999998 788887765
Q ss_pred CceeEEEEecC---cccccccCCccccccccC--CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926 396 STLGEIVLRGG---CIMLGYLKDPIGTRKCMT--DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY 470 (569)
Q Consensus 396 ~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~ 470 (569)
+.|+|+++.+ +.+++||++++..+.... -.|+|.|||.+++|+||+++++||.||+|+++|.++++.|||+++.
T Consensus 440 -~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~ 518 (626)
T KOG1175|consen 440 -GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALV 518 (626)
T ss_pred -ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHh
Confidence 7899999984 679999999984444433 2789999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEecCCCCCCceeEEEEEecCCCCC-CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHH
Q 044926 471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS-KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549 (569)
Q Consensus 471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~ 549 (569)
+||.|.|++||+.+++..|+.+++||+++++... +...++|+.++|+.+.++..|+.|.++++||+|.+||+.|+.||+
T Consensus 519 ~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrk 598 (626)
T KOG1175|consen 519 EHPAVAESAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRK 598 (626)
T ss_pred hCcchhheeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHH
Confidence 9999999999999999999999999999998542 234477888999999999999999999999999999999999999
Q ss_pred HHHhc
Q 044926 550 IAENM 554 (569)
Q Consensus 550 ~~~~~ 554 (569)
.....
T Consensus 599 i~~g~ 603 (626)
T KOG1175|consen 599 IASGK 603 (626)
T ss_pred HhccC
Confidence 88776
No 101
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9.6e-63 Score=606.82 Aligned_cols=496 Identities=21% Similarity=0.262 Sum_probs=416.1
Q ss_pred CCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcc
Q 044926 9 ANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAA 88 (569)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 88 (569)
....+.++.++|+++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|
T Consensus 507 ~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG 586 (3956)
T PRK12467 507 TEYAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAG 586 (3956)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 33466789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccc
Q 044926 89 AVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFS 168 (569)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (569)
++++|++|.++.+++.+++++++++++|++.+....+ .... ...++.+.....
T Consensus 587 ~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~-------~~~~-~~~~~~~~~~~~------------------- 639 (3956)
T PRK12467 587 GAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQL-------PVPA-GLRSLCLDEPAD------------------- 639 (3956)
T ss_pred cEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhc-------cccc-CccEEEeccccc-------------------
Confidence 9999999999999999999999999999987433221 1000 112222221110
Q ss_pred hhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH
Q 044926 169 TYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF 248 (569)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~ 248 (569)
..... ....+.....++++++++|||||||.||||.++|+++...+.+....+++..+|+++...|++|..+...
T Consensus 640 ----~~~~~-~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~ 714 (3956)
T PRK12467 640 ----LLCGY-SGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTE 714 (3956)
T ss_pred ----ccccc-CCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHH
Confidence 00000 0011112356789999999999999999999999999999988888899999999999999999999988
Q ss_pred HHHHHHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHH
Q 044926 249 PWAMAAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLR 325 (569)
Q Consensus 249 ~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~ 325 (569)
.+.+++.|+++++.+. .++..+++.|+++++|++.++|+++..+.+..... ... ++|.+++|||++++++.+.
T Consensus 715 ~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~--~~~--~lr~i~~gGe~l~~~~~~~ 790 (3956)
T PRK12467 715 LFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVA--LPR--PQRALVCGGEALQVDLLAR 790 (3956)
T ss_pred HHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhccc--cCC--cccEEEEEeecCCHHHHHH
Confidence 9999999999999864 68999999999999999999999999998754322 223 7799999999999999999
Q ss_pred HHhc--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEE
Q 044926 326 TESL--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVL 403 (569)
Q Consensus 326 ~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v 403 (569)
+.+. +++++|.||+||++..++....... ........+|.|.++. .++|+|+ .+.+++.| +.|||+|
T Consensus 791 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i 859 (3956)
T PRK12467 791 VRALGPGARLINHYGPTETTVGVSTYELSDE-------ERDFGNVPIGQPLANL-GLYILDH-YLNPVPVG--VVGELYI 859 (3956)
T ss_pred HHHhCCCCEEEeCcCCChhhhheeeEecccc-------cccCCCCcccCCcCCC-EEEEECC-CCCCCCCC--CceEEEe
Confidence 8853 6899999999999877665432211 0011135689999998 9999997 67888887 8999999
Q ss_pred ecCcccccccCCccccccccCC-------CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcc
Q 044926 404 RGGCIMLGYLKDPIGTRKCMTD-------DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVN 476 (569)
Q Consensus 404 ~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~ 476 (569)
+|+.+++||+++|+.+..+|.. .+||+|||+|++++||.++++||.|++||++|++|++.+||..|.++|+|.
T Consensus 860 ~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~ 939 (3956)
T PRK12467 860 GGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVR 939 (3956)
T ss_pred cccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcc
Confidence 9999999999999999988842 349999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCCCCCceeEEEEEecCC---CCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHH
Q 044926 477 EAAVVARPDEFWGETPCAFVSLKEG---SKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAE 552 (569)
Q Consensus 477 ~~~v~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~ 552 (569)
+++|++.+.. .+..++++++.... .......++++++++++|+.|++|..++++++||+|++||++|++|++...
T Consensus 940 ~a~v~~~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~ 1017 (3956)
T PRK12467 940 EAVVLAQPGD-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALPKPDA 1017 (3956)
T ss_pred eEEEEEEcCC-CCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcCCccc
Confidence 9999996544 36678888885432 122256789999999999999999999999999999999999999987543
No 102
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-61 Score=507.08 Aligned_cols=488 Identities=28% Similarity=0.385 Sum_probs=400.5
Q ss_pred CeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhc
Q 044926 31 PSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHC 110 (569)
Q Consensus 31 ~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (569)
+++.+.++.+||.||.+.++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++++
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCC
Q 044926 111 QSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEW 190 (569)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (569)
+++.+|+++.......+........ ...++....... ....+++........ .....+
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~----~~~~~~ 140 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPAG--VPLLLVVAGPVP----------------GFRSYEEALAAQPDT----PIADET 140 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhcccc--ccEEEEeCCCCC----------------ccccHHHHHhcCCCC----CCCCCC
Confidence 9999999988776665544333211 233333321110 023344443322111 123456
Q ss_pred CceEEEecCCCCCCCceEEEchHHHHHHH------hhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc
Q 044926 191 DPIVLNYTSGTTMSPKGVVHCHRGIFIVA------VNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK 264 (569)
Q Consensus 191 ~~a~i~~TSGtTG~pk~v~~t~~~l~~~~------~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 264 (569)
+.++++|||||||.||+|.++|.++.... ............+++++..|++|..++...+.++..|+++++.+.
T Consensus 141 ~~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~ 220 (502)
T PRK08276 141 AGADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEK 220 (502)
T ss_pred cceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCC
Confidence 78999999999999999999987754322 112222223567899999999999998888888889999988888
Q ss_pred CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccc
Q 044926 265 FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETG 343 (569)
Q Consensus 265 ~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~ 343 (569)
+++..+++.++++++|++.++|+++..+.+..........+.++|.++++|++++.++++++. .++..+++.||+||++
T Consensus 221 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~ 300 (502)
T PRK08276 221 FDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGG 300 (502)
T ss_pred CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhccccccc
Confidence 999999999999999999999999999988764433333445999999999999999999988 4688899999999998
Q ss_pred cceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcccccccc
Q 044926 344 GIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCM 423 (569)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 423 (569)
++++..... .......+|.|. +. .++|+|+ ++.+++.| +.|||+++|++++.||+++++.+...+
T Consensus 301 ~~~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~ 365 (502)
T PRK08276 301 GVTVITSED----------WLAHPGSVGKAV-LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAAR 365 (502)
T ss_pred ceeEecCcc----------ccccCCCcceec-cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHHHHh
Confidence 765543211 111235678888 66 9999996 67777776 899999999999999999999998888
Q ss_pred CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCC
Q 044926 424 TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSK 503 (569)
Q Consensus 424 ~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 503 (569)
.+++||+|||+|+++++|.+++.||.+++++.+|.++++.+||.++.++|+|.++++++..++..++.++++|+..++..
T Consensus 366 ~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 445 (502)
T PRK08276 366 NPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGAD 445 (502)
T ss_pred cCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCC
Confidence 86799999999999999999999999999999999999999999999999999999999999888899999999876543
Q ss_pred -CCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcC
Q 044926 504 -SKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 504 -~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
.+...+++++.++++++.+++|..++++++||+|++||++|++|++.+....
T Consensus 446 ~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 446 AGDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred CChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhh
Confidence 1123458999999999999999999999999999999999999999976543
No 103
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-61 Score=536.30 Aligned_cols=493 Identities=17% Similarity=0.190 Sum_probs=379.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.+.+|+.++|.++++.+||++|+++.++.+||+||.++++++|++|.+.|+++||+|+|+++|+++++++++||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchh
Q 044926 91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTY 170 (569)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (569)
++|++|. +++.++++.++++++|++.+..+.+.+ . ...+++++....... ..........+
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~----~-----~~~iiv~~~~~~~~~-------~~~~~~~~~~~ 584 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQ----L-----PGRVLVLGGGESRDL-------DLPDDADVIDM 584 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHh----c-----CceEEEecCCccccc-------cCCcchhhhhh
Confidence 9999985 578999999999999998766554322 1 234555432211000 00000000111
Q ss_pred hHhhhcCCCCcc--cCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH
Q 044926 171 ESLVAKGDPEFE--WIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF 248 (569)
Q Consensus 171 ~~~~~~~~~~~~--~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~ 248 (569)
++.......... ...+..++|+++|+|| ||||.||++.++|.++..........+++..+|++++..|++|.+++..
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~ 663 (994)
T PRK07868 585 EKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLV 663 (994)
T ss_pred hhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHH
Confidence 111111000000 0011235799999998 6888888888888776655555556678899999999999999999987
Q ss_pred HHHHHHhCceEEE-eccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH
Q 044926 249 PWAMAAVGGTNIC-IRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE 327 (569)
Q Consensus 249 ~~~~~~~g~~~~~-~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~ 327 (569)
.+..++.|++.++ .+.++++.+++.|+++++|++.++|+++..|++........+. ++|.++ |+.+++.+.+++.
T Consensus 664 ~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~--slr~~~--g~gl~~~l~~~~~ 739 (994)
T PRK07868 664 SLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNH--PVRLFI--GSGMPTGLWERVV 739 (994)
T ss_pred HHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCC--ceEEEe--cCCCCHHHHHHHH
Confidence 6666666666554 4568999999999999999999999999999876433333343 788765 3448999998887
Q ss_pred -hcC-CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEe--CC--------CCC--cccCC
Q 044926 328 -SLG-FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVL--DP--------KSG--VSAKR 393 (569)
Q Consensus 328 -~~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~--d~--------~~~--~~~~~ 393 (569)
.++ +++++.||+||++...... . .....++|.|.++..+++|. |+ ++| ..++.
T Consensus 740 ~~~~~~~l~~~YG~TE~~~~~~~~---~----------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ 806 (994)
T PRK07868 740 EAFAPAHVVEFFATTDGQAVLANV---S----------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEV 806 (994)
T ss_pred HHhCchheeeeeeccccccccccc---C----------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCC
Confidence 454 8899999999986433211 0 11235789999986445543 22 234 33444
Q ss_pred CCCceeEEEEecCcccccccCCcccc--ccccC-CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926 394 DGSTLGEIVLRGGCIMLGYLKDPIGT--RKCMT-DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY 470 (569)
Q Consensus 394 ~~~~~Gel~v~~~~~~~gy~~~~~~~--~~~~~-~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~ 470 (569)
| +.|||+++++.. + +++.+ ...|. .+|||+|||+|++|+||+|+++||.||+||++|.+|+|.+||++|.
T Consensus 807 g--e~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~ 879 (994)
T PRK07868 807 N--EVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALG 879 (994)
T ss_pred C--CceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHh
Confidence 5 899999999753 2 23222 11232 3799999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
+||+|.+++|++.+++. ++.++++|++.++.. .+.++|++++++ ++.|++|+.|+++++||+|++||++|++|++.
T Consensus 880 ~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~--~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 880 RIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAA--ITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAA 955 (994)
T ss_pred cCCCeeEEEEEeecCCC-CceEEEEEEeCCCCc--CCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhc
Confidence 99999999999998875 577889999887654 678999999986 99999999999999999999999999999866
Q ss_pred H
Q 044926 551 A 551 (569)
Q Consensus 551 ~ 551 (569)
.
T Consensus 956 ~ 956 (994)
T PRK07868 956 G 956 (994)
T ss_pred C
Confidence 3
No 104
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-62 Score=486.56 Aligned_cols=522 Identities=22% Similarity=0.254 Sum_probs=415.9
Q ss_pred CCCCCchHHHHHHHHHHcCCCCeEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Q 044926 10 NSTPLTPLVFLERAATVYGDSPSIIYNN--------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELH 81 (569)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~al~~~~--------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~ 81 (569)
...+.|+++.|.+.+..+|+.+++-... +.+||+|..+++..++..|+..|+++++.|+|+..|++||+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 4688999999999999999999996533 68999999999999999999999999999999999999999999
Q ss_pred HHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc-ccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCC
Q 044926 82 FAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF-HSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPN 160 (569)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (569)
.||...|.++||+..+++++.+.+++++++.+++|++. +....+.+..... ....++.++.++...... ....
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~-~~~~LK~iI~~~~~~~~~-----~~~~ 224 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND-SLPSLKAIIQLDEPSDEL-----KEKA 224 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc-cCccceeEEEecCCchhh-----hhhh
Confidence 99999999999999999999999999999999999994 3444433333211 122267788887765322 1122
Q ss_pred CCCCcccchhhHhhhcCCCCcccC-CCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cC---CCCCCCE
Q 044926 161 ISDDQFFSTYESLVAKGDPEFEWI-RPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DW---SVPTQPV 233 (569)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~---~~~~~d~ 233 (569)
...+..+.+|+++++.+....... .+..++|.|.|.|||||||.||||.+||+|+...+..... .. .....|+
T Consensus 225 ~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv 304 (691)
T KOG1256|consen 225 ENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDV 304 (691)
T ss_pred hcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCce
Confidence 334456889999999886554444 4788999999999999999999999999999875543211 11 2234799
Q ss_pred EEEecCchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCC----C----------
Q 044926 234 YLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP----D---------- 299 (569)
Q Consensus 234 ~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~----~---------- 299 (569)
+++.+|+.|++....-...+..|+.+.+.. -|+..+.+.|+..+||++.++|.+|+++-+-... .
T Consensus 305 ~lSyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~ 383 (691)
T KOG1256|consen 305 YLSYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNF 383 (691)
T ss_pred EEEeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 999999999999998888888899888876 4899999999999999999999999987553210 0
Q ss_pred ------------CCCC---C--------------cCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccceeec
Q 044926 300 ------------KKPL---K--------------LAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGIVVSC 349 (569)
Q Consensus 300 ------------~~~~---~--------------~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~~~~~ 349 (569)
+... . ..++|.+++|++++++++...++ .++++|+++||+||+.+.++..
T Consensus 384 A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~ 463 (691)
T KOG1256|consen 384 AMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLT 463 (691)
T ss_pred HHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEec
Confidence 0010 0 26899999999999999999999 5689999999999998444443
Q ss_pred ccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCee
Q 044926 350 AWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWF 429 (569)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 429 (569)
..+ .....++|.|.|++ +++++|..+-..-..+ ..|||+|+|++++.||+++|+.|.+.+++|||+
T Consensus 464 ~~~-----------d~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWL 529 (691)
T KOG1256|consen 464 LPG-----------DNVLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWL 529 (691)
T ss_pred cCC-----------CCCCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccccc
Confidence 211 11457899999999 9999988776666666 579999999999999999999999999999999
Q ss_pred eecceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC----
Q 044926 430 YTGDVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS---- 504 (569)
Q Consensus 430 ~TGD~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---- 504 (569)
+|||+|+++++|.+.+.||.+++|| ..|+.|.|+.||++..+.+.|.+.+|.+.... ..++++|++++....
T Consensus 530 hTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~a~ 606 (691)
T KOG1256|consen 530 HTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSWAA 606 (691)
T ss_pred ccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhhHH
Confidence 9999999999999999999999999 89999999999999999999999999988653 458888888654221
Q ss_pred -CCCH-----------------HHHHHHHh-ccCCCCccccEEEEec---ccC---CCCCCcccHHHHHHHHHhcC
Q 044926 505 -KPTE-----------------KEMIEYCR-GRLPHYMVPKTVVFMD---ELP---KTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 505 -~~~~-----------------~~l~~~l~-~~l~~~~~p~~~~~~~---~iP---~t~~GKi~r~~l~~~~~~~~ 555 (569)
.... +++.+.-+ +.+..+.....+.+.. ++. +||+=|+.|..+.+.|++..
T Consensus 607 ~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~I 682 (691)
T KOG1256|consen 607 KDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQI 682 (691)
T ss_pred HccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHH
Confidence 0011 11111111 2344555566565542 122 67899999999999998764
No 105
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=4.4e-61 Score=548.44 Aligned_cols=499 Identities=22% Similarity=0.256 Sum_probs=400.2
Q ss_pred CCCchHHHHHHHHHHcCC-CCeEEe-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 12 TPLTPLVFLERAATVYGD-SPSIIY-NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~-~~al~~-~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
.+.++.+.|.++++++|+ +.++.+ .++.+||+||.++++++|+.|.+ |+++||+|+++++|+++++++++||+++|+
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 457788999999999975 566665 35799999999999999999976 999999999999999999999999999999
Q ss_pred eEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHH--HHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCccc
Q 044926 90 VLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALV--REAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFF 167 (569)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (569)
++++++|..+.+++.+++++++++++|++++..+.. ......... ...++.+++..... ...
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~-------------~~~ 771 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEF---GIRIIYLEDVRAQI-------------GLA 771 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhcc---CceEEEehHhhccC-------------ChH
Confidence 999999999999999999999999999987654321 111111111 23344433211000 000
Q ss_pred chhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhh
Q 044926 168 STYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWC 247 (569)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~ 247 (569)
..+.+......+... .....++|+++++|||||||.||+|.++|+++..........++++.+|++++.+|++|..++.
T Consensus 772 ~~~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 772 DKIKGLLAGRFPLVY-FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred HHHHHHhhccCCccc-cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHH
Confidence 111222211111111 1124678999999999999999999999999998888888888999999999999999999984
Q ss_pred H-HHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHH
Q 044926 248 F-PWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLR 325 (569)
Q Consensus 248 ~-~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~ 325 (569)
. .+.++..|+++++.+. .+...+.+.++++++|++.++|+++..+.+.. ...++. ++|.+++||+++++++.+.
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~--~lr~v~~gg~~l~~~~~~~ 926 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFR--SLRYVFAGAEKVKEETRQT 926 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--cccccc--ceeEEEEcCCcCCHHHHHH
Confidence 4 6677888999888764 56778899999999999999999999988753 223344 8999999999999999998
Q ss_pred HH-hcCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEe
Q 044926 326 TE-SLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLR 404 (569)
Q Consensus 326 ~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~ 404 (569)
+. .+++++++.||+||++..+..+... .....++|.|.+++ ++++.+.+ + .+ +.|||+++
T Consensus 927 ~~~~~~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~-~----~~--~~Gel~v~ 987 (1140)
T PRK06814 927 WMEKFGIRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVP-G----ID--EGGRLFVR 987 (1140)
T ss_pred HHHHhCCcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecC-C----CC--CceEEEEe
Confidence 87 5799999999999998766543211 11235789999998 89987753 2 12 67999999
Q ss_pred cCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecC
Q 044926 405 GGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARP 484 (569)
Q Consensus 405 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~ 484 (569)
|++++.||+++++........+|||+|||+|++|+||++++.||.||+||.+|++|+|.+||+++.+++++.+++|++.+
T Consensus 988 g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~ 1067 (1140)
T PRK06814 988 GPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIP 1067 (1140)
T ss_pred CCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcc
Confidence 99999999987654332223489999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEecCCCCCCCCHHHHHHHHhcc-CCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCC
Q 044926 485 DEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGR-LPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 485 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
++..|+.+++++. ..+ .+.++++++++++ ++.+++|..++++++||+|++||++|++|+++..+...
T Consensus 1068 ~~~~g~~~~~~~~---~~~--~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 1135 (1140)
T PRK06814 1068 DARKGERIILLTT---ASD--ATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAA 1135 (1140)
T ss_pred cCCCCceEEEEEc---CCC--cCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhc
Confidence 9888887766654 222 5678899999864 99999999999999999999999999999999887654
No 106
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=7.9e-62 Score=604.02 Aligned_cols=495 Identities=17% Similarity=0.201 Sum_probs=415.4
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceE
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVL 91 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (569)
...+++++|.+++.++|+++|+++.+..+||+||+++++++|+.|.+.|+++|++|+|+++++++++++++|++++|+.+
T Consensus 3718 ~~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~ 3797 (4334)
T PRK05691 3718 LEQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGY 3797 (4334)
T ss_pred cccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEE
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhh
Q 044926 92 NTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYE 171 (569)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (569)
||++|+++.+++.+++++++++++|++.................. .+.++...+...
T Consensus 3798 vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------------------- 3854 (4334)
T PRK05691 3798 LPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCAN-RPRLLVWEEVQA---------------------- 3854 (4334)
T ss_pred eCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhccccccc-ccceeeeccccc----------------------
Confidence 999999999999999999999999999876554433332221110 112222111100
Q ss_pred HhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHH
Q 044926 172 SLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWA 251 (569)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~ 251 (569)
.............+++.|+|+|||||||.||||+++|+++.+.+.+....+++++.|+++...++++..++...+.
T Consensus 3855 ----~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~ 3930 (4334)
T PRK05691 3855 ----GEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLA 3930 (4334)
T ss_pred ----ccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHH
Confidence 0000011112246789999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh
Q 044926 252 MAAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES 328 (569)
Q Consensus 252 ~~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~ 328 (569)
+++.|+++++++. .++..+++.++++++|++..+|+++..++... ...+. ++|.+++|||.+++.+.++|.+
T Consensus 3931 ~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~--~lr~~~~gGe~l~~~~~~~~~~ 4005 (4334)
T PRK05691 3931 APLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALD--GLRWMLPTGEAMPPELARQWLQ 4005 (4334)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCC--CceEEEecCCcCCHHHHHHHHH
Confidence 9999999998864 57899999999999999999999999887542 22344 8999999999999999998874
Q ss_pred --cCCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecC
Q 044926 329 --LGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGG 406 (569)
Q Consensus 329 --~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 406 (569)
.+++++|.||+||++..++....... ........+|.|.++. .+.|+|. .+..++.| ..|||+|+|+
T Consensus 4006 ~~~~~~l~n~YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~ 4074 (4334)
T PRK05691 4006 RYPQIGLVNAYGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGT 4074 (4334)
T ss_pred hCCCCeEEeCccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEecc
Confidence 37899999999999876654432211 1111234689999998 9999996 78888888 8999999999
Q ss_pred cccccccCCccccccccC-------CCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeE
Q 044926 407 CIMLGYLKDPIGTRKCMT-------DDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAA 479 (569)
Q Consensus 407 ~~~~gy~~~~~~~~~~~~-------~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~ 479 (569)
.+++||+++|+.+..+|. +++||+|||+|++++||.++++||.|++||++|.+|.+.|||..|.++|+|.+++
T Consensus 4075 ~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~ 4154 (4334)
T PRK05691 4075 GVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAA 4154 (4334)
T ss_pred cccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEE
Confidence 999999999999999884 2469999999999999999999999999999999999999999999999999988
Q ss_pred EEecCCCCCCceeEEEEEecCCCCC-CCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 480 VVARPDEFWGETPCAFVSLKEGSKS-KPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 480 v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
|+.... ..++.++++++....... ....++++.+++++||.|++|..++.+++||+|++||+||++|++.
T Consensus 4155 v~~~~~-~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4155 VAVQEG-VNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred EEEecC-CCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 876644 346788899887654321 1235789999999999999999999999999999999999999764
No 107
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.7e-62 Score=604.65 Aligned_cols=491 Identities=19% Similarity=0.240 Sum_probs=414.8
Q ss_pred CCCCCCCCCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhh
Q 044926 6 PSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVP 85 (569)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~ 85 (569)
.......+.++.++|+++++.+|+++|+.+.++.+||+||.++++++|..|.+.|+++|++|+|+++|+++++++++||+
T Consensus 1123 ~~~~~~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lail 1202 (4334)
T PRK05691 1123 QAPCAPAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAIL 1202 (4334)
T ss_pred CCCCCCccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 33344456789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCc
Q 044926 86 FAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQ 165 (569)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (569)
++|++++|++|.++.+++.+++++++++++|++......+... . ....+.+.....
T Consensus 1203 kaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~----~----~~~~~~~~~~~~---------------- 1258 (4334)
T PRK05691 1203 KAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA----E----GVSAIALDSLHL---------------- 1258 (4334)
T ss_pred HhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc----c----CceEEeeccccc----------------
Confidence 9999999999999999999999999999999987654322110 0 011111111000
Q ss_pred ccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhh
Q 044926 166 FFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g 245 (569)
..+ ....+.....++++++++|||||||.||||.++|+++...+.+....++++++|+++...|++|..+
T Consensus 1259 --~~~--------~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s 1328 (4334)
T PRK05691 1259 --DSW--------PSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVS 1328 (4334)
T ss_pred --ccc--------CCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHH
Confidence 000 0001111245679999999999999999999999999998888888899999999999999999999
Q ss_pred hhHHHHHHHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHH
Q 044926 246 WCFPWAMAAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAV 322 (569)
Q Consensus 246 ~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~ 322 (569)
+...+.+++.|+++++.++ .++..+++.++++++|++.++|+++..+.+... ...+. ++|.+++||+++++.+
T Consensus 1329 ~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~--~lr~~~~gGe~l~~~~ 1404 (4334)
T PRK05691 1329 VWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACT--SLRRLFSGGEALPAEL 1404 (4334)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCC--cccEEEEeecCCCHHH
Confidence 8888999999999999753 689999999999999999999999999986532 22344 8999999999999999
Q ss_pred HHHHH-hc-CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeE
Q 044926 323 LLRTE-SL-GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGE 400 (569)
Q Consensus 323 ~~~~~-~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 400 (569)
.+++. .+ +++++|.||+||++..++...... .......+|.|.++. .++|+|. .+..++.| +.||
T Consensus 1405 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GE 1471 (4334)
T PRK05691 1405 RNRVLQRLPQVQLHNRYGPTETAINVTHWQCQA---------EDGERSPIGRPLGNV-LCRVLDA-ELNLLPPG--VAGE 1471 (4334)
T ss_pred HHHHHHhCCCcEEEeCCCcChheeeeeeeeccc---------ccCCCCcccceeCCC-EEEEECC-CCCCCCCC--CceE
Confidence 99887 44 789999999999976655322110 111234689999998 9999997 67888888 8999
Q ss_pred EEEecCcccccccCCccccccccCC-------CCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCC
Q 044926 401 IVLRGGCIMLGYLKDPIGTRKCMTD-------DGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNP 473 (569)
Q Consensus 401 l~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~ 473 (569)
|+|+|+.+++||+++++.+...|.. .+||+|||+|++++||.++++||.|++||++|++|++.+||.+|.++|
T Consensus 1472 L~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~ 1551 (4334)
T PRK05691 1472 LCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQP 1551 (4334)
T ss_pred EEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCC
Confidence 9999999999999999999988842 359999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926 474 AVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 (569)
Q Consensus 474 ~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~ 550 (569)
+|.+++|++..+.. +..++++++...+.. ...++++++++++|+.|++|..++.+++||+|++||++|++|++.
T Consensus 1552 ~V~~a~v~~~~~~~-~~~lva~~~~~~~~~--~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1552 GVAQAAVLVREGAA-GAQLVGYYTGEAGQE--AEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred CcceEEEEEeeCCC-CCEEEEEEEeCCCCC--CCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 99999999776543 577888888776544 567899999999999999999999999999999999999999764
No 108
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.6e-61 Score=500.79 Aligned_cols=457 Identities=17% Similarity=0.149 Sum_probs=346.2
Q ss_pred cCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc------HHHHHHHHhcCCCCCCCCCEEEE
Q 044926 71 SPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS------RALVREAVSLFPPDLKPPPLVLI 144 (569)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 144 (569)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.+..... ....+++
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~ 75 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA-----PAKAIVL 75 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc-----cceEEEE
Confidence 589999999999999999999999999999999999999999999998642 12222221111 1122222
Q ss_pred eCCCcccccccCCCCCCCCCcccchhhHhhhcCCC------CcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHH
Q 044926 145 SDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDP------EFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIV 218 (569)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~ 218 (569)
....... ..........+.++++.... .........++|+++|+|||||||.||||.+||++++..
T Consensus 76 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~ 147 (499)
T PLN03051 76 PAAGEPV--------AVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRC 147 (499)
T ss_pred eccCccc--------CCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHH
Confidence 2111000 00000001235554421110 000011134689999999999999999999999998776
Q ss_pred HhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeechhHHHHHHHcCCC
Q 044926 219 AVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRD 297 (569)
Q Consensus 219 ~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~ 297 (569)
+......+++..+|++++..|++|..++...+.+++.|+++++.+. +++..+++.|+++++|++.++|+++..|++...
T Consensus 148 ~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~ 227 (499)
T PLN03051 148 ASDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGA 227 (499)
T ss_pred HHHHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCc
Confidence 6555566788899999999999999998777788899999988864 788999999999999999999999999987542
Q ss_pred --CCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-c--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCc
Q 044926 298 --PDKKPLKLAKPVHLVTAGAPPPAAVLLRTES-L--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGV 372 (569)
Q Consensus 298 --~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~-~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 372 (569)
....+++ ++|.+++||++++++..+++++ . ++.+++.||+||+++.+...... ......++|.
T Consensus 228 ~~~~~~~~~--~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~ 295 (499)
T PLN03051 228 FAMEGLDWS--KLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL----------QPQAPGAFST 295 (499)
T ss_pred cccccCCch--hheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc----------CCCCCccccC
Confidence 2223344 9999999999999999887765 3 47899999999986543321100 0112357899
Q ss_pred ccccceeeEEeCCCCCcccCCCCCceeEEEEecCcc--cccccCCccccccccCC--------CCeeeecceEEEecCCc
Q 044926 373 KTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCI--MLGYLKDPIGTRKCMTD--------DGWFYTGDVGVMHSDGY 442 (569)
Q Consensus 373 ~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~--------~~~~~TGD~~~~~~dg~ 442 (569)
|.++. +++|+|+ +|.+++.|+++.|||+++||.+ +.||++++. +...+.+ .+||+|||+|++|+||+
T Consensus 296 p~~~~-~~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~ 372 (499)
T PLN03051 296 ASLGT-RFVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGY 372 (499)
T ss_pred CCCCc-eEEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCc
Confidence 99998 9999996 6777877644589999999976 589998653 3222211 12799999999999999
Q ss_pred EEEeccCCCeEEeCceeeeHHHHHHHHHc-CCCcceeEEEecCCCCCC-ceeEEEE---EecCCCCCCCCHHHHHHHH--
Q 044926 443 LEIKDRSKDVIISGGENLSSVEVESVLYS-NPAVNEAAVVARPDEFWG-ETPCAFV---SLKEGSKSKPTEKEMIEYC-- 515 (569)
Q Consensus 443 l~~~GR~~~~i~~~G~~v~~~~iE~~l~~-~~~i~~~~v~~~~~~~~~-~~~~~~v---~~~~~~~~~~~~~~l~~~l-- 515 (569)
+++.||.+|+||++|++|+|.|||++|.+ ||+|.+++|++.+++.+| +.++++| +++++.. ....++++++|
T Consensus 373 l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~-~~~~~~l~~~~~~ 451 (499)
T PLN03051 373 FCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFD-QARPEALQKKFQE 451 (499)
T ss_pred EEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceeccccc-ccchHHHHHHHHH
Confidence 99999999999999999999999999996 999999999999999888 5788888 6665531 14556676665
Q ss_pred --hccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCC
Q 044926 516 --RGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 516 --~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
+++|+.+..|..++++++||+|++||++|++|++.+.+...
T Consensus 452 ~l~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~ 494 (499)
T PLN03051 452 AIQTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKELS 494 (499)
T ss_pred HHHhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhhc
Confidence 45677766667799999999999999999999998877765
No 109
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-61 Score=516.01 Aligned_cols=501 Identities=19% Similarity=0.190 Sum_probs=376.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
..+.|+.++|+++++.+||++|+++.+ +.+||+||.++++++|.+|.+.|+++||+|+++++|+++|+++++||
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 125 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAA 125 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 457789999999999999999998743 68999999999999999999999999999999999999999999999
Q ss_pred hhccceEeeccCCCCH-----HHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 85 PFAAAVLNTINTRLDA-----RTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 85 ~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
+++|++++|++|.++. +++.++++.++++++|++.... +.......... ...++.+......
