Query 044932
Match_columns 689
No_of_seqs 504 out of 2442
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 14:17:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.6 2.7E-15 9.2E-20 152.3 9.4 96 309-412 40-137 (257)
2 3h2b_A SAM-dependent methyltra 99.6 1.9E-14 6.4E-19 136.5 13.6 126 309-439 42-183 (203)
3 3pfg_A N-methyltransferase; N, 99.6 5.3E-14 1.8E-18 139.1 17.0 157 285-454 33-252 (263)
4 3hnr_A Probable methyltransfer 99.6 7E-14 2.4E-18 133.9 16.4 139 308-455 45-216 (220)
5 3dlc_A Putative S-adenosyl-L-m 99.6 3.1E-14 1.1E-18 134.6 13.6 134 311-452 46-215 (219)
6 1xtp_A LMAJ004091AAA; SGPP, st 99.6 9.8E-15 3.4E-19 142.5 10.3 143 285-436 74-236 (254)
7 3cgg_A SAM-dependent methyltra 99.5 1.5E-13 5.2E-18 127.3 16.2 139 308-451 46-195 (195)
8 3l8d_A Methyltransferase; stru 99.5 6.3E-14 2.1E-18 135.8 13.5 131 293-435 44-197 (242)
9 2p7i_A Hypothetical protein; p 99.5 1.1E-13 3.7E-18 133.2 14.6 120 309-435 43-196 (250)
10 1vl5_A Unknown conserved prote 99.5 6.7E-14 2.3E-18 138.2 13.3 97 308-410 37-140 (260)
11 3bus_A REBM, methyltransferase 99.5 1.8E-13 6.3E-18 135.4 15.9 119 283-411 40-167 (273)
12 3bxo_A N,N-dimethyltransferase 99.5 1.9E-13 6.4E-18 132.0 15.4 114 285-410 23-141 (239)
13 1pjz_A Thiopurine S-methyltran 99.5 2.1E-14 7.2E-19 138.9 8.1 120 309-434 23-172 (203)
14 3f4k_A Putative methyltransfer 99.5 9.4E-14 3.2E-18 136.0 12.6 132 293-434 34-192 (257)
15 1y8c_A S-adenosylmethionine-de 99.5 2.7E-13 9.3E-18 130.7 15.6 97 308-411 37-143 (246)
16 2o57_A Putative sarcosine dime 99.5 1.3E-13 4.4E-18 138.7 13.6 144 283-435 57-231 (297)
17 3g5l_A Putative S-adenosylmeth 99.5 1.5E-13 5.3E-18 134.8 13.7 98 308-411 44-146 (253)
18 3dli_A Methyltransferase; PSI- 99.5 9.9E-14 3.4E-18 135.7 12.0 133 290-434 26-180 (240)
19 2zfu_A Nucleomethylin, cerebra 99.5 1.2E-13 4E-18 132.4 11.9 127 308-453 67-193 (215)
20 3dh0_A SAM dependent methyltra 99.5 1.6E-13 5.6E-18 131.2 12.7 139 308-453 37-195 (219)
21 1nkv_A Hypothetical protein YJ 99.5 7.7E-14 2.6E-18 136.6 10.6 110 291-411 23-141 (256)
22 3i9f_A Putative type 11 methyl 99.5 2.1E-13 7.3E-18 125.8 12.7 134 308-453 17-162 (170)
23 3kkz_A Uncharacterized protein 99.5 2.9E-13 9.8E-18 134.4 14.4 120 308-434 46-192 (267)
24 3ujc_A Phosphoethanolamine N-m 99.5 1.6E-13 5.3E-18 134.3 12.3 122 308-435 55-203 (266)
25 4e2x_A TCAB9; kijanose, tetron 99.5 5.9E-14 2E-18 148.9 9.8 152 276-437 79-252 (416)
26 3e8s_A Putative SAM dependent 99.5 2.7E-13 9.1E-18 128.9 13.2 135 309-451 53-227 (227)
27 3dtn_A Putative methyltransfer 99.5 5.3E-13 1.8E-17 129.2 15.1 142 308-457 44-232 (234)
28 2avn_A Ubiquinone/menaquinone 99.5 1.7E-13 5.8E-18 136.1 11.5 99 309-413 55-155 (260)
29 2gs9_A Hypothetical protein TT 99.5 2.6E-13 8.8E-18 129.4 11.4 99 308-413 36-135 (211)
30 3ocj_A Putative exported prote 99.4 6.6E-13 2.3E-17 135.2 14.5 137 308-451 118-304 (305)
31 3ege_A Putative methyltransfer 99.4 3.7E-13 1.3E-17 134.0 12.3 109 292-412 22-132 (261)
32 3ou2_A SAM-dependent methyltra 99.4 5.1E-13 1.8E-17 126.8 12.6 121 309-436 47-203 (218)
33 2ex4_A Adrenal gland protein A 99.4 4.9E-13 1.7E-17 130.8 12.7 124 308-437 79-224 (241)
34 3e23_A Uncharacterized protein 99.4 3.3E-13 1.1E-17 129.0 10.8 120 309-436 44-180 (211)
35 3sm3_A SAM-dependent methyltra 99.4 8.1E-13 2.8E-17 126.6 13.4 123 309-437 31-206 (235)
36 1xxl_A YCGJ protein; structura 99.4 7.5E-13 2.6E-17 129.9 13.3 98 308-411 21-125 (239)
37 2yqz_A Hypothetical protein TT 99.4 7E-13 2.4E-17 129.7 12.7 96 308-409 39-140 (263)
38 4htf_A S-adenosylmethionine-de 99.4 5.3E-13 1.8E-17 133.7 12.1 121 309-435 69-229 (285)