T Consensus 126 ~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~~--~~~~i~~~~~~~~--------- 192 (624)
T PRK12582 126 MQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP--FARALAALDLL--DVTVVHVTGPGEG--------- 192 (624)
T ss_pred HHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH--HHHHHHhhhhc--CceEEEEcCCCcc---------
Confidence 9999999999999874 8999999999999999986421 11111111110 1223333221100
Q ss_pred CCCCCcccchhhHhhhcCCCCc--ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCC---CCEE
Q 044926 160 NISDDQFFSTYESLVAKGDPEF--EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPT---QPVY 234 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~---~d~~ 234 (569)
.....+.++........ .......++++++|+|||||||.||||.+||+++..+.......+.... .+++
T Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~ 267 (624)
T PRK12582 193 -----IASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVS 267 (624)
T ss_pred -----cccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceE
Confidence 00133444443222110 0111245689999999999999999999999999877665544444433 5799
Q ss_pred EEecCchhhhhhhHH-HHHHHhCceEEEecc-CCH---HHHHHHHHHhCcceeechhHHHHHHHcCCCCCCC--CCCcCC
Q 044926 235 LWTLPMFHSNGWCFP-WAMAAVGGTNICIRK-FDA---SIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKK--PLKLAK 307 (569)
Q Consensus 235 ~~~~pl~~~~g~~~~-~~~~~~g~~~~~~~~-~~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~--~~~~~~ 307 (569)
+..+|++|.+|+... +..+..|+++++.+. +++ ..+++.++++++|++.++|.++..|++....... ...+++
T Consensus 268 l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~s 347 (624)
T PRK12582 268 LDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKN 347 (624)
T ss_pred EEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhh
Confidence 999999999998664 456677888877642 333 4567778899999999999999988764322211 111338
Q ss_pred CceEEEeCCCCcHHHHHHHHhc-------CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceee
Q 044926 308 PVHLVTAGAPPPAAVLLRTESL-------GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEV 380 (569)
Q Consensus 308 l~~~~~~g~~l~~~~~~~~~~~-------~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 380 (569)
+|.+++||+++++++.+++.+. ++++++.||+||++.++...... .....++|.|.+++ ++
T Consensus 348 lr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v 415 (624)
T PRK12582 348 LRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPGV-EL 415 (624)
T ss_pred eeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCCc-EE
Confidence 9999999999999999998753 36899999999997665422110 12245789999998 89
Q ss_pred EEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEE-e---cCCcEEEeccCCCeEE-e
Q 044926 381 DVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVM-H---SDGYLEIKDRSKDVII-S 455 (569)
Q Consensus 381 ~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~-~---~dg~l~~~GR~~~~i~-~ 455 (569)
+|++. | +.|||+++|++++.||+++++.+...|..+|||+|||+|++ + ++|++++.||.+|+|+ .
T Consensus 416 ~i~~~--------G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~ 485 (624)
T PRK12582 416 KLAPV--------G--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLS 485 (624)
T ss_pred EEccC--------C--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecC
Confidence 88642 3 68999999999999999999999988977999999999998 4 4699999999999999 6
Q ss_pred CceeeeHHHHH--HHHHcCCCcceeEEEecCCCCCCceeEEEEEecC--------CCCC----CCCHHHHHHHHhccC--
Q 044926 456 GGENLSSVEVE--SVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKE--------GSKS----KPTEKEMIEYCRGRL-- 519 (569)
Q Consensus 456 ~G~~v~~~~iE--~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~--------~~~~----~~~~~~l~~~l~~~l-- 519 (569)
+|++|++.+|| .++.+||.|.+++|++.+++..| ++|++.. .... ....+++++++++++
T Consensus 486 ~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 561 (624)
T PRK12582 486 TGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSA 561 (624)
T ss_pred CCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHH
Confidence 89999999885 68889999999999999876544 3333211 1000 012345666655544
Q ss_pred -----CCCc-cccEEEEecccCC------CCCCcccHHHHHHHHHhcC
Q 044926 520 -----PHYM-VPKTVVFMDELPK------TSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 520 -----~~~~-~p~~~~~~~~iP~------t~~GKi~r~~l~~~~~~~~ 555 (569)
+.+. .|..+.+++++|+ |++||+.|+.+.+.|++.-
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i 609 (624)
T PRK12582 562 HNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALV 609 (624)
T ss_pred HHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHH
Confidence 4444 9999999988774 4678889999988887654
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-60 Score=504.54 Aligned_cols=505 Identities=21% Similarity=0.290 Sum_probs=375.3
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHh
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNN---------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAV 84 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~---------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~ 84 (569)
|++.++|++++..+|+++|+++.+ +.+||+||.++++++|..|.+.| .+||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 578999999999999999998642 68999999999999999999999 68999999999999999999999
Q ss_pred hhccceEeeccC---CCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCC
Q 044926 85 PFAAAVLNTINT---RLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNI 161 (569)
Q Consensus 85 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (569)
+++|++++|+++ ..+.+++.++++.+++++++++++..+.+.+........ ....++.++....
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------ 146 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQ-SAPPVIEVDLLDL------------ 146 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccc-cccceEeeccccc------------
Confidence 999999999997 457899999999999999999987766554432211100 0122222211000
Q ss_pred CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC-C-----CCCCCEEE
Q 044926 162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW-S-----VPTQPVYL 235 (569)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~-~-----~~~~d~~~ 235 (569)
..... .......++++++++|||||||.||+|.++|++++.++......+ . ...+++++
T Consensus 147 ------------~~~~~---~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (578)
T PRK05850 147 ------------DSPRG---SDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVV 211 (578)
T ss_pred ------------ccCCc---cccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEE
Confidence 00000 001123567999999999999999999999999987765544322 2 35678999
Q ss_pred EecCchhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHH-HHHHHcCCCC-CCCCCCcCCC
Q 044926 236 WTLPMFHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVV-LNMLSNYRDP-DKKPLKLAKP 308 (569)
Q Consensus 236 ~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~-l~~l~~~~~~-~~~~~~~~~l 308 (569)
+.+|++|..|+.. .+.+++.|+++++.++ .++..+++.+++++++.. .+|.+ +..+...... ......+.++
T Consensus 212 ~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~l 290 (578)
T PRK05850 212 SWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGV 290 (578)
T ss_pred EECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhh
Confidence 9999999999865 6777888998888764 278999999999999865 45554 4434332211 1112223489
Q ss_pred ceEEEeCCCCcHHHHHHHH-hc---C---Ceeeecccccccccceeecccccccc--cCcHHHH------------hhhh
Q 044926 309 VHLVTAGAPPPAAVLLRTE-SL---G---FKVSHGYGLTETGGIVVSCAWKRNWN--LLPAAEK------------AKLK 367 (569)
Q Consensus 309 ~~~~~~g~~l~~~~~~~~~-~~---~---~~i~~~YG~tE~~~~~~~~~~~~~~~--~~~~~~~------------~~~~ 367 (569)
|.+++||+++++.+.+++. .+ + ..+++.||+||++..+.......... ....... ....
T Consensus 291 r~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 370 (578)
T PRK05850 291 LGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPL 370 (578)
T ss_pred eeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceE
Confidence 9999999999999998876 33 2 36899999999875444321110000 0000000 0001
Q ss_pred cccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccC-----------CCCeeeecceEE
Q 044926 368 ARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMT-----------DDGWFYTGDVGV 436 (569)
Q Consensus 368 ~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------~~~~~~TGD~~~ 436 (569)
...|.|. +. +++|+|++++..++.| +.|||+++|++++.||+++++.+...|. .++||+|||+|+
T Consensus 371 ~~~g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~ 446 (578)
T PRK05850 371 VSYGSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGF 446 (578)
T ss_pred EeccCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceee
Confidence 1233332 34 8999998788888887 8999999999999999999999887773 257999999999
Q ss_pred EecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCC----CHHHHH
Q 044926 437 MHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKP----TEKEMI 512 (569)
Q Consensus 437 ~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~~l~ 512 (569)
++ ||++++.||.+|+|+++|++|+|.+||.+|.+++.+ +++|++++++ .++.++++|++.++..... ....++
T Consensus 447 ~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~ 523 (578)
T PRK05850 447 IS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVK 523 (578)
T ss_pred EE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHH
Confidence 98 999999999999999999999999999999999985 5778888776 6788999998876543111 124556
Q ss_pred HHHhccCCC--CccccEEEEec--ccCCCCCCcccHHHHHHHHHhcC
Q 044926 513 EYCRGRLPH--YMVPKTVVFMD--ELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 513 ~~l~~~l~~--~~~p~~~~~~~--~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+.+...+.. ...|..+++++ +||+|++||++|++|+++|.+..
T Consensus 524 ~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~ 570 (578)
T PRK05850 524 REVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDE 570 (578)
T ss_pred HHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCC
Confidence 665554432 23566666664 89999999999999999998764
No 111
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-60 Score=502.90 Aligned_cols=504 Identities=21% Similarity=0.246 Sum_probs=391.1
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCC---eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccc
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNN---ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAA 89 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~---~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 89 (569)
-.|+.++|+..++.+|+..++...+ +.+||+||..++.++|.+|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 99 (579)
T PRK09192 20 FPTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGL 99 (579)
T ss_pred hhhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCC
Confidence 3589999999999988776654332 6799999999999999999999999999999999999999999999999999
Q ss_pred eEeeccCCCC-------HHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCC
Q 044926 90 VLNTINTRLD-------ARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNIS 162 (569)
Q Consensus 90 ~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (569)
+++|+++..+ .+++.++++.++++++|+++...+.+.+..... ..+....
T Consensus 100 ~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~------~~~~~~~----------------- 156 (579)
T PRK09192 100 VPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN------PLLHVLS----------------- 156 (579)
T ss_pred eeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc------cccceee-----------------
Confidence 9999987543 588999999999999999987766555432111 1111111
Q ss_pred CCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc-cCCCCCCCEEEEecCch
Q 044926 163 DDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS-DWSVPTQPVYLWTLPMF 241 (569)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~-~~~~~~~d~~~~~~pl~ 241 (569)
+.++....... .......++++++++|||||||.||+|.++|++++..+..... .+++..+|+++...|++
T Consensus 157 -------~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 228 (579)
T PRK09192 157 -------HAWFKALPEAD-VALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFY 228 (579)
T ss_pred -------hhhhcccCCCc-cccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCC
Confidence 11111111000 0111245678999999999999999999999999988877776 78899999999999999
Q ss_pred hhhhhhHH-HHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCC-CCCCCcCCCceEEEeC
Q 044926 242 HSNGWCFP-WAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPD-KKPLKLAKPVHLVTAG 315 (569)
Q Consensus 242 ~~~g~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-~~~~~~~~l~~~~~~g 315 (569)
|.+++... +..+..|+++++.+. .++..+++.+.++++++++..|..+..+....... .....+.++|.+++||
T Consensus 229 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG 308 (579)
T PRK09192 229 HDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGA 308 (579)
T ss_pred CcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecC
Confidence 99998764 445677777766642 36889999999999998877665555554332111 1223344899999999
Q ss_pred CCCcHHHHHHHHh-c---C---Ceeeecccccccccceeeccccccccc--CcHH-------------H--HhhhhcccC
Q 044926 316 APPPAAVLLRTES-L---G---FKVSHGYGLTETGGIVVSCAWKRNWNL--LPAA-------------E--KAKLKARQG 371 (569)
Q Consensus 316 ~~l~~~~~~~~~~-~---~---~~i~~~YG~tE~~~~~~~~~~~~~~~~--~~~~-------------~--~~~~~~~~g 371 (569)
+++++.+.+.+.+ + + ..+++.||+||+++.+........... .... . ......++|
T Consensus 309 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG 388 (579)
T PRK09192 309 DMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCG 388 (579)
T ss_pred ccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecC
Confidence 9999999988874 3 2 348999999999766554322111000 0000 0 001124689
Q ss_pred cccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCC
Q 044926 372 VKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKD 451 (569)
Q Consensus 372 ~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~ 451 (569)
.+.++. +++|+|+ ++..++.+ +.|||+++|+.++.||+++ ..+...+..++||+|||+|++ ++|++++.||.+|
T Consensus 389 ~~~p~~-~v~i~d~-~~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd 462 (579)
T PRK09192 389 KALPGH-EIEIRNE-AGMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKD 462 (579)
T ss_pred CcCCCc-EEEEECC-CCCCCCCC--CEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEecccc
Confidence 999998 9999996 57777776 8999999999999999999 556666666899999999999 8999999999999
Q ss_pred eEEeCceeeeHHHHHHHHHcCCCcc--eeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCC-CCccccEE
Q 044926 452 VIISGGENLSSVEVESVLYSNPAVN--EAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLP-HYMVPKTV 528 (569)
Q Consensus 452 ~i~~~G~~v~~~~iE~~l~~~~~i~--~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~ 528 (569)
+|+++|++|+|.+||++|.++|+|. ++++++.+++. +..++++++..++.. .+.+++++++++.+. .++.|..+
T Consensus 463 ~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~--~~~~~l~~~~~~~l~~~~~~~~~i 539 (579)
T PRK09192 463 LIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDE--ERRGQLIHALAALVRSEFGVEAAV 539 (579)
T ss_pred EEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCCh--HHHHHHHHHHHHHHHHHhCCCceE
Confidence 9999999999999999999999998 89999988875 457777777665433 567889999998874 67888888
Q ss_pred EEec--ccCCCCCCcccHHHHHHHHHhcCC
Q 044926 529 VFMD--ELPKTSTGKIQKFVLREIAENMGS 556 (569)
Q Consensus 529 ~~~~--~iP~t~~GKi~r~~l~~~~~~~~~ 556 (569)
+++. +||+|.+||++|++|++++.+...
T Consensus 540 ~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~ 569 (579)
T PRK09192 540 ELVPPHSLPRTSSGKLSRAKAKKRYLSGAF 569 (579)
T ss_pred EEeCCCCcCCCCCcchhHHHHHHHHHcCCC
Confidence 8875 899999999999999999888664
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3.3e-60 Score=487.39 Aligned_cols=436 Identities=28% Similarity=0.453 Sum_probs=367.0
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccc
Q 044926 41 TWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFH 120 (569)
Q Consensus 41 Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (569)
||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.+++++++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCC
Q 044926 121 SRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSG 200 (569)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 200 (569)
..... +.. ..+..+................+++++++||||
T Consensus 81 ~~~~~----------------~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 121 (436)
T TIGR01923 81 LEEKD----------------FQA-----------------------DSLDRIEAAGRYETSLSASFNMDQIATLMFTSG 121 (436)
T ss_pred ccccc----------------eee-----------------------cchHhhhhcccccccccccCCcCceEEEEeCCC
Confidence 32100 000 000000000000001112245678999999999
Q ss_pred CCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcc
Q 044926 201 TTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVT 280 (569)
Q Consensus 201 tTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t 280 (569)
|||.||+|.++|+++...+......+++.++|++++..|++|.+++...+.++..|+++++.+.++ .+++.++++++|
T Consensus 122 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t 199 (436)
T TIGR01923 122 TTGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVT 199 (436)
T ss_pred CCCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCe
Confidence 999999999999999998888888889999999999999999999988888899999988886553 899999999999
Q ss_pred eeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCeeeecccccccccceeecccccccccCcH
Q 044926 281 HMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPA 360 (569)
Q Consensus 281 ~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~ 360 (569)
++.++|+++..+++..... . ++|.++++|+++++.+.+.+.+.++++++.||+||++..+.......
T Consensus 200 ~~~~~P~~l~~l~~~~~~~----~--~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~------- 266 (436)
T TIGR01923 200 HISLVPTQLNRLLDEGGHN----E--NLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEM------- 266 (436)
T ss_pred EEEeHHHHHHHHHhCcCCC----C--ceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccc-------
Confidence 9999999999999865322 3 89999999999999999988878999999999999987655432111
Q ss_pred HHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecC
Q 044926 361 AEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSD 440 (569)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~d 440 (569)
......+|.+.+++ ++++.+...+ +.|||+++|+.++.||++++..+...+. ++||+|||++++++|
T Consensus 267 ---~~~~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~d 333 (436)
T TIGR01923 267 ---LHARPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQ-QGWFNTGDIGELDGE 333 (436)
T ss_pred ---cccccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhc-CCCeeccceEEEcCC
Confidence 11122478888887 8888432222 5699999999999999998777665554 799999999999999
Q ss_pred CcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCC
Q 044926 441 GYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLP 520 (569)
Q Consensus 441 g~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~ 520 (569)
|.+++.||.+|+||++|+++++.+||++|.+++.|.+++|++.++...+..+.++++..++ .+.+++.++++++++
T Consensus 334 g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~----~~~~~l~~~l~~~l~ 409 (436)
T TIGR01923 334 GFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD----ISQAKLIAYLTEKLA 409 (436)
T ss_pred CCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC----CCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999887777778888887653 567899999999999
Q ss_pred CCccccEEEEecccCCCCCCcccHHHH
Q 044926 521 HYMVPKTVVFMDELPKTSTGKIQKFVL 547 (569)
Q Consensus 521 ~~~~p~~~~~~~~iP~t~~GKi~r~~l 547 (569)
.+++|..++++++||+|++||++|++|
T Consensus 410 ~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 410 KYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCCCCeEEEEecCCCCCCCCceecccC
Confidence 999999999999999999999999875
No 113
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-59 Score=444.24 Aligned_cols=524 Identities=21% Similarity=0.255 Sum_probs=417.0
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEeCC-----------------------eeeeHHHHHHHHHHHHHHHHHcCCCCCCE-E
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIYNN-----------------------ITYTWSDTHHRCLQLASSLLSIGISRGHV-V 67 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~~~-----------------------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~-V 67 (569)
.-.|+.+++++.++.+.++.++-..+ ..+||.|+.+++.++|++|.+.|++++++ |
T Consensus 39 g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~ 118 (678)
T KOG1180|consen 39 GASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKI 118 (678)
T ss_pred CcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 34689999999999999999985421 57999999999999999999999997776 9
Q ss_pred EEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCC
Q 044926 68 SVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDD 147 (569)
Q Consensus 68 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (569)
+|+++.+.+|+.+++||++-+..+|.+..++..+.+.|-|++++++++|++.++.+.+...++.... .+.++..+..
T Consensus 119 ~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~---vk~II~~d~i 195 (678)
T KOG1180|consen 119 AIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKT---VKHIIYFDPI 195 (678)
T ss_pred EEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCc---eeEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999988876666555443 5677777743
Q ss_pred CcccccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC-
Q 044926 148 DDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW- 226 (569)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~- 226 (569)
+-.. ......+....+..+.+|++++..+.....+..+..++|+|.|+|||||||.||||+++|+|+++....+....
T Consensus 196 d~~~-~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~ 274 (678)
T KOG1180|consen 196 DYDA-AKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVP 274 (678)
T ss_pred CCcc-chhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCc
Confidence 3111 01111111224456789999999887775444455789999999999999999999999999999888877765
Q ss_pred CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccCCH--------HHHHHHHHHhCcceeechhHHHHHHHcCCCC
Q 044926 227 SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDA--------SIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP 298 (569)
Q Consensus 227 ~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~ 298 (569)
.+++.|+++..+|+.|+..+.+-+.++.-|+.+-.-++.+. ...-..+..++||++.++|..|+++.+-...
T Consensus 275 ~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~ 354 (678)
T KOG1180|consen 275 ELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLS 354 (678)
T ss_pred ccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHH
Confidence 68999999999999999999999999999998866543221 1122345678999999999999987553210
Q ss_pred C--------------------------C--------------CCCCcCCCceEEEeCCCCcHHHHHHHHh-cCCeeeecc
Q 044926 299 D--------------------------K--------------KPLKLAKPVHLVTAGAPPPAAVLLRTES-LGFKVSHGY 337 (569)
Q Consensus 299 ~--------------------------~--------------~~~~~~~l~~~~~~g~~l~~~~~~~~~~-~~~~i~~~Y 337 (569)
+ . +.+-.+++|.+++||++++++..+.+.- +.+++.++|
T Consensus 355 kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGY 434 (678)
T KOG1180|consen 355 KVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGY 434 (678)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccc
Confidence 0 0 0111379999999999999999998884 577999999
Q ss_pred cccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcc
Q 044926 338 GLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPI 417 (569)
Q Consensus 338 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~ 417 (569)
|.||+++..+.... .+ -....+|.|++.. +++++|-+++-..+.+..-.||||++|+++..||+++++
T Consensus 435 GLTEtca~~tv~e~---------~d--~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~e 502 (678)
T KOG1180|consen 435 GLTETCAAATVLEP---------ED--FSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEE 502 (678)
T ss_pred cccchhcccEecCh---------hh--cccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChh
Confidence 99999776665321 11 1234788888888 999999887766665533479999999999999999999
Q ss_pred ccccccCC-CC--eeeecceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeE
Q 044926 418 GTRKCMTD-DG--WFYTGDVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPC 493 (569)
Q Consensus 418 ~~~~~~~~-~~--~~~TGD~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~ 493 (569)
.+...|.. +| ||+|||+|++++||.|.+..|.+|++| -+|+.|+++.+|.+++..|.|...+|.+.... ..++
T Consensus 503 kT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~---s~~V 579 (678)
T KOG1180|consen 503 KTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK---SKPV 579 (678)
T ss_pred hhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc---ceeE
Confidence 99999987 88 999999999999999999999999999 89999999999999999999999999887664 4578
Q ss_pred EEEEecCCCCC------CCCH-----------------HHHHHHH-hccCCCCccccEEEEecc-c-C----CCCCCccc
Q 044926 494 AFVSLKEGSKS------KPTE-----------------KEMIEYC-RGRLPHYMVPKTVVFMDE-L-P----KTSTGKIQ 543 (569)
Q Consensus 494 ~~v~~~~~~~~------~~~~-----------------~~l~~~l-~~~l~~~~~p~~~~~~~~-i-P----~t~~GKi~ 543 (569)
++|++..+.-. .... ++|.++- ..+|..+.+|..|++.++ + | .|..-|+.
T Consensus 580 aiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLK 659 (678)
T KOG1180|consen 580 AIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKLK 659 (678)
T ss_pred EEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHhh
Confidence 88887653210 0111 1222222 346888999999988754 1 3 34567899
Q ss_pred HHHHHHHHHhc
Q 044926 544 KFVLREIAENM 554 (569)
Q Consensus 544 r~~l~~~~~~~ 554 (569)
|+.++..|++-
T Consensus 660 Rk~I~~~~k~e 670 (678)
T KOG1180|consen 660 RKEILAAYKKE 670 (678)
T ss_pred HHHHHHHHHHH
Confidence 99999888764
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7e-58 Score=482.87 Aligned_cols=495 Identities=20% Similarity=0.202 Sum_probs=378.0
Q ss_pred chHHHHHHHHHHcCCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 15 TPLVFLERAATVYGDSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
++.+.|...|..+|+.+++...+ +.+||.||+++++++|.+|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 47888889999999999997655 6899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCHHHH-------HHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCc
Q 044926 93 TINTRLDARTV-------SLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQ 165 (569)
Q Consensus 93 ~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (569)
++++..+.+++ .++++.++++.+++++........... . ...
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~-----~~~------------------------- 131 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE-K-----GIR------------------------- 131 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc-c-----CCc-------------------------
Confidence 99998775543 556788899999998765433221110 0 000
Q ss_pred ccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCC-CEEEEecCchhhh
Q 044926 166 FFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQ-PVYLWTLPMFHSN 244 (569)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~-d~~~~~~pl~~~~ 244 (569)
...++++...... ......++++++++|||||||.||+|.++|+++...+......+++..+ |++++.+|++|..
T Consensus 132 -~~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 207 (545)
T PRK07768 132 -VLTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDM 207 (545)
T ss_pred -eeehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccch
Confidence 1222232221111 1123456899999999999999999999999999888877777888776 8999999999999
Q ss_pred hhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCC----CCCCCCCcCCCceEEEeC
Q 044926 245 GWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRD----PDKKPLKLAKPVHLVTAG 315 (569)
Q Consensus 245 g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~----~~~~~~~~~~l~~~~~~g 315 (569)
++.. ...++..|+++++.++ .++..+++.+++++++++.+.|..+..+.+... ....++ .++|.++++|
T Consensus 208 g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~lr~~~~~g 285 (545)
T PRK07768 208 GMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDL--SSLRFALNGA 285 (545)
T ss_pred HHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCc--hheeeEEecc
Confidence 9875 4456788888887754 367889999999999999888877766654321 112334 4999999999
Q ss_pred CCCcHHHHHHHHh----cCC---eeeecccccccccceeeccccccccc-C-cHHH-------------HhhhhcccCcc
Q 044926 316 APPPAAVLLRTES----LGF---KVSHGYGLTETGGIVVSCAWKRNWNL-L-PAAE-------------KAKLKARQGVK 373 (569)
Q Consensus 316 ~~l~~~~~~~~~~----~~~---~i~~~YG~tE~~~~~~~~~~~~~~~~-~-~~~~-------------~~~~~~~~g~~ 373 (569)
+++++...+++.+ ++. .+++.||+||++..+........... . .... ......++|.|
T Consensus 286 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 365 (545)
T PRK07768 286 EPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPP 365 (545)
T ss_pred CCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCC
Confidence 9999999988864 444 49999999999876544322111100 0 0000 01123578999
Q ss_pred cccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeE
Q 044926 374 TTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVI 453 (569)
Q Consensus 374 ~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i 453 (569)
.++. .++|+|+ ++..++.+ +.|||+++|+.++.||++.+..... +..++||+|||+|++++||.++++||.+|+|
T Consensus 366 ~~g~-~~~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i 440 (545)
T PRK07768 366 LPGL-EVRVVDE-DGQVLPPR--GVGVIELRGESVTPGYLTMDGFIPA-QDADGWLDTGDLGYLTEEGEVVVCGRVKDVI 440 (545)
T ss_pred CCCC-EEEEECC-CCCCCCCC--CEEEEEEccCcccccccCCCCCccc-ccCCCeeeccceEEEecCCEEEEEccccceE
Confidence 9998 9999995 67778777 8999999999999999986544333 3347899999999999999999999999999
Q ss_pred EeCceeeeHHHHHHHHHcCCCcceeEEEecC--CCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCC--ccccEEE
Q 044926 454 ISGGENLSSVEVESVLYSNPAVNEAAVVARP--DEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHY--MVPKTVV 529 (569)
Q Consensus 454 ~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~ 529 (569)
+.+|++|++.+||..|.++|+|.+++|++.. +...++..+++++...... +....++.+.+++.+..+ ..|..+.
T Consensus 441 ~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~p~~v~ 519 (545)
T PRK07768 441 IMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFED-PAEVRRIRHQVAHEVVAEVGVRPRNVV 519 (545)
T ss_pred EECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEeccccc-HHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 9999999999999999999999998777654 3333445555554433221 123345777777766443 5788888
Q ss_pred Eec--ccCCCCCCcccHHHHHHHHH
Q 044926 530 FMD--ELPKTSTGKIQKFVLREIAE 552 (569)
Q Consensus 530 ~~~--~iP~t~~GKi~r~~l~~~~~ 552 (569)
+++ +||+|++||++|++|+++|.
T Consensus 520 ~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 520 VLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred EeCCCcCCCCCchhHHHHHHHHhcC
Confidence 886 89999999999999999874
No 115
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-57 Score=463.56 Aligned_cols=407 Identities=22% Similarity=0.257 Sum_probs=352.4
Q ss_pred eEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcC
Q 044926 32 SIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQ 111 (569)
Q Consensus 32 al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (569)
++++.++.+||.||.++++++|..|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..++++++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46788899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCC
Q 044926 112 SKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWD 191 (569)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (569)
++.+++++.... .... ....+++
T Consensus 80 ~~~~i~~~~~~~--------------------~~~~-------------------------------------~~~~~~~ 102 (414)
T PRK08308 80 CHGLLYGESDFT--------------------KLEA-------------------------------------VNYLAEE 102 (414)
T ss_pred CCEEEecCcccc--------------------cccC-------------------------------------CCCCCCC
Confidence 999999753100 0000 0134568
Q ss_pred ceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEeccCCHHHH
Q 044926 192 PIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIRKFDASII 270 (569)
Q Consensus 192 ~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~ 270 (569)
+++++|||||||.||+|.++|+++..........+.+..+|+++...|++|.+|+.. .+.++..|+++++.+.+++..+
T Consensus 103 ~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 182 (414)
T PRK08308 103 PSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFA 182 (414)
T ss_pred ceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHH
Confidence 999999999999999999999999988888777888889999999999999999854 6777889999999888999999
Q ss_pred HHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCeeeecccccccccceeecc
Q 044926 271 FDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCA 350 (569)
Q Consensus 271 ~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~ 350 (569)
++.++++++|++.++|.++..+.+..... . +++.++.+|+.+++.+.+++++.+.++++.||+||++.+.....
T Consensus 183 ~~~l~~~~~t~~~~~P~~~~~l~~~~~~~----~--~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 256 (414)
T PRK08308 183 LNILRNTPQHILYAVPLMLHILGRLLPGT----F--QFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD 256 (414)
T ss_pred HHHHHHhCCeEEEcCHHHHHHHHhcCCcc----c--cccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC
Confidence 99999999999999999999998764321 2 67889999999999999999876789999999999975433211
Q ss_pred cccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeee
Q 044926 351 WKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFY 430 (569)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 430 (569)
......+|.|.+++ ++++.+.+ + +.||+++++. ++||+
T Consensus 257 -------------~~~~~~~G~p~~~~-~~~~~~~~-------~--~~gel~v~~~-------------------~~~~~ 294 (414)
T PRK08308 257 -------------MKSHLDLGNPLPHV-SVSAGSDE-------N--APEEIVVKMG-------------------DKEIF 294 (414)
T ss_pred -------------CCCCCccCccCCCe-EEEEecCC-------C--CCceEEEEcC-------------------CceEE
Confidence 01234689999988 88886531 2 5799999751 67999
Q ss_pred ecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHH
Q 044926 431 TGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKE 510 (569)
Q Consensus 431 TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 510 (569)
|||+|++++||++++.||.+|+||.+|++|+|.+||+++.++++|.+++|++.+++..++.++++++..+. .+.++
T Consensus 295 TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~----~~~~~ 370 (414)
T PRK08308 295 TKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEE----IDPVQ 370 (414)
T ss_pred CCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC----CCHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888888876542 57789
Q ss_pred HHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHH
Q 044926 511 MIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLR 548 (569)
Q Consensus 511 l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~ 548 (569)
++++++++++.+++|..++++++||+|++||++|+.|+
T Consensus 371 l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 371 LREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 99999999999999999999999999999999999543
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=9.1e-57 Score=428.56 Aligned_cols=521 Identities=22% Similarity=0.224 Sum_probs=413.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhcc
Q 044926 11 STPLTPLVFLERAATVYGDSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAA 88 (569)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G 88 (569)
....|+.++|.++|+++|+++|+++.+ +++||+|+++.++++|+.|..+|++.||.||++|+|.++++.+.+|++++|
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlG 153 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLG 153 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhC
Confidence 467899999999999999999999987 699999999999999999999999999999999999999999999999999
Q ss_pred ceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccc
Q 044926 89 AVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFS 168 (569)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (569)
++...||+++..+.|.|.++.++++++|++.+..+.+.+..+..... .-.++..+.....+ ...
T Consensus 154 v~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~--~i~~~~~~~~~~~~--------------g~~ 217 (649)
T KOG1179|consen 154 VITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKN--GIHVFSLGPTSVPD--------------GIE 217 (649)
T ss_pred ceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhc--cceEEecCCCCCCc--------------hHH
Confidence 99999999999999999999999999999999888777764433321 12233332221110 123
Q ss_pred hhhHhhhcCCCCc---ccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhh
Q 044926 169 TYESLVAKGDPEF---EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNG 245 (569)
Q Consensus 169 ~~~~~~~~~~~~~---~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g 245 (569)
++...++....++ ......+-.++++.+|||||||.||+.+++|...+..+..+...++++..|+++..+|+||+.+
T Consensus 218 ~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa 297 (649)
T KOG1179|consen 218 SLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAA 297 (649)
T ss_pred HHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHH
Confidence 3444443333332 2223355679999999999999999999999998888777888899999999999999999988
Q ss_pred hhH-HHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHH
Q 044926 246 WCF-PWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLL 324 (569)
Q Consensus 246 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~ 324 (569)
... .-.++..|+++++-.+|+...+|+...+|++|++.-.-.+.+.|++.+..+.+... ++| +.-|..+.++.++
T Consensus 298 ~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~H--kVR--la~GNGLR~diW~ 373 (649)
T KOG1179|consen 298 GILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQH--KVR--LAYGNGLRPDIWQ 373 (649)
T ss_pred HHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCc--eEE--EEecCCCCchHHH
Confidence 877 45567788888888999999999999999999999999999999998766554433 444 4557788899999
Q ss_pred HHH-hcCCe-eeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCC--------C
Q 044926 325 RTE-SLGFK-VSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKR--------D 394 (569)
Q Consensus 325 ~~~-~~~~~-i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~--------~ 394 (569)
.+. ++|+. |.+.||+||...........-+..... +...+.+.+. ++--+|+++|++... .
T Consensus 374 ~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~~vGA~G~~--------~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~ 444 (649)
T KOG1179|consen 374 QFVKRFGIIKIGEFYGATEGNSNLVNYDGRVGACGFM--------SRLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCP 444 (649)
T ss_pred HHHHHcCCCeEEEEeccccCcceeeeecCccccccch--------hhhhhhccce-EEEEecCCCCceeecCCceEEECC
Confidence 987 78765 999999999765444332221111111 0112223333 444456666655432 2
Q ss_pred CCceeEEEE--ecCcc---cccccCCcccccccc------CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHH
Q 044926 395 GSTLGEIVL--RGGCI---MLGYLKDPIGTRKCM------TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSV 463 (569)
Q Consensus 395 ~~~~Gel~v--~~~~~---~~gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~ 463 (569)
.+|.|.++- ....- +.||.+....++... .+|-||+|||+-.+|+.|++|+..|.+|.+...|++|+..
T Consensus 445 ~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTt 524 (649)
T KOG1179|consen 445 PGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTT 524 (649)
T ss_pred CCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHH
Confidence 358886652 22333 889999776665553 2466999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcceeEEEecCCCCCCce-eEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcc
Q 044926 464 EVESVLYSNPAVNEAAVVARPDEFWGET-PCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKI 542 (569)
Q Consensus 464 ~iE~~l~~~~~i~~~~v~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi 542 (569)
|||++|.....+.|+.|.|+.-+....+ =.|.|+..+... .+.+.+..++++.||.|.+|..+.+.++|++|.+-|.