39 3d2l_A SAM-dependent methyltra 99.4 2E-12 6.9E-17 125.0 15.7 109 291-411 22-138 (243)
40 3bkw_A MLL3908 protein, S-aden 99.4 9.8E-13 3.3E-17 127.2 13.4 98 308-411 43-145 (243)
41 3ccf_A Cyclopropane-fatty-acyl 99.4 6.4E-13 2.2E-17 133.0 12.5 98 308-412 57-156 (279)
42 2p35_A Trans-aconitate 2-methy 99.4 1.3E-12 4.5E-17 127.7 14.0 98 308-412 33-134 (259)
43 3thr_A Glycine N-methyltransfe 99.4 1.6E-13 5.6E-18 137.4 7.5 114 290-412 43-177 (293)
44 1vlm_A SAM-dependent methyltra 99.4 1.9E-12 6.5E-17 125.1 14.4 117 309-435 48-185 (219)
45 3vc1_A Geranyl diphosphate 2-C 99.4 1.2E-12 4.1E-17 133.7 13.6 122 308-436 117-267 (312)
46 2kw5_A SLR1183 protein; struct 99.4 4.7E-13 1.6E-17 126.8 9.8 117 311-435 32-168 (202)
47 4gek_A TRNA (CMO5U34)-methyltr 99.4 5.7E-13 2E-17 135.2 11.0 96 308-411 70-179 (261)
48 3g2m_A PCZA361.24; SAM-depende 99.4 1.2E-12 4E-17 132.6 12.7 97 310-412 84-192 (299)
49 3jwg_A HEN1, methyltransferase 99.4 4.6E-12 1.6E-16 121.7 16.0 140 308-453 29-212 (219)
50 2pxx_A Uncharacterized protein 99.4 1.9E-12 6.4E-17 122.4 13.1 118 285-413 25-162 (215)
51 2xvm_A Tellurite resistance pr 99.4 2.4E-12 8.1E-17 120.6 12.9 120 309-436 33-171 (199)
52 2aot_A HMT, histamine N-methyl 99.4 2.7E-13 9.4E-18 137.3 7.0 99 308-412 52-174 (292)
53 3ofk_A Nodulation protein S; N 99.4 4.5E-12 1.5E-16 121.3 15.0 98 308-412 51-156 (216)
54 3cc8_A Putative methyltransfer 99.4 1.8E-12 6.3E-17 123.4 12.1 120 308-435 32-182 (230)
55 1kpg_A CFA synthase;, cyclopro 99.4 6.2E-12 2.1E-16 125.9 16.5 122 278-411 38-169 (287)
56 2a14_A Indolethylamine N-methy 99.4 5.1E-13 1.8E-17 133.8 8.5 123 308-435 55-235 (263)
57 3g5t_A Trans-aconitate 3-methy 99.4 1.4E-12 4.9E-17 131.9 11.6 95 308-409 36-148 (299)
58 3gu3_A Methyltransferase; alph 99.4 2.1E-12 7E-17 130.3 12.2 112 291-412 8-128 (284)
59 3lcc_A Putative methyl chlorid 99.4 2.5E-12 8.7E-17 125.0 11.9 121 310-437 68-206 (235)
60 4fsd_A Arsenic methyltransfera 99.4 1.3E-12 4.3E-17 138.5 10.6 121 308-434 83-247 (383)
61 1ve3_A Hypothetical protein PH 99.4 2.3E-12 7.9E-17 123.3 11.2 114 288-412 24-144 (227)
62 2gb4_A Thiopurine S-methyltran 99.4 8.6E-13 2.9E-17 133.3 8.6 120 309-434 69-223 (252)
63 3jwh_A HEN1; methyltransferase 99.4 4.1E-12 1.4E-16 122.1 12.6 96 309-410 30-141 (217)
64 1zx0_A Guanidinoacetate N-meth 99.3 6.7E-13 2.3E-17 130.0 6.7 112 290-411 47-171 (236)
65 2p8j_A S-adenosylmethionine-de 99.3 2.6E-12 8.9E-17 121.7 10.5 98 309-411 24-129 (209)
66 3hem_A Cyclopropane-fatty-acyl 99.3 1.1E-11 3.9E-16 125.5 15.0 121 278-411 46-184 (302)
67 2i62_A Nicotinamide N-methyltr 99.3 3.2E-12 1.1E-16 125.2 10.2 124 308-436 56-237 (265)
68 3orh_A Guanidinoacetate N-meth 99.3 1.3E-12 4.4E-17 129.5 7.3 110 291-410 48-170 (236)
69 3m70_A Tellurite resistance pr 99.3 6.2E-12 2.1E-16 126.0 12.3 123 309-435 121-257 (286)
70 3mgg_A Methyltransferase; NYSG 99.3 1.8E-12 6.3E-17 128.7 8.2 98 308-411 37-143 (276)
71 2g72_A Phenylethanolamine N-me 99.3 4.3E-12 1.5E-16 127.8 10.8 122 308-435 71-253 (289)
72 3mti_A RRNA methylase; SAM-dep 99.3 2.8E-11 9.5E-16 113.3 15.5 122 308-434 22-165 (185)
73 3m33_A Uncharacterized protein 99.3 6.4E-12 2.2E-16 122.5 11.4 112 309-435 49-164 (226)
74 1wzn_A SAM-dependent methyltra 99.3 7.5E-12 2.6E-16 122.4 11.3 99 308-412 41-147 (252)
75 1ri5_A MRNA capping enzyme; me 99.3 5.9E-12 2E-16 125.3 10.5 99 308-412 64-176 (298)
76 1dus_A MJ0882; hypothetical pr 99.3 3.1E-11 1E-15 111.7 14.6 99 308-413 52-160 (194)
77 3hp7_A Hemolysin, putative; st 99.3 2.9E-11 9.8E-16 126.0 15.8 135 308-451 85-250 (291)
78 1xdz_A Methyltransferase GIDB; 99.3 1.7E-11 6E-16 120.7 13.2 133 309-451 71-219 (240)
79 2vdw_A Vaccinia virus capping 99.3 3.3E-12 1.1E-16 132.2 7.8 98 309-412 49-171 (302)
80 3grz_A L11 mtase, ribosomal pr 99.3 2.1E-11 7.2E-16 116.2 12.8 130 309-453 61-198 (205)
81 1p91_A Ribosomal RNA large sub 99.3 7.4E-12 2.5E-16 124.2 9.8 93 308-413 85-181 (269)
82 2fk8_A Methoxy mycolic acid sy 99.3 3E-11 1E-15 123.0 13.8 116 285-412 71-196 (318)
83 3opn_A Putative hemolysin; str 99.3 1.1E-11 3.8E-16 123.9 10.0 130 308-451 37-202 (232)
84 3evz_A Methyltransferase; NYSG 99.2 9.5E-11 3.2E-15 113.3 15.2 140 308-453 55-222 (230)
85 1nt2_A Fibrillarin-like PRE-rR 99.2 1.9E-11 6.6E-16 119.6 10.0 98 308-411 57-162 (210)
86 3q87_B N6 adenine specific DNA 99.2 6.7E-11 2.3E-15 111.2 13.3 128 309-450 24-161 (170)
87 3eey_A Putative rRNA methylase 99.2 5.8E-11 2E-15 112.2 12.5 139 309-452 23-189 (197)
88 3bkx_A SAM-dependent methyltra 99.2 8.6E-11 2.9E-15 116.4 14.2 101 308-410 43-159 (275)
89 1yzh_A TRNA (guanine-N(7)-)-me 99.2 6.7E-11 2.3E-15 114.1 13.0 119 309-435 42-179 (214)
90 2fca_A TRNA (guanine-N(7)-)-me 99.2 3.4E-11 1.2E-15 117.4 10.6 118 309-434 39-175 (213)
91 3bgv_A MRNA CAP guanine-N7 met 99.2 4E-11 1.4E-15 122.3 11.0 99 309-413 35-158 (313)
92 3p9n_A Possible methyltransfer 99.2 4.1E-11 1.4E-15 113.3 10.1 100 308-412 44-155 (189)
93 4dzr_A Protein-(glutamine-N5) 99.2 1.4E-11 4.7E-16 116.1 6.8 149 291-451 16-205 (215)
94 3mcz_A O-methyltransferase; ad 99.2 1.2E-10 4.1E-15 120.5 14.1 139 309-452 180-350 (352)
95 3fpf_A Mtnas, putative unchara 99.2 6.8E-11 2.3E-15 123.8 12.0 134 308-453 122-266 (298)
96 3p2e_A 16S rRNA methylase; met 99.2 2.4E-11 8E-16 120.4 8.1 122 308-435 24-182 (225)
97 3hm2_A Precorrin-6Y C5,15-meth 99.2 1.6E-10 5.5E-15 106.5 13.0 114 308-433 25-148 (178)
98 1jsx_A Glucose-inhibited divis 99.2 1.2E-10 4.2E-15 110.6 12.6 127 309-451 66-205 (207)
99 2nxc_A L11 mtase, ribosomal pr 99.2 1.3E-10 4.5E-15 116.5 13.3 145 290-450 108-254 (254)
100 3dp7_A SAM-dependent methyltra 99.2 1.1E-10 3.7E-15 122.7 13.1 139 308-453 179-357 (363)
101 3q7e_A Protein arginine N-meth 99.2 7.5E-11 2.6E-15 123.9 11.7 114 290-409 52-172 (349)
102 3ggd_A SAM-dependent methyltra 99.2 3.3E-11 1.1E-15 117.7 8.3 99 308-412 56-165 (245)
103 3iv6_A Putative Zn-dependent a 99.2 8.8E-11 3E-15 120.3 11.8 116 308-430 45-169 (261)
104 3g07_A 7SK snRNA methylphospha 99.2 3.4E-11 1.2E-15 122.7 8.4 99 308-412 46-222 (292)
105 3mq2_A 16S rRNA methyltransfer 99.2 1E-10 3.4E-15 112.5 11.0 126 308-435 27-181 (218)
106 3dxy_A TRNA (guanine-N(7)-)-me 99.2 4.1E-11 1.4E-15 118.1 8.4 104 309-414 35-154 (218)
107 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.1E-10 3.9E-15 114.0 11.3 122 308-435 77-214 (233)
108 1x19_A CRTF-related protein; m 99.2 2.8E-10 9.7E-15 118.6 14.7 138 308-451 190-359 (359)
109 3njr_A Precorrin-6Y methylase; 99.2 7E-10 2.4E-14 107.6 16.3 114 308-434 55-176 (204)
110 3e05_A Precorrin-6Y C5,15-meth 99.1 5.7E-10 1.9E-14 106.4 14.9 113 308-431 40-161 (204)
111 3i53_A O-methyltransferase; CO 99.1 5.7E-10 1.9E-14 114.9 15.9 133 308-450 169-331 (332)
112 3g89_A Ribosomal RNA small sub 99.1 3.8E-10 1.3E-14 113.5 14.0 134 308-451 80-229 (249)
113 3gwz_A MMCR; methyltransferase 99.1 6.9E-10 2.4E-14 116.8 16.4 135 308-450 202-368 (369)
114 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.4E-10 4.7E-15 115.7 10.0 99 309-413 47-171 (235)
115 2b3t_A Protein methyltransfera 99.1 9.7E-10 3.3E-14 110.6 16.1 133 309-450 110-275 (276)
116 1l3i_A Precorrin-6Y methyltran 99.1 2.9E-10 9.9E-15 105.0 11.2 113 308-432 33-154 (192)