T Consensus 525 EVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~--~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl 602 (649)
T KOG1179|consen 525 EVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTE--KDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKL 602 (649)
T ss_pred HHHHHHhhhccccceeEEEEecCCccCccceEEEEecCccc--chHHHHHHHHHhhCccccchHHHHHHhhhhcccchhh
Confidence 9999999999999999999977654322 245555666655 8999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcCCCCCcCc
Q 044926 543 QKFVLREIAENMGSSSSPLS 562 (569)
Q Consensus 543 ~r~~l~~~~~~~~~~~~~~~ 562 (569)
.+.+|+++-.+....++|++
T Consensus 603 ~K~~L~~egf~p~~~~dply 622 (649)
T KOG1179|consen 603 QKTELQKEGFNPAIISDPLY 622 (649)
T ss_pred HHHHHHHccCCccccCCceE
Confidence 99999999888888888764
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=4.6e-56 Score=453.90 Aligned_cols=399 Identities=28% Similarity=0.415 Sum_probs=317.6
Q ss_pred HHHHHHHcCCCCeEEe-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCC
Q 044926 20 LERAATVYGDSPSIIY-NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRL 98 (569)
Q Consensus 20 l~~~a~~~p~~~al~~-~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (569)
|+++|+++||++|+++ .++.+||+||+++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|++|++
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6899999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEEE----ccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhh
Q 044926 99 DARTVSLLLQHCQSKLVFV----DFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLV 174 (569)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (569)
+.+++.+++++++++++|+ +......+......... ...++.++...... ...+...
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------------~~~~~~~- 141 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDP---SSSIIILDRDDLPK---------------KEALKSA- 141 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTT---TEEEEEESHSSCTT---------------CHHHHHH-
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhccccc---cccccccccccccc---------------ccccccc-
Confidence 9999999999999999997 22222222232222111 23344444332111 0000000
Q ss_pred hcCCCCcccCCC-CCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhh--ccCCCCCCCEEEEecCchhhhhh-hHHH
Q 044926 175 AKGDPEFEWIRP-RTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTL--SDWSVPTQPVYLWTLPMFHSNGW-CFPW 250 (569)
Q Consensus 175 ~~~~~~~~~~~~-~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~--~~~~~~~~d~~~~~~pl~~~~g~-~~~~ 250 (569)
....... .+ ..++++++++|||||||.||+|.++|++++..+..+. ..++++ |++++..|++|.+|+ ...+
T Consensus 142 ~~~~~~~---~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~ 216 (417)
T PF00501_consen 142 SLSDEPQ---SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALL 216 (417)
T ss_dssp HHCHCSH---STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHH
T ss_pred ccccccc---cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccc
Confidence 0000000 00 0457999999999999999999999999988877754 223333 699999999999999 6788
Q ss_pred HHHHhCceEEEeccCC---HHHHHHHHHHhCcceeechhHHHHHHHcCCCCC----CCCCCcCCCceEEEeCCCCcHHHH
Q 044926 251 AMAAVGGTNICIRKFD---ASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPD----KKPLKLAKPVHLVTAGAPPPAAVL 323 (569)
Q Consensus 251 ~~~~~g~~~~~~~~~~---~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~----~~~~~~~~l~~~~~~g~~l~~~~~ 323 (569)
.++..|+++++++... ++.+++.++++++|++.++|+++..+++..... ...++ ++|.++++|+++++++.
T Consensus 217 ~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~--~lr~v~~~G~~l~~~~~ 294 (417)
T PF00501_consen 217 AALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLS--SLRTVISGGEPLPPDLL 294 (417)
T ss_dssp HHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGT--T-SEEEEESST-CHHHH
T ss_pred ccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccc--cccccccccccCChhhc
Confidence 8999999999988644 477899999999999999999999999832221 23444 89999999999999999
Q ss_pred HHHHh-cCC-eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEE
Q 044926 324 LRTES-LGF-KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEI 401 (569)
Q Consensus 324 ~~~~~-~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel 401 (569)
+++++ ++. +|++.||+||++++++.... ........++|.|.+++ +++|+|++++.+++.| +.|||
T Consensus 295 ~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~---------~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei 362 (417)
T PF00501_consen 295 RRLRKAFGNAPIINLYGSTETGSIATIRPP---------EDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEI 362 (417)
T ss_dssp HHHHHHHTTSEEEEEEEEGGGSSEEEEEET---------TTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEE
T ss_pred cccccccccccceecccccccceeeecccc---------ccccccccccccccccc-cccccccccccccccc--ccccc
Confidence 99984 565 89999999999988875420 11122345689999988 9999999889999888 88999
Q ss_pred EEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeC
Q 044926 402 VLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISG 456 (569)
Q Consensus 402 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~ 456 (569)
+++||+++.||+++++.+...|.++|||+|||+|++++||+++++||.+|+||++
T Consensus 363 ~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 363 VIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred cccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 9999999999999999999989866899999999999999999999999999964
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3e-51 Score=417.30 Aligned_cols=394 Identities=22% Similarity=0.230 Sum_probs=326.5
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 41 TWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 41 Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
||+||.+.++++|..|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++.++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecC
Q 044926 120 HSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTS 199 (569)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 199 (569)
+....+... ............ ..................+++++++|||
T Consensus 81 ~~~~~~~~~---------~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~i~~TS 129 (408)
T TIGR01733 81 ALASRLAGL---------VLPIILVDPLEL----------------------AALDDAPAPPPPDAPSGPDDLAYVIYTS 129 (408)
T ss_pred chhhhcccc---------CCceEEechhhh----------------------hhcccccccccccCCCCCCCcEEEEEcC
Confidence 765433221 112222111100 0000000000000113467999999999
Q ss_pred CCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEeccCC---HHHHHHHHHH
Q 044926 200 GTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFD---ASIIFDLIRR 276 (569)
Q Consensus 200 GtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~---~~~~~~~l~~ 276 (569)
||||.||+|.++|+++...+......+.+..+|++++..|++|.+++...+.++..|+++++.++.. +..+.+.+++
T Consensus 130 GTtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 209 (408)
T TIGR01733 130 GSTGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAE 209 (408)
T ss_pred CCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHH
Confidence 9999999999999999999988888888999999999999999999988899999999999887643 6889999999
Q ss_pred hCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcC-Ceeeecccccccccceeecccccc
Q 044926 277 HGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLG-FKVSHGYGLTETGGIVVSCAWKRN 354 (569)
Q Consensus 277 ~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~-~~i~~~YG~tE~~~~~~~~~~~~~ 354 (569)
+++|.+.++|.+++.+.+... ..+. ++|.+++||+++++.+.+.+. .++ +.+++.||+||+++++........
T Consensus 210 ~~~t~l~~~p~~~~~l~~~~~---~~~~--~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~ 284 (408)
T TIGR01733 210 HPVTVLNLTPSLLALLAAALP---PALA--SLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDAD 284 (408)
T ss_pred cCceEEEeCHHHHHHHHHhhh---hccc--CceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCcc
Confidence 999999999999999998754 3344 999999999999999999988 565 899999999999877753322211
Q ss_pred cccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCC------C-
Q 044926 355 WNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDD------G- 427 (569)
Q Consensus 355 ~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~- 427 (569)
.... . ...++|.+.++. +++|+|++ +..++.| +.|||+++|++++.||+++++.+...|..+ +
T Consensus 285 ~~~~-----~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~ 354 (408)
T TIGR01733 285 DAPR-----E-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGA 354 (408)
T ss_pred ccCC-----c-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCc
Confidence 1100 0 156789999998 99999986 7778777 899999999999999999998888777432 2
Q ss_pred -eeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEE
Q 044926 428 -WFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAV 480 (569)
Q Consensus 428 -~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 480 (569)
||+|||+|+++++|++++.||.+|+++.+|++++|.+||+++.+++.|.+++|
T Consensus 355 ~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 355 RLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred eEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 99999999999999999999999999999999999999999999999998764
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-47 Score=381.88 Aligned_cols=321 Identities=27% Similarity=0.380 Sum_probs=274.7
Q ss_pred CCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEe---c
Q 044926 187 RTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICI---R 263 (569)
Q Consensus 187 ~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~---~ 263 (569)
..++|+++++|||||||.||+|.++|+++..........+ ...++++..+|++|..++...+..++.|++.+++ .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3467999999999999999999999999988776655443 3557889999999999998888888889988873 3
Q ss_pred cCCHHHHHHHHHHhC--cceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCCeeeecccccc
Q 044926 264 KFDASIIFDLIRRHG--VTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTE 341 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~--~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~i~~~YG~tE 341 (569)
.+++..+++.+++++ .++...+|..+..++..... ...+. +++.+++||+++++.+.+++.+.++++++.||+||
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~--~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE 186 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALA--ELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSE 186 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcc--cceEEEECCCCCCHHHHHHHHhcCCcEEecccCCc
Confidence 478999999999998 55666788888777664332 22344 89999999999999999998888999999999999
Q ss_pred cccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcccccc
Q 044926 342 TGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRK 421 (569)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 421 (569)
+++.+. ..|.|.++. ++++.| |||+++|+.++.||++++...
T Consensus 187 ~~~~~~---------------------~~G~~~~g~-~v~i~~--------------Gei~v~g~~~~~gY~~~~~~~-- 228 (358)
T PRK07824 187 TSGGCV---------------------YDGVPLDGV-RVRVED--------------GRIALGGPTLAKGYRNPVDPD-- 228 (358)
T ss_pred cCCCcC---------------------cCceeCCCC-EEEecC--------------CEEEEecCccccccCCCcccc--
Confidence 865432 236677776 777722 999999999999999988643
Q ss_pred ccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCC
Q 044926 422 CMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEG 501 (569)
Q Consensus 422 ~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~ 501 (569)
.+..++||+|||+|++ ++|.+++.||.+|+|+.+|++|+|.+||.+|.++|+|.+++|++.+++..|+.++++++..++
T Consensus 229 ~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~ 307 (358)
T PRK07824 229 PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGG 307 (358)
T ss_pred cccCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCC
Confidence 3445789999999999 799999999999999999999999999999999999999999999998888888998877665
Q ss_pred CCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHh
Q 044926 502 SKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 502 ~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 553 (569)
.. ...++++++++++++.+++|..++++++||+|++||++|++|+++|.+
T Consensus 308 ~~--~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 308 PA--PTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CC--cCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 44 688999999999999999999999999999999999999999998864
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.9e-45 Score=406.48 Aligned_cols=489 Identities=17% Similarity=0.099 Sum_probs=356.3
Q ss_pred CCCCCCCCCCchHHHHHHHHHHcCCCCeEEeC---C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH
Q 044926 5 KPSPANSTPLTPLVFLERAATVYGDSPSIIYN---N--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYE 79 (569)
Q Consensus 5 ~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~---~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~ 79 (569)
++......-.|+.++|.+.++++|+++|+... + +.+||+|+.++++++|.+|.+.|+++||+|+|+++|+++|++
T Consensus 418 ~~~~~~~~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvi 497 (1452)
T PTZ00297 418 REYNPLAGVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVI 497 (1452)
T ss_pred hcCCCcccCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH
Confidence 34444444468999999999999999999742 3 689999999999999999999999999999999999999999
Q ss_pred HHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 80 LHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
+.+||+.+|++.||+++ ..+++.+++++++++++|++.+....+.+... . .++.+++++...... ... .
T Consensus 498 a~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~--~Lr~IIv~d~~~~~~--~~~--~ 566 (1452)
T PTZ00297 498 LEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---R--KLETVVYTHSFYDED--DHA--V 566 (1452)
T ss_pred HHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---c--CCcEEEEECCCcccc--ccc--c
Confidence 99999999999999975 46789999999999999999777665544322 1 367888875321100 000 0
Q ss_pred CCCCCcccchhhHhhhcCCCCc-ccCCCCCCCCceEEEe---cCCCCCCCceEEEchHHHHHHHhhhhccC---CCCCCC
Q 044926 160 NISDDQFFSTYESLVAKGDPEF-EWIRPRTEWDPIVLNY---TSGTTMSPKGVVHCHRGIFIVAVNTLSDW---SVPTQP 232 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~---TSGtTG~pk~v~~t~~~l~~~~~~~~~~~---~~~~~d 232 (569)
....+....+|+++++.+.... .......++|++.|+| ||||||.||||++||++++.++....... ....+|
T Consensus 567 ~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D 646 (1452)
T PTZ00297 567 ARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKH 646 (1452)
T ss_pred cccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCC
Confidence 0001112456888887654211 1112346788998885 99999999999999999998887765432 356789
Q ss_pred EEEEecCchhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCC------------
Q 044926 233 VYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDK------------ 300 (569)
Q Consensus 233 ~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~------------ 300 (569)
++++.+|++|+++....+.++..|+++.. +++..+++.|++++||++.++|.+++.+.+......
T Consensus 647 ~~Ls~LPLaHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~ 723 (1452)
T PTZ00297 647 LMVHFTPFAMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFE 723 (1452)
T ss_pred EEEEechHHHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 99999999999997777777888888753 478999999999999999999999997765321100
Q ss_pred -------------CC-C--------------CcCCCceEEEeCC--CCcHHHHHHHHhcCCeeeecccccccccceeecc
Q 044926 301 -------------KP-L--------------KLAKPVHLVTAGA--PPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCA 350 (569)
Q Consensus 301 -------------~~-~--------------~~~~l~~~~~~g~--~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~ 350 (569)
.. . -..++|.+++||. +++.. ...++++..+||+||+. +...
T Consensus 724 ~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~-----l~~~i~i~~g~glTE~~---~~~~ 795 (1452)
T PTZ00297 724 RAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFS-----LLEHISVCYVPCLREVF---FLPS 795 (1452)
T ss_pred HHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChH-----HhCCceEEEecceEEee---eecC
Confidence 00 0 0257889998873 44422 23468899999999942 1111
Q ss_pred cccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCCCeee
Q 044926 351 WKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFY 430 (569)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 430 (569)
.... ...|.|.|++ +++|.+....... + ..|||++++ +++|+.|... . ++|+
T Consensus 796 -~~~~------------~~~G~Plpgv-EvKI~~~~E~~~~--~--~~GEIlvr~-------~kdpe~T~e~-~-~gW~- 847 (1452)
T PTZ00297 796 -EGVF------------CVDGTPAPSL-QVDLEPFDEPSDG--A--GIGQLVLAK-------KGEPRRTLPI-A-AQWK- 847 (1452)
T ss_pred -CCCc------------ccCCeecCce-EEEEcccccccCC--C--CCCeEEEEE-------CCChHHHHHh-h-CcCc-
Confidence 1110 1239999999 9999874221111 1 359999964 4778777653 2 5664
Q ss_pred ecceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC-----
Q 044926 431 TGDVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS----- 504 (569)
Q Consensus 431 TGD~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----- 504 (569)
+||+|+|.||.+|+|| .+|+.|.|+.||..+...|.|.+++|++..++. ++++|++....-.
T Consensus 848 --------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~ 915 (1452)
T PTZ00297 848 --------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQ 915 (1452)
T ss_pred --------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHH
Confidence 6999999999999999 899999999999999999999999999987643 7788776531110
Q ss_pred ------------CCCHHH--------HHHHH---h--ccCCCCccccEEEEe-ccc-----CCCCCCcccHHHHHHHHHh
Q 044926 505 ------------KPTEKE--------MIEYC---R--GRLPHYMVPKTVVFM-DEL-----PKTSTGKIQKFVLREIAEN 553 (569)
Q Consensus 505 ------------~~~~~~--------l~~~l---~--~~l~~~~~p~~~~~~-~~i-----P~t~~GKi~r~~l~~~~~~ 553 (569)
....++ +.+.+ . +.+..+.+++.+.++ +++ -+|++.|+.|+.+.+.|++
T Consensus 916 ~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~ 995 (1452)
T PTZ00297 916 SHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSS 995 (1452)
T ss_pred HcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHH
Confidence 012222 22222 1 225567788877665 345 3899999999999988877
Q ss_pred cC
Q 044926 554 MG 555 (569)
Q Consensus 554 ~~ 555 (569)
.-
T Consensus 996 ~I 997 (1452)
T PTZ00297 996 VI 997 (1452)
T ss_pred HH
Confidence 54
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-38 Score=339.12 Aligned_cols=411 Identities=20% Similarity=0.219 Sum_probs=338.5
Q ss_pred CCchHHHHHHHHHHcCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 13 PLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
..++...|.+++...|+.+|+.+.+..+||+++..+++++|..|.+.|+.+++.|+++++++.+++++++|++++|+.++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 36799999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|++|..+.+++..++++++++.+++.......... ... +.+.... ..
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~-------------------~~--- 352 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG----------LPG-LALDDAL-------------------SE--- 352 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEecccccccccc----------CCc-ccccccc-------------------cc---
Confidence 99999999999999999999999998332210000 010 1111000 00
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhHHHHH
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~~~~~ 252 (569)
... .........+++.++++|||||||.||||..+|+++.....+....+.++..|+++...++.+.......+..
T Consensus 353 ---~~~-~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~ 428 (642)
T COG1020 353 ---IPD-TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGA 428 (642)
T ss_pred ---CCc-cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHH
Confidence 000 0000112345789999999999999999999999999878888777999999999999998888888888999
Q ss_pred HHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHh-
Q 044926 253 AAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTES- 328 (569)
Q Consensus 253 ~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~- 328 (569)
++.|+.+++.+. .++..+...+.++++|.+..+|.++..++..............++.+++||+.++..+...+..
T Consensus 429 l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~ 508 (642)
T COG1020 429 LLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQL 508 (642)
T ss_pred HhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHh
Confidence 999999999864 6899999999999999999999999999876322222222225899999999999999998764
Q ss_pred c--CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecC
Q 044926 329 L--GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGG 406 (569)
Q Consensus 329 ~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~ 406 (569)
. ...+.+.||.||+...+........ . .. ...+|.|.++. .+.|+| +.+..++.+ ..||+++.|.
T Consensus 509 ~~~~~~l~~~ygpTe~~~~~~~~~~~~~-------~-~~-~~piG~p~~n~-~~~ild-~~~~~~p~g--v~gel~i~g~ 575 (642)
T COG1020 509 AALARRLLNLYGPTEATLDAPSFPISAE-------L-ES-RVPIGRPVANT-QLYILD-QGLRPLPLG--VPGELYIAGL 575 (642)
T ss_pred ccccceEeeccCccHHhhheeeEEcccc-------c-CC-CCCcceeeCCC-eEEEEC-CCCCcCCCC--CCeeeEECCc
Confidence 3 4689999999996554443322111 0 00 46789999986 999999 588888888 7899999999
Q ss_pred cccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCC
Q 044926 407 CIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNP 473 (569)
Q Consensus 407 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~ 473 (569)
.+.+||++.++.+..+|..+.+|+|||++++.+||.+.++||.|+++|++|.+|.+.+||..+.++|
T Consensus 576 ~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 576 GLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred chhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 9999999999999999984458999999999999999999999999999999999999999998765
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=1.5e-38 Score=314.68 Aligned_cols=287 Identities=26% Similarity=0.262 Sum_probs=226.2
Q ss_pred CceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCC--CCEEEEecCchhhhhhhH-HHHHHHhCceEEEeccCCH
Q 044926 191 DPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPT--QPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIRKFDA 267 (569)
Q Consensus 191 ~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~--~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~~~~ 267 (569)
..++++|||||||.||+|.++|+++...+......+++.. .|++++.+|++|.+|+.+ .+.++..|+++++.+.+++
T Consensus 96 ~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~ 175 (386)
T TIGR02372 96 TARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPA 175 (386)
T ss_pred CceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCCh
Confidence 5789999999999999999999999888877777777643 468999999999999855 5566778999888888888
Q ss_pred HHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHHhcCC-eeeecccccccccce
Q 044926 268 SIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGF-KVSHGYGLTETGGIV 346 (569)
Q Consensus 268 ~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~-~i~~~YG~tE~~~~~ 346 (569)
..+++.++.+ |++.++|.++..+.+.. ..++ +++. ++||+++++++.+.+++.+. .+++.||+||+++++
T Consensus 176 ~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~--slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 176 SGIMRHARPG--DLIVGTPFIWEQLADLD----YRLP--GVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIG 246 (386)
T ss_pred HHHHHhhccC--CEEEECcHHHHHHHhhC----cCCC--ccee-EecCCCCCHHHHHHHHHhcccchhheeccccccccc
Confidence 8888887653 89999999999998653 2233 6665 68899999999999987664 699999999998755
Q ss_pred eecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccccccCCC
Q 044926 347 VSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDD 426 (569)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 426 (569)
..... ...+.+.++. ++.+ + ++. + .|+ .
T Consensus 247 ~~~~~----------------~~~~~~~p~~-~~~~-~--~~~----------~---~g~-------------------~ 274 (386)
T TIGR02372 247 LREAP----------------DDPFRLLPDL-ACFA-D--TLS----------S---AGL-------------------A 274 (386)
T ss_pred cccCC----------------CCCcccCCCc-cccC-C--Ccc----------C---CCc-------------------c
Confidence 43210 1123344433 2221 1 110 0 011 2
Q ss_pred CeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCC
Q 044926 427 GWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKP 506 (569)
Q Consensus 427 ~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 506 (569)
.|++|||+|+++++|++++.||.||+|+++|++|+|.+||++|.++|+|.+++|.. .|+.+.++|++.++.....
T Consensus 275 ~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~ 349 (386)
T TIGR02372 275 RRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAE 349 (386)
T ss_pred ceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHH
Confidence 36899999999999999999999999999999999999999999999999998863 2567888888876543111
Q ss_pred CHHHHHHHHhccCCCCccccEEEEecccCCCCCCccc
Q 044926 507 TEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQ 543 (569)
Q Consensus 507 ~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~ 543 (569)
..++++++++++++.+++|..+.++++||+|++||++
T Consensus 350 ~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 350 LEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 2568999999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=8.2e-37 Score=310.59 Aligned_cols=327 Identities=17% Similarity=0.120 Sum_probs=238.1
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhh---hccCCCCCCCEEEEecCchhh-hhhhHHHHHHHhCceEEEec
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNT---LSDWSVPTQPVYLWTLPMFHS-NGWCFPWAMAAVGGTNICIR 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~---~~~~~~~~~d~~~~~~pl~~~-~g~~~~~~~~~~g~~~~~~~ 263 (569)
+.++++.+++||||||.||++.++|.++..+.... ...+++.++|++++..+..+. .++...+.....|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 44578899999999999999999999986654332 234578899999887665432 23333455667888888777
Q ss_pred cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeeccccccc
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTET 342 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~ 342 (569)
..+++.+++.|++++||++.++|+++..|++.......+....++|.++++|+++++.+.+.++ .+++++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 7788999999999999999999999999987654333333223899999999999999999987 579999999999998
Q ss_pred ccceeecccccccccCcHHHHhhhhcccCccccc-ceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcccccc
Q 044926 343 GGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTA-LTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRK 421 (569)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 421 (569)
++....+.+.. ...|.+... ...++|+|++++.+++.| +.|||++++. +..
T Consensus 233 ~~~~~~~~~~~--------------~~~g~~~~~~~~~~eivd~~~g~~v~~G--e~Gelvvt~~------------~~~ 284 (422)
T TIGR02155 233 IGPGVAMECVE--------------TQDGLHIWEDHFYPEIIDPHTGEVLPDG--EEGELVFTTL------------TKE 284 (422)
T ss_pred cCCceeecccc--------------cCCCceEecCeeEEEEECCCCCCCCCCC--CeeEEEEecC------------Ccc
Confidence 53222211100 011222221 127789998889999887 8999999973 233
Q ss_pred ccCCCCeeeecceEEEecC-C-----cEEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEE
Q 044926 422 CMTDDGWFYTGDVGVMHSD-G-----YLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAF 495 (569)
Q Consensus 422 ~~~~~~~~~TGD~~~~~~d-g-----~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~ 495 (569)
.++ .+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|...+++........+.+.+.
T Consensus 285 ~~p-~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~ 363 (422)
T TIGR02155 285 ALP-VIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLK 363 (422)
T ss_pred ccc-eeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEE
Confidence 344 679999999999876 4 468999999999999999999999999999999984444444444434567777
Q ss_pred EEecCCCCCC---C----CHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHH
Q 044926 496 VSLKEGSKSK---P----TEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKF 545 (569)
Q Consensus 496 v~~~~~~~~~---~----~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~ 545 (569)
|+..++.... . ..++|++.+++++..+.. ..++.+++||+|+ ||+.|.
T Consensus 364 v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 364 VELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 7766443210 1 146677888887765532 2333347999988 998763
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=1.9e-33 Score=285.81 Aligned_cols=516 Identities=15% Similarity=0.157 Sum_probs=359.6
Q ss_pred CchHHHHHHHHHHcCCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhh
Q 044926 14 LTPLVFLERAATVYGDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSI-GISRGHVVSVVSPNVPALYELHFAVPF 86 (569)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~ 86 (569)
.|+.++|++.+..+||.+|+...+ .++||++|..+|.+++..|.+. -+++||.|++++++++|++++++||++
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 789999999999999999998744 6899999999999999999976 679999999999999999999999999
Q ss_pred ccceEeeccCCC------CHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCC-CCCEEEEeCCCcccccccCCCC
Q 044926 87 AAAVLNTINTRL------DARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLK-PPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 87 ~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
+|.+++|+.|-. ....+..+++.+++.+|+++......++........+.+ .+.+.+..+.....
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~-------- 921 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETI-------- 921 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhh--------
Confidence 999999998843 345688999999999999998876655543222111111 12222222211000
Q ss_pred CCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecC
Q 044926 160 NISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLP 239 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p 239 (569)
........+..... +.....++.+|++-+.--++|.-.++.++|.++++.++.......+.+..-++...+
T Consensus 922 -------~k~~~~~~k~~~~~--~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~ 992 (1363)
T KOG3628|consen 922 -------RKRKKNIKKLNTPT--PPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSS 992 (1363)
T ss_pred -------hhhhhhhhccCCCC--CccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEec
Confidence 01111111111111 112255678999999989999999999999999999999999888888877777777
Q ss_pred chhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCC----cCCCce
Q 044926 240 MFHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLK----LAKPVH 310 (569)
Q Consensus 240 l~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~----~~~l~~ 310 (569)
.+...|+.. ++...+.|...+++++ .++..++..++++++.-++.+-..++.+.+....+..++. ..+...
T Consensus 993 ~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~ 1072 (1363)
T KOG3628|consen 993 PYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSI 1072 (1363)
T ss_pred CccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccce
Confidence 777777654 7788889999888875 5789999999999999999988888877765444333322 001234
Q ss_pred EEEeCCCCcHHHHHHHHhc----CC---eeeecccccccccceeeccccccccc--CcH-HHHhhhh-------------
Q 044926 311 LVTAGAPPPAAVLLRTESL----GF---KVSHGYGLTETGGIVVSCAWKRNWNL--LPA-AEKAKLK------------- 367 (569)
Q Consensus 311 ~~~~g~~l~~~~~~~~~~~----~~---~i~~~YG~tE~~~~~~~~~~~~~~~~--~~~-~~~~~~~------------- 367 (569)
++..-++....+...+.+. |. .+-..|+..=--.++.....+.+-.. +.. .......
T Consensus 1073 vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L 1152 (1363)
T KOG3628|consen 1073 VVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLL 1152 (1363)
T ss_pred eeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcccc
Confidence 5555677777777766532 22 23334443322222221111000000 000 0000000
Q ss_pred cccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcc-cccccc---------CCCCeeeecceEEE
Q 044926 368 ARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPI-GTRKCM---------TDDGWFYTGDVGVM 437 (569)
Q Consensus 368 ~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~-~~~~~~---------~~~~~~~TGD~~~~ 437 (569)
-..|..++++ ++.|++|++-.++..| +.||||+.|.+-+.+|+...+ .....| ...+|-||||+|++
T Consensus 1153 ~dSG~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl 1229 (1363)
T KOG3628|consen 1153 YDSGKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFL 1229 (1363)
T ss_pred ccCCcccccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeee
Confidence 1126666666 9999999999999888 999999999998888875321 111111 12459999999997
Q ss_pred ecC----------CcEEEeccCCCeEEeCceeeeHHHHHHHHHc-CCCcceeEEEecCCCCCCceeEEEEEecCCCCCCC
Q 044926 438 HSD----------GYLEIKDRSKDVIISGGENLSSVEVESVLYS-NPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKP 506 (569)
Q Consensus 438 ~~d----------g~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~-~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 506 (569)
+.. ..||++|-.++.+..+|.+.+|.+||..+.+ ||.|.+|+|+.+. ..+|++++.... .
T Consensus 1230 ~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~-----glvVvviE~~gq----~ 1300 (1363)
T KOG3628|consen 1230 RRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT-----GLVVVVIECHGQ----Q 1300 (1363)
T ss_pred eeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC-----CeEEEEEEecCc----h
Confidence 521 3589999999999999999999999998885 8999999999884 456666666552 2
Q ss_pred CHHHHHHHH-hccCCCCc-cccEEEEec--ccCCCCCCcccHHHHHHHHHhcCCCC
Q 044926 507 TEKEMIEYC-RGRLPHYM-VPKTVVFMD--ELPKTSTGKIQKFVLREIAENMGSSS 558 (569)
Q Consensus 507 ~~~~l~~~l-~~~l~~~~-~p~~~~~~~--~iP~t~~GKi~r~~l~~~~~~~~~~~ 558 (569)
...+|.-.+ ...|.+|. +-+.+.+++ .+|+++.|..+|..+++.+.......
T Consensus 1301 ~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~~ 1356 (1363)
T KOG3628|consen 1301 ELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLDP 1356 (1363)
T ss_pred hHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccce
Confidence 333333333 33344454 444566664 69999999999999999887766543
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.2e-32 Score=285.37 Aligned_cols=502 Identities=21% Similarity=0.217 Sum_probs=334.6
Q ss_pred chHHHHHHHHHHcCCCCeEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhh
Q 044926 15 TPLVFLERAATVYGDSPSIIYNN--------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPF 86 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~--------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~ 86 (569)
++...+.+.+...|...+..+.- ..+||++....++.+++.|...|...|+.|++++..+.++++..+|+++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 56778888899998887765521 5799999999999999999999999999999999999999999999999
Q ss_pred ccceEeeccCCCC----HHHHHH---HHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926 87 AAAVLNTINTRLD----ARTVSL---LLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP 159 (569)
Q Consensus 87 ~G~~~v~l~~~~~----~~~l~~---~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (569)
+|..+++++|+++ ++.+.. .+...... +... .+........... -..+...
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~--i~~~--l~i~~~~~~~~~~---~~sv~~~--------------- 174 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELE--IVRR--LNIIDILLNSLFP---KLSVETI--------------- 174 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccce--ehhh--hhhHHHHhhcccc---ccchhhc---------------
Confidence 9999999999999 332221 11111111 1110 0000000000000 0000000
Q ss_pred CCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecC
Q 044926 160 NISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLP 239 (569)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p 239 (569)
...|..+...... ......-++..+.+.||||+||.||+|..+|..+.....+....+..+..+++-....
T Consensus 175 -------~~~f~~~~~~~~~--r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~ 245 (1032)
T KOG1178|consen 175 -------ADSFQMVLHNEDT--REIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTS 245 (1032)
T ss_pred -------cchhhhhhccCCC--cceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhhe
Confidence 0111111111111 1112244567999999999999999999999999999999998888888887622233
Q ss_pred chhhhhhhHHHHHHHhCceEEEec-c---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCC-----------CC
Q 044926 240 MFHSNGWCFPWAMAAVGGTNICIR-K---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKP-----------LK 304 (569)
Q Consensus 240 l~~~~g~~~~~~~~~~g~~~~~~~-~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~-----------~~ 304 (569)
.+........+.+++..+..+..+ . .++..+.+.+++++++..+.+|++.+.++......... -.
T Consensus 246 ~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~ 325 (1032)
T KOG1178|consen 246 VYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTK 325 (1032)
T ss_pred eecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhccccccc
Confidence 334444444566666666655543 2 34789999999999999999999988777765442111 11
Q ss_pred cCCCceEEEeCCCCcHHHHHHHHhc---CCeeeecccccccccceeecccccccccCcHHHHh---hhhcccCcccccce
Q 044926 305 LAKPVHLVTAGAPPPAAVLLRTESL---GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKA---KLKARQGVKTTALT 378 (569)
Q Consensus 305 ~~~l~~~~~~g~~l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 378 (569)
...++....+|++....+...+... ++... -|+.++..+.+....+.+.-..+....-. .....+|.+.
T Consensus 326 ~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~-~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~---- 400 (1032)
T KOG1178|consen 326 RSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGL-PYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLT---- 400 (1032)
T ss_pred chhheeeeecCCccchhhhhhhhhcccceeeee-cccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCc----
Confidence 2378889999999999888855532 22222 27888876666543322210000000000 0000011000
Q ss_pred eeEEeCCCCCcccCCC--CCceeEEEEecCcccccccCCcccccccc--C---CCCeeeecceEEEecCCcEEEeccCCC
Q 044926 379 EVDVLDPKSGVSAKRD--GSTLGEIVLRGGCIMLGYLKDPIGTRKCM--T---DDGWFYTGDVGVMHSDGYLEIKDRSKD 451 (569)
Q Consensus 379 ~~~i~d~~~~~~~~~~--~~~~Gel~v~~~~~~~gy~~~~~~~~~~~--~---~~~~~~TGD~~~~~~dg~l~~~GR~~~ 451 (569)
...+... .+.+...+ .++.|+-...++.+..|| ..++....++ . .+.+|+|||.|+..++|.+.+.||.|+
T Consensus 401 ~~~~~~~-~~~~~~~~v~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~ 478 (1032)
T KOG1178|consen 401 VLESLYR-AGGEGEGGVGKGCLGAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADR 478 (1032)
T ss_pred ceeeeec-cCcccCCcccceeecccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccc
Confidence 1122221 22222222 112222223334444452 2222222221 1 134799999999888999999999999
Q ss_pred eEEeCceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEe
Q 044926 452 VIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFM 531 (569)
Q Consensus 452 ~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~ 531 (569)
+||.+|.++...+|+..+..+|.|.++.+....+...++.+++||+....... .....|+.++.++|+.|++|..++.+
T Consensus 479 qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~-~~~~~i~~~l~~~La~y~vPs~~V~l 557 (1032)
T KOG1178|consen 479 QIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS-VLIRDIRNYLKKELASYMLPSLVVPL 557 (1032)
T ss_pred eEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc-hhHHHHHHhhcccccceecceEEEEh
Confidence 99999999999999999999999999999999998888999999998876543 45788999999999999999999999
Q ss_pred cccCCCCCCcccHHHHHHHHHhcC
Q 044926 532 DELPKTSTGKIQKFVLREIAENMG 555 (569)
Q Consensus 532 ~~iP~t~~GKi~r~~l~~~~~~~~ 555 (569)
+++|+|++||+|+++|.+...+..
T Consensus 558 ~~vPl~~~GKvDkkaL~~~~s~~~ 581 (1032)
T KOG1178|consen 558 AKVPLNPNGKVDKKALLEYNSKLT 581 (1032)
T ss_pred hhCCcCCCCCcChhhhhhhhhhhc
Confidence 999999999999999998665554
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=1.1e-29 Score=258.04 Aligned_cols=324 Identities=19% Similarity=0.129 Sum_probs=218.9
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEec
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIR 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~ 263 (569)
+.++++.+.+||||||.||++.+||+++..+....... .++.++|+++...|..+..+... .+++...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 45688899999999999999999999987766554433 48899999999888766555433 345566777654333
Q ss_pred cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeeccccccc
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTET 342 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~ 342 (569)
.....++.|++++++.+.++|+.+..+++.+.....+....++|.+++||+++++.+++.++ .+|+++++.||+||+
T Consensus 164 --~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~ 241 (445)
T TIGR03335 164 --KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEG 241 (445)
T ss_pred --chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhh
Confidence 23467899999999999999999888877544333222223899999999999999998887 579999999999998
Q ss_pred ccceeecccccccccCcHHHHhhhhcccCccccc-ceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCcccccc
Q 044926 343 GGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTA-LTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRK 421 (569)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 421 (569)
+ ++..|.... |...+. ...++|+|++++.+++.| +.|||++++-...- ++.
T Consensus 242 ~-~~~~c~~~~-----------------g~h~~~d~~~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~--------~r~ 293 (445)
T TIGR03335 242 T-MCGECQAVA-----------------GLHVPEDLVHLDVYDPRHQRFLPDG--ECGRIVLTTLLKPG--------ERC 293 (445)
T ss_pred h-heEEecCCC-----------------CccccCCceEEEEEcCCCCCCCcCC--CceEEEEEecCCCC--------ccC
Confidence 5 333432211 222221 127999999888888887 89999999732100 000
Q ss_pred ccCCCCeeeecceEEEec-C----C----cEEEeccCCCeEEeCceeeeHHHHHHHHHcC---CCcc-eeEEEecCCCCC
Q 044926 422 CMTDDGWFYTGDVGVMHS-D----G----YLEIKDRSKDVIISGGENLSSVEVESVLYSN---PAVN-EAAVVARPDEFW 488 (569)
Q Consensus 422 ~~~~~~~~~TGD~~~~~~-d----g----~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~---~~i~-~~~v~~~~~~~~ 488 (569)
.++ --.|+|||++++.. + | ++...||.||+++++|.+++|.+||++|.++ +++. +..++.......
T Consensus 294 ~~P-liRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~ 372 (445)
T TIGR03335 294 GSL-LINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEG 372 (445)
T ss_pred Cce-EEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCC
Confidence 111 23599999999732 3 2 2445699999999999999999999999994 5554 333443333222
Q ss_pred CceeEEEEEecCCCCCCCCHHHHHHHHhcc----CC-------CCccccEEEEe--cccCCCC-CCcccH
Q 044926 489 GETPCAFVSLKEGSKSKPTEKEMIEYCRGR----LP-------HYMVPKTVVFM--DELPKTS-TGKIQK 544 (569)
Q Consensus 489 ~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~----l~-------~~~~p~~~~~~--~~iP~t~-~GKi~r 544 (569)
...+.+.|+..+... ...+++.+.+.+. ++ ...+...+.++ ..|||++ .||..|
T Consensus 373 ~~~~~v~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECEDKDN--CSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecCccc--chHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 234555566654432 2333444333333 21 22233344444 4799984 688765
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.97 E-value=8.5e-29 Score=237.58 Aligned_cols=324 Identities=21% Similarity=0.216 Sum_probs=241.0
Q ss_pred CCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC---CCCCCCEEEEecCc-hhhhhhhHHHHHHHhCceEEEe
Q 044926 187 RTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW---SVPTQPVYLWTLPM-FHSNGWCFPWAMAAVGGTNICI 262 (569)
Q Consensus 187 ~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~pl-~~~~g~~~~~~~~~~g~~~~~~ 262 (569)
...++...|..||||||+|+-+.+|+..+..++..+++.+ +...+|++...... .+..|+..-.++--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 4455777799999999999999999999988887777765 67889988766552 2233344445555577777776
Q ss_pred ccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccc
Q 044926 263 RKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTE 341 (569)
Q Consensus 263 ~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE 341 (569)
..-+.+..+.+++.+++|++.++|+.+..|++.+...+....-.++|.+++|+|+++++.+..++ ++|+.+++.||+||
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 66788999999999999999999999999999987765333334899999999999999999998 78999999999999
Q ss_pred cccc-eeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccccccCCccccc
Q 044926 342 TGGI-VVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTR 420 (569)
Q Consensus 342 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 420 (569)
..+. +..|....+.+.+.+. ..++|+||++|+.++.| +.|||+++. +++
T Consensus 247 ~~g~g~~eC~~~~glhi~eD~----------------~~~Ei~dP~t~e~l~dg--e~GelV~T~------------L~~ 296 (438)
T COG1541 247 GFGPGAGECTERNGLHIWEDH----------------FIFEIVDPETGEQLPDG--ERGELVITT------------LTK 296 (438)
T ss_pred ccCCcccccccccCCCcchhh----------------ceeeeecCCcCccCCCC--CeeEEEEEe------------ccc
Confidence 9766 3555544433333332 28999999999999988 899999997 222
Q ss_pred cccCCCCeeeecceEEEecC----Cc-----EEEeccCCCeEEeCceeeeHHHHHHHHHcCCCcc-eeEEEecCCCCCCc
Q 044926 421 KCMTDDGWFYTGDVGVMHSD----GY-----LEIKDRSKDVIISGGENLSSVEVESVLYSNPAVN-EAAVVARPDEFWGE 490 (569)
Q Consensus 421 ~~~~~~~~~~TGD~~~~~~d----g~-----l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~~~i~-~~~v~~~~~~~~~~ 490 (569)
..++ --.|+|||++.+.++ |+ ..+.||.||++++.|.+|+|..||.+|.+.+++. +.+++... ....+
T Consensus 297 ~~~P-lIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d 374 (438)
T COG1541 297 EGMP-LIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLD 374 (438)
T ss_pred cCcc-eEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCc
Confidence 2222 336999999999864 32 4589999999999999999999999999999999 66666665 44456
Q ss_pred eeEEEEEecCCCCCCCCHHHHHHHHhccCC-CCcccc--EEEEecccCCCCCCccc
Q 044926 491 TPCAFVSLKEGSKSKPTEKEMIEYCRGRLP-HYMVPK--TVVFMDELPKTSTGKIQ 543 (569)
Q Consensus 491 ~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~-~~~~p~--~~~~~~~iP~t~~GKi~ 543 (569)
.+.+.|+..+++.......++...+...+- ...... .++.+.++||+. ||..
T Consensus 375 ~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~-~K~k 429 (438)
T COG1541 375 ELTVRVELENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTE-GKAK 429 (438)
T ss_pred eEEEEEEecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceeccc-Ccee
Confidence 678888887653211122222233333322 122333 344446899995 4643
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=2.3e-25 Score=204.09 Aligned_cols=218 Identities=13% Similarity=0.064 Sum_probs=163.5
Q ss_pred HHHHHHHcCCCCeEEeC------CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 20 LERAATVYGDSPSIIYN------NITYTWSDTHHRCLQLASSLLS-IGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 20 l~~~a~~~p~~~al~~~------~~~~Ty~el~~~v~~~A~~L~~-~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
|...++.+|+++|+++. ++++||+||.++++++|.+|++ .|+++||+|+|+++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56788899999999752 2369999999999999999998 6999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcccchhhH
Q 044926 93 TINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYES 172 (569)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (569)
|++ .+++++++++++..+... . ...++.+........ .. .....+ ...+.+
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~---~~-~~~~~~--~~~~~~ 132 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA-----G-----SGEVVALSLDPLGRR---VA-GELPPG--VIDFAP 132 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc-----c-----CCceEEEeccccccC---CC-CCCCCc--ccchhh
Confidence 995 789999999987766532 1 133333322110000 00 000011 134555
Q ss_pred hhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecCchhhhhhhH-HHH
Q 044926 173 LVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCF-PWA 251 (569)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~pl~~~~g~~~-~~~ 251 (569)
.+........+.....++|++.++||||+ +|.+++... ...+++++|+++ ..|++|.+|+.. .+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~ 198 (227)
T TIGR03089 133 EVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLA 198 (227)
T ss_pred hhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHH
Confidence 45432222221112456899999999986 566665544 456789999999 999999999965 678
Q ss_pred HHHhCceEEEeccCCHHHHHHHHHHhCcc
Q 044926 252 MAAVGGTNICIRKFDASIIFDLIRRHGVT 280 (569)
Q Consensus 252 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~t 280 (569)
++..|+++++.++|++..+++.|+++++|
T Consensus 199 ~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 199 PLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 88899999999999999999999999987
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=2.1e-21 Score=187.85 Aligned_cols=121 Identities=25% Similarity=0.318 Sum_probs=111.2
Q ss_pred CCeeeecceEEE-ecCCcEEEeccCCCeEEeCc---eeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCC
Q 044926 426 DGWFYTGDVGVM-HSDGYLEIKDRSKDVIISGG---ENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEG 501 (569)
Q Consensus 426 ~~~~~TGD~~~~-~~dg~l~~~GR~~~~i~~~G---~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~ 501 (569)
+|||+|||+|++ |+||++++.||.+ +| ++|+|. ||++|.+||+|.+|+|++++++.+|+.++++|+...
T Consensus 208 dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~- 280 (365)
T PRK09188 208 RIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL- 280 (365)
T ss_pred CcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC-
Confidence 899999999998 6999999999998 78 799999 999999999999999999999999999999998763
Q ss_pred CCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHHHHhcCCC
Q 044926 502 SKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSS 557 (569)
Q Consensus 502 ~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 557 (569)
. .+.++++++++++|+. ++|..+.++++||+|++||++|++|++.+.+....
T Consensus 281 -~--~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~~~ 332 (365)
T PRK09188 281 -P--ADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQIDE 332 (365)
T ss_pred -C--CCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhccccc
Confidence 2 5778999999999999 99999999999999999999999999987555433
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.85 E-value=3.2e-19 Score=183.06 Aligned_cols=506 Identities=15% Similarity=0.093 Sum_probs=324.3
Q ss_pred chHHHHHHHHHHcCCCCeEEeCC-----eeeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhh
Q 044926 15 TPLVFLERAATVYGDSPSIIYNN-----ITYTWSDTHHRCLQLAS-SLLSIGISRGHVVSVVSPNV--PALYELHFAVPF 86 (569)
Q Consensus 15 tl~~~l~~~a~~~p~~~al~~~~-----~~~Ty~el~~~v~~~A~-~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~ 86 (569)
.+...++..-.+++.+.|.++-+ ..+||..+..++.++|+ .|.+.|+.++|+|.+++..+ +++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 35566666667788888888744 58999999999999999 66677999999999998774 899999999999
Q ss_pred ccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCCCCCcc
Q 044926 87 AAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQF 166 (569)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (569)
.|.+++|+.+..+.+++..+++....+++++.......+........ ..+.
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s----~~k~------------------------- 225 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVS----LAKA------------------------- 225 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCccc----HHHH-------------------------
Confidence 99999999999999999999999999999998765443322110000 0000
Q ss_pred cchhhHhhhcCCCC-cccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhh---------------h-----hcc
Q 044926 167 FSTYESLVAKGDPE-FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVN---------------T-----LSD 225 (569)
Q Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~---------------~-----~~~ 225 (569)
+.+|....-.+.-. .....+.-.-...+|-||.+++|.--|++++|. ++.+.+. + ...
T Consensus 226 v~~w~t~~~k~~~~~~k~~~P~~~~~~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v 304 (1363)
T KOG3628|consen 226 VAWWKTNDFKGNYTKDKIKKPRMQLPYGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHV 304 (1363)
T ss_pred HHhhhcccccceeehhhccCCceeeeeEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhc
Confidence 00000000000000 000011111127899999999999999999998 4322221 1 112
Q ss_pred CCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEecc---CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCC---
Q 044926 226 WSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIRK---FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP--- 298 (569)
Q Consensus 226 ~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~--- 298 (569)
+++...+.++.........|+.+ .+.+++.|.+.+-+++ ..|..+.+++.+++.+++..--..+.........
T Consensus 305 ~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~ 384 (1363)
T KOG3628|consen 305 FPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPK 384 (1363)
T ss_pred cccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcc
Confidence 34456667777776666777765 5677889999988887 6778899999999999998776655544332211
Q ss_pred ------CCCCCCcCCCceEEEeCCCCcHHHHHHHH-----hcCC---ee---------------eecccccccccceeec
Q 044926 299 ------DKKPLKLAKPVHLVTAGAPPPAAVLLRTE-----SLGF---KV---------------SHGYGLTETGGIVVSC 349 (569)
Q Consensus 299 ------~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-----~~~~---~i---------------~~~YG~tE~~~~~~~~ 349 (569)
+.....++++|.+++....++.+...... ..|. ++ ...=+++|.+......
T Consensus 385 a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~ 464 (1363)
T KOG3628|consen 385 ATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRR 464 (1363)
T ss_pred cccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccC
Confidence 12223456999999999999987765443 1221 11 1111233443332222
Q ss_pred cccc---------------ccc---cCcH-HHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCceeEEEEecCcccc
Q 044926 350 AWKR---------------NWN---LLPA-AEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIML 410 (569)
Q Consensus 350 ~~~~---------------~~~---~~~~-~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~Gel~v~~~~~~~ 410 (569)
+... ... .... .......-.+|...++...+.++++++...|..+ ++|||||.+++...
T Consensus 465 p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~~ 542 (1363)
T KOG3628|consen 465 PEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLGK 542 (1363)
T ss_pred cccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCccc
Confidence 2100 000 0001 1111122244666666668899999999999998 99999999999999
Q ss_pred cccCCccccccccC------------CCCeeeecceEEEecCCcEEEeccCCCeEE-eCceeeeHHHHH----------H
Q 044926 411 GYLKDPIGTRKCMT------------DDGWFYTGDVGVMHSDGYLEIKDRSKDVII-SGGENLSSVEVE----------S 467 (569)
Q Consensus 411 gy~~~~~~~~~~~~------------~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~-~~G~~v~~~~iE----------~ 467 (569)
+|+.-+..+...|. +..+.|||-+|++++++ ++++|-.+|.+. ..|..++..+|- .
T Consensus 543 ~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gk-i~vl~~k~d~llq~~~~~h~~d~iv~thya~~~ikt 621 (1363)
T KOG3628|consen 543 LFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGK-IYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKT 621 (1363)
T ss_pred ceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCe-EEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHH
Confidence 99987766666552 12378999999998554 666655555555 888887766643 4
Q ss_pred HHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCC-Ccc-cc--EEEEecccCCCCCCccc
Q 044926 468 VLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPH-YMV-PK--TVVFMDELPKTSTGKIQ 543 (569)
Q Consensus 468 ~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~-~~~-p~--~~~~~~~iP~t~~GKi~ 543 (569)
+.+..+.|.++.++- .++++++++-.+.... .+.-+....+-+.+.. |++ +- .++..+.||||+-|-|.
T Consensus 622 V~R~v~~VF~~saf~------~E~~~Vv~~esP~a~e-~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~ 694 (1363)
T KOG3628|consen 622 VMRGVIAVFDVSAFE------DEHIVVVVLESPDATE-ENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIH 694 (1363)
T ss_pred HHhccceEEEEeeee------cceEEEEEEeCcchhh-hhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccc
Confidence 444567788888775 2445555554444321 1111111112122222 222 21 23334789999988899
Q ss_pred HHHHHHHHHhcCCCCCc
Q 044926 544 KFVLREIAENMGSSSSP 560 (569)
Q Consensus 544 r~~l~~~~~~~~~~~~~ 560 (569)
-.++++.|.+.....+-
T Consensus 695 ~~~~k~~F~~G~L~~~~ 711 (1363)
T KOG3628|consen 695 NNECKQAFLEGSLPPSY 711 (1363)
T ss_pred cHHHHHHHHcCCCCcce
Confidence 99999999998876653
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.80 E-value=1.7e-17 Score=164.67 Aligned_cols=256 Identities=14% Similarity=0.080 Sum_probs=166.1
Q ss_pred CceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEec-CchhhhhhhHHHHHHHhCceEEEeccCC
Q 044926 191 DPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTL-PMFHSNGWCFPWAMAAVGGTNICIRKFD 266 (569)
Q Consensus 191 ~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~-pl~~~~g~~~~~~~~~~g~~~~~~~~~~ 266 (569)
....+..||||||.|-.+..+.+....+....... .++..++++.... .-.+.+.. +..........-+. .+
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~-~~ 175 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLL-AP 175 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHHHH---HHhccceeeecCCC-cC
Confidence 35567889999999999999998765443322221 1455556554442 11111111 00000000111112 46
Q ss_pred HHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCcHHHHHHHH-hcCCeeeecccccccccc
Q 044926 267 ASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTE-SLGFKVSHGYGLTETGGI 345 (569)
Q Consensus 267 ~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~-~~~~~i~~~YG~tE~~~~ 345 (569)
.+.+++.|++++|+++.++|+.+..|+++......+. .++.++++||.+++..++.++ .+|++|++.||+|| |.+
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~---~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~l 251 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTI---KPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFL 251 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCC---CceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hhe
Confidence 8899999999999999999999999999765544332 789999999999999998888 67999999999999 666
Q ss_pred eeecccccccccCcHHHHhhhhcccCcccccceeeE--EeCCCCCcccCCCCCceeEEEEecCcccccccCCcccccccc
Q 044926 346 VVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVD--VLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCM 423 (569)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--i~d~~~~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 423 (569)
+..|.. .+++...+. ..++ ++|++ +. +..++++ ..+..+
T Consensus 252 a~eC~~-g~lHl~ed~----------------~~vE~~ivD~~-~~---------~~~ViT~------------L~n~~~ 292 (430)
T TIGR02304 252 ASTCRC-GTLHLNEDL----------------VHIEKQYLDEH-KR---------FVPIITD------------FTRTTQ 292 (430)
T ss_pred EEecCC-CCEEEcccc----------------EEEEeeEECCC-Cc---------eEEEEec------------CCCccc
Confidence 666642 223322111 1344 78864 21 4456665 111112
Q ss_pred CCCCeeeecceEEEecC----Cc----E-EEeccCCCeEEe---Cce--eeeHHHHHHH-HHcCCCcceeEEEecCCCCC
Q 044926 424 TDDGWFYTGDVGVMHSD----GY----L-EIKDRSKDVIIS---GGE--NLSSVEVESV-LYSNPAVNEAAVVARPDEFW 488 (569)
Q Consensus 424 ~~~~~~~TGD~~~~~~d----g~----l-~~~GR~~~~i~~---~G~--~v~~~~iE~~-l~~~~~i~~~~v~~~~~~~~ 488 (569)
+ --.|+|||++.+.++ |. + .+.||.+|+++. +|. .++|..++.. +...++|.+..+++...
T Consensus 293 P-lIRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~--- 368 (430)
T TIGR02304 293 P-IVRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGS--- 368 (430)
T ss_pred e-EEeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccC---
Confidence 1 235999999988644 32 3 388999999984 454 4599999887 44578999998887543
Q ss_pred CceeEEEEEe
Q 044926 489 GETPCAFVSL 498 (569)
Q Consensus 489 ~~~~~~~v~~ 498 (569)
..+.+.++.
T Consensus 369 -~~l~v~~~~ 377 (430)
T TIGR02304 369 -AQLELIADC 377 (430)
T ss_pred -CeEEEEEEe
Confidence 334455544
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.28 E-value=4.5e-12 Score=93.52 Aligned_cols=70 Identities=56% Similarity=0.855 Sum_probs=61.3
Q ss_pred HHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccc--cEEEEecc-cCCCCCC
Q 044926 464 EVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVP--KTVVFMDE-LPKTSTG 540 (569)
Q Consensus 464 ~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~~~~~~-iP~t~~G 540 (569)
|||++|.++|+|.+|+|++.+++.+|+.+++++++ +.++|+++++++|+.|++| ..++.+++ ||+|++|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~--------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~G 72 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL--------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSG 72 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE--------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe--------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCC
Confidence 79999999999999999999999889999999998 3389999999999999999 55555577 9999999
Q ss_pred c
Q 044926 541 K 541 (569)
Q Consensus 541 K 541 (569)
|
T Consensus 73 K 73 (73)
T PF13193_consen 73 K 73 (73)
T ss_dssp S
T ss_pred C
Confidence 8
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.95 E-value=6.3e-08 Score=94.48 Aligned_cols=226 Identities=18% Similarity=0.213 Sum_probs=133.4
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccC----CCCCCC-EEEEecCchhh-hhhhH----HHHHHHhCce
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDW----SVPTQP-VYLWTLPMFHS-NGWCF----PWAMAAVGGT 258 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~----~~~~~d-~~~~~~pl~~~-~g~~~----~~~~~~~g~~ 258 (569)
++++..++.||||||.|--+.+.+..+..+...+...+ +..... .++...|-... ..+.. .......+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 45677899999999998767777666554443333322 222222 23333343211 11111 1112222333
Q ss_pred EEEec--cCCHHHHHHHHH----HhCcceeechhHHHHHHHcCCCCCCCCCCcC-CCceEEEeC------CCCcH-HHHH
Q 044926 259 NICIR--KFDASIIFDLIR----RHGVTHMCGAPVVLNMLSNYRDPDKKPLKLA-KPVHLVTAG------APPPA-AVLL 324 (569)
Q Consensus 259 ~~~~~--~~~~~~~~~~l~----~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~-~l~~~~~~g------~~l~~-~~~~ 324 (569)
..+. .++.+.+...+. +.++..+++.|.++-.++...+.....+.+. ..+.+-.|| +.++. +...
T Consensus 168 -~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 168 -FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred -eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 3333 256776666664 4578899999987776666655555555432 234444443 34554 4445
Q ss_pred HHHh-cCC----eeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcccCCCCCcee
Q 044926 325 RTES-LGF----KVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLG 399 (569)
Q Consensus 325 ~~~~-~~~----~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~~~~~G 399 (569)
.+++ +|+ .+++.||+||.......|.... .-.| + .+.|.|+++..+++.| +.|
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~----------------~~~p-~---wV~iRDp~tl~~~~~G--e~G 304 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH----------------FHVP-P---WVIIRDPETLEPLPPG--ETG 304 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCCc----------------ccCC-C---eEEEECCCCCcCCCCC--Cee
Confidence 5554 787 6999999999876555542110 0111 1 3677799999988887 899
Q ss_pred EEEEecCcccccccCCccccccccCCCCeeeecceEEEecC--------CcEEEeccCCC
Q 044926 400 EIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSD--------GYLEIKDRSKD 451 (569)
Q Consensus 400 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~d--------g~l~~~GR~~~ 451 (569)
-|-+-++... .| .+.+-|.|+|.++.+ .++.++||.+.
T Consensus 305 li~vidl~~~-s~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 305 LIQVIDLANT-SY-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEEEccccc-CC-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 9988765422 11 334789999988754 26889999874
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.50 E-value=2.4e-06 Score=88.44 Aligned_cols=177 Identities=17% Similarity=0.125 Sum_probs=96.8
Q ss_pred CCceEEEeCCCCcHHHHHHHHhc--CCe-eeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEe
Q 044926 307 KPVHLVTAGAPPPAAVLLRTESL--GFK-VSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVL 383 (569)
Q Consensus 307 ~l~~~~~~g~~l~~~~~~~~~~~--~~~-i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 383 (569)
+++.+.+.+..-......++++. +++ +..+|++||+ .+.+.. ... ...+...+...-.+.+
T Consensus 268 ~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~-~~~--------------~~~~~l~~~~~ffEFi 331 (528)
T PF03321_consen 268 NLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPL-DPE--------------DPGYVLAPDSGFFEFI 331 (528)
T ss_dssp T--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES--CC--------------C--EEE-TTSSEEEEE
T ss_pred CCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEec-CCC--------------CCceEeecCCeEEEEE
Confidence 88877766666555666666632 334 4568999995 333221 100 0111122222244444
Q ss_pred CCCCC--------cccCC---CCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEec--CC--cEEEecc
Q 044926 384 DPKSG--------VSAKR---DGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHS--DG--YLEIKDR 448 (569)
Q Consensus 384 d~~~~--------~~~~~---~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~--dg--~l~~~GR 448 (569)
+.++. ..+.. ..|+.-||++++.+ |.| .|+.||++++.. ++ .+.|+||
T Consensus 332 p~~~~~~~~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R 394 (528)
T PF03321_consen 332 PVDEDEQNPSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGR 394 (528)
T ss_dssp E-STT-------SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEE
T ss_pred eccCCcccccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEecc
Confidence 44332 11111 12377888888632 222 399999999752 23 7999999
Q ss_pred CCCeEEeCceeeeHHHHHHHHHcC-----CCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccC
Q 044926 449 SKDVIISGGENLSSVEVESVLYSN-----PAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRL 519 (569)
Q Consensus 449 ~~~~i~~~G~~v~~~~iE~~l~~~-----~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l 519 (569)
.+.++.+.|++++-.+|+++|.+. -.+.+.++............+.++++... . .+.+.+.+.+.+.|
T Consensus 395 ~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~--~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 395 RGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-P--DDLEELAKALDESL 467 (528)
T ss_dssp TTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--H--HHHHHHHHHHHHCS
T ss_pred CCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC-c--hHHHHHHHHHHHHh
Confidence 999999999999999999999874 34667777766322223445666666554 1 24556777776666
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.02 E-value=0.00028 Score=73.53 Aligned_cols=44 Identities=7% Similarity=0.171 Sum_probs=39.0
Q ss_pred eeeecceEEEec----CCcEEEeccCCCeEEeCceeeeHHHHHHHHHc
Q 044926 428 WFYTGDVGVMHS----DGYLEIKDRSKDVIISGGENLSSVEVESVLYS 471 (569)
Q Consensus 428 ~~~TGD~~~~~~----dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~ 471 (569)
.|+.||++++.. -..+.|+||.+.++...|+++.-.+++.+|.+
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 499999999853 25689999999999999999999999998887
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.87 E-value=0.0031 Score=65.19 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=38.8
Q ss_pred eeeecceEEEe----cCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcC
Q 044926 428 WFYTGDVGVMH----SDGYLEIKDRSKDVIISGGENLSSVEVESVLYSN 472 (569)
Q Consensus 428 ~~~TGD~~~~~----~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~ 472 (569)
+|+.||+.++. ....+.|++|.+.+..+.|+|.+-.++..++.+.
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 49999999874 3467999999999999999999999998888763
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.72 E-value=0.0059 Score=63.34 Aligned_cols=134 Identities=10% Similarity=0.034 Sum_probs=81.9
Q ss_pred CCceEEEeCCCCcHHHHHHHHhc--CCeeee-cccccccccceeecccccccccCcHHHHhhhhc-ccCcccccceeeEE
Q 044926 307 KPVHLVTAGAPPPAAVLLRTESL--GFKVSH-GYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKA-RQGVKTTALTEVDV 382 (569)
Q Consensus 307 ~l~~~~~~g~~l~~~~~~~~~~~--~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~i 382 (569)
+++.|.+.-..-.......++.. |++++. .|++||+..-+-..+..+ +. ......|....++.
T Consensus 294 ~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~-------------p~~~sy~L~p~~~yFEF 360 (606)
T PLN02247 294 RTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSD-------------PSDVSYTLLPNMAYFEF 360 (606)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCC-------------ccCCceeecCCcEEEEE
Confidence 77777766555555555666533 676555 899999632221111000 01 11122233335566
Q ss_pred eCCCCCc-----------------------------ccCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecc
Q 044926 383 LDPKSGV-----------------------------SAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGD 433 (569)
Q Consensus 383 ~d~~~~~-----------------------------~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 433 (569)
++.+++. .+..| +.-||+|+.-+ |. -+|+.||
T Consensus 361 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G--~~YelVvTt~~---GL--------------YRYrlGD 421 (606)
T PLN02247 361 LPVDKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVG--HYYELVVTTFT---GL--------------YRYRVGD 421 (606)
T ss_pred eecCCCcccccccccccccccccccccccCceecHHHccCC--CeEEEEEEecC---ce--------------EEEecCC
Confidence 6433321 12233 67788887511 11 1499999
Q ss_pred eEEEe----cCCcEEEeccCCCeEEeCceeeeHHHHHHHHHcC
Q 044926 434 VGVMH----SDGYLEIKDRSKDVIISGGENLSSVEVESVLYSN 472 (569)
Q Consensus 434 ~~~~~----~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~~~ 472 (569)
+.++. ....+.|++|.+.+..+.|++.+-.++..++.+.
T Consensus 422 vv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 422 ILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 99874 3467999999999999999999999998888763
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.58 E-value=9e-05 Score=57.58 Aligned_cols=84 Identities=24% Similarity=0.311 Sum_probs=49.2
Q ss_pred ceeeeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCC-----CCCHHHHHHHHhccCCCCccccEEEEe
Q 044926 457 GENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKS-----KPTEKEMIEYCRGRLPHYMVPKTVVFM 531 (569)
Q Consensus 457 G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~l~~~l~~~l~~~~~p~~~~~~ 531 (569)
|.+++|..||++|.++|++.....+...+....+.+.+.|+..++... ....++|.+.+++++.- .| .+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEEE
Confidence 789999999999999999994444444444446677888888876431 01124455555554422 23 45555
Q ss_pred --cccCCCCCCcccH
Q 044926 532 --DELPKTSTGKIQK 544 (569)
Q Consensus 532 --~~iP~t~~GKi~r 544 (569)
.+|||+ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 589998 688655
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.78 E-value=0.094 Score=52.09 Aligned_cols=93 Identities=18% Similarity=0.125 Sum_probs=76.7
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 39 TYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 39 ~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
.+|+.|....+..+|+.|...|..+||+|.++..-+ ..-+...+|+.++|+.++|+.+.. -+.-..++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEEE
Confidence 599999999999999999999999999998876611 111677899999999999998833 34557789999999999
Q ss_pred EccccHHHHHHHHhcC
Q 044926 117 VDFHSRALVREAVSLF 132 (569)
Q Consensus 117 ~~~~~~~~~~~~~~~~ 132 (569)
+.+...-.+.+.....
T Consensus 188 ~tps~~l~lae~~~~~ 203 (438)
T COG1541 188 ATPSYLLYLAEEAEEE 203 (438)
T ss_pred EChHHHHHHHHHHHHc
Confidence 9999887777766554
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=88.37 E-value=6.1 Score=40.60 Aligned_cols=86 Identities=10% Similarity=0.113 Sum_probs=64.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVP--ALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
..+|.+++...+...+..+...|+.+||++.++.+-+. ......+|+..+|+.+++... ......++++.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 35899999999988998888889999999999876543 223445778889998776543 2345678899999999
Q ss_pred EEccccHHHHH
Q 044926 116 FVDFHSRALVR 126 (569)
Q Consensus 116 i~~~~~~~~~~ 126 (569)
+......-.+.
T Consensus 181 ~~~ps~ll~La 191 (445)
T TIGR03335 181 VASVFKLLRLA 191 (445)
T ss_pred EECHHHHHHHH
Confidence 88766544333
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.16 E-value=6.5 Score=40.07 Aligned_cols=90 Identities=14% Similarity=0.110 Sum_probs=68.4
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 39 TYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVP--ALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 39 ~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
.+|..++......++..+...|+++||++........ ......+++...|+.++++++.. .+.+...|++.++++++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4788888777777788888889999999887655432 22334567888999999887654 57788999999999999
Q ss_pred EccccHHHHHHHH
Q 044926 117 VDFHSRALVREAV 129 (569)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (569)
+.+.....+.+..
T Consensus 173 ~~Ps~l~~L~~~~ 185 (422)
T TIGR02155 173 VTPSYMLNLLEEL 185 (422)
T ss_pred EcHHHHHHHHHHH
Confidence 9988776655443
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.49 E-value=40 Score=35.20 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=65.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--HHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVP--ALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
-.+|+..+...+..+...+ +++++|++...++-.- .+...+++++..|+.+++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEYL---GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHhh---CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 4689998877665554443 6789999888877533 3345578889999988765 56788999999999999999
Q ss_pred EEccccHHHHHH
Q 044926 116 FVDFHSRALVRE 127 (569)
Q Consensus 116 i~~~~~~~~~~~ 127 (569)
+..+.....+..
T Consensus 260 ~~~p~~~~~l~~ 271 (513)
T PRK07656 260 PGPPTMYNSLLQ 271 (513)
T ss_pred echHHHHHHHHc
Confidence 998876665544
No 143
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=71.33 E-value=29 Score=35.00 Aligned_cols=88 Identities=9% Similarity=0.021 Sum_probs=63.5
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK 264 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 264 (569)
.++.+|++. -....+|++++...+..++. ..+++.++++....+.. ...+...++++..|+..+.+++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~-~~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS-IEFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS-HHHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc-ceeeeeeccccccccccccccc
Confidence 455677766 13457888888766655444 45889999988887764 2334445677778888888854
Q ss_pred -CCHHHHHHHHHHhCcceeec
Q 044926 265 -FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 265 -~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+.+.+...+++.+++.++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 78899999999999999996
No 144
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=70.51 E-value=28 Score=31.88 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=43.8
Q ss_pred HHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCC
Q 044926 57 LSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQS 112 (569)
Q Consensus 57 ~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 112 (569)
...|+.++|++. ..|-. ..+...+++++..|+..+.+ ++++++++...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 555889999999 87764 34446789999999998887 69999999999988765
No 145
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=68.65 E-value=46 Score=34.77 Aligned_cols=87 Identities=15% Similarity=0.184 Sum_probs=64.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPAL-YELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|++.+...+..... ..+++++|++....+....+ +...++++..|+..+..+. .+.+.+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR-FDPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC-CCHHHHHHHHHHhCCeEEE
Confidence 36899988876666655 34788999988887754322 3334557888988887765 4889999999999999999
Q ss_pred EccccHHHHHHH
Q 044926 117 VDFHSRALVREA 128 (569)
Q Consensus 117 ~~~~~~~~~~~~ 128 (569)
+.+.....+...