117 2r3s_A Uncharacterized protein 99.1 3.6E-10 1.2E-14 115.5 13.0 135 308-450 165-334 (335)
118 2frn_A Hypothetical protein PH 99.1 2.4E-10 8.1E-15 116.2 11.5 136 282-434 105-253 (278)
119 2fyt_A Protein arginine N-meth 99.1 3.4E-10 1.2E-14 118.7 12.6 113 290-408 50-169 (340)
120 1fbn_A MJ fibrillarin homologu 99.1 4.7E-10 1.6E-14 109.7 12.3 131 308-451 74-228 (230)
121 4df3_A Fibrillarin-like rRNA/T 99.1 2.4E-10 8.2E-15 115.6 10.4 120 308-435 77-214 (233)
122 2yxd_A Probable cobalt-precorr 99.1 1.4E-09 4.7E-14 99.9 14.5 113 308-435 35-154 (183)
123 2fhp_A Methylase, putative; al 99.1 2.4E-10 8.2E-15 106.1 9.2 143 289-450 28-185 (187)
124 1ej0_A FTSJ; methyltransferase 99.1 1.8E-10 6.2E-15 104.2 7.7 94 308-413 22-139 (180)
125 3lpm_A Putative methyltransfer 99.1 4.6E-10 1.6E-14 111.9 11.3 118 309-434 50-197 (259)
126 3tfw_A Putative O-methyltransf 99.1 3.4E-09 1.2E-13 105.5 16.7 142 309-459 64-233 (248)
127 3dmg_A Probable ribosomal RNA 99.1 7.6E-10 2.6E-14 118.5 12.7 100 308-413 233-343 (381)
128 1qzz_A RDMB, aclacinomycin-10- 99.1 1E-09 3.4E-14 114.3 13.3 136 308-452 182-357 (374)
129 3htx_A HEN1; HEN1, small RNA m 99.1 9E-10 3.1E-14 128.4 14.1 98 308-412 721-836 (950)
130 3r0q_C Probable protein argini 99.0 5.5E-10 1.9E-14 118.6 11.2 115 289-410 48-169 (376)
131 2pwy_A TRNA (adenine-N(1)-)-me 99.0 6.8E-10 2.3E-14 108.7 11.0 114 308-434 96-220 (258)
132 3id6_C Fibrillarin-like rRNA/T 99.0 1.6E-09 5.6E-14 109.2 14.0 138 308-451 76-231 (232)
133 2ld4_A Anamorsin; methyltransf 99.0 2.3E-10 7.7E-15 106.8 7.1 105 308-430 12-128 (176)
134 1g6q_1 HnRNP arginine N-methyl 99.0 8.6E-10 2.9E-14 114.8 12.1 115 289-409 23-144 (328)
135 1af7_A Chemotaxis receptor met 99.0 3.8E-10 1.3E-14 116.1 9.1 98 309-412 106-254 (274)
136 2ift_A Putative methylase HI07 99.0 4.4E-10 1.5E-14 108.4 8.9 129 309-454 54-197 (201)
137 2qe6_A Uncharacterized protein 99.0 8.8E-10 3E-14 112.3 11.2 99 308-412 77-198 (274)
138 1tw3_A COMT, carminomycin 4-O- 99.0 2.4E-09 8.1E-14 111.1 14.5 140 308-452 183-357 (360)
139 1yb2_A Hypothetical protein TA 99.0 9.4E-10 3.2E-14 110.8 11.1 113 308-434 110-233 (275)
140 3uwp_A Histone-lysine N-methyl 99.0 3.1E-10 1.1E-14 123.9 7.5 102 308-411 173-289 (438)
141 2ip2_A Probable phenazine-spec 99.0 2.9E-09 1E-13 109.3 14.3 136 310-450 169-333 (334)
142 3mb5_A SAM-dependent methyltra 99.0 1E-09 3.4E-14 108.0 10.1 112 308-433 93-217 (255)
143 3reo_A (ISO)eugenol O-methyltr 99.0 1.6E-09 5.5E-14 114.3 12.1 119 308-436 203-353 (368)
144 2y1w_A Histone-arginine methyl 99.0 2.1E-09 7.2E-14 112.7 12.1 114 290-410 36-155 (348)
145 2fpo_A Methylase YHHF; structu 99.0 1.1E-09 3.8E-14 105.6 9.2 128 309-452 55-193 (202)
146 3lst_A CALO1 methyltransferase 99.0 1.5E-09 5E-14 113.1 10.5 120 308-437 184-335 (348)
147 1g8a_A Fibrillarin-like PRE-rR 99.0 2.9E-09 1E-13 103.1 11.7 132 308-450 73-226 (227)
148 1i9g_A Hypothetical protein RV 99.0 1.7E-09 5.9E-14 107.7 10.2 94 308-412 99-205 (280)
149 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.6E-09 5.3E-14 107.3 9.7 98 309-412 50-175 (246)
150 1vbf_A 231AA long hypothetical 99.0 9.8E-10 3.4E-14 106.3 7.9 94 308-413 70-168 (231)
151 3lbf_A Protein-L-isoaspartate 98.9 1E-09 3.5E-14 104.7 7.7 93 308-412 77-176 (210)
152 3dr5_A Putative O-methyltransf 98.9 2.8E-09 9.4E-14 105.2 10.9 151 288-455 40-217 (221)
153 3sso_A Methyltransferase; macr 98.9 5.6E-10 1.9E-14 121.5 6.3 93 308-411 216-325 (419)
154 3tma_A Methyltransferase; thum 98.9 4.3E-09 1.5E-13 110.0 12.7 122 308-436 203-337 (354)