T Consensus 261 ~~p~~~~~l~~~ 272 (521)
T PRK06187 261 AVPTIWQMLLKA 272 (521)
T ss_pred chHHHHHHHHcC
Confidence 988776655443
No 146
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=67.53 E-value=98 Score=32.69 Aligned_cols=99 Identities=5% Similarity=-0.010 Sum_probs=68.0
Q ss_pred cCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEeecc
Q 044926 27 YGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNTIN 95 (569)
Q Consensus 27 ~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 95 (569)
.++.+|++. ++-.+|++.+...+..... ..++.++|++..++|-. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 356666654 2246899888766554433 34678899888777643 222233566677888777665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHHHHHHH
Q 044926 96 TRLDARTVSLLLQHCQSKLVFVDFHSRALVREA 128 (569)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (569)
....++.+...+++.++..+...+.....+...
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 290 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKT 290 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHh
Confidence 557888999999999999999988876655443
No 147
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=66.26 E-value=32 Score=36.12 Aligned_cols=87 Identities=11% Similarity=-0.022 Sum_probs=66.7
Q ss_pred eEEEchHHHHHHHhhhhccC-----CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcc
Q 044926 207 GVVHCHRGIFIVAVNTLSDW-----SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVT 280 (569)
Q Consensus 207 ~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t 280 (569)
+..+|+..+...+..++..+ +++.+|++....|....+.. ..++++..|+.....+ .++..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~-~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE-LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 77899999887776666554 37889999999997654433 3456677777776664 48999999999999999
Q ss_pred eeechhHHHHHHHc
Q 044926 281 HMCGAPVVLNMLSN 294 (569)
Q Consensus 281 ~~~~~P~~l~~l~~ 294 (569)
++++....+..+.+
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998777776643
No 148
>PLN02736 long-chain acyl-CoA synthetase
Probab=66.25 E-value=63 Score=35.17 Aligned_cols=86 Identities=10% Similarity=-0.041 Sum_probs=63.7
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|.+.+...+..++. ..++.++|++....+....+. ...++++..|+..+.++ ..+++.+...+++.++..++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 45798888776665554 458999999988877544322 23456667788777664 47899999999999999999
Q ss_pred chhHHHHHHHc
Q 044926 284 GAPVVLNMLSN 294 (569)
Q Consensus 284 ~~P~~l~~l~~ 294 (569)
+.+..+..+.+
T Consensus 156 ~~~~~~~~~~~ 166 (651)
T PLN02736 156 CVPQTLNTLLS 166 (651)
T ss_pred ECHHHHHHHHH
Confidence 98877766544
No 149
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=64.35 E-value=97 Score=31.62 Aligned_cols=93 Identities=10% Similarity=0.035 Sum_probs=70.0
Q ss_pred cCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhccceEeecc
Q 044926 27 YGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPN--VPALYELHFAVPFAAAVLNTIN 95 (569)
Q Consensus 27 ~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~ 95 (569)
.||..+-+. .+-++|=-.+.+++..++..+ |+...+++++-.|- +.-.++..+|++..|+..|.-.
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~ 308 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPA 308 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeC
Confidence 467665554 225799999999988887766 66554444443332 4455677788999999999999
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccH
Q 044926 96 TRLDARTVSLLLQHCQSKLVFVDFHSR 122 (569)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (569)
|.+.+..+.+.+.+.+|..++..+.-.
T Consensus 309 ~~f~~k~alqai~~ekcT~l~gtPtM~ 335 (596)
T KOG1177|consen 309 PSFDPKDALQAISNEKCTTLYGTPTMF 335 (596)
T ss_pred CCCChHHHHHHHHhhceEEEecChHHH
Confidence 999999999999999999999987643
No 150
>PRK08315 AMP-binding domain protein; Validated
Probab=61.22 E-value=82 Score=33.35 Aligned_cols=84 Identities=7% Similarity=-0.007 Sum_probs=63.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPN--VPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
-.+|.+.+...+..+... .+++++|++....+- ...++..+++++..|+..+.......+..+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 468888887665554433 378999998877765 344556678888889888766667788889999999999999
Q ss_pred EEccccHHH
Q 044926 116 FVDFHSRAL 124 (569)
Q Consensus 116 i~~~~~~~~ 124 (569)
+..+.....
T Consensus 294 ~~~P~~~~~ 302 (559)
T PRK08315 294 YGVPTMFIA 302 (559)
T ss_pred ecchHHHHH
Confidence 988765543
No 151
>PRK12583 acyl-CoA synthetase; Provisional
Probab=58.52 E-value=94 Score=32.84 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=62.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPN--VPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
..+|++.+...+..+...+ +++++|++....+- ....+..+++++..|+.++..........+...+.+.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 4689998876666555444 77889988777654 345566678888889887755556778888899999999999
Q ss_pred EEccccHH
Q 044926 116 FVDFHSRA 123 (569)
Q Consensus 116 i~~~~~~~ 123 (569)
+..+....
T Consensus 296 ~~~P~~~~ 303 (558)
T PRK12583 296 YGVPTMFI 303 (558)
T ss_pred eccHHHHH
Confidence 98776543
No 152
>PLN02654 acetate-CoA ligase
Probab=57.12 E-value=88 Score=34.16 Aligned_cols=95 Identities=12% Similarity=-0.036 Sum_probs=65.1
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-c
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-K 264 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 264 (569)
++.+|++..... .+ ....+|.+.+...+..++. ..+++++|++...+|..... ....+++...|+..+.+. .
T Consensus 103 ~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~~~ 178 (666)
T PLN02654 103 GDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVFAG 178 (666)
T ss_pred CCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCC
Confidence 456666542221 11 2356899998776665554 45899999999988864332 223456667777776664 5
Q ss_pred CCHHHHHHHHHHhCcceeechhH
Q 044926 265 FDASIIFDLIRRHGVTHMCGAPV 287 (569)
Q Consensus 265 ~~~~~~~~~l~~~~~t~~~~~P~ 287 (569)
+..+.+...++..++..+++...
T Consensus 179 ~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 179 FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 88999999999999999987654
No 153
>PRK09274 peptide synthase; Provisional
Probab=56.95 E-value=68 Score=33.91 Aligned_cols=97 Identities=5% Similarity=-0.086 Sum_probs=63.5
Q ss_pred CCCceEEEecCCCC-CCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc
Q 044926 189 EWDPIVLNYTSGTT-MSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK 264 (569)
Q Consensus 189 ~~~~a~i~~TSGtT-G~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 264 (569)
++.++++....+++ ...+...+|.+++...+..++. ..++.++|++....+....+ ....++++..|+..+.+++
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEcCC
Confidence 34566654332221 1223336898888766655544 35789999998888754332 2334666777887777654
Q ss_pred -CCHHHHHHHHHHhCcceeechh
Q 044926 265 -FDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 265 -~~~~~~~~~l~~~~~t~~~~~P 286 (569)
...+.+...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 6788899999999999888754
No 154
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=56.61 E-value=49 Score=32.84 Aligned_cols=66 Identities=18% Similarity=0.154 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC-----CCHHHHHHHHhhcCCeEEEEc
Q 044926 49 CLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR-----LDARTVSLLLQHCQSKLVFVD 118 (569)
Q Consensus 49 v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (569)
...+...|+..++++||-|.+- +.-|+...=++...|+.+|.+|-+ .+++.+...+... .++||.-
T Consensus 59 T~AL~laL~al~ig~GDeVI~p---s~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIVP---SFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEec---CCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 3455555666689999966553 456788888899999999999764 5788888888765 7888764
No 155
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=55.88 E-value=98 Score=32.27 Aligned_cols=86 Identities=12% Similarity=-0.036 Sum_probs=65.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA-LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
..+|...+...+..+...+ +++++|++...++-.-. .+..+++++..|+..+.. +....+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4689998887777666544 57889999888876432 344567888899988865 557888999999999999999
Q ss_pred EccccHHHHHH
Q 044926 117 VDFHSRALVRE 127 (569)
Q Consensus 117 ~~~~~~~~~~~ 127 (569)
..+.....+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 99877665543
No 156
>PLN03102 acyl-activating enzyme; Provisional
Probab=55.52 E-value=78 Score=33.82 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=59.3
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|.+++...+..+... .++..+|++....|..-. -....++++..|+..+.++ ..+.+.+...+++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 58888887766665554 478999999888885332 2223456677777777665 478999999999999999998
Q ss_pred hhHHHH
Q 044926 285 APVVLN 290 (569)
Q Consensus 285 ~P~~l~ 290 (569)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 765543
No 157
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=54.94 E-value=1.5e+02 Score=28.22 Aligned_cols=91 Identities=22% Similarity=0.211 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCC----CHHHHHHHHhhcCCeEEEEccc-c
Q 044926 47 HRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRL----DARTVSLLLQHCQSKLVFVDFH-S 121 (569)
Q Consensus 47 ~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~ii~~~~-~ 121 (569)
.|...+|..|++. |..|.+++.+....+...+ ...|..+..++-.. ..+++..++++.+++++|+|.- .
T Consensus 18 ~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~~i--~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQ----GAEVAFACKPLPGDLIDLL--LSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHH--HHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4678899999765 4457777777655544333 46676666664332 3557889999999999999974 2
Q ss_pred HHHHHHHHhcCCCCCCCCCEEEEeCCC
Q 044926 122 RALVREAVSLFPPDLKPPPLVLISDDD 148 (569)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (569)
...+.+..+.. .++++++++..
T Consensus 92 ~~~~~~~~k~~-----~~~l~~iDD~~ 113 (279)
T TIGR03590 92 DADWEKLIKEF-----GRKILVIDDLA 113 (279)
T ss_pred CHHHHHHHHHh-----CCeEEEEecCC
Confidence 33333333321 35777777653
No 158
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=53.50 E-value=1.1e+02 Score=33.31 Aligned_cols=92 Identities=14% Similarity=0.031 Sum_probs=63.8
Q ss_pred CCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cC
Q 044926 190 WDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KF 265 (569)
Q Consensus 190 ~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~ 265 (569)
++++++.... +|. ...+|.+.+...+..++. ..++.++|++...+|..... ....+++...|+..+.+. .+
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCCC
Confidence 3566555422 222 356899988766655554 45899999999999875333 233466677777776664 47
Q ss_pred CHHHHHHHHHHhCcceeechh
Q 044926 266 DASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 266 ~~~~~~~~l~~~~~t~~~~~P 286 (569)
..+.+...+++.++..+++..
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEcc
Confidence 889999999999999988754
No 159
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=53.29 E-value=1.3e+02 Score=30.01 Aligned_cols=90 Identities=17% Similarity=0.073 Sum_probs=67.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhccceEeeccCCCC--HHHHHHHHhhcCCeE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA-LYELHFAVPFAAAVLNTINTRLD--ARTVSLLLQHCQSKL 114 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~ 114 (569)
..+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..+.... ...+..++++.++..
T Consensus 138 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 214 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTV 214 (408)
T ss_pred EEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceE
Confidence 46888888877776665 3366788988887766433 44556777888888887766555 688899999999999
Q ss_pred EEEccccHHHHHHHHh
Q 044926 115 VFVDFHSRALVREAVS 130 (569)
Q Consensus 115 ii~~~~~~~~~~~~~~ 130 (569)
+++.+.....+.+...
T Consensus 215 l~~~p~~~~~l~~~~~ 230 (408)
T TIGR01733 215 LNLTPSLLALLAAALP 230 (408)
T ss_pred EEeCHHHHHHHHHhhh
Confidence 9999988877666543
No 160
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=52.39 E-value=1.3e+02 Score=31.93 Aligned_cols=86 Identities=7% Similarity=-0.064 Sum_probs=61.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA--LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
-.+|.+.+...+.... ...+++++|++....+.... ....+++.+..|+..+......+++.+...+++.+++++
T Consensus 223 V~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 4688888765544333 33467888977665554322 234567788899988877777889999999999999999
Q ss_pred EEccccHHHHH
Q 044926 116 FVDFHSRALVR 126 (569)
Q Consensus 116 i~~~~~~~~~~ 126 (569)
+..+.....+.
T Consensus 300 ~~~P~~~~~l~ 310 (570)
T PRK04319 300 YTAPTAIRMLM 310 (570)
T ss_pred EeCHHHHHHHH
Confidence 99887666554
No 161
>PLN02614 long-chain acyl-CoA synthetase
Probab=52.33 E-value=1.7e+02 Score=32.05 Aligned_cols=85 Identities=11% Similarity=-0.090 Sum_probs=61.3
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|.+.+...+..++. ..++.++|++....+.....- ...++++..|+..+.+. ...++.+...+++.++..++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWI-ISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 45788888766655444 458999999988888643322 23456667777777665 47889999999999999999
Q ss_pred chhHHHHHHH
Q 044926 284 GAPVVLNMLS 293 (569)
Q Consensus 284 ~~P~~l~~l~ 293 (569)
+....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 8776655543
No 162
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=52.12 E-value=1.1e+02 Score=33.01 Aligned_cols=96 Identities=14% Similarity=0.022 Sum_probs=65.9
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR- 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 263 (569)
.++.+|++.... .+| ....+|.+.+...+..++. ..++.++|++...+|....+ ....++++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCC
Confidence 455677664322 122 2456899888766655544 45899999999988864332 333456677777777664
Q ss_pred cCCHHHHHHHHHHhCcceeechhH
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAPV 287 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P~ 287 (569)
.+.++.+...++..++..+++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578899999999999999887653
No 163
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=51.91 E-value=1.2e+02 Score=32.89 Aligned_cols=93 Identities=10% Similarity=-0.028 Sum_probs=64.6
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-c
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-K 264 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~ 264 (569)
++.+|++.... .| ....+|.+.+...+..++. ..++.++|++...+|..... ....++++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET-VVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEeeCCC
Confidence 45677665332 12 2356899988766655544 35889999999988854332 333566677788777764 4
Q ss_pred CCHHHHHHHHHHhCcceeechh
Q 044926 265 FDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 265 ~~~~~~~~~l~~~~~t~~~~~P 286 (569)
+..+.+...++..++..+++..
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEcc
Confidence 7889999999999999888754
No 164
>PRK07529 AMP-binding domain protein; Validated
Probab=51.76 E-value=99 Score=33.47 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=62.5
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEe-c
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICI-R 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~ 263 (569)
.++.+|++....+.. ..+...+|.+.+...+..++. ..++.++|++...+|....+ ....+++...|. .+.+ +
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 345677765433211 123457899988766655444 45889999999998865433 233455555664 3333 4
Q ss_pred cCCHHHHHHHHHHhCcceeech
Q 044926 264 KFDASIIFDLIRRHGVTHMCGA 285 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~ 285 (569)
..+++.+...+++.++..++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 4788999999999999998875
No 165
>PLN03052 acetate--CoA ligase; Provisional
Probab=51.57 E-value=1.2e+02 Score=33.45 Aligned_cols=98 Identities=12% Similarity=0.038 Sum_probs=67.0
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR- 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 263 (569)
.++.+|++.-..+..+.+ ...+|.+.+...+..++. ..++.++|++...+|..-.+ ....+++...|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~-via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA-VIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHcCCEEEeeCC
Confidence 345677665433322222 355899888766655544 45899999999999864333 233456667777777664
Q ss_pred cCCHHHHHHHHHHhCcceeechhH
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAPV 287 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P~ 287 (569)
.+.++.+...++..++..+++...
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 588999999999999999887653
No 166
>PLN02565 cysteine synthase
Probab=51.13 E-value=1.8e+02 Score=28.33 Aligned_cols=81 Identities=14% Similarity=0.052 Sum_probs=53.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
.+-||++ +-+..+-..+.+.|. .+|....+....+-.-+..-++|..+|..+..+-|...+......++..++++++
T Consensus 41 PtGSfKd--R~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~ 118 (322)
T PLN02565 41 PCSSVKD--RIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVL 118 (322)
T ss_pred CccchHH--HHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEE
Confidence 3445554 234444445555564 6775544444444444455567777898888777777777888899999999999
Q ss_pred Eccc
Q 044926 117 VDFH 120 (569)
Q Consensus 117 ~~~~ 120 (569)
+++.
T Consensus 119 ~~~~ 122 (322)
T PLN02565 119 TDPA 122 (322)
T ss_pred eCCC
Confidence 9864
No 167
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=51.04 E-value=1.2e+02 Score=32.86 Aligned_cols=94 Identities=7% Similarity=-0.010 Sum_probs=64.9
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEe-cc
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICI-RK 264 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~~ 264 (569)
++.+|++....+. + ....+|.+.+...+..++. .+++.++|++...+|..-..- ...+++...|+..+.+ +.
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL-IAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCCC
Confidence 4456665432211 1 2356899998766655554 458999999999998654332 2345666677776666 45
Q ss_pred CCHHHHHHHHHHhCcceeechh
Q 044926 265 FDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 265 ~~~~~~~~~l~~~~~t~~~~~P 286 (569)
+.++.+...|++.++..+++..
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 8899999999999999998754
No 168
>PLN02246 4-coumarate--CoA ligase
Probab=51.03 E-value=1.1e+02 Score=32.23 Aligned_cols=84 Identities=10% Similarity=0.061 Sum_probs=59.0
Q ss_pred EEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|+..+...+..+... .++.++|++....+-.. ......++++..|+..+.+++ .....+...++..++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 358999887666555543 47899999988876542 222334566677777776654 6788899999999999888
Q ss_pred chhHHHHHH
Q 044926 284 GAPVVLNML 292 (569)
Q Consensus 284 ~~P~~l~~l 292 (569)
........+
T Consensus 128 ~~~~~~~~~ 136 (537)
T PLN02246 128 TQSCYVDKL 136 (537)
T ss_pred EccchHHHH
Confidence 766554433
No 169
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=50.94 E-value=1e+02 Score=32.51 Aligned_cols=94 Identities=10% Similarity=-0.031 Sum_probs=64.2
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK- 264 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~- 264 (569)
++.+|++..-. +.++...+|...+...+..+... .++.++|++....+..... ....++++..|+..+.+++
T Consensus 38 p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~ 113 (547)
T PRK13295 38 PDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPI 113 (547)
T ss_pred CCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccc
Confidence 44566654322 22344578999887766555543 4789999998888754433 3345667777888776654
Q ss_pred CCHHHHHHHHHHhCcceeechh
Q 044926 265 FDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 265 ~~~~~~~~~l~~~~~t~~~~~P 286 (569)
...+.+...++..++..+++..
T Consensus 114 ~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 114 FRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred cCHHHHHHHHHhcCceEEEEec
Confidence 6788899999999999887654
No 170
>PRK06839 acyl-CoA synthetase; Validated
Probab=50.27 E-value=1.4e+02 Score=30.83 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=61.5
Q ss_pred EEEchHHHHHHHhhhhcc----CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCccee
Q 044926 208 VVHCHRGIFIVAVNTLSD----WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHM 282 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~----~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~ 282 (569)
..+|+..+...+..+... .++.+++++....+-... .....++++..|+..+.++. .++..+...+++.+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i 104 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVL 104 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEE
Confidence 568999887766665543 468899998887776533 22334566677777776654 688889999999999999
Q ss_pred echhHHHHHHH
Q 044926 283 CGAPVVLNMLS 293 (569)
Q Consensus 283 ~~~P~~l~~l~ 293 (569)
+..+.....+.
T Consensus 105 ~~~~~~~~~~~ 115 (496)
T PRK06839 105 FVEKTFQNMAL 115 (496)
T ss_pred EEcHHHHHHHH
Confidence 98877665443
No 171
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=49.98 E-value=1.3e+02 Score=32.69 Aligned_cols=95 Identities=14% Similarity=0.040 Sum_probs=65.5
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR- 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 263 (569)
.++.+|++..... ......+|.+++...+..++.. .++.++|++....|....+ ....++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCC
Confidence 3556777643211 1135678999987766655544 5789999999888754332 233456677787777665
Q ss_pred cCCHHHHHHHHHHhCcceeechh
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P 286 (569)
.+.++.+...++..++..+++..
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcC
Confidence 47889999999999999988754
No 172
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=49.93 E-value=1.4e+02 Score=32.80 Aligned_cols=88 Identities=10% Similarity=-0.118 Sum_probs=64.9
Q ss_pred eEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCccee
Q 044926 207 GVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHM 282 (569)
Q Consensus 207 ~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~ 282 (569)
-..+|.+.+...+..++. .+++.++|++....+-....- ...++++..|+..+.+. ...++.+...|++.++..+
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWL-IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 356788888776666554 458899999988877543322 23456667777777665 4789999999999999999
Q ss_pred echhHHHHHHHcC
Q 044926 283 CGAPVVLNMLSNY 295 (569)
Q Consensus 283 ~~~P~~l~~l~~~ 295 (569)
++....+..+.+.
T Consensus 183 i~~~~~~~~l~~~ 195 (696)
T PLN02387 183 ICDSKQLKKLIDI 195 (696)
T ss_pred EECHHHHHHHHHH
Confidence 9988887777654
No 173
>PRK08316 acyl-CoA synthetase; Validated
Probab=49.89 E-value=1.1e+02 Score=31.79 Aligned_cols=85 Identities=7% Similarity=-0.060 Sum_probs=61.3
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|...+...+..++. ..++.++|++....|.... .+...++++..|+..+.++. .+.+.+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 56788888766555444 3478899999887775443 33345677778877777754 6788899999999999998
Q ss_pred chhHHHHHHH
Q 044926 284 GAPVVLNMLS 293 (569)
Q Consensus 284 ~~P~~l~~l~ 293 (569)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 174
>PRK07788 acyl-CoA synthetase; Validated
Probab=49.45 E-value=88 Score=33.06 Aligned_cols=83 Identities=12% Similarity=0.025 Sum_probs=61.0
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|.+.+...+..++.. .++.++|++....+-.- .-....++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 58888887666555443 47889999988776432 222335677778888887765 78889999999999999998
Q ss_pred hhHHHHHH
Q 044926 285 APVVLNML 292 (569)
Q Consensus 285 ~P~~l~~l 292 (569)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766554
No 175
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=48.60 E-value=1.3e+02 Score=30.91 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=62.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA-LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|++.+...+..... ..+++++|++....|-.-. .+..+++.+..|+.++..+ ..+..++...+++.++..+.
T Consensus 159 v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGSAL---NLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHHHH---hcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 36888877665433332 3588999999888875322 2334567777898887664 67889999999999999999
Q ss_pred EccccHHHHHH
Q 044926 117 VDFHSRALVRE 127 (569)
Q Consensus 117 ~~~~~~~~~~~ 127 (569)
..+.....+.+
T Consensus 235 ~~P~~~~~l~~ 245 (483)
T PRK03640 235 VVSTMLQRLLE 245 (483)
T ss_pred eHHHHHHHHHh
Confidence 99887765543
No 176
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=47.80 E-value=2.5e+02 Score=31.16 Aligned_cols=116 Identities=13% Similarity=0.139 Sum_probs=74.7
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc------CCCCCC-----------CEEEEecCchhhhhhhHHHH
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD------WSVPTQ-----------PVYLWTLPMFHSNGWCFPWA 251 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~------~~~~~~-----------d~~~~~~pl~~~~g~~~~~~ 251 (569)
++.+|++....|. + ...+|.+.+...+..++.. .|+.++ |++....+...-. +...++
T Consensus 75 p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew-~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW-LVADLA 149 (746)
T ss_pred CCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH-HHHHHH
Confidence 4566765432221 1 2467888887666554432 367777 7887777653222 123466
Q ss_pred HHHhCceEEEec-cCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC
Q 044926 252 MAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG 315 (569)
Q Consensus 252 ~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g 315 (569)
++..|+..+.+. .+.++.+...|++.++.++++.+..+..+.+... .++ .++.+++-+
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~--~l~~ii~~~ 208 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELP--HLKKLIILD 208 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCC--CceEEEEEC
Confidence 677788877774 5889999999999999999998888877765321 222 556665543
No 177
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=47.46 E-value=83 Score=31.92 Aligned_cols=83 Identities=8% Similarity=0.053 Sum_probs=61.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-HHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVP-ALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
..+|++.+...+..++..+ +++++|++....+-.. ..+..+++++..|+..+..++. +.+...+++.++..+.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 4789999988777766554 7889999888776532 2233567888889988877543 3788889999999999
Q ss_pred EccccHHHHH
Q 044926 117 VDFHSRALVR 126 (569)
Q Consensus 117 ~~~~~~~~~~ 126 (569)
..+.....+.
T Consensus 203 ~~P~~l~~l~ 212 (436)
T TIGR01923 203 LVPTQLNRLL 212 (436)
T ss_pred eHHHHHHHHH
Confidence 9877655443
No 178
>PRK06188 acyl-CoA synthetase; Validated
Probab=47.39 E-value=1.8e+02 Score=30.50 Aligned_cols=86 Identities=7% Similarity=-0.032 Sum_probs=63.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFV 117 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (569)
..+|+..+...+.... ...+++.+|++....+-.-.+...+++.+..|+..+..+ ...+..+...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 4588888776555433 334778899988888776555556677778888887664 567888999999999999999
Q ss_pred ccccHHHHHH
Q 044926 118 DFHSRALVRE 127 (569)
Q Consensus 118 ~~~~~~~~~~ 127 (569)
.+.....+.+
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 8776655443
No 179
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=47.10 E-value=67 Score=31.91 Aligned_cols=65 Identities=18% Similarity=0.232 Sum_probs=44.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC-----CCHHHHHHHHhhcCCeEEEEcc
Q 044926 51 QLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR-----LDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 51 ~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
.+-..|...|+++||.|++-.-. +....-|+..+|+.+|++|.+ .+.+.+...+.. +.++|+...
T Consensus 52 Al~~al~~l~~~~gdeVi~p~~t---~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~h 121 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPAYT---FPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITP-KTKAILVVH 121 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEESSS----THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE-
T ss_pred HHHHHHHhcCCCcCceEecCCCc---chHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEec
Confidence 44445556789999999987555 456667888899999998775 567888887764 458887754
No 180
>PRK13388 acyl-CoA synthetase; Provisional
Probab=46.48 E-value=1.5e+02 Score=31.23 Aligned_cols=83 Identities=12% Similarity=-0.042 Sum_probs=59.4
Q ss_pred EEchHHHHHHHhhhhcc---CCC-CCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 209 VHCHRGIFIVAVNTLSD---WSV-PTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~-~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
.+|+..+...+..++.. .++ ..+|++....+..... ....++++..|+..+.+++ ...+.+...+++.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 67999987777665554 467 6889988888754332 2234566777877776654 6788999999999999998
Q ss_pred chhHHHHHH
Q 044926 284 GAPVVLNML 292 (569)
Q Consensus 284 ~~P~~l~~l 292 (569)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876654433
No 181
>PLN03051 acyl-activating enzyme; Provisional
Probab=46.43 E-value=1.2e+02 Score=31.55 Aligned_cols=85 Identities=13% Similarity=-0.062 Sum_probs=58.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA-LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|.+.+...+.... ...++.++|++....+-+-. .+..+++++..|+..+..+.....+.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 4678777655443322 23477888987665553211 1235677788899888776556678899999999999999
Q ss_pred EccccHHHH
Q 044926 117 VDFHSRALV 125 (569)
Q Consensus 117 ~~~~~~~~~ 125 (569)
.-+.....+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 987766554
No 182
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=46.38 E-value=2e+02 Score=26.92 Aligned_cols=79 Identities=11% Similarity=0.066 Sum_probs=49.8
Q ss_pred eHHHHHH-HHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhc--------cceEeeccCCC---CHHHHHHHH
Q 044926 41 TWSDTHH-RCLQLASSLLSI-GISRGHVVSVVSPNVPALYELHFAVPFA--------AAVLNTINTRL---DARTVSLLL 107 (569)
Q Consensus 41 Ty~el~~-~v~~~A~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~~--------G~~~v~l~~~~---~~~~l~~~l 107 (569)
++..+.+ -.+++.+.+.+. -+.+|++|+|...-+.+..+++..+... -..++.++... +.+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 4444444 234445556664 3578999999999999999888776442 24555666543 344456666
Q ss_pred hhcCCeEEEEcc
Q 044926 108 QHCQSKLVFVDF 119 (569)
Q Consensus 108 ~~~~~~~ii~~~ 119 (569)
++.+....+.+.
T Consensus 84 ~~lgI~~~v~~~ 95 (258)
T PRK10696 84 ESLGVPYHIEEQ 95 (258)
T ss_pred HHhCCCEEEEEe
Confidence 677766666553
No 183
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=46.32 E-value=1e+02 Score=32.47 Aligned_cols=85 Identities=11% Similarity=-0.023 Sum_probs=63.3
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|.+.+...+..+... .++.+++++....|..... +...++++..|+..+.++. ...+.+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 57888887666665553 4788999998877754433 3345677778888877754 78899999999999999998
Q ss_pred hhHHHHHHHc
Q 044926 285 APVVLNMLSN 294 (569)
Q Consensus 285 ~P~~l~~l~~ 294 (569)
.......+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877665543
No 184
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=46.19 E-value=1.7e+02 Score=31.54 Aligned_cols=95 Identities=14% Similarity=0.009 Sum_probs=64.4
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR- 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 263 (569)
.++.+|++... ..+|. .-.+|.+++...+..++. ..++.++|++...+|..-.. ....++++..|+..+.+.
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~-v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA-VFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEecCC
Confidence 34566665432 22221 345899888766655544 45899999999988864322 233466677777776664
Q ss_pred cCCHHHHHHHHHHhCcceeechh
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P 286 (569)
.+....+...|+..++..+++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 57889999999999999888753
No 185
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=45.73 E-value=1.9e+02 Score=30.61 Aligned_cols=86 Identities=13% Similarity=0.067 Sum_probs=61.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV-PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|.+.+...+..... ..++.++|++....|-. ..-+...++.+..|+..+.. +......+...+++.++.++.
T Consensus 190 V~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 265 (563)
T PLN02860 190 VTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMI 265 (563)
T ss_pred EEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEE
Confidence 46888887665544432 34778899887777643 22233456777888877765 567888999999999999999
Q ss_pred EccccHHHHHH
Q 044926 117 VDFHSRALVRE 127 (569)
Q Consensus 117 ~~~~~~~~~~~ 127 (569)
..+.....+..
T Consensus 266 ~~P~~~~~l~~ 276 (563)
T PLN02860 266 TVPAMMADLIS 276 (563)
T ss_pred eChHHHHHHHH
Confidence 98877665543
No 186
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=44.39 E-value=1.3e+02 Score=32.78 Aligned_cols=85 Identities=12% Similarity=-0.076 Sum_probs=61.7
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|.+.+...+..++. ..++.++|++....+....+ +...++++..|+..+.+. ....+.+...+++.+++.++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 45899888776665554 35799999998888754332 223456677777777665 47889999999999999999
Q ss_pred chhHHHHHHH
Q 044926 284 GAPVVLNMLS 293 (569)
Q Consensus 284 ~~P~~l~~l~ 293 (569)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8766655543
No 187
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=44.06 E-value=62 Score=26.85 Aligned_cols=43 Identities=9% Similarity=0.030 Sum_probs=33.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---chHHHHHHHHhhhccceEe
Q 044926 50 LQLASSLLSIGISRGHVVSVVSPN---VPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 50 ~~~A~~L~~~g~~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~~v 92 (569)
..++..|.+.|+.+++.|.+++.. ......+++++-.+|.--|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 478888999999999999999975 5555666677777885533
No 188
>PRK08308 acyl-CoA synthetase; Validated
Probab=43.94 E-value=2.8e+02 Score=27.91 Aligned_cols=85 Identities=11% Similarity=0.107 Sum_probs=62.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
..+|++.+...+..+...+ ++..+|++...+|-. ..++..+++.+..|+..+..+ ...+..+...+++.++..+
T Consensus 119 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 4689998887666655443 567788887777654 334556788888998877664 4667788888999999999
Q ss_pred EEccccHHHHH
Q 044926 116 FVDFHSRALVR 126 (569)
Q Consensus 116 i~~~~~~~~~~ 126 (569)
+..+.....+.
T Consensus 195 ~~~P~~~~~l~ 205 (414)
T PRK08308 195 YAVPLMLHILG 205 (414)
T ss_pred EcCHHHHHHHH
Confidence 88877665544
No 189
>PRK05857 acyl-CoA synthetase; Validated
Probab=43.63 E-value=1.3e+02 Score=31.69 Aligned_cols=80 Identities=14% Similarity=-0.021 Sum_probs=58.4
Q ss_pred EEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|.+.+...+..++.. .++.+++++....+....+ +...++++..|+..+.++. ...+.+...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 458999987766666554 4788999998888754332 2335666777877777754 7788899999999999888
Q ss_pred chhHH
Q 044926 284 GAPVV 288 (569)
Q Consensus 284 ~~P~~ 288 (569)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 77654
No 190
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=43.14 E-value=1.2e+02 Score=31.91 Aligned_cols=95 Identities=12% Similarity=0.017 Sum_probs=64.4
Q ss_pred CCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-
Q 044926 189 EWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK- 264 (569)
Q Consensus 189 ~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~- 264 (569)
++.++++....| ..+|+.++...+..+.. ..++.++|++....+-...+- ...++++..|+..+.++.
T Consensus 42 p~~~a~~~~~~~-------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~ 113 (546)
T PLN02330 42 ADKVAFVEAVTG-------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANPT 113 (546)
T ss_pred CCccEEEecCCC-------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCcc
Confidence 456666532222 35889888766655554 347889999988876544322 335677778887776654
Q ss_pred CCHHHHHHHHHHhCcceeechhHHHHH
Q 044926 265 FDASIIFDLIRRHGVTHMCGAPVVLNM 291 (569)
Q Consensus 265 ~~~~~~~~~l~~~~~t~~~~~P~~l~~ 291 (569)
.....+...+++.++..++..+..+..
T Consensus 114 ~~~~~l~~~l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 114 ALESEIKKQAEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred CCHHHHHHHHHhcCCeEEEEccchhhh
Confidence 577889999999999988876655443
No 191
>PRK06381 threonine synthase; Validated
Probab=43.06 E-value=2.4e+02 Score=27.39 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=64.3
Q ss_pred CCCCCCCCCchHHHHHHHHHHcC-CCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Q 044926 6 PSPANSTPLTPLVFLERAATVYG-DSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p-~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~l 82 (569)
++.-.....|..-.+.+.....+ .++.+-..+ .+=||++ +.+..+...+.+.|. +.|. ....+-.-+.+-+
T Consensus 7 ~~~~~~~g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~lv-~aSsGN~g~alA~ 80 (319)
T PRK06381 7 SSEEKPPGGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGIT-VGTCGNYGASIAY 80 (319)
T ss_pred ccccccCCCCceeEhHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEEE-EeCCcHHHHHHHH
Confidence 33333333444444444444444 356665544 3445554 223333344455552 3443 3445555555567
Q ss_pred HhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHH
Q 044926 83 AVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRAL 124 (569)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (569)
+|...|.-+..+-|...+......++..++++++++.+..+.
T Consensus 81 ~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~~~ 122 (319)
T PRK06381 81 FARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYEEA 122 (319)
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHHHH
Confidence 778888877766665555566678999999999998764433
No 192
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=42.91 E-value=2e+02 Score=24.04 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHc---CCCCCCEEE-EEcCCchHHHHHH-HHhhhccceEeeccCCC-------CHHHHHHHHhhcC
Q 044926 44 DTHHRCLQLASSLLSI---GISRGHVVS-VVSPNVPALYELH-FAVPFAAAVLNTINTRL-------DARTVSLLLQHCQ 111 (569)
Q Consensus 44 el~~~v~~~A~~L~~~---g~~~gd~V~-i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~ 111 (569)
.+.+.+..+-....+. ..-.|..|+ ++..+|...-+.+ .|+.++|+.++.+++.. +..+...+|...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3444444444444432 233455555 5677788877777 88999999999998653 466778888888
Q ss_pred CeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCC
Q 044926 112 SKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDD 147 (569)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (569)
++++++-......+.+..... ..+++-..+.
T Consensus 95 ~D~iv~R~~~~~~~~~~a~~~-----~vPVINa~~~ 125 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAEHS-----SVPVINAGDD 125 (142)
T ss_dssp CSEEEEEESSHHHHHHHHHHC-----SSEEEEEEES
T ss_pred hheEEEEeccchHHHHHHHhc-----cCCeEcCcCC
Confidence 888888766666666665443 2455555543
No 193
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.90 E-value=1.5e+02 Score=31.37 Aligned_cols=82 Identities=6% Similarity=-0.050 Sum_probs=59.3
Q ss_pred EEEchHHHHHHHhhhhcc----CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCccee
Q 044926 208 VVHCHRGIFIVAVNTLSD----WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHM 282 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~----~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~ 282 (569)
..+|+..+...+..+... .++..+|++....|..... ....++++..|+..+.+++ +..+.+...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 357999987776666543 3788999998888754322 2335666777877777654 678899999999999999
Q ss_pred echhHHHH
Q 044926 283 CGAPVVLN 290 (569)
Q Consensus 283 ~~~P~~l~ 290 (569)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87655443
No 194
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=42.05 E-value=2.6e+02 Score=28.59 Aligned_cols=84 Identities=12% Similarity=0.074 Sum_probs=52.8
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCC
Q 044926 60 GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPP 139 (569)
Q Consensus 60 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 139 (569)
|+..|++++++..-...++-. +..........+...+.++....|++.++.++++.++....+.+..........++
T Consensus 139 g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~k 215 (430)
T TIGR02304 139 GLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKPK 215 (430)
T ss_pred ccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCce
Confidence 888999999994322222221 22333324445555778889999999999999999988776666544332223345
Q ss_pred CEEEEeC
Q 044926 140 PLVLISD 146 (569)
Q Consensus 140 ~~~~~~~ 146 (569)
.++..++
T Consensus 216 ~ii~~~E 222 (430)
T TIGR02304 216 KVISVAE 222 (430)
T ss_pred EEEEccC
Confidence 5555543
No 195
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=41.95 E-value=1.8e+02 Score=31.18 Aligned_cols=83 Identities=7% Similarity=-0.027 Sum_probs=59.0
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|+..+...+..+.. ..++.++|++....+-.... +...++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 140 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIV 140 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 4788888766555443 45788999998887654322 3345666777877776654 67788999999999999988
Q ss_pred hhHHHHHH
Q 044926 285 APVVLNML 292 (569)
Q Consensus 285 ~P~~l~~l 292 (569)
.......+
T Consensus 141 ~~~~~~~~ 148 (600)
T PRK08279 141 GEELVEAF 148 (600)
T ss_pred ChHHHHHH
Confidence 77655443
No 196
>PRK07798 acyl-CoA synthetase; Validated
Probab=40.91 E-value=2.1e+02 Score=29.81 Aligned_cols=84 Identities=2% Similarity=-0.194 Sum_probs=58.0
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhh-HHHHHHHhCceEEEecc-CCHHHHHHHHHHhCccee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWC-FPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHM 282 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~-~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~ 282 (569)
-.+|...+...+..++. ..++..+|++....+.. ..+. ..++++..|+..+.++. ...+.+...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~--~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNR--IEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 35888888666655544 35788899988776543 2233 34566667777776654 678889999999999999
Q ss_pred echhHHHHHHH
Q 044926 283 CGAPVVLNMLS 293 (569)
Q Consensus 283 ~~~P~~l~~l~ 293 (569)
+........+.
T Consensus 105 ~~~~~~~~~~~ 115 (533)
T PRK07798 105 VYEREFAPRVA 115 (533)
T ss_pred EEchhhHHHHH
Confidence 88776554443
No 197
>PLN02574 4-coumarate--CoA ligase-like
Probab=40.66 E-value=2.4e+02 Score=29.93 Aligned_cols=84 Identities=15% Similarity=0.027 Sum_probs=59.7
Q ss_pred EEchHHHHHHHhhhhc---c-CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 209 VHCHRGIFIVAVNTLS---D-WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
.+|...+...+..++. . .++.++|++....+-.. ......++++..|+..+.+++ .....+...+++.++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 4688887655544443 3 57899999988887543 222335667777887777654 6788899999999999988
Q ss_pred chhHHHHHHH
Q 044926 284 GAPVVLNMLS 293 (569)
Q Consensus 284 ~~P~~l~~l~ 293 (569)
..+..+..+.
T Consensus 145 ~~~~~~~~~~ 154 (560)
T PLN02574 145 TSPENVEKLS 154 (560)
T ss_pred ECHHHHHHHH
Confidence 8877665553
No 198
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.60 E-value=1.5e+02 Score=30.74 Aligned_cols=83 Identities=12% Similarity=-0.003 Sum_probs=59.4
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|..++...+..... ..+++.+|++....+-.. ..+...++++..|+..+.++. .....+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 4788887665555444 357889999988877543 333445677778888777754 67788899999999999988
Q ss_pred hhHHHHHH
Q 044926 285 APVVLNML 292 (569)
Q Consensus 285 ~P~~l~~l 292 (569)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 77665544
No 199
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=40.16 E-value=2.1e+02 Score=29.90 Aligned_cols=82 Identities=7% Similarity=-0.053 Sum_probs=58.7
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|..++...+..+.. ..++.++|++....+.....- ...++++..|+..+.++ ...++.+...+++.++..++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4788887666555544 458889999988877544332 23456677777777664 478899999999999999988
Q ss_pred hhHHHHH
Q 044926 285 APVVLNM 291 (569)
Q Consensus 285 ~P~~l~~ 291 (569)
.+.....
T Consensus 116 ~~~~~~~ 122 (517)
T PRK08008 116 SAQFYPM 122 (517)
T ss_pred ecchhHH
Confidence 8765543
No 200
>PRK07514 malonyl-CoA synthase; Validated
Probab=40.08 E-value=1.4e+02 Score=30.99 Aligned_cols=84 Identities=7% Similarity=-0.018 Sum_probs=60.3
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|...+...+..++. ..++.++|++....+... ......++++..|+..+.+++ .+...+...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 46888888665555444 457899999988877542 222335666778877776654 6788999999999999998
Q ss_pred chhHHHHHH
Q 044926 284 GAPVVLNML 292 (569)
Q Consensus 284 ~~P~~l~~l 292 (569)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887665543
No 201
>PRK11761 cysM cysteine synthase B; Provisional
Probab=40.02 E-value=3e+02 Score=26.37 Aligned_cols=79 Identities=11% Similarity=0.065 Sum_probs=51.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIG-ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
.+=||++ +.+..+...+.+.| +.+|+.|... ..+-.-..+-++|...|.-+..+-|...+......++..++++++
T Consensus 38 ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 114 (296)
T PRK11761 38 PAGSVKD--RPALSMIVQAEKRGEIKPGDTLIEA-TSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELIL 114 (296)
T ss_pred CCCCchh--HHHHHHHHHHHHcCCCCCCCEEEEe-CCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 4455665 33444444555555 4677766553 334444445566778888777776766666778889999999999
Q ss_pred Ecc
Q 044926 117 VDF 119 (569)
Q Consensus 117 ~~~ 119 (569)
++.
T Consensus 115 ~~~ 117 (296)
T PRK11761 115 VPK 117 (296)
T ss_pred eCC
Confidence 986
No 202
>PRK06164 acyl-CoA synthetase; Validated
Probab=39.92 E-value=2.5e+02 Score=29.52 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=64.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV-PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|...+...+..++..+ ++.+++++...+|-+ .-.+..+++.+..|+..+.. +......+...+++.++..++
T Consensus 199 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~ 274 (540)
T PRK06164 199 VLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTF 274 (540)
T ss_pred EEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeec
Confidence 4688888887776666555 678899888887763 22234567788888887765 567788899999999999999
Q ss_pred EccccHHHHHH
Q 044926 117 VDFHSRALVRE 127 (569)
Q Consensus 117 ~~~~~~~~~~~ 127 (569)
..+.....+..
T Consensus 275 ~~p~~l~~l~~ 285 (540)
T PRK06164 275 GNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHH
Confidence 98877665544
No 203
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=39.57 E-value=4e+02 Score=27.82 Aligned_cols=97 Identities=10% Similarity=-0.024 Sum_probs=66.5
Q ss_pred cCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH---HHHHhhhccceEeec
Q 044926 27 YGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYE---LHFAVPFAAAVLNTI 94 (569)
Q Consensus 27 ~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v~l 94 (569)
.++.+|++. ++..+|...+...+..... ..++.++|++....|..-.+-. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 456666653 2246888888766655433 3467889988887775433322 356777888877654
Q ss_pred cCCCCHHHHHHHHhhcCCeEEEEccccHHHHHH
Q 044926 95 NTRLDARTVSLLLQHCQSKLVFVDFHSRALVRE 127 (569)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (569)
+...+..+...+++.++.++...+.....+..
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 45677888889999999999998877655443
No 204
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=39.39 E-value=1.1e+02 Score=30.56 Aligned_cols=57 Identities=18% Similarity=0.209 Sum_probs=33.8
Q ss_pred HcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC-----CCHHHHHHHHhhcCCeEEEEc
Q 044926 58 SIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR-----LDARTVSLLLQHCQSKLVFVD 118 (569)
Q Consensus 58 ~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (569)
..++++||.|++-.+. +.....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 65 al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 65 LLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 3467788887775544 333344556668777776543 345666665543 56666654
No 205
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=39.20 E-value=2.2e+02 Score=23.56 Aligned_cols=101 Identities=14% Similarity=0.015 Sum_probs=56.4
Q ss_pred EEEEecCc-hhhhhhhHHHHH-HHhCceEEEec-cCCHHHHHHHHHHhCcceeechh------HHHHHHHcCCCCCCCCC
Q 044926 233 VYLWTLPM-FHSNGWCFPWAM-AAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAP------VVLNMLSNYRDPDKKPL 303 (569)
Q Consensus 233 ~~~~~~pl-~~~~g~~~~~~~-~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P------~~l~~l~~~~~~~~~~~ 303 (569)
+++...+- .|..|....... -..|..++... ...++.+.+.+.+++|+++..+- ..+..+.+..+... .
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~--~ 83 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG--L 83 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC--C
Confidence 33434443 677776553333 34666666665 46789999999999999876542 12233333322221 1
Q ss_pred CcCCCceEEEeCCCC-----cHHHHHHHHhcCCeeeeccccc
Q 044926 304 KLAKPVHLVTAGAPP-----PAAVLLRTESLGFKVSHGYGLT 340 (569)
Q Consensus 304 ~~~~l~~~~~~g~~l-----~~~~~~~~~~~~~~i~~~YG~t 340 (569)
. .+ .+++||... .....+.+++.|+ -..|+..
T Consensus 84 ~--~~-~i~vGG~~~~~~~~~~~~~~~l~~~G~--~~vf~~~ 120 (137)
T PRK02261 84 G--DI-LLYVGGNLVVGKHDFEEVEKKFKEMGF--DRVFPPG 120 (137)
T ss_pred C--CC-eEEEECCCCCCccChHHHHHHHHHcCC--CEEECcC
Confidence 1 33 466777653 3445566777773 3445533
No 206
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.13 E-value=1.3e+02 Score=31.89 Aligned_cols=83 Identities=11% Similarity=-0.008 Sum_probs=59.9
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|+.++...+...+. ..++..+|++....|..... +...++++..|+..+.++ ..+.+.+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 4788888766655554 34788999998887764332 233466667777777664 478899999999999999988
Q ss_pred hhHHHHHH
Q 044926 285 APVVLNML 292 (569)
Q Consensus 285 ~P~~l~~l 292 (569)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77655443
No 207
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=38.98 E-value=3.4e+02 Score=29.59 Aligned_cols=82 Identities=6% Similarity=-0.059 Sum_probs=58.9
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCccee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHM 282 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~ 282 (569)
..+|.+.+...+..++. ..++.++|++....+...- +.. .++++..|+..+.+. ...++.+...++..+++.+
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 34688888776655554 3588999999887775433 333 456667777776664 4788999999999999999
Q ss_pred echhHHHHH
Q 044926 283 CGAPVVLNM 291 (569)
Q Consensus 283 ~~~P~~l~~ 291 (569)
++....+..
T Consensus 153 ~~~~~~~~~ 161 (660)
T PLN02430 153 FVQDKKIKE 161 (660)
T ss_pred EECHHHHHH
Confidence 987654433
No 208
>PRK05850 acyl-CoA synthetase; Validated
Probab=38.98 E-value=3e+02 Score=29.26 Aligned_cols=83 Identities=7% Similarity=-0.012 Sum_probs=58.4
Q ss_pred EEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc----CCHHHHHHHHHHhCcc
Q 044926 208 VVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK----FDASIIFDLIRRHGVT 280 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t 280 (569)
..+|+..+...+..++.. .+ .++|++....+... .-....++++..|+..+.++. ...+.+...|+..++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 568998887666554443 34 57899888887543 222335666778887777753 3567899999999999
Q ss_pred eeechhHHHHHH
Q 044926 281 HMCGAPVVLNML 292 (569)
Q Consensus 281 ~~~~~P~~l~~l 292 (569)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999888766554
No 209
>PLN02550 threonine dehydratase
Probab=38.58 E-value=4.2e+02 Score=28.35 Aligned_cols=97 Identities=7% Similarity=0.002 Sum_probs=56.3
Q ss_pred HHHcCCCCeEEeCCee--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHH
Q 044926 24 ATVYGDSPSIIYNNIT--YTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDAR 101 (569)
Q Consensus 24 a~~~p~~~al~~~~~~--~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 101 (569)
.+..+.++.+-..+.+ -||++ .-..+++.+ |.+...++| .|+- ..+-.....-++|.++|..+..+-|...+.
T Consensus 119 S~~~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-VV~a--SaGNhAqgvA~aA~~lGika~IvmP~~tp~ 193 (591)
T PLN02550 119 SERLGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-VICS--SAGNHAQGVALSAQRLGCDAVIAMPVTTPE 193 (591)
T ss_pred hHhhCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-EEEE--CCCHHHHHHHHHHHHcCCCEEEEECCCCCH
Confidence 3334445555444433 34554 222333332 333334555 4443 444444445567888888777777766666
Q ss_pred HHHHHHhhcCCeEEEEccccHHHH
Q 044926 102 TVSLLLQHCQSKLVFVDFHSRALV 125 (569)
Q Consensus 102 ~l~~~l~~~~~~~ii~~~~~~~~~ 125 (569)
.....++..++++++++....+..
T Consensus 194 ~Kv~~~r~~GAeVvl~g~~~dea~ 217 (591)
T PLN02550 194 IKWQSVERLGATVVLVGDSYDEAQ 217 (591)
T ss_pred HHHHHHHHcCCEEEEeCCCHHHHH
Confidence 667788999999999987655443
No 210
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.11 E-value=1.4e+02 Score=31.42 Aligned_cols=84 Identities=7% Similarity=-0.077 Sum_probs=60.1
Q ss_pred EEchHHHHHHHhhhhcc---C-CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 209 VHCHRGIFIVAVNTLSD---W-SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~-~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
.+|+..+...+..+... . ++..++++....+... ..+...++++..|+..+.+++ .....+...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 47888886665554433 3 8889999988877532 333345666777887777654 6788999999999999998
Q ss_pred chhHHHHHHH
Q 044926 284 GAPVVLNMLS 293 (569)
Q Consensus 284 ~~P~~l~~l~ 293 (569)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8876655443
No 211
>PRK09088 acyl-CoA synthetase; Validated
Probab=37.74 E-value=2.5e+02 Score=28.98 Aligned_cols=77 Identities=10% Similarity=-0.056 Sum_probs=55.2
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|..++...+..+.. ..++..+|++....+-...+ +...++++..|+..+.+++ ..++.+...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 5798888666554443 45788999998877754432 2334666777777776654 68889999999999999877
Q ss_pred hh
Q 044926 285 AP 286 (569)
Q Consensus 285 ~P 286 (569)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 54
No 212
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=37.58 E-value=1.2e+02 Score=30.21 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=33.7
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC-----CCHHHHHHHHhhcCCeEEEEc
Q 044926 59 IGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR-----LDARTVSLLLQHCQSKLVFVD 118 (569)
Q Consensus 59 ~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (569)
.++++||.|.+-.+... ....++...|+.++.++.+ .+.+++...+.. +.++|+..
T Consensus 66 ~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 66 LDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred hCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 35678888777655543 3344556667777766532 456677766644 56666643
No 213
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=37.41 E-value=2.7e+02 Score=30.03 Aligned_cols=95 Identities=14% Similarity=0.042 Sum_probs=63.7
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR- 263 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~- 263 (569)
.++.+|++.. +..+| ..-.+|.+.+...+..++. ..++.++|++...+|..... ....++++..|+..+.+.
T Consensus 66 ~p~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIAV-STETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA-AFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEEE-cCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCC
Confidence 3456666543 22222 2346899888766555444 45899999999988864332 233456667777766664
Q ss_pred cCCHHHHHHHHHHhCcceeechh
Q 044926 264 KFDASIIFDLIRRHGVTHMCGAP 286 (569)
Q Consensus 264 ~~~~~~~~~~l~~~~~t~~~~~P 286 (569)
.+....+...|+..++..+++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 47889999999999999988754
No 214
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=37.21 E-value=56 Score=28.89 Aligned_cols=48 Identities=17% Similarity=0.378 Sum_probs=36.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhh
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPN--VPALYELHFAVP 85 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~ 85 (569)
.-+||.++.+.+.++|..+.+.|.+|.-.|++.-.- ....++-+|+.-
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~L~~~ 54 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDFLGVK 54 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHHhCCC
Confidence 468999999999999999999999998777765443 234444445443
No 215
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=37.01 E-value=1.6e+02 Score=28.74 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=46.3
Q ss_pred HHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 56 LLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 56 L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
|++.++++|++|+|..--..-.+..++|-. .|+-++-++.+....+ ...+.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~~~K~e---~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRSEEKLE---LAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCChHHHH---HHHHhCCcEEEEcC
Confidence 445688999999999888999999999853 4588777766655444 45578899999875
No 216
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.40 E-value=2.5e+02 Score=29.60 Aligned_cols=78 Identities=10% Similarity=-0.025 Sum_probs=57.3
Q ss_pred EEchHHHHHHHhhhhccC---CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSDW---SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|++.+...+..++..+ ++.++|++....|...-+ +...++++..|+..+.+++ ..+..+...++..++..++.
T Consensus 38 ~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~ 116 (534)
T COG0318 38 RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLIT 116 (534)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEE
Confidence 789999877776665543 577899998888865332 2334666778888877765 57888888899888888887
Q ss_pred hhH
Q 044926 285 APV 287 (569)
Q Consensus 285 ~P~ 287 (569)
...
T Consensus 117 ~~~ 119 (534)
T COG0318 117 SAE 119 (534)
T ss_pred ccc
Confidence 754
No 217
>PLN02479 acetate-CoA ligase
Probab=36.36 E-value=2.7e+02 Score=29.54 Aligned_cols=81 Identities=10% Similarity=0.058 Sum_probs=58.7
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|..++...+..++.. .++.++|++....+..... +...++++..|+..+.++. ...+.+...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM-YEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH-HHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 57888887666665554 4789999998888753322 2234566677777766654 67889999999999999998
Q ss_pred hhHHHH
Q 044926 285 APVVLN 290 (569)
Q Consensus 285 ~P~~l~ 290 (569)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776543
No 218
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=36.13 E-value=38 Score=19.24 Aligned_cols=22 Identities=27% Similarity=0.440 Sum_probs=17.9
Q ss_pred ccCCCCCCcccHHHHHHHHHhc
Q 044926 533 ELPKTSTGKIQKFVLREIAENM 554 (569)
Q Consensus 533 ~iP~t~~GKi~r~~l~~~~~~~ 554 (569)
.+-++.+|+|++.++++.+.++
T Consensus 8 ~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 8 EFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHCCCCCCcCCHHHHHHHHHhC
Confidence 4567889999999999988764
No 219
>PLN03013 cysteine synthase
Probab=35.83 E-value=3.9e+02 Score=27.28 Aligned_cols=80 Identities=19% Similarity=0.097 Sum_probs=51.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEE
Q 044926 39 TYTWSDTHHRCLQLASSLLSIG-ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFV 117 (569)
Q Consensus 39 ~~Ty~el~~~v~~~A~~L~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (569)
.-|+++ +.+..+-..+.+.| +++|....|....+-.-+..-++|...|..+..+-|.....+....++..+++++++
T Consensus 150 tGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v 227 (429)
T PLN03013 150 CCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLT 227 (429)
T ss_pred ccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 455655 23333333444555 477854445544444455555666778877777767667777788899999999999
Q ss_pred ccc
Q 044926 118 DFH 120 (569)
Q Consensus 118 ~~~ 120 (569)
+..
T Consensus 228 ~~~ 230 (429)
T PLN03013 228 DPA 230 (429)
T ss_pred CCC
Confidence 865
No 220
>PRK13383 acyl-CoA synthetase; Provisional
Probab=35.81 E-value=1.8e+02 Score=30.36 Aligned_cols=84 Identities=10% Similarity=0.013 Sum_probs=59.8
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|...+...+..+.. ..++.++|++....+..-. .....+++...|+..+.+++ ...+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4788887665555544 3478899999887764332 22334566777888777754 68899999999999999998
Q ss_pred hhHHHHHHH
Q 044926 285 APVVLNMLS 293 (569)
Q Consensus 285 ~P~~l~~l~ 293 (569)
.+.....+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 877665543
No 221
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=35.67 E-value=3.2e+02 Score=24.34 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=50.4
Q ss_pred CEEEEecCc-hhhhhhhHHHHHH-HhCceEEEec-cCCHHHHHHHHHHhCcceeechh------HHHHHHHcCCCCCCCC
Q 044926 232 PVYLWTLPM-FHSNGWCFPWAMA-AVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAP------VVLNMLSNYRDPDKKP 302 (569)
Q Consensus 232 d~~~~~~pl-~~~~g~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P------~~l~~l~~~~~~~~~~ 302 (569)
.+++...|- .|..|....-..+ ..|-.++... ...++.+.+.+.+.+|+++..+- ..+..+.+..+.....
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~ 163 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLR 163 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCC
Confidence 344444443 7777776644444 3555555444 46789999999999999866442 1222333332222110
Q ss_pred CCcCCCceEEEeCCCCcHHH
Q 044926 303 LKLAKPVHLVTAGAPPPAAV 322 (569)
Q Consensus 303 ~~~~~l~~~~~~g~~l~~~~ 322 (569)
.--.++.||..++...
T Consensus 164 ----~~~~i~vGG~~~~~~~ 179 (201)
T cd02070 164 ----DKVKVMVGGAPVNQEF 179 (201)
T ss_pred ----cCCeEEEECCcCCHHH
Confidence 1124788998988753
No 222
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=35.50 E-value=2.4e+02 Score=27.62 Aligned_cols=103 Identities=9% Similarity=-0.020 Sum_probs=66.1
Q ss_pred HHHHcCCCCeEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCH
Q 044926 23 AATVYGDSPSIIYNNI--TYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDA 100 (569)
Q Consensus 23 ~a~~~p~~~al~~~~~--~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (569)
..++...++.+-..+. .=+|+- .-.-+++.+ |...+-++.-.|+--..|+.+-+ -|||-++|...+-+-|...+
T Consensus 34 Ls~~~g~~v~lK~E~lQ~~gSFK~-RGA~n~i~~-Ls~e~~~~~gViaaSaGNHaQGv--A~aa~~lGi~a~IvMP~~tp 109 (347)
T COG1171 34 LSERLGAEIYLKRENLQPVGSFKI-RGAYNKLSS-LSEEEERAAGVIAASAGNHAQGV--AYAAKRLGIKATIVMPETTP 109 (347)
T ss_pred hHHhhCceEEEeeccCcccccchh-hhHHHHHHh-cChhhhhcCceEEecCCcHHHHH--HHHHHHhCCCEEEEecCCCc
Confidence 3334555666655552 333332 223333333 54222133336666677766655 48899999988888888888
Q ss_pred HHHHHHHhhcCCeEEEEccccHHHHHHHH
Q 044926 101 RTVSLLLQHCQSKLVFVDFHSRALVREAV 129 (569)
Q Consensus 101 ~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (569)
..-...++.+++.+++++..+.+....+.
T Consensus 110 ~~Kv~a~r~~GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 110 KIKVDATRGYGAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred HHHHHHHHhcCCEEEEECCCHHHHHHHHH
Confidence 88888899999999999988766555443
No 223
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=35.41 E-value=17 Score=17.37 Aligned_cols=9 Identities=67% Similarity=1.210 Sum_probs=6.7
Q ss_pred ccccccccc
Q 044926 336 GYGLTETGG 344 (569)
Q Consensus 336 ~YG~tE~~~ 344 (569)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 588888754
No 224
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=35.04 E-value=1.2e+02 Score=26.33 Aligned_cols=51 Identities=18% Similarity=0.211 Sum_probs=33.1
Q ss_pred eHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccC
Q 044926 461 SSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRL 519 (569)
Q Consensus 461 ~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l 519 (569)
-...|++.+.+.++|.++.|+...+. .++-|.+... . ...+++++.+++.+
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~~-----a~Vav~~~~~-~--~~~~~i~~~V~~~v 126 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDDN-----AYVAVDLDFN-R--FNTKKIKKKVEKAV 126 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECCE-----EEEEEEeccc-c--cchhHHHHHHHHHH
Confidence 35678899999999999999988553 3344444422 1 34455555555544
No 225
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.96 E-value=2.1e+02 Score=27.63 Aligned_cols=76 Identities=11% Similarity=0.124 Sum_probs=57.4
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCC
Q 044926 55 SLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFP 133 (569)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~ 133 (569)
-|.+.|+.+|.+|+|..--..-.+...+|.+ .|..+.-++..... -...++..+++..+...+..+....+.+..+
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~~k--keea~~~LGAd~fv~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSSKK--KEEAIKSLGADVFVDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCchh--HHHHHHhcCcceeEEecCCHHHHHHHHHhhc
Confidence 3566789999999999999999999999965 47777767665522 3456778999999998876666666665544
No 226
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=34.82 E-value=2.7e+02 Score=26.72 Aligned_cols=68 Identities=12% Similarity=-0.008 Sum_probs=44.2
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc
Q 044926 53 ASSLLSIG-ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS 121 (569)
Q Consensus 53 A~~L~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (569)
.....+.| +.+|++|.- ...+-.-..+-+++.+.|..+..+-|..........++..++++++++...
T Consensus 45 l~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 45 IWDAEKRGLLKPGKTIVE-PTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHHHcCCCCCCCEEEE-eCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 33444555 367777643 333334444445667789877777676555556888999999999998753
No 227
>PRK07638 acyl-CoA synthetase; Validated
Probab=34.78 E-value=2.8e+02 Score=28.56 Aligned_cols=86 Identities=7% Similarity=-0.011 Sum_probs=61.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH-HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA-LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|.+.+...+...+. ..+++++|++....+-... ++...+..+..|+..+.. +..++.++...+++.+++++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 46788777665554433 3467889988876655332 345556677788887755 567889999999999999999
Q ss_pred EccccHHHHHH
Q 044926 117 VDFHSRALVRE 127 (569)
Q Consensus 117 ~~~~~~~~~~~ 127 (569)
..+.....+..
T Consensus 237 ~~P~~~~~l~~ 247 (487)
T PRK07638 237 TVPTMLESLYK 247 (487)
T ss_pred eCcHHHHHHHh
Confidence 98877665543
No 228
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=34.64 E-value=3.2e+02 Score=30.18 Aligned_cols=82 Identities=12% Similarity=0.020 Sum_probs=57.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
-.+|.+.+...+..+... .++.++|++...+|-. ..+...+++.+..|+..+..+.......+...+.+.++..+
T Consensus 383 v~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~ 459 (718)
T PRK08043 383 VVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVL 459 (718)
T ss_pred EEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEE
Confidence 478988887766655433 3778999888877752 33445567888889888866544555667778888999988
Q ss_pred EEccccH
Q 044926 116 FVDFHSR 122 (569)
Q Consensus 116 i~~~~~~ 122 (569)
...+...
T Consensus 460 ~~~p~~~ 466 (718)
T PRK08043 460 FGTSTFL 466 (718)
T ss_pred EchHHHH
Confidence 8765543
No 229
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=34.35 E-value=2.5e+02 Score=27.96 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=44.6
Q ss_pred HcC-CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 58 SIG-ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 58 ~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
+.| +++|....|....+-.-+.+-++|...|.-+..+-|.....+....++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 56775444445555555566677788898887777776667778899999999999974
No 230
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=34.12 E-value=3.6e+02 Score=28.00 Aligned_cols=84 Identities=18% Similarity=0.006 Sum_probs=60.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchH--HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPA--LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
..+|++.+...+.... ....+++++|++....+-... +...+++.+..|+..+..+.......+...+++.++.++
T Consensus 179 v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (508)
T TIGR02262 179 VVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIF 256 (508)
T ss_pred EEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEE
Confidence 4688888876554322 123378999988777665433 334556677889888877766788889999999999999
Q ss_pred EEccccHH
Q 044926 116 FVDFHSRA 123 (569)
Q Consensus 116 i~~~~~~~ 123 (569)
...+....
T Consensus 257 ~~~P~~~~ 264 (508)
T TIGR02262 257 YGVPTLYA 264 (508)
T ss_pred ecchHHHH
Confidence 99886544
No 231
>PRK07470 acyl-CoA synthetase; Validated
Probab=33.58 E-value=5.7e+02 Score=26.64 Aligned_cols=89 Identities=15% Similarity=0.086 Sum_probs=56.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeec-cCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTI-NTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ii 116 (569)
..+|.+.+...+......+. .++.++|++..+.+-+-.+-...+..+..|+..+.+ ....+.+.+...+++.++.++.
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 46888877544333222111 256788888888876544333333334455554444 3467888999999999999999
Q ss_pred EccccHHHHHH
Q 044926 117 VDFHSRALVRE 127 (569)
Q Consensus 117 ~~~~~~~~~~~ 127 (569)
..+.....+.+
T Consensus 260 ~~P~~~~~l~~ 270 (528)
T PRK07470 260 TVPTILKMLVE 270 (528)
T ss_pred chHHHHHHHHh
Confidence 98887765543
No 232
>PRK13391 acyl-CoA synthetase; Provisional
Probab=33.52 E-value=3.1e+02 Score=28.51 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=64.8
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK 264 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 264 (569)
.++.++++...+| -.+|...+...+..+... .++.+++++....+..... +...++++..|+..+.++.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 3456666554332 248888887666555543 4788899988777654322 2334566777777776654
Q ss_pred -CCHHHHHHHHHHhCcceeechhHHHHH
Q 044926 265 -FDASIIFDLIRRHGVTHMCGAPVVLNM 291 (569)
Q Consensus 265 -~~~~~~~~~l~~~~~t~~~~~P~~l~~ 291 (569)
.+...+...++..++..++..+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 678889999999999999887765543
No 233
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=33.47 E-value=95 Score=24.57 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=32.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 50 LQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 50 ~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
..+...+...|+.+++.|.++|..+.....+.+.+..+|.-
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666777788889999999999887777777777777863
No 234
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=33.39 E-value=1.1e+02 Score=22.13 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=31.9
Q ss_pred CCchHHHHHHHHHHcCC-------CCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 044926 13 PLTPLVFLERAATVYGD-------SPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSP 72 (569)
Q Consensus 13 ~~tl~~~l~~~a~~~p~-------~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~ 72 (569)
..|+.+++++...++|+ .+++...++.++ .+.-++.||.|+++-|
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCC
Confidence 67999999999988875 334444555544 2335789999999866
No 235
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=33.39 E-value=1.8e+02 Score=30.71 Aligned_cols=82 Identities=6% Similarity=-0.039 Sum_probs=59.2
Q ss_pred EEchHHHHHHHhhhhc----cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceee
Q 044926 209 VHCHRGIFIVAVNTLS----DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 283 (569)
.+|+..+...+..++. ..++..+|++....|....+ ....++++..|+..+.++ .+....+...+.+.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 5788888766665554 35788999998887754332 233566677888887665 47788999999999999988
Q ss_pred chhHHHHH
Q 044926 284 GAPVVLNM 291 (569)
Q Consensus 284 ~~P~~l~~ 291 (569)
........