155 3gdh_A Trimethylguanosine synt 98.9 6.1E-11 2.1E-15 115.7 -1.2 95 309-410 79-181 (241)
156 1fp2_A Isoflavone O-methyltran 98.9 3.3E-09 1.1E-13 110.5 11.7 117 308-435 188-338 (352)
157 2plw_A Ribosomal RNA methyltra 98.9 2.5E-09 8.4E-14 101.1 9.1 92 309-412 23-156 (201)
158 2bm8_A Cephalosporin hydroxyla 98.9 7.7E-10 2.6E-14 110.1 5.9 115 309-432 82-213 (236)
159 3u81_A Catechol O-methyltransf 98.9 7.3E-09 2.5E-13 100.5 12.6 97 309-412 59-172 (221)
160 1ws6_A Methyltransferase; stru 98.9 4.6E-10 1.6E-14 102.5 3.8 97 309-413 42-150 (171)
161 1u2z_A Histone-lysine N-methyl 98.9 2E-09 7E-14 117.6 9.6 102 308-411 242-360 (433)
162 2esr_A Methyltransferase; stru 98.9 6E-10 2.1E-14 103.5 4.5 98 309-413 32-141 (177)
163 2wa2_A Non-structural protein 98.9 7.3E-10 2.5E-14 113.9 5.4 97 308-412 82-195 (276)
164 3bwc_A Spermidine synthase; SA 98.9 3.2E-09 1.1E-13 109.6 10.2 120 308-433 95-235 (304)
165 2nyu_A Putative ribosomal RNA 98.9 1.8E-09 6.1E-14 101.5 7.5 94 308-412 22-147 (196)
166 1i1n_A Protein-L-isoaspartate 98.9 1.2E-09 4.2E-14 105.5 6.4 93 308-412 77-184 (226)
167 2oxt_A Nucleoside-2'-O-methylt 98.9 8.2E-10 2.8E-14 112.8 5.4 97 308-412 74-187 (265)
168 1fp1_D Isoliquiritigenin 2'-O- 98.9 5.1E-09 1.7E-13 110.0 11.0 92 308-410 209-306 (372)
169 3bzb_A Uncharacterized protein 98.9 7.1E-09 2.4E-13 105.3 11.8 121 309-435 80-234 (281)
170 3ntv_A MW1564 protein; rossman 98.9 4E-09 1.4E-13 103.7 9.3 93 309-410 72-176 (232)
171 4a6d_A Hydroxyindole O-methylt 98.9 3E-08 1E-12 104.2 16.1 139 308-455 179-350 (353)
172 1o54_A SAM-dependent O-methylt 98.9 6.8E-09 2.3E-13 104.3 10.6 113 308-434 112-235 (277)
173 2ozv_A Hypothetical protein AT 98.9 7.5E-09 2.6E-13 104.0 10.8 115 309-432 37-188 (260)
174 2pjd_A Ribosomal RNA small sub 98.9 2E-09 6.7E-14 112.5 6.7 97 309-412 197-305 (343)
175 3c3p_A Methyltransferase; NP_9 98.9 4.2E-09 1.4E-13 101.1 8.5 93 309-411 57-161 (210)
176 3duw_A OMT, O-methyltransferas 98.9 2.2E-08 7.6E-13 96.4 13.5 94 309-411 59-168 (223)
177 1o9g_A RRNA methyltransferase; 98.9 2.3E-09 7.8E-14 106.0 6.6 98 309-412 52-216 (250)
178 3tr6_A O-methyltransferase; ce 98.8 3E-09 1E-13 102.5 7.1 94 309-411 65-175 (225)
179 2p41_A Type II methyltransfera 98.8 3.5E-09 1.2E-13 110.2 8.0 101 308-413 82-194 (305)
180 3fzg_A 16S rRNA methylase; met 98.8 1.7E-09 5.7E-14 107.5 4.9 118 308-432 49-182 (200)
181 3tm4_A TRNA (guanine N2-)-meth 98.8 1.5E-08 5.1E-13 107.5 12.5 134 308-453 217-367 (373)
182 3p9c_A Caffeic acid O-methyltr 98.8 5.1E-09 1.8E-13 110.4 8.6 118 308-435 201-350 (364)
183 4dcm_A Ribosomal RNA large sub 98.8 7.6E-09 2.6E-13 110.4 9.9 109 294-412 212-336 (375)
184 2yxe_A Protein-L-isoaspartate 98.8 6.9E-09 2.4E-13 99.3 8.7 93 308-413 77-180 (215)
185 2yvl_A TRMI protein, hypotheti 98.8 2.1E-08 7.3E-13 97.5 12.2 112 308-433 91-210 (248)
186 1dl5_A Protein-L-isoaspartate 98.8 5.6E-09 1.9E-13 107.7 8.5 93 308-412 75-177 (317)
187 3r3h_A O-methyltransferase, SA 98.8 7.2E-09 2.5E-13 103.5 9.0 98 309-411 61-171 (242)
188 2b25_A Hypothetical protein; s 98.8 4.2E-09 1.4E-13 109.0 7.1 94 308-412 105-221 (336)
189 1ixk_A Methyltransferase; open 98.8 1.4E-08 4.7E-13 105.4 10.8 121 308-433 118-270 (315)
190 3b3j_A Histone-arginine methyl 98.8 8.1E-09 2.8E-13 113.8 9.3 113 290-409 144-262 (480)
191 3a27_A TYW2, uncharacterized p 98.8 9.4E-09 3.2E-13 104.3 9.1 118 308-432 119-245 (272)
192 2hnk_A SAM-dependent O-methylt 98.8 1.5E-08 5E-13 99.5 10.0 93 309-410 61-181 (239)
193 3dou_A Ribosomal RNA large sub 98.8 1E-08 3.5E-13 99.1 8.4 112 308-433 25-159 (191)
194 4hc4_A Protein arginine N-meth 98.8 2.2E-08 7.4E-13 107.7 11.8 113 290-409 69-188 (376)
195 2pbf_A Protein-L-isoaspartate 98.8 3.8E-09 1.3E-13 102.1 4.9 93 308-412 80-195 (227)
196 2h00_A Methyltransferase 10 do 98.8 3.5E-09 1.2E-13 104.5 4.6 96 309-409 66-191 (254)
197 1jg1_A PIMT;, protein-L-isoasp 98.8 1.7E-08 5.8E-13 98.9 9.5 93 308-413 91-192 (235)
198 2gpy_A O-methyltransferase; st 98.8 6.7E-09 2.3E-13 101.2 6.5 94 309-411 55-161 (233)
199 1r18_A Protein-L-isoaspartate( 98.8 6E-09 2E-13 101.3 6.1 92 308-412 84-196 (227)
200 3lec_A NADB-rossmann superfami 98.7 5.5E-08 1.9E-12 98.3 12.5 130 293-436 12-147 (230)
201 2yxl_A PH0851 protein, 450AA l 98.7 5.9E-08 2E-12 105.5 13.5 121 308-433 259-414 (450)
202 2igt_A SAM dependent methyltra 98.7 1.4E-08 4.7E-13 106.8 8.2 120 309-433 154-299 (332)
203 4azs_A Methyltransferase WBDD; 98.7 5.6E-09 1.9E-13 116.7 4.9 97 308-410 66-173 (569)
204 3adn_A Spermidine synthase; am 98.7 4.5E-08 1.5E-12 101.3 11.1 98 308-411 83-199 (294)
205 3gnl_A Uncharacterized protein 98.7 5.7E-08 2E-12 99.0 11.4 125 293-435 12-146 (244)
206 1zg3_A Isoflavanone 4'-O-methy 98.7 3.2E-08 1.1E-12 103.2 9.8 116 309-435 194-344 (358)
207 1sqg_A SUN protein, FMU protei 98.7 1.1E-07 3.8E-12 102.5 14.1 124 308-432 246-398 (429)
208 3kr9_A SAM-dependent methyltra 98.7 5.6E-08 1.9E-12 97.8 10.9 129 293-436 6-141 (225)
209 1sui_A Caffeoyl-COA O-methyltr 98.7 2.9E-08 1E-12 99.3 8.6 93 309-410 80-190 (247)
210 2qm3_A Predicted methyltransfe 98.7 1.1E-07 3.7E-12 100.7 13.2 117 309-433 173-304 (373)
211 2o07_A Spermidine synthase; st 98.7 7.8E-08 2.7E-12 99.8 11.7 98 308-411 95-210 (304)
212 3cbg_A O-methyltransferase; cy 98.7 3.6E-08 1.2E-12 97.0 8.6 94 309-411 73-183 (232)
213 3giw_A Protein of unknown func 98.7 2E-08 6.7E-13 104.3 6.9 114 290-412 63-202 (277)
214 1ne2_A Hypothetical protein TA 98.7 1E-07 3.4E-12 90.6 11.2 107 309-429 52-162 (200)
215 2avd_A Catechol-O-methyltransf 98.6 4.4E-08 1.5E-12 94.5 7.8 97 309-410 70-179 (229)
216 1xj5_A Spermidine synthase 1; 98.6 4.3E-08 1.5E-12 103.4 8.0 99 308-412 120-237 (334)
217 1nv8_A HEMK protein; class I a 98.6 1.5E-07 5.3E-12 96.3 11.9 110 309-428 124-264 (284)
218 1iy9_A Spermidine synthase; ro 98.6 2E-07 6.7E-12 95.1 12.4 99 308-412 75-191 (275)
219 2b2c_A Spermidine synthase; be 98.6 6.9E-08 2.4E-12 100.9 9.1 99 308-412 108-224 (314)
220 1wy7_A Hypothetical protein PH 98.6 5E-07 1.7E-11 85.8 14.0 114 308-433 49-170 (207)
221 1uir_A Polyamine aminopropyltr 98.6 4.1E-08 1.4E-12 102.0 6.9 97 308-410 77-195 (314)
222 1inl_A Spermidine synthase; be 98.6 7.8E-08 2.7E-12 99.1 8.6 99 308-412 90-207 (296)
223 2i7c_A Spermidine synthase; tr 98.6 1.1E-07 3.7E-12 97.3 9.5 99 308-412 78-194 (283)
224 2cmg_A Spermidine synthase; tr 98.6 8.6E-08 2.9E-12 97.6 8.7 91 308-412 72-173 (262)
225 2pt6_A Spermidine synthase; tr 98.6 7.3E-08 2.5E-12 100.7 8.0 99 308-412 116-232 (321)
226 2b78_A Hypothetical protein SM 98.6 2.4E-07 8.2E-12 98.9 12.0 122 309-431 213-355 (385)
227 3ajd_A Putative methyltransfer 98.6 3.6E-08 1.2E-12 99.8 5.3 115 308-427 83-229 (274)
228 3gjy_A Spermidine synthase; AP 98.6 7.9E-08 2.7E-12 101.3 8.1 97 310-411 91-201 (317)
229 3c3y_A Pfomt, O-methyltransfer 98.5 1.1E-07 3.8E-12 94.1 8.0 93 309-410 71-181 (237)
230 2f8l_A Hypothetical protein LM 98.5 5.5E-07 1.9E-11 93.9 13.5 138 308-451 130-305 (344)
231 3m6w_A RRNA methylase; rRNA me 98.5 6.8E-08 2.3E-12 106.5 6.7 121 308-433 101-254 (464)
232 4dmg_A Putative uncharacterize 98.5 3E-07 1E-11 99.1 10.7 99 309-412 215-328 (393)
233 2yx1_A Hypothetical protein MJ 98.5 6E-07 2.1E-11 93.9 12.6 93 309-411 196-292 (336)