T Consensus 129 ~~~~~~~~ 136 (560)
T PRK08751 129 VIDNFGTT 136 (560)
T ss_pred EcchhHHH
Confidence 87655443
No 236
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=33.38 E-value=2.3e+02 Score=29.91 Aligned_cols=77 Identities=8% Similarity=0.015 Sum_probs=54.8
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|.+.+...+..+.. ..++.++|++....|... ......++++..|+..+.+++ ...+.+...++..++..++
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 35788888666555444 357899999988777543 223345677778887776654 6788899999999998887
Q ss_pred ch
Q 044926 284 GA 285 (569)
Q Consensus 284 ~~ 285 (569)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 237
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=33.23 E-value=2.1e+02 Score=34.54 Aligned_cols=97 Identities=9% Similarity=-0.159 Sum_probs=64.1
Q ss_pred CCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc
Q 044926 188 TEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK 264 (569)
Q Consensus 188 ~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~ 264 (569)
.++.+|++...+...+......+|++.+...+..++.. .++.+++++....+-...+ ....++++..|+..+.+++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 45567766432211111123468999987777666554 4788999998888754333 2345677778888877765
Q ss_pred -CCHHHHHHHHHHhCcceeech
Q 044926 265 -FDASIIFDLIRRHGVTHMCGA 285 (569)
Q Consensus 265 -~~~~~~~~~l~~~~~t~~~~~ 285 (569)
..++.+...++..++..++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 567788888999898877754
No 238
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=32.85 E-value=2.9e+02 Score=26.47 Aligned_cols=79 Identities=11% Similarity=0.053 Sum_probs=49.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEE
Q 044926 39 TYTWSDTHHRCLQLASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFV 117 (569)
Q Consensus 39 ~~Ty~el~~~v~~~A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (569)
+-+|+. +.+..+...+.+.|. .+|+.|. ....+-.-..+-++|...|..+..+-|...+......++..+++++++
T Consensus 34 tGS~K~--R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~ 110 (299)
T TIGR01136 34 SGSVKD--RIALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILT 110 (299)
T ss_pred CCCccH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence 445554 233333344445453 6677664 444444444555666778887777777665566677899999999999
Q ss_pred ccc
Q 044926 118 DFH 120 (569)
Q Consensus 118 ~~~ 120 (569)
+.+
T Consensus 111 ~~~ 113 (299)
T TIGR01136 111 PAE 113 (299)
T ss_pred CCC
Confidence 865
No 239
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=32.71 E-value=2.1e+02 Score=30.31 Aligned_cols=83 Identities=5% Similarity=-0.083 Sum_probs=59.9
Q ss_pred EEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|+.++...+..+... .++.++|++....+..... ....++++..|+..+.+++ .....+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 468999987766555543 4788999998887754332 2334677778888877754 6788999999999999998
Q ss_pred chhHHHHH
Q 044926 284 GAPVVLNM 291 (569)
Q Consensus 284 ~~P~~l~~ 291 (569)
........
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665443
No 240
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=32.17 E-value=3e+02 Score=28.88 Aligned_cols=79 Identities=13% Similarity=-0.014 Sum_probs=55.9
Q ss_pred EEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|..++...+..++. ..++..++++....+-... .+...++++..|+..+.+++ ...+.+...++..+++.++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 130 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWE-FTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFV 130 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEE
Confidence 46888888666555444 3578899999888775332 23335666777877766644 6788899999999999888
Q ss_pred chhH
Q 044926 284 GAPV 287 (569)
Q Consensus 284 ~~P~ 287 (569)
..+.
T Consensus 131 ~~~~ 134 (538)
T TIGR03208 131 VPSV 134 (538)
T ss_pred Eccc
Confidence 7553
No 241
>PRK06178 acyl-CoA synthetase; Validated
Probab=32.11 E-value=2.1e+02 Score=30.35 Aligned_cols=84 Identities=8% Similarity=0.008 Sum_probs=61.0
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|..++...+..+.. ..++.+++++....+.... .....++++..|+..+.++ ......+...+++.++..+++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788888766655544 3478899999887775443 2234566677777777665 467889999999999999999
Q ss_pred hhHHHHHHH
Q 044926 285 APVVLNMLS 293 (569)
Q Consensus 285 ~P~~l~~l~ 293 (569)
.+..+..+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887766554
No 242
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=31.86 E-value=72 Score=29.20 Aligned_cols=26 Identities=23% Similarity=0.374 Sum_probs=16.8
Q ss_pred ceeEEEEecCcccccccCCccccccccCCCCeeeecceEEE
Q 044926 397 TLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVM 437 (569)
Q Consensus 397 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~ 437 (569)
-++|||+.- ||+.+ .||+.+.++||.
T Consensus 174 iiaELC~SD---------DP~Yt------TGYVA~~~~GY~ 199 (239)
T PF03744_consen 174 IIAELCWSD---------DPDYT------TGYVASKKFGYH 199 (239)
T ss_pred ceEEEEecC---------CCCCc------eEEEEeCCcceE
Confidence 789999863 33322 556677777664
No 243
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.09 E-value=6.6e+02 Score=26.61 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=60.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPAL-YELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (569)
-.+|.+.+...+..+. .....++.+++++...+|-.-.+ +...++.+..|+..+...+..+.+.+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 4678887754443321 11234678899888777754332 233466677888777666677889999999999999999
Q ss_pred EccccHHHHH
Q 044926 117 VDFHSRALVR 126 (569)
Q Consensus 117 ~~~~~~~~~~ 126 (569)
..+.....+.
T Consensus 278 ~~P~~~~~l~ 287 (576)
T PRK05620 278 GVPTLWIQLM 287 (576)
T ss_pred ecCHHHHHHH
Confidence 8877655443
No 244
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=30.82 E-value=5.8e+02 Score=29.96 Aligned_cols=98 Identities=10% Similarity=0.050 Sum_probs=68.1
Q ss_pred cCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEeecc
Q 044926 27 YGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNTIN 95 (569)
Q Consensus 27 ~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 95 (569)
.+|+++++. ++-.+|.+.+...+...... .++.++|++...+|-. ..+....++.+..|+..+..+
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 356666654 22468888887766655433 3678889877666642 223334566777888887766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHHHHHH
Q 044926 96 TRLDARTVSLLLQHCQSKLVFVDFHSRALVRE 127 (569)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (569)
...+.+.+.+.+++.++..+...+.....+.+
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 66788899999999999999998877665443
No 245
>PRK13382 acyl-CoA synthetase; Provisional
Probab=30.68 E-value=2.7e+02 Score=29.34 Aligned_cols=81 Identities=10% Similarity=0.002 Sum_probs=57.6
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|...+...+..++. ..++..+|++....+.... -+...++++..|+..+.+++ .....+...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 5788888666655554 3578899999888875443 23345666677777777754 67788999999999999887
Q ss_pred hhHHHH
Q 044926 285 APVVLN 290 (569)
Q Consensus 285 ~P~~l~ 290 (569)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 655443
No 246
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=30.68 E-value=2.8e+02 Score=29.20 Aligned_cols=93 Identities=10% Similarity=-0.032 Sum_probs=59.1
Q ss_pred eEEEecCCCCCCCceEEEchHHHHHHHhhhhc----cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEE-eccCCH
Q 044926 193 IVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLS----DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNIC-IRKFDA 267 (569)
Q Consensus 193 a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~-~~~~~~ 267 (569)
..++|-+-.++. -.+|.+.+......++. ..++ .+|++...+|+....-.. .+++.-.|+-... .+.+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a-~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIA-LLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHH-HHHHHHcCCEEeecccCCCH
Confidence 344444433333 67788887655544443 3457 999999999986543322 2344444544433 356899
Q ss_pred HHHHHHHHHhCcceeechhHHHH
Q 044926 268 SIIFDLIRRHGVTHMCGAPVVLN 290 (569)
Q Consensus 268 ~~~~~~l~~~~~t~~~~~P~~l~ 290 (569)
+.+..-+...++..+++....+.
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred HHHHHHHHccCCCEEEEeccccc
Confidence 99999999999998886554444
No 247
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=30.65 E-value=3.9e+02 Score=23.77 Aligned_cols=85 Identities=4% Similarity=-0.145 Sum_probs=54.1
Q ss_pred eCCeeeeHHHHHHHHHHHHHHHHH---c-C----CCCCCEEEEEcCCc----hHHHHHHHHhhhccceEeeccCCCCHHH
Q 044926 35 YNNITYTWSDTHHRCLQLASSLLS---I-G----ISRGHVVSVVSPNV----PALYELHFAVPFAAAVLNTINTRLDART 102 (569)
Q Consensus 35 ~~~~~~Ty~el~~~v~~~A~~L~~---~-g----~~~gd~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 102 (569)
+....+|-.|....++.+-..+.. . . -+...+|.+.+..+ .-..+.-..+-..|.-++.+-++.+.++
T Consensus 47 w~~gei~va~~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~ 126 (197)
T TIGR02370 47 FEDGELFLPHVMMSADAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDT 126 (197)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHH
Confidence 444577776665554444333321 1 1 12223555555442 2233333344456999999999999999
Q ss_pred HHHHHhhcCCeEEEEcc
Q 044926 103 VSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 103 l~~~l~~~~~~~ii~~~ 119 (569)
+...+++.+|++|-.+-
T Consensus 127 ~v~~~~~~~pd~v~lS~ 143 (197)
T TIGR02370 127 VVEKVKKEKPLMLTGSA 143 (197)
T ss_pred HHHHHHHcCCCEEEEcc
Confidence 99999999999998874
No 248
>PRK08162 acyl-CoA synthetase; Validated
Probab=30.62 E-value=2e+02 Score=30.23 Aligned_cols=83 Identities=10% Similarity=0.035 Sum_probs=59.7
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|..++...+..+... .++..+|++....|-.... +...++++..|+..+.++ ......+...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 58999887766655554 4788999998887764322 223456666777666664 478899999999999999998
Q ss_pred hhHHHHHH
Q 044926 285 APVVLNML 292 (569)
Q Consensus 285 ~P~~l~~l 292 (569)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87665543
No 249
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=30.20 E-value=5.3e+02 Score=27.67 Aligned_cols=100 Identities=7% Similarity=-0.131 Sum_probs=64.0
Q ss_pred CCCceEEEec--CCCCCCCceEEEchHHHHHHHhhhhccC--CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEe-c
Q 044926 189 EWDPIVLNYT--SGTTMSPKGVVHCHRGIFIVAVNTLSDW--SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICI-R 263 (569)
Q Consensus 189 ~~~~a~i~~T--SGtTG~pk~v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~ 263 (569)
++.++++... .+++|. ...+|...+...+..++..+ .+.++|++...++....+ +...++++..|+..+.+ +
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH-HHHHHHHHHcCceeEecCC
Confidence 4466665432 112232 34689988876665544433 268899998888865332 23345667777777665 3
Q ss_pred c-CC--HHHHHHHHHHhCcceeechhHHHHH
Q 044926 264 K-FD--ASIIFDLIRRHGVTHMCGAPVVLNM 291 (569)
Q Consensus 264 ~-~~--~~~~~~~l~~~~~t~~~~~P~~l~~ 291 (569)
. .. ++.+...++..++..+++.+.....
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 3 22 6789999999999999987765543
No 250
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=30.04 E-value=84 Score=29.87 Aligned_cols=52 Identities=10% Similarity=0.103 Sum_probs=42.4
Q ss_pred eeeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 39 TYTWSDTHH-----RCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 39 ~~Ty~el~~-----~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
.+.|.++.+ ....+...|.+.|+.+++.|.++|.++...-.+++++-.+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 577777763 2456777777889999999999999999999999999888875
No 251
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=29.98 E-value=4.2e+02 Score=23.95 Aligned_cols=90 Identities=12% Similarity=0.057 Sum_probs=54.6
Q ss_pred CCEEEEecCc-hhhhhhhHHHHH-HHhCceEEEec-cCCHHHHHHHHHHhCcceeechhH------HHHHHHcCCCCCCC
Q 044926 231 QPVYLWTLPM-FHSNGWCFPWAM-AAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPV------VLNMLSNYRDPDKK 301 (569)
Q Consensus 231 ~d~~~~~~pl-~~~~g~~~~~~~-~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~------~l~~l~~~~~~~~~ 301 (569)
+.+++...+- .|..|....-.. -..|-.++... ...++.+.+.+.+.+|+++...-. .+..+.+.......
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~ 168 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGI 168 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCC
Confidence 3444444443 677776553333 34566666665 478899999999999998665422 22223332222222
Q ss_pred CCCcCCCceEEEeCCCCcHHHHHHH
Q 044926 302 PLKLAKPVHLVTAGAPPPAAVLLRT 326 (569)
Q Consensus 302 ~~~~~~l~~~~~~g~~l~~~~~~~~ 326 (569)
+. .+++||.+++++..+..
T Consensus 169 ~~------~i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 169 KI------PLLIGGAATSRKHTAVK 187 (213)
T ss_pred CC------eEEEEChhcCHHHHhhh
Confidence 22 37899999998888664
No 252
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=29.88 E-value=6.4e+02 Score=26.42 Aligned_cols=87 Identities=14% Similarity=0.010 Sum_probs=62.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH---HHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPAL---YELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKL 114 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~---~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (569)
..+|.+.+...+...... .++.++|++...+|-.-.+ ....++++..|+..+.. +..........+.+.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 468999888877665443 3678899888777654322 22467788889887754 4556777888899999999
Q ss_pred EEEccccHHHHHHH
Q 044926 115 VFVDFHSRALVREA 128 (569)
Q Consensus 115 ii~~~~~~~~~~~~ 128 (569)
+...+.....+...
T Consensus 276 ~~~~p~~~~~l~~~ 289 (536)
T PRK10946 276 TALVPPAVSLWLQA 289 (536)
T ss_pred EEeChHHHHHHHhh
Confidence 99988766655443
No 253
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=29.46 E-value=1e+02 Score=21.51 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=27.0
Q ss_pred eeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEec
Q 044926 398 LGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKD 447 (569)
Q Consensus 398 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~G 447 (569)
.|.+|++-.. -..|-|+..||...+...+.+++.+
T Consensus 24 ~G~vWlT~~g---------------~~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 24 SGRVWLTREG---------------DPDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred cccEEEECCC---------------CCCCEEECCCCEEEeCCCCEEEEEe
Confidence 4999997532 1127799999999999888888765
No 254
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=29.32 E-value=4.7e+02 Score=28.16 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=72.4
Q ss_pred HHcCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH-HHhhhccceEeec
Q 044926 25 TVYGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELH-FAVPFAAAVLNTI 94 (569)
Q Consensus 25 ~~~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l 94 (569)
...||.+|.+. ++.-+||+-|..++..+...+. -++++|++.-++|-.--+=-++ .++...|.+.+
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~-- 262 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTV-- 262 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEE--
Confidence 45677777654 3367999999999998888886 3689999999999743222222 44444444433
Q ss_pred cCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHH
Q 044926 95 NTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAV 129 (569)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (569)
....+...+..-+...+|..++.=+..++.+.+..
T Consensus 263 ~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 263 LFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred EecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 24566777888999999999999888888776654
No 255
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=28.86 E-value=2.4e+02 Score=29.27 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=58.8
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|...+...+..... ..++..++++....|-... .....++++..|+..+.++. .....+...++..+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 4677777655554444 4578899999887775332 22334566667777776654 67889999999999999988
Q ss_pred hhHHHHHHH
Q 044926 285 APVVLNMLS 293 (569)
Q Consensus 285 ~P~~l~~l~ 293 (569)
.......+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 776666543
No 256
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=28.82 E-value=2.7e+02 Score=27.73 Aligned_cols=65 Identities=14% Similarity=0.167 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccC-----CCCHHHHHHHHhh---cCCeEEEEc
Q 044926 51 QLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINT-----RLDARTVSLLLQH---CQSKLVFVD 118 (569)
Q Consensus 51 ~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii~~ 118 (569)
.+...+...++++||.|.+-.+.. ....-++...|+.++.++. ..+.+.+...+.+ -+.++|+..
T Consensus 56 al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 56 ALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 333444445678899877766543 3334555677877776654 2466777777763 356676643
No 257
>PRK06382 threonine dehydratase; Provisional
Probab=28.80 E-value=3.4e+02 Score=27.44 Aligned_cols=54 Identities=2% Similarity=-0.031 Sum_probs=39.0
Q ss_pred cCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHH
Q 044926 71 SPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRAL 124 (569)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (569)
+..+-.-..+-++|...|.-+..+-|...+......++..+++++++.....+.
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~a 132 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDEA 132 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHHH
Confidence 333444444557888899887777777776677778999999999998754443
No 258
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=28.34 E-value=2.7e+02 Score=28.48 Aligned_cols=69 Identities=12% Similarity=0.062 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHhhhccceEeeccCCCCH--HHHHHHHhhcCCeEEEEcc
Q 044926 48 RCLQLASSLLSIGISRGHVVSVVSPNVPALYE-LHFAVPFAAAVLNTINTRLDA--RTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 48 ~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ii~~~ 119 (569)
.+..+...|.+. ..+.. ++...++...+. ++++++..|-.++.-++.+.. .-+...+...+++..+++.
T Consensus 62 tv~~lE~~la~l--eg~~~-av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAEL--EGGVG-AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHH--hCCCc-EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 345555555553 11222 344555444443 445666777655554444432 2233445677788777765
No 259
>PRK07787 acyl-CoA synthetase; Validated
Probab=28.33 E-value=6.5e+02 Score=25.77 Aligned_cols=84 Identities=12% Similarity=-0.038 Sum_probs=60.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPN--VPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
-.+|+..+...+..++..+ ++.++|++....+- ...++..+++.+..|+.++..+ ...++.+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEAW---QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHhc---CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 4689888887766655443 67788877655543 2345566788889999888664 567888889998 899998
Q ss_pred EEccccHHHHH
Q 044926 116 FVDFHSRALVR 126 (569)
Q Consensus 116 i~~~~~~~~~~ 126 (569)
.+.+.....+.
T Consensus 221 ~~~P~~~~~l~ 231 (471)
T PRK07787 221 FGVPTVWSRIA 231 (471)
T ss_pred EcchHHHHHHH
Confidence 88877665544
No 260
>PRK13390 acyl-CoA synthetase; Provisional
Probab=28.23 E-value=4.8e+02 Score=26.97 Aligned_cols=79 Identities=11% Similarity=-0.031 Sum_probs=55.7
Q ss_pred EEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|...+...+..++.. .++.++|++....+..... +...++++..|+..+.++. ..++.+...+...++..+.
T Consensus 23 ~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i 101 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLV 101 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEE
Confidence 358999987766665543 4788999998877754322 2334666777777766654 6788888999988888877
Q ss_pred chhH
Q 044926 284 GAPV 287 (569)
Q Consensus 284 ~~P~ 287 (569)
....
T Consensus 102 ~~~~ 105 (501)
T PRK13390 102 ASAA 105 (501)
T ss_pred Ecch
Confidence 6543
No 261
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=28.14 E-value=4.3e+02 Score=23.48 Aligned_cols=88 Identities=13% Similarity=0.121 Sum_probs=51.3
Q ss_pred EEEEecCc--hhhhhhhHHHHHH-HhCceEEEec-cCCHHHHHHHHHHhCcceeechhH------HHHHHHcCCCCCCCC
Q 044926 233 VYLWTLPM--FHSNGWCFPWAMA-AVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPV------VLNMLSNYRDPDKKP 302 (569)
Q Consensus 233 ~~~~~~pl--~~~~g~~~~~~~~-~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~------~l~~l~~~~~~~~~~ 302 (569)
+++...+- .|..|....-..+ ..|-.++... ...++.+.+.+++.+|+++...-. .+..+.+..+.....
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~ 165 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYR 165 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCC
Confidence 44444443 7777776644444 4555555454 467899999999999998765521 223333332222111
Q ss_pred CCcCCCceEEEeCCCCcHHHHH
Q 044926 303 LKLAKPVHLVTAGAPPPAAVLL 324 (569)
Q Consensus 303 ~~~~~l~~~~~~g~~l~~~~~~ 324 (569)
.--.+++||..+.+...+
T Consensus 166 ----~~v~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 166 ----DSVKFMVGGAPVTQDWAD 183 (197)
T ss_pred ----CCCEEEEEChhcCHHHHH
Confidence 112488999999875433
No 262
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=28.11 E-value=1.3e+02 Score=23.12 Aligned_cols=53 Identities=6% Similarity=-0.211 Sum_probs=38.0
Q ss_pred eeeeHHHHHHHH----HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926 38 ITYTWSDTHHRC----LQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV 90 (569)
Q Consensus 38 ~~~Ty~el~~~v----~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (569)
..+.+.++.+.. ..+...+...++.+++.|.++|.++.....+...+...|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 356677765432 35666666667777889999999988777777777788864
No 263
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=28.10 E-value=2.2e+02 Score=20.02 Aligned_cols=48 Identities=23% Similarity=0.154 Sum_probs=33.9
Q ss_pred eeHHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccC
Q 044926 460 LSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRL 519 (569)
Q Consensus 460 v~~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l 519 (569)
-...++.+.|.++|+|.+|..+....+ +.+.+.. .+.+++.+.+.+.+
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vtG~~d-----~~~~v~~-------~d~~~l~~~i~~~l 57 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVTGEYD-----LILKVRA-------RDMEELEEFIREKL 57 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEESSSSS-----EEEEEEE-------SSHHHHHHHHHHTH
T ss_pred chHHHHHHHHHcCCCEEEEEEEeCCCC-----EEEEEEE-------CCHHHHHHHHHHHh
Confidence 446789999999999999998866443 4444444 35567777766544
No 264
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=28.00 E-value=5.6e+02 Score=24.80 Aligned_cols=90 Identities=12% Similarity=-0.034 Sum_probs=55.6
Q ss_pred CCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHH
Q 044926 28 GDSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSL 105 (569)
Q Consensus 28 p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (569)
+.++.+-..+ ..-|+++- .+..+-..+.+.|..+++.|..... +-.-..+-++|...|.-++.+-|...+.....
T Consensus 15 g~~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~~~vv~aSs-GN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 91 (316)
T cd06448 15 GCNVFLKLENLQPSGSFKIR--GIGHLCQKSAKQGLNECVHVVCSSG-GNAGLAAAYAARKLGVPCTIVVPESTKPRVVE 91 (316)
T ss_pred CCeEEEEeccCCCcCChHHH--HHHHHHHHHHHhhcccCCeEEEeCC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3345554433 34555542 2222222333334344666655543 44445555777889988888778777777889
Q ss_pred HHhhcCCeEEEEccc
Q 044926 106 LLQHCQSKLVFVDFH 120 (569)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (569)
.++..++++++++..
T Consensus 92 ~l~~~GA~v~~~~~~ 106 (316)
T cd06448 92 KLRDEGATVVVHGKV 106 (316)
T ss_pred HHHHcCCEEEEECCc
Confidence 999999999999865
No 265
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.81 E-value=2.9e+02 Score=29.06 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=59.4
Q ss_pred eeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchH-HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEE
Q 044926 38 ITYTWSDTHHRCLQLASSLL-SIGISRGHVVSVVSPNVPA-LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLV 115 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~-~~g~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (569)
..+|...+.... .+..+. ..++.++|++..+.+-.-. ....+++++..|+..+...+....+.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 357766654322 222232 3477889988877664322 233346778889888877778889999999999999999
Q ss_pred EEccccHHHHHH
Q 044926 116 FVDFHSRALVRE 127 (569)
Q Consensus 116 i~~~~~~~~~~~ 127 (569)
...+.....+.+
T Consensus 272 ~~~P~~~~~l~~ 283 (539)
T PRK07008 272 AGVPTVWLGLLN 283 (539)
T ss_pred EechHHHHHHHh
Confidence 988876655443
No 266
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=27.71 E-value=2.5e+02 Score=28.10 Aligned_cols=59 Identities=14% Similarity=0.200 Sum_probs=31.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC-----CCHHHHHHHHhhcCCeEEE
Q 044926 54 SSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR-----LDARTVSLLLQHCQSKLVF 116 (569)
Q Consensus 54 ~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 116 (569)
..|...++++||.|.+-.+.. .....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 63 lal~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 63 ITLMALGIGPGDEVITPSLTW---VSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHcCCCCCCEEEECCCcH---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 334444567777766654432 22233445567776666432 345666665543 455555
No 267
>PRK05852 acyl-CoA synthetase; Validated
Probab=27.51 E-value=4.8e+02 Score=27.29 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=61.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hHHHHHHHHhhhccceEee-ccCCCCHHHHHHHHhhcCCeE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV--PALYELHFAVPFAAAVLNT-INTRLDARTVSLLLQHCQSKL 114 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 114 (569)
-.+|...+...+..+...+ +++++|++..+.+.. ..++..+++++..|...+. -....+...+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4678888877776665444 678899887776653 3455567777777766443 233567778888999999999
Q ss_pred EEEccccHHHHHH
Q 044926 115 VFVDFHSRALVRE 127 (569)
Q Consensus 115 ii~~~~~~~~~~~ 127 (569)
++..+.....+.+
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9998887665544
No 268
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=27.48 E-value=4.4e+02 Score=23.43 Aligned_cols=85 Identities=4% Similarity=-0.068 Sum_probs=56.3
Q ss_pred eCCeeeeHHHHHHHHHHHHHHHHHc-------CCCCCCEEEEEcCCc----hHHHHHHHHhhhccceEeeccCCCCHHHH
Q 044926 35 YNNITYTWSDTHHRCLQLASSLLSI-------GISRGHVVSVVSPNV----PALYELHFAVPFAAAVLNTINTRLDARTV 103 (569)
Q Consensus 35 ~~~~~~Ty~el~~~v~~~A~~L~~~-------g~~~gd~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (569)
+....++..|..-.+..+-..|... +...+.+|.+.+..+ .-..+.-..+-..|.-++.+..+.+.+++
T Consensus 46 w~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l 125 (201)
T cd02070 46 YEEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEF 125 (201)
T ss_pred HccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 3445788888877766555444431 211244566554442 22223333344679999999999999999
Q ss_pred HHHHhhcCCeEEEEcc
Q 044926 104 SLLLQHCQSKLVFVDF 119 (569)
Q Consensus 104 ~~~l~~~~~~~ii~~~ 119 (569)
...+.+.++++|-.+-
T Consensus 126 ~~~~~~~~~d~v~lS~ 141 (201)
T cd02070 126 VEAVKEHKPDILGLSA 141 (201)
T ss_pred HHHHHHcCCCEEEEec
Confidence 9999999999988774
No 269
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=27.40 E-value=4.9e+02 Score=23.88 Aligned_cols=68 Identities=9% Similarity=-0.120 Sum_probs=45.0
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHH
Q 044926 55 SLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRA 123 (569)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (569)
.+.+.|..++..|..... +-.-..+-++|...|..+..+-|..........++..+++++.++....+
T Consensus 41 ~a~~~g~~~~~~vv~~ss-GN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~ 108 (244)
T cd00640 41 LAEEEGKLPKGVIIESTG-GNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFDD 108 (244)
T ss_pred HHHHcCCCCCCEEEEeCC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 344444224555555433 44445555666778888777777666777788899999999999876443
No 270
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=27.33 E-value=7e+02 Score=29.84 Aligned_cols=98 Identities=12% Similarity=-0.009 Sum_probs=67.9
Q ss_pred cCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH-HHHHHhhhccceEeeccC
Q 044926 27 YGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALY-ELHFAVPFAAAVLNTINT 96 (569)
Q Consensus 27 ~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~ 96 (569)
.|+.+|++. ++..+|.+.+...+.... ...++.++|++....+-+-+.- .-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 356666653 224688877765544333 2347889999998887754443 345677788998887665
Q ss_pred --CCCHHHHHHHHhhcCCeEEEEccccHHHHHH
Q 044926 97 --RLDARTVSLLLQHCQSKLVFVDFHSRALVRE 127 (569)
Q Consensus 97 --~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (569)
...++.+...+++.++..+...+.....+..
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~ 705 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVA 705 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 3567889999999999999988876655443
No 271
>PLN00011 cysteine synthase
Probab=27.27 E-value=4.2e+02 Score=25.78 Aligned_cols=69 Identities=9% Similarity=0.008 Sum_probs=46.2
Q ss_pred HHHHHHHHcC-CCCC-CEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccc
Q 044926 51 QLASSLLSIG-ISRG-HVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFH 120 (569)
Q Consensus 51 ~~A~~L~~~g-~~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (569)
.+...+.+.| +.+| +.|.- ...+-.-..+-++|..+|.-+..+-|...+......++..++++++++..
T Consensus 54 ~~l~~a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 54 SMIKDAEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3333444444 5677 55544 44455555555677888987777767666567788899999999999864
No 272
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.11 E-value=2.5e+02 Score=20.50 Aligned_cols=65 Identities=6% Similarity=0.102 Sum_probs=50.5
Q ss_pred eeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeE
Q 044926 39 TYTWSDTHHRCLQLAS---SLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKL 114 (569)
Q Consensus 39 ~~Ty~el~~~v~~~A~---~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (569)
..||+||.+.-+.++. +|....++..|-|+|+--++.. ..-++.++-..+.+++...+.+.+++.
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 4799999888776654 5556688899999999777532 345677888999999999998888765
No 273
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=26.92 E-value=5.5e+02 Score=24.37 Aligned_cols=66 Identities=8% Similarity=0.016 Sum_probs=45.2
Q ss_pred HHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcccc
Q 044926 55 SLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS 121 (569)
Q Consensus 55 ~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (569)
.+.+.|. ++|+.|.. ...+-.-..+-++|.++|..+..+-|..........++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3444453 35665544 455555555567778889877777676655666788999999999998764
No 274
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=26.67 E-value=1.7e+02 Score=25.55 Aligned_cols=46 Identities=2% Similarity=0.007 Sum_probs=34.0
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Q 044926 37 NITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFA 83 (569)
Q Consensus 37 ~~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 83 (569)
+.-+||.|+.+.+.++|..+.+. +.....+.|...+.-..++..+|
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La 59 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLL 59 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHH
Confidence 45799999999999999999985 22223456666777666666666
No 275
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.61 E-value=3e+02 Score=29.01 Aligned_cols=82 Identities=10% Similarity=-0.055 Sum_probs=57.7
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|+..+...+..+... .++..++++....+-...+ +...++++..|+..+.++. .....+...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 58888887666554443 4788899988777643322 3345666777877776654 67889999999999999888
Q ss_pred hhHHHHH
Q 044926 285 APVVLNM 291 (569)
Q Consensus 285 ~P~~l~~ 291 (569)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7665443
No 276
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=26.37 E-value=79 Score=22.57 Aligned_cols=19 Identities=21% Similarity=0.354 Sum_probs=14.3
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 044926 52 LASSLLSIGISRGHVVSVV 70 (569)
Q Consensus 52 ~A~~L~~~g~~~gd~V~i~ 70 (569)
+-..|.++|++.||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4445566799999999875
No 277
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=26.11 E-value=6.8e+02 Score=25.09 Aligned_cols=109 Identities=9% Similarity=0.002 Sum_probs=67.3
Q ss_pred CCCchHHHHHHHHHHcCCCCeEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCC--CCCEEEEEcCCc--hHHH
Q 044926 12 TPLTPLVFLERAATVYGDSPSIIY---------NNITYTWSDTHHRCLQLASSLLSIGIS--RGHVVSVVSPNV--PALY 78 (569)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~al~~---------~~~~~Ty~el~~~v~~~A~~L~~~g~~--~gd~V~i~~~n~--~~~~ 78 (569)
...++.++++-.++.+-+..+++. ++-.+|++.+...+..++..+ ++. +.|++..++|-. ..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~ 154 (386)
T TIGR02372 78 VRRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFL 154 (386)
T ss_pred hhccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHH
Confidence 344677777777666656666554 225789999998888777765 343 345676666654 2333
Q ss_pred HHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHH
Q 044926 79 ELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVR 126 (569)
Q Consensus 79 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (569)
..++..+..|+.++... ..++..+...++.. .+++..+.....+.
T Consensus 155 ~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l~ 199 (386)
T TIGR02372 155 FSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQLA 199 (386)
T ss_pred HHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHHH
Confidence 44566677888877664 45655555545432 56667666655443
No 278
>PRK12582 acyl-CoA synthetase; Provisional
Probab=26.09 E-value=2.2e+02 Score=30.72 Aligned_cols=79 Identities=5% Similarity=-0.160 Sum_probs=54.7
Q ss_pred eEEEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CC-----HHHHHHHHHHh
Q 044926 207 GVVHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FD-----ASIIFDLIRRH 277 (569)
Q Consensus 207 ~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~l~~~ 277 (569)
.-.+|.+.+...+..++. ..++.++|++....+.... -....++++..|+..+.+++ ++ .+.+...+++.
T Consensus 78 ~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~ 156 (624)
T PRK12582 78 WRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIE-HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLV 156 (624)
T ss_pred eEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhc
Confidence 356899988776665554 3578999999888874322 22334566677777776654 33 37889999999
Q ss_pred Ccceeechh
Q 044926 278 GVTHMCGAP 286 (569)
Q Consensus 278 ~~t~~~~~P 286 (569)
++..++...
T Consensus 157 ~~~~vi~~~ 165 (624)
T PRK12582 157 KPRVVFAQS 165 (624)
T ss_pred CCcEEEecC
Confidence 998887653
No 279
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=26.09 E-value=4.8e+02 Score=24.86 Aligned_cols=66 Identities=9% Similarity=0.042 Sum_probs=44.3
Q ss_pred HHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 53 ASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 53 A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
.....+.|. .+|+.|.- ...+-.-...-++|...|.-+..+-|...+......++..++++++++.