234 1zq9_A Probable dimethyladenos 98.5 1.4E-07 4.9E-12 96.5 7.6 92 308-407 28-144 (285)
235 1mjf_A Spermidine synthase; sp 98.5 1.3E-07 4.5E-12 96.4 6.0 97 308-411 75-194 (281)
236 3lcv_B Sisomicin-gentamicin re 98.4 8.8E-07 3E-11 91.9 11.7 117 308-432 132-266 (281)
237 2frx_A Hypothetical protein YE 98.4 3.4E-07 1.2E-11 101.0 9.1 115 309-428 118-265 (479)
238 3k6r_A Putative transferase PH 98.4 1.1E-06 3.7E-11 90.9 12.1 145 276-433 99-252 (278)
239 2xyq_A Putative 2'-O-methyl tr 98.4 5.2E-07 1.8E-11 93.9 9.7 110 308-433 63-192 (290)
240 3v97_A Ribosomal RNA large sub 98.4 2.8E-07 9.7E-12 106.0 8.3 115 309-431 540-675 (703)
241 3c0k_A UPF0064 protein YCCW; P 98.4 4.5E-07 1.5E-11 96.6 9.2 121 309-430 221-362 (396)
242 2as0_A Hypothetical protein PH 98.4 1.5E-07 5.1E-12 100.1 5.1 104 309-413 218-338 (396)
243 1wxx_A TT1595, hypothetical pr 98.4 1.4E-07 4.6E-12 100.2 4.4 120 309-429 210-347 (382)
244 3frh_A 16S rRNA methylase; met 98.4 1.9E-06 6.5E-11 88.4 12.3 132 308-450 105-251 (253)
245 3m4x_A NOL1/NOP2/SUN family pr 98.4 3.2E-07 1.1E-11 100.9 6.8 125 308-433 105-258 (456)
246 2ih2_A Modification methylase 98.4 2.1E-06 7.1E-11 90.6 12.2 114 309-432 40-188 (421)
247 1uwv_A 23S rRNA (uracil-5-)-me 98.4 7.2E-06 2.5E-10 88.7 16.7 128 290-434 272-410 (433)
248 2okc_A Type I restriction enzy 98.3 5.7E-06 1.9E-10 89.6 14.4 137 309-451 172-357 (445)
249 3evf_A RNA-directed RNA polyme 98.3 4E-06 1.4E-10 87.0 12.0 127 284-416 54-190 (277)
250 2jjq_A Uncharacterized RNA met 98.2 3.1E-06 1.1E-10 91.9 10.9 99 309-414 291-391 (425)
251 2h1r_A Dimethyladenosine trans 98.2 4E-06 1.4E-10 86.4 10.0 65 308-379 42-113 (299)
252 3b5i_A S-adenosyl-L-methionine 98.2 2.6E-06 9.1E-11 91.6 7.9 102 309-411 53-226 (374)
253 1qam_A ERMC' methyltransferase 98.1 1.2E-06 4.1E-11 87.6 4.5 76 292-376 18-99 (244)
254 1yub_A Ermam, rRNA methyltrans 98.0 2E-07 7E-12 92.5 -3.3 97 308-411 29-146 (245)
255 3bt7_A TRNA (uracil-5-)-methyl 97.9 9.2E-05 3.1E-09 78.3 12.8 94 310-411 215-327 (369)
256 2efj_A 3,7-dimethylxanthine me 97.9 1.5E-05 5.2E-10 86.1 6.7 102 309-411 53-226 (384)
257 3ldg_A Putative uncharacterize 97.8 8.5E-05 2.9E-09 79.8 12.2 101 308-414 194-347 (384)
258 3dmg_A Probable ribosomal RNA 97.8 0.0002 6.9E-09 76.7 15.0 283 310-650 47-341 (381)
259 3ldu_A Putative methylase; str 97.8 3.3E-05 1.1E-09 82.7 8.9 101 308-414 195-348 (385)
260 3gru_A Dimethyladenosine trans 97.8 3.7E-05 1.3E-09 80.0 8.9 67 308-379 50-121 (295)
261 2qfm_A Spermine synthase; sper 97.8 1.7E-05 5.8E-10 85.2 6.4 115 290-412 173-316 (364)
262 3k0b_A Predicted N6-adenine-sp 97.8 6.9E-05 2.4E-09 80.7 10.4 98 308-414 201-354 (393)
263 4dcm_A Ribosomal RNA large sub 97.7 0.00051 1.8E-08 73.2 16.0 96 310-412 40-138 (375)
264 2b9e_A NOL1/NOP2/SUN domain fa 97.7 0.00017 5.7E-09 75.3 11.9 119 308-428 102-253 (309)
265 2ar0_A M.ecoki, type I restric 97.7 4.7E-05 1.6E-09 85.1 6.9 139 309-452 170-363 (541)
266 1m6e_X S-adenosyl-L-methionnin 97.7 3.1E-05 1.1E-09 83.0 5.1 99 309-410 52-209 (359)
267 2dul_A N(2),N(2)-dimethylguano 97.5 3.8E-05 1.3E-09 82.3 3.9 96 309-410 48-164 (378)
268 3tqs_A Ribosomal RNA small sub 97.5 0.00014 4.9E-09 73.8 7.9 64 308-376 29-101 (255)
269 3dlc_A Putative S-adenosyl-L-m 97.5 5.3E-05 1.8E-09 71.2 4.2 95 549-649 46-148 (219)
270 3fut_A Dimethyladenosine trans 97.5 0.00016 5.5E-09 74.3 7.5 64 311-379 49-117 (271)
271 3e8s_A Putative SAM dependent 97.5 7.6E-05 2.6E-09 70.6 4.7 129 548-684 54-226 (227)
272 3khk_A Type I restriction-modi 97.5 0.00018 6.1E-09 80.7 8.2 137 311-452 247-447 (544)
273 3hnr_A Probable methyltransfer 97.4 0.00013 4.4E-09 69.5 5.8 132 548-685 47-212 (220)
274 1kpg_A CFA synthase;, cyclopro 97.4 4.6E-05 1.6E-09 76.0 2.5 107 536-649 56-168 (287)
275 3v97_A Ribosomal RNA large sub 97.4 0.00057 2E-08 78.7 11.8 121 548-671 541-679 (703)
276 2zfu_A Nucleomethylin, cerebra 97.4 0.00031 1.1E-08 66.9 7.8 119 548-685 69-191 (215)
277 3axs_A Probable N(2),N(2)-dime 97.4 0.00011 3.8E-09 79.4 5.1 96 309-410 53-158 (392)
278 4gqb_A Protein arginine N-meth 97.3 0.00033 1.1E-08 80.2 8.6 94 309-407 358-464 (637)
279 1qyr_A KSGA, high level kasuga 97.3 0.00029 9.8E-09 71.4 7.0 66 308-379 21-97 (252)
280 2wk1_A NOVP; transferase, O-me 97.3 0.0017 5.8E-08 67.4 12.7 137 308-451 106-281 (282)
281 3pfg_A N-methyltransferase; N, 97.3 0.00013 4.4E-09 71.9 4.1 96 548-648 52-150 (263)
282 4fzv_A Putative methyltransfer 97.3 0.00022 7.4E-09 76.4 6.1 101 308-410 148-284 (359)
283 3dh0_A SAM dependent methyltra 97.3 6.4E-05 2.2E-09 71.5 1.5 132 548-685 39-193 (219)
284 3grz_A L11 mtase, ribosomal pr 97.3 0.00031 1E-08 66.6 6.1 115 548-671 62-182 (205)
285 3ll7_A Putative methyltransfer 97.3 0.0002 7E-09 77.9 5.4 100 309-413 94-212 (410)
286 3ftd_A Dimethyladenosine trans 97.2 0.0012 4.1E-08 66.6 10.5 70 292-370 19-92 (249)
287 3i9f_A Putative type 11 methyl 97.2 0.0002 6.9E-09 65.5 4.1 126 547-685 18-160 (170)
288 3gcz_A Polyprotein; flavivirus 97.2 0.00032 1.1E-08 73.1 5.9 104 309-414 91-205 (282)
289 3uzu_A Ribosomal RNA small sub 97.2 0.00036 1.2E-08 71.8 6.2 58 308-370 42-106 (279)
290 3h2b_A SAM-dependent methyltra 97.2 0.00024 8.3E-09 66.9 4.3 131 548-684 43-194 (203)
291 1xtp_A LMAJ004091AAA; SGPP, st 97.2 5.3E-05 1.8E-09 73.6 -0.5 120 546-669 93-233 (254)
292 3cgg_A SAM-dependent methyltra 97.1 0.00029 1E-08 64.8 4.4 118 548-671 48-172 (195)
293 3ofk_A Nodulation protein S; N 97.1 0.00011 3.9E-09 69.8 1.8 100 545-649 50-154 (216)
294 3lkd_A Type I restriction-modi 97.1 0.0012 3.9E-08 74.2 10.0 118 308-430 221-381 (542)
295 2p7i_A Hypothetical protein; p 97.1 7.5E-05 2.6E-09 71.5 0.3 93 549-649 45-141 (250)
296 2o57_A Putative sarcosine dime 97.1 0.00015 5.1E-09 72.6 2.5 95 548-649 84-187 (297)
297 3kkz_A Uncharacterized protein 97.1 7.8E-05 2.7E-09 73.7 0.3 96 547-649 47-150 (267)
298 2xvm_A Tellurite resistance pr 97.1 0.00015 5.1E-09 67.5 2.2 114 548-670 34-169 (199)
299 3f4k_A Putative methyltransfer 97.1 4.8E-05 1.7E-09 74.2 -1.3 93 548-649 48-150 (257)
300 2r6z_A UPF0341 protein in RSP 97.1 0.00019 6.4E-09 72.9 2.9 72 309-380 84-169 (258)
301 1xxl_A YCGJ protein; structura 97.1 0.00013 4.4E-09 71.2 1.6 105 536-649 13-124 (239)
302 3dli_A Methyltransferase; PSI- 97.1 5.2E-05 1.8E-09 73.8 -1.5 95 548-649 43-140 (240)
303 1dus_A MJ0882; hypothetical pr 97.1 0.0001 3.4E-09 67.8 0.5 129 548-684 54-193 (194)
304 2fk8_A Methoxy mycolic acid sy 97.1 0.00017 5.8E-09 73.3 2.1 106 537-649 83-194 (318)
305 3jwg_A HEN1, methyltransferase 97.1 0.00032 1.1E-08 67.0 4.0 135 547-685 30-210 (219)
306 3ou2_A SAM-dependent methyltra 97.0 0.00047 1.6E-08 65.0 5.0 96 548-650 48-147 (218)
307 3bus_A REBM, methyltransferase 97.0 0.00014 4.8E-09 71.6 1.4 103 538-649 55-166 (273)
308 4hg2_A Methyltransferase type 97.0 0.00014 4.8E-09 73.6 1.3 93 548-648 41-134 (257)
309 3cc8_A Putative methyltransfer 97.0 0.00014 4.7E-09 68.9 1.0 95 547-649 33-130 (230)
310 3s1s_A Restriction endonucleas 97.0 0.0037 1.3E-07 73.5 13.0 143 309-451 322-517 (878)
311 1nkv_A Hypothetical protein YJ 97.0 7.9E-05 2.7E-09 72.6 -0.8 93 548-649 38-140 (256)
312 3eld_A Methyltransferase; flav