T Consensus 47 v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 47 IVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 333444453 67776655 3444444455566778888777777766556667889999999999975
No 280
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.05 E-value=7.7e+02 Score=26.56 Aligned_cols=83 Identities=2% Similarity=-0.162 Sum_probs=54.5
Q ss_pred EEEchHHHHHHHhhhhccC--CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEe-ccCC---HHHHHHHHHHhCcce
Q 044926 208 VVHCHRGIFIVAVNTLSDW--SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICI-RKFD---ASIIFDLIRRHGVTH 281 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~~~~---~~~~~~~l~~~~~t~ 281 (569)
..+|.+.+...+..++..+ .+.++|++....+....+ +...++++..|+..+.+ +... ...+...++..++..
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY-LIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH-HHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 4678888876665554433 168899998888764322 22345666677766655 2222 467888999999999
Q ss_pred eechhHHHHH
Q 044926 282 MCGAPVVLNM 291 (569)
Q Consensus 282 ~~~~P~~l~~ 291 (569)
++........
T Consensus 133 vi~~~~~~~~ 142 (631)
T PRK07769 133 ILTTTDSAEG 142 (631)
T ss_pred EEEChHHHHH
Confidence 9887765443
No 281
>PRK07476 eutB threonine dehydratase; Provisional
Probab=26.02 E-value=4.1e+02 Score=25.78 Aligned_cols=53 Identities=9% Similarity=-0.051 Sum_probs=37.5
Q ss_pred CCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHH
Q 044926 72 PNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRAL 124 (569)
Q Consensus 72 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (569)
..+-.-..+-++|...|..+..+-|...+......++..++++++++....+.
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 126 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDA 126 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 33444455556778888877766676666667788999999999998654433
No 282
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=25.94 E-value=2.4e+02 Score=29.93 Aligned_cols=80 Identities=6% Similarity=-0.064 Sum_probs=56.4
Q ss_pred EEEchHHHHHHHhhhhccC----CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCccee
Q 044926 208 VVHCHRGIFIVAVNTLSDW----SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHM 282 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~~----~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~ 282 (569)
..+|...+...+..+...+ ++.++|++....+.... .....++++..|+..+.++. ...+.+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 3689888877666555433 78899999887775432 22334566677777666654 678899999999999988
Q ss_pred echhHH
Q 044926 283 CGAPVV 288 (569)
Q Consensus 283 ~~~P~~ 288 (569)
+..+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 283
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=25.80 E-value=66 Score=21.86 Aligned_cols=19 Identities=21% Similarity=0.302 Sum_probs=13.8
Q ss_pred ecceEEEecCCcEEEeccC
Q 044926 431 TGDVGVMHSDGYLEIKDRS 449 (569)
Q Consensus 431 TGD~~~~~~dg~l~~~GR~ 449 (569)
-|.+.|.++||.+++.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 3567888888888888764
No 284
>PRK10717 cysteine synthase A; Provisional
Probab=25.76 E-value=4.4e+02 Score=25.72 Aligned_cols=64 Identities=13% Similarity=0.050 Sum_probs=43.7
Q ss_pred HHHcC-CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccc
Q 044926 56 LLSIG-ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFH 120 (569)
Q Consensus 56 L~~~g-~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (569)
+.+.| +++|+.|.- ...+-.-..+-++|.++|.-+..+-|...+......++..++++++++..
T Consensus 55 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33444 466776544 44444445555667788887776667666667788899999999999853
No 285
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=25.70 E-value=7.1e+02 Score=25.21 Aligned_cols=66 Identities=9% Similarity=-0.102 Sum_probs=51.1
Q ss_pred HHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeec--cCCCCHHHHHHHHhhcCCeEEEEccc
Q 044926 55 SLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTI--NTRLDARTVSLLLQHCQSKLVFVDFH 120 (569)
Q Consensus 55 ~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (569)
.+.+..-=+|-+|+.+.+-.++..+.+..+..+|+-+... ||....++....|.+.+..++-....
T Consensus 23 ~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~ 90 (406)
T TIGR00936 23 RFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGE 90 (406)
T ss_pred HHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCC
Confidence 3333333468899999999999999999999999876655 88778888888898888886654433
No 286
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=25.63 E-value=67 Score=22.93 Aligned_cols=22 Identities=18% Similarity=0.296 Sum_probs=13.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEE
Q 044926 49 CLQLASSLLSIGISRGHVVSVV 70 (569)
Q Consensus 49 v~~~A~~L~~~g~~~gd~V~i~ 70 (569)
..-+-..|.++|++.||.|-|.
T Consensus 42 ~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T PF09269_consen 42 KMGVEKALRKAGAKEGDTVRIG 63 (69)
T ss_dssp HTTHHHHHHTTT--TT-EEEET
T ss_pred HCCHHHHHHHcCCCCCCEEEEc
Confidence 3445566777899999999873
No 287
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=25.60 E-value=3.2e+02 Score=23.37 Aligned_cols=53 Identities=21% Similarity=0.176 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCC
Q 044926 462 SVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLP 520 (569)
Q Consensus 462 ~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~ 520 (569)
...|...+.+.|+|.++.++...+. .++-|.+..+.. ....++++..+.+.+.
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~-----A~Vgv~~~~~~~-~~~~~~iK~~Va~~Vk 108 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY-----AYVGVDLTNGLE-GSVTDELKEKVAETVK 108 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE-----EEEEEEcCCCcc-hhhHHHHHHHHHHHHH
Confidence 4568888889999999999988553 222233333221 1334666666665553
No 288
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=25.00 E-value=6.3e+02 Score=24.36 Aligned_cols=67 Identities=6% Similarity=0.074 Sum_probs=48.9
Q ss_pred CCCEEE-EEcCCchHHHHHH-HHhhhccceEeeccCCCC-------HHHHHHHHhhcCCeEEEEccccHHHHHHHHh
Q 044926 63 RGHVVS-VVSPNVPALYELH-FAVPFAAAVLNTINTRLD-------ARTVSLLLQHCQSKLVFVDFHSRALVREAVS 130 (569)
Q Consensus 63 ~gd~V~-i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~ 130 (569)
.|..|+ ++..+|...-+++ .|+.++|+-++.++++.+ ..+....|... +++|++-......+.+..+
T Consensus 42 ~gk~v~~lF~e~STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~-~D~iv~R~~~~~~~~~~a~ 117 (304)
T PRK00779 42 KGKTLAMIFEKPSTRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY-VDAIMIRTFEHETLEELAE 117 (304)
T ss_pred CCCEEEEEecCCCchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh-CCEEEEcCCChhHHHHHHH
Confidence 355555 6788888887777 888999999999987654 55667778887 8888886655555555544
No 289
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=24.50 E-value=5.4e+02 Score=24.72 Aligned_cols=58 Identities=7% Similarity=0.036 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 61 ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 61 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
+++|++|.=-..-+.-.-.+ +.|...|..++.+-|..-..+.+.+|+.+++.++++..
T Consensus 59 l~pG~tIVE~TSGNTGI~LA-~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALA-MVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCCChHHHHHH-HHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 78999554444443443344 44566787777777766666778899999999999987
No 290
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=24.49 E-value=6.9e+02 Score=25.71 Aligned_cols=85 Identities=6% Similarity=-0.048 Sum_probs=61.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-HHHHHHHHhhhccceEeeccCC--CCHHHHHHHHhhcCCeE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVP-ALYELHFAVPFAAAVLNTINTR--LDARTVSLLLQHCQSKL 114 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (569)
-.+|.+.+...+..+... .++..++++....+... ..+..+++++..|+..+..++. .....+...+.+.++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 478898887666554443 46778887777665532 2344567888999998887654 45677888899999999
Q ss_pred EEEccccHHHH
Q 044926 115 VFVDFHSRALV 125 (569)
Q Consensus 115 ii~~~~~~~~~ 125 (569)
+...+.....+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 99988766544
No 291
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.45 E-value=4.3e+02 Score=25.15 Aligned_cols=88 Identities=10% Similarity=0.061 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHH---HHHHHhhcCCeEEEEc
Q 044926 42 WSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDART---VSLLLQHCQSKLVFVD 118 (569)
Q Consensus 42 y~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii~~ 118 (569)
++++.++.+.+-..+.+.--....+..+...+...+++--+++-..+..-+--....++.+ +...+++.+.++||+.
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 4555555555555555431112344566677788888887876555533221122344554 5566678899999998
Q ss_pred cccHHHHHHHH
Q 044926 119 FHSRALVREAV 129 (569)
Q Consensus 119 ~~~~~~~~~~~ 129 (569)
........+.+
T Consensus 236 ~~~~~~~~~~i 246 (286)
T cd01019 236 PQFHPKIAETL 246 (286)
T ss_pred CCCChHHHHHH
Confidence 87665544444
No 292
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=24.34 E-value=1.8e+02 Score=21.65 Aligned_cols=56 Identities=7% Similarity=-0.022 Sum_probs=40.2
Q ss_pred cCCCCeEEeCCeeeeHHHHHHHHHHHHHHHHHcCC------CCCCEEEEEcCCchHHHHHHH
Q 044926 27 YGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGI------SRGHVVSVVSPNVPALYELHF 82 (569)
Q Consensus 27 ~p~~~al~~~~~~~Ty~el~~~v~~~A~~L~~~g~------~~gd~V~i~~~n~~~~~~~~l 82 (569)
+...+.++.-+..+||.+|.+.++.+-+...+..+ ..||.|.|-..-..+..+=++
T Consensus 7 y~gdi~it~~d~~~s~e~L~~~v~~~c~~~~~q~ft~kw~DEEGDp~tiSS~~EL~EA~rl~ 68 (83)
T cd06404 7 YNGDIMITSIDPSISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQMELEEAFRLY 68 (83)
T ss_pred ecCcEEEEEcCCCcCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCceeecCHHHHHHHHHHH
Confidence 34456666777899999999999999999886543 468888887665444443333
No 293
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=24.14 E-value=4.6e+02 Score=26.16 Aligned_cols=95 Identities=8% Similarity=-0.012 Sum_probs=55.6
Q ss_pred HcCCCCeEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHH
Q 044926 26 VYGDSPSIIYNNI--TYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTV 103 (569)
Q Consensus 26 ~~p~~~al~~~~~--~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (569)
..+.++.+-..+. +-||++ +.+......+.+.+..+ -.+....+-.-...-++|...|..+..+-|...+...
T Consensus 12 ~~g~~i~~K~E~~~ptgS~K~--R~a~~~i~~~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k 86 (380)
T TIGR01127 12 ITGSEVYLKLENLQKTGSFKI--RGALNKIANLSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSK 86 (380)
T ss_pred HhCCeEEEEecCCCCCCCcHH--HHHHHHHHhcchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHH
Confidence 3344555544443 445554 22222233344434322 2333344444555557778888877777777777777
Q ss_pred HHHHhhcCCeEEEEccccHHHH
Q 044926 104 SLLLQHCQSKLVFVDFHSRALV 125 (569)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~~~ 125 (569)
...++..++++++++....+..
T Consensus 87 ~~~~~~~GA~V~~~~~~~~~a~ 108 (380)
T TIGR01127 87 VKATKSYGAEVILHGDDYDEAY 108 (380)
T ss_pred HHHHHHCCCEEEEECCCHHHHH
Confidence 8889999999999986544443
No 294
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=23.92 E-value=2.7e+02 Score=29.30 Aligned_cols=83 Identities=7% Similarity=-0.114 Sum_probs=57.9
Q ss_pred EEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceee
Q 044926 208 VVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 208 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~ 283 (569)
..+|...+...+..++.. .++..+|++....+.....- ...++++..|+..+.++ ....+.+...++..++..++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL-EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH-HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 457888887666555544 47889999888776543322 23456666777776665 46788999999999999988
Q ss_pred chhHHHHH
Q 044926 284 GAPVVLNM 291 (569)
Q Consensus 284 ~~P~~l~~ 291 (569)
........
T Consensus 117 ~~~~~~~~ 124 (542)
T PRK06018 117 TDLTFVPI 124 (542)
T ss_pred EccccHHH
Confidence 76654433
No 295
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=23.76 E-value=3.4e+02 Score=27.78 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC-----CCHHHHHHHHhhcCCeEEEEc
Q 044926 60 GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR-----LDARTVSLLLQHCQSKLVFVD 118 (569)
Q Consensus 60 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (569)
++++||.|.+-.+... ....++...|+.+++++.+ .+.+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~t~~---a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGFP---TTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 6677887776655443 3334445567776665442 345666665543 55666654
No 296
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=23.48 E-value=1.5e+02 Score=28.90 Aligned_cols=54 Identities=9% Similarity=-0.018 Sum_probs=42.2
Q ss_pred eeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 39 TYTWSDTHHR------CLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 39 ~~Ty~el~~~------v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
.+-|.++... ...+...+.+.|+.+++.|.++|..+.....+++++-.+|..-+
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v 297 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDV 297 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCe
Confidence 4667766432 46677778888999999999999999888888888888886433
No 297
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.82 E-value=4.7e+02 Score=24.93 Aligned_cols=85 Identities=11% Similarity=-0.021 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHH---HHHHHHhhcCCeEEE
Q 044926 42 WSDTHHRCLQLASSLLSI--GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDAR---TVSLLLQHCQSKLVF 116 (569)
Q Consensus 42 y~el~~~v~~~A~~L~~~--g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii 116 (569)
++.+.++.+.+-..+.+. .+....+..+...+...++.--+++-..+..-.--...-++. ++...+++.+.++||
T Consensus 152 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 231 (287)
T cd01137 152 AAAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVF 231 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 444555555555555542 333334566777778888887777766654322112233444 455667888999999
Q ss_pred EccccHHHHH
Q 044926 117 VDFHSRALVR 126 (569)
Q Consensus 117 ~~~~~~~~~~ 126 (569)
++........
T Consensus 232 ~e~~~~~~~~ 241 (287)
T cd01137 232 VESTVNDRLM 241 (287)
T ss_pred EeCCCChHHH
Confidence 9887655433
No 298
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=22.75 E-value=6e+02 Score=26.58 Aligned_cols=94 Identities=10% Similarity=0.040 Sum_probs=54.0
Q ss_pred HcCCCCeEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHH
Q 044926 26 VYGDSPSIIYNN--ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTV 103 (569)
Q Consensus 26 ~~p~~~al~~~~--~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (569)
....++.+-..+ ..-||+. .-..+.++. |.+....+| .|. +..+-.-...-++|.++|..++.+-|...+...
T Consensus 29 ~~g~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~~~g-VV~--aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~K 103 (499)
T TIGR01124 29 RLGNRILIKREDLQPVFSFKL-RGAYNKMAQ-LSPEQKARG-VIA--ASAGNHAQGVAFSAARLGLKALIVMPETTPDIK 103 (499)
T ss_pred HhCCEEEEEecCCCCCCCCHH-HHHHHHHHH-hhHHhcCCE-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHH
Confidence 334455555444 3345665 222333333 322211222 333 344444455556778888887777777766666
Q ss_pred HHHHhhcCCeEEEEccccHHH
Q 044926 104 SLLLQHCQSKLVFVDFHSRAL 124 (569)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~~ 124 (569)
...++..+++++++.....+.
T Consensus 104 v~~~r~~GA~Vvl~g~~~d~a 124 (499)
T TIGR01124 104 VDAVRGFGGEVVLHGANFDDA 124 (499)
T ss_pred HHHHHhCCCEEEEeCcCHHHH
Confidence 778999999999998665443
No 299
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=22.71 E-value=7.3e+02 Score=24.28 Aligned_cols=61 Identities=8% Similarity=0.040 Sum_probs=45.2
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccc
Q 044926 60 GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFH 120 (569)
Q Consensus 60 g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (569)
-+.+|..+.+=.-.+---+..-+.|...|..+..+-|..-..+-+.+|+..++.+|.++.+
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 4578876666544444445555777788988877777777777788999999999999864
No 300
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=22.69 E-value=2e+02 Score=31.51 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=42.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCC---------C-----HHHHHHHHhhc-CCe----EEEEcccc
Q 044926 61 ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRL---------D-----ARTVSLLLQHC-QSK----LVFVDFHS 121 (569)
Q Consensus 61 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~~ 121 (569)
+++||.|. +..|+--.+.. |+...|+.++.+.|.. + .+.++..+++. +++ ++|+.+..
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 47898655 67777666555 9999999999998864 3 57777777654 234 77777665
Q ss_pred HH
Q 044926 122 RA 123 (569)
Q Consensus 122 ~~ 123 (569)
.+
T Consensus 309 dG 310 (714)
T PRK15400 309 DG 310 (714)
T ss_pred cc
Confidence 44
No 301
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=22.67 E-value=1.8e+02 Score=21.50 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=22.3
Q ss_pred CeEEeCCe------eeeHHHHHH-HHHHHHHHHHHcCCC
Q 044926 31 PSIIYNNI------TYTWSDTHH-RCLQLASSLLSIGIS 62 (569)
Q Consensus 31 ~al~~~~~------~~Ty~el~~-~v~~~A~~L~~~g~~ 62 (569)
+|+++.++ .++=.||.+ ++.+++.+|.++|++
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~ 54 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS 54 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT--
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce
Confidence 45556552 345578877 999999999998653
No 302
>PRK12483 threonine dehydratase; Reviewed
Probab=22.56 E-value=4.8e+02 Score=27.49 Aligned_cols=60 Identities=7% Similarity=-0.067 Sum_probs=41.8
Q ss_pred EEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHH
Q 044926 69 VVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREA 128 (569)
Q Consensus 69 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (569)
|.+..+-.-...-++|..+|..+..+-|...+......++..+++++++.....+....+
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~A 148 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHA 148 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHH
Confidence 333444455555577788888777777766666667889999999999987655544433
No 303
>PRK07867 acyl-CoA synthetase; Validated
Probab=22.54 E-value=4.9e+02 Score=27.31 Aligned_cols=83 Identities=10% Similarity=-0.076 Sum_probs=58.4
Q ss_pred EEchHHHHHHHhhhhccC----CCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceee
Q 044926 209 VHCHRGIFIVAVNTLSDW----SVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMC 283 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~~----~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~ 283 (569)
.+|...+...+..++..+ +..+++++....+... -.....++++..|+..+.++. ..++.+...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 588888877666555543 4567788877776432 222335667778888877754 6788999999999999999
Q ss_pred chhHHHHHH
Q 044926 284 GAPVVLNML 292 (569)
Q Consensus 284 ~~P~~l~~l 292 (569)
........+
T Consensus 107 ~~~~~~~~~ 115 (529)
T PRK07867 107 TESAHAELL 115 (529)
T ss_pred ECHhHHHHH
Confidence 887665543
No 304
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=22.42 E-value=4.9e+02 Score=26.72 Aligned_cols=67 Identities=7% Similarity=-0.037 Sum_probs=45.6
Q ss_pred HHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 52 LASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 52 ~A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
+...+.+.|. .+|+.|.-. ..+-.-..+-++|...|..+..+-|...+.+....++..++++++++.
T Consensus 49 ~l~~a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 49 MIEDAEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HHHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 3333444454 677765544 444555555577788998877777765556677888999999999975
No 305
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=22.42 E-value=3.5e+02 Score=20.49 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHcCC---------CCCCEEEEE-cCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHH
Q 044926 44 DTHHRCLQLASSLLSIGI---------SRGHVVSVV-SPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLL 107 (569)
Q Consensus 44 el~~~v~~~A~~L~~~g~---------~~gd~V~i~-~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (569)
+.-+|..++...+.+.|. .+-|.|.|+ .|+......+.+++...|.+-.-.-+.++.+++..++
T Consensus 17 ~~~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 17 DSPDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred hcHHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 334455555555555444 356777777 6666666777899999997766677888888887765
No 306
>PRK08813 threonine dehydratase; Provisional
Probab=22.28 E-value=7.7e+02 Score=24.37 Aligned_cols=82 Identities=10% Similarity=-0.076 Sum_probs=48.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEE
Q 044926 38 ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFV 117 (569)
Q Consensus 38 ~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (569)
.+-||++-- +......+.+.|...+ .+....+-.-...-++|...|.-+..+-|...+......++.+++.++.+
T Consensus 59 ptGSfK~Rg--A~~~l~~a~~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~ 133 (349)
T PRK08813 59 RTGSYKVRG--ALNALLAGLERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQH 133 (349)
T ss_pred CcCCCHHHH--HHHHHHHHHHcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEE
Confidence 455665432 2223333444443322 33444444555555777888877666556555556677788999999999
Q ss_pred ccccHHH
Q 044926 118 DFHSRAL 124 (569)
Q Consensus 118 ~~~~~~~ 124 (569)
..+..+.
T Consensus 134 g~~~~~a 140 (349)
T PRK08813 134 GNSYDEA 140 (349)
T ss_pred CCCHHHH
Confidence 8765444
No 307
>PRK06060 acyl-CoA synthetase; Validated
Probab=21.97 E-value=3.8e+02 Score=29.43 Aligned_cols=80 Identities=14% Similarity=-0.044 Sum_probs=55.7
Q ss_pred EEchHHHHHHHhhhhc---cCCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLS---DWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|++.+...+..+.. ..++.+++++...++-...+ +...++++..|+..+.+++ .....+...+++.++..++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 3788888766655544 35789999998887754332 2234666777777776654 67788888889999988877
Q ss_pred hhHHH
Q 044926 285 APVVL 289 (569)
Q Consensus 285 ~P~~l 289 (569)
.....
T Consensus 109 ~~~~~ 113 (705)
T PRK06060 109 SDALR 113 (705)
T ss_pred chHHh
Confidence 65443
No 308
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=21.92 E-value=2.6e+02 Score=18.85 Aligned_cols=46 Identities=20% Similarity=0.215 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhc
Q 044926 462 SVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRG 517 (569)
Q Consensus 462 ~~~iE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~ 517 (569)
...|++.|.++|+|..+.+-.... .+.|...+.. ...++|.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~~~-------~v~v~~~~~~---~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLETK-------TVTVTYDPDK---TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTT-------EEEEEESTTT---SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECCCC-------EEEEEEecCC---CCHHHHHHHHHH
Confidence 457999999999998766644332 1334443332 466888888865
No 309
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=21.78 E-value=2.9e+02 Score=25.71 Aligned_cols=88 Identities=9% Similarity=0.048 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHH---HHHHHhhcCCeEEEEc
Q 044926 42 WSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDART---VSLLLQHCQSKLVFVD 118 (569)
Q Consensus 42 y~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii~~ 118 (569)
++++.++.+.+...+.+.--.-..+..+.+.+..+++.--+++-..|..-.--.-..++.+ +...+++.++++||++
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~e 206 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLPGRPVVVYHDAFQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIFTE 206 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSGGEEEEEESTTHHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCeEEEEChHHHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEEec
Confidence 4556666666666666531111225667778888899888888777766111122344444 5566788999999998
Q ss_pred cccHHHHHHHH
Q 044926 119 FHSRALVREAV 129 (569)
Q Consensus 119 ~~~~~~~~~~~ 129 (569)
........+.+
T Consensus 207 ~~~~~~~~~~l 217 (256)
T PF01297_consen 207 PQFSSKLAEAL 217 (256)
T ss_dssp TTS-THHHHHH
T ss_pred CCCChHHHHHH
Confidence 77665544444
No 310
>PRK08526 threonine dehydratase; Provisional
Probab=21.71 E-value=5.7e+02 Score=25.86 Aligned_cols=58 Identities=2% Similarity=-0.193 Sum_probs=40.2
Q ss_pred cCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHH
Q 044926 71 SPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREA 128 (569)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (569)
...+-.-...-++|..+|..+..+-|...+......++..+++++++.....+....+
T Consensus 74 aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a~~~a 131 (403)
T PRK08526 74 ASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEAYAFA 131 (403)
T ss_pred ECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 4444445555577888888777777766665556778999999999987655544433
No 311
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=21.54 E-value=3.2e+02 Score=29.42 Aligned_cols=79 Identities=3% Similarity=-0.158 Sum_probs=56.4
Q ss_pred eEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEecc-CC-----HHHHHHHHHHh
Q 044926 207 GVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRK-FD-----ASIIFDLIRRH 277 (569)
Q Consensus 207 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~l~~~ 277 (569)
...+|.+.+...+..+... .++.++|++....+....+ +...++++..|+..+.+++ .. ...+...+++.
T Consensus 67 ~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~ 145 (614)
T PRK08180 67 WRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH-ALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELL 145 (614)
T ss_pred eeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcC
Confidence 3567999887766655543 5789999998887764332 2334667778888877754 33 67888999999
Q ss_pred Ccceeechh
Q 044926 278 GVTHMCGAP 286 (569)
Q Consensus 278 ~~t~~~~~P 286 (569)
++..+++..
T Consensus 146 ~~~~li~~~ 154 (614)
T PRK08180 146 TPGLVFADD 154 (614)
T ss_pred CCcEEEEcC
Confidence 999888753
No 312
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=21.33 E-value=1.8e+02 Score=21.36 Aligned_cols=39 Identities=23% Similarity=0.020 Sum_probs=32.5
Q ss_pred HHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhccceEe
Q 044926 54 SSLLSI-GISRGHVVSVVSPNVPALYELHFAVPFAAAVLN 92 (569)
Q Consensus 54 ~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (569)
.+|.+. |++.|+.++.+.....|....+=|++++.-+-+
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 456654 999999999999999999999999998875533
No 313
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=21.15 E-value=6.2e+02 Score=22.86 Aligned_cols=85 Identities=1% Similarity=-0.114 Sum_probs=56.0
Q ss_pred CCeeeeHHHHHHHHHHHHHHHH-------HcC-C-CCCCEEEEEcCCc----hHHHHHHHHhhhccceEeeccCCCCHHH
Q 044926 36 NNITYTWSDTHHRCLQLASSLL-------SIG-I-SRGHVVSVVSPNV----PALYELHFAVPFAAAVLNTINTRLDART 102 (569)
Q Consensus 36 ~~~~~Ty~el~~~v~~~A~~L~-------~~g-~-~~gd~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 102 (569)
....+|=.|..-.++.+...|. ... . ....+|.+.+..+ +-..+.-.-+-..|.-++.+-.+.+.++
T Consensus 51 ~~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 130 (213)
T cd02069 51 GAGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEK 130 (213)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHH
Confidence 4456777777665555544332 222 1 1234566665552 3333333444567999999999999999
Q ss_pred HHHHHhhcCCeEEEEccc
Q 044926 103 VSLLLQHCQSKLVFVDFH 120 (569)
Q Consensus 103 l~~~l~~~~~~~ii~~~~ 120 (569)
+...+.+.++++|..+-.
T Consensus 131 ~v~~~~~~~~~~V~lS~~ 148 (213)
T cd02069 131 ILEAAKEHKADIIGLSGL 148 (213)
T ss_pred HHHHHHHcCCCEEEEccc
Confidence 999999999999988743
No 314
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=21.11 E-value=4.8e+02 Score=21.58 Aligned_cols=43 Identities=9% Similarity=-0.073 Sum_probs=36.4
Q ss_pred HHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEcc
Q 044926 77 LYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119 (569)
Q Consensus 77 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (569)
..+....+-..|.-++.+-.+.+.+++.....+.++++|..+.
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 3344455567899999999999999999999999999999874
No 315
>PLN02356 phosphateglycerate kinase
Probab=21.11 E-value=6.2e+02 Score=25.78 Aligned_cols=68 Identities=16% Similarity=0.088 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEc
Q 044926 50 LQLASSLLSIGI-SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVD 118 (569)
Q Consensus 50 ~~~A~~L~~~g~-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (569)
..+...+.+.|. ++|..|+- ...+-.-+..-++|...|.-+..+-|...+.+....++.+++++++++
T Consensus 89 ~~~i~~a~~~g~~~~~g~Vve-aSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 89 VKIIEEALESGQLFPGGVVTE-GSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHHHHHHHhCCccCCCCEEEE-eCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 333344444443 36666553 333333555557778888877777676666666789999999999995
No 316
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.06 E-value=4.9e+02 Score=24.61 Aligned_cols=87 Identities=13% Similarity=0.043 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCCCCHH---HHHHHHhhcCCeEEE
Q 044926 42 WSDTHHRCLQLASSLLSI--GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDAR---TVSLLLQHCQSKLVF 116 (569)
Q Consensus 42 y~el~~~v~~~A~~L~~~--g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii 116 (569)
++.+.++.+.+-..+++. .+..++++.+...+...+++--+++-..|..-..=...-++. ++...+++.+.++||
T Consensus 136 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 215 (276)
T cd01016 136 SEAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQGISTDSEAGLRDINELVDLIVERKIKAIF 215 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcCCCcccCCCHHHHHHHHHHHHHcCCCEEE
Confidence 344444444444444442 223345677777778888888888776663222111223344 456667788999999
Q ss_pred EccccHHHHHHH
Q 044926 117 VDFHSRALVREA 128 (569)
Q Consensus 117 ~~~~~~~~~~~~ 128 (569)
+.........+.
T Consensus 216 ~e~~~~~~~~~~ 227 (276)
T cd01016 216 VESSVNQKSIEA 227 (276)
T ss_pred EeCCCCHHHHHH
Confidence 988765544433
No 317
>TIGR01204 bioW 6-carboxyhexanoate--CoA ligase. Alternate name: pimeloyl-CoA synthase.
Probab=20.85 E-value=2.5e+02 Score=25.62 Aligned_cols=9 Identities=11% Similarity=0.294 Sum_probs=7.2
Q ss_pred ceeEEEEec
Q 044926 397 TLGEIVLRG 405 (569)
Q Consensus 397 ~~Gel~v~~ 405 (569)
-++|||+.-
T Consensus 167 vvAElC~SD 175 (232)
T TIGR01204 167 VVAELCWSD 175 (232)
T ss_pred eEEEEEecC
Confidence 689999863
No 318
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=20.82 E-value=4.8e+02 Score=28.70 Aligned_cols=86 Identities=6% Similarity=-0.058 Sum_probs=61.9
Q ss_pred ceEEEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhH-HHHHHHhCceEEEec-cCCHHHHHHHHHHhCcc
Q 044926 206 KGVVHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCF-PWAMAAVGGTNICIR-KFDASIIFDLIRRHGVT 280 (569)
Q Consensus 206 k~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t 280 (569)
....+|.+.+...+..++.. +++.++|++....+-.. .+.. .++++..|+..+.+. ..+++.+...+++.++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 35688999987777665544 58899999988877542 3333 455666777666654 57888999999999999
Q ss_pred eeechhHHHHHHH
Q 044926 281 HMCGAPVVLNMLS 293 (569)
Q Consensus 281 ~~~~~P~~l~~l~ 293 (569)
.+++....+..+.
T Consensus 196 ~lv~~~~~~~~l~ 208 (700)
T PTZ00216 196 AIVCNGKNVPNLL 208 (700)
T ss_pred EEEECHHHHHHHH
Confidence 9988776655543
No 319
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.64 E-value=3.4e+02 Score=28.68 Aligned_cols=81 Identities=9% Similarity=-0.049 Sum_probs=57.0
Q ss_pred EEchHHHHHHHhhhhcc---CCCCCCCEEEEecCchhhhhhhHHHHHHHhCceEEEec-cCCHHHHHHHHHHhCcceeec
Q 044926 209 VHCHRGIFIVAVNTLSD---WSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIR-KFDASIIFDLIRRHGVTHMCG 284 (569)
Q Consensus 209 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~pl~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~ 284 (569)
.+|...+...+..++.. .++..+|++....+-.... +...++++..|+..+.++ .+..+.+...++..+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 47888887666555443 4788899998887764332 233456667776666664 467888999999999999988
Q ss_pred hhHHHH
Q 044926 285 APVVLN 290 (569)
Q Consensus 285 ~P~~l~ 290 (569)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 765443
No 320
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=20.53 E-value=1.8e+02 Score=29.53 Aligned_cols=59 Identities=17% Similarity=0.118 Sum_probs=38.3
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC---------CCH-----HHHHHHHhhcC-Ce----EEEEcccc
Q 044926 61 ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR---------LDA-----RTVSLLLQHCQ-SK----LVFVDFHS 121 (569)
Q Consensus 61 ~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~l~~~l~~~~-~~----~ii~~~~~ 121 (569)
+++||.|. +-.|+-..+.. |+...|+.++.++|. .+. +.+...+++.. ++ ++|+++..
T Consensus 103 ~~~gd~VL-v~RN~HkSv~~--alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKVL-VDRNCHKSVYN--ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEEE-EETT--HHHHH--HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEEE-EcCCcHHHHHH--HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 37899754 45565555554 999999999999884 233 78888887643 33 46676654
Q ss_pred H
Q 044926 122 R 122 (569)
Q Consensus 122 ~ 122 (569)
.
T Consensus 180 ~ 180 (417)
T PF01276_consen 180 Y 180 (417)
T ss_dssp T
T ss_pred C
Confidence 3
No 321
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=20.50 E-value=5.3e+02 Score=24.93 Aligned_cols=85 Identities=18% Similarity=0.169 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHhhhccceEeeccCC--CCHHH---HHHHHhhcCCeEE
Q 044926 42 WSDTHHRCLQLASSLLSI-GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTR--LDART---VSLLLQHCQSKLV 115 (569)
Q Consensus 42 y~el~~~v~~~A~~L~~~-g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~~~---l~~~l~~~~~~~i 115 (569)
++.+.++.+.+-..+++. .-.++ +..+...+...++.--+++-..|.+- +.+. -++.+ +...+++.++++|
T Consensus 180 ~~~~~~~L~~l~~~~~~~l~~~~~-~~~i~~H~af~Yf~~~ygl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~I 256 (311)
T PRK09545 180 LKDFEAQLAQTDKQIGNQLAPVKG-KGYFVFHDAYGYFEKHYGLTPLGHFT--VNPEIQPGAQRLHEIRTQLVEQKATCV 256 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCC-CcEEEECchHHHHHHhCCCceeeeec--cCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 444555555555555543 11223 34455677788888888877766432 3332 34455 5556667889999
Q ss_pred EEccccHHHHHHHH
Q 044926 116 FVDFHSRALVREAV 129 (569)
Q Consensus 116 i~~~~~~~~~~~~~ 129 (569)
|+++.......+.+
T Consensus 257 f~e~~~~~~~~~~l 270 (311)
T PRK09545 257 FAEPQFRPAVIESV 270 (311)
T ss_pred EecCCCChHHHHHH
Confidence 99988766554444
Done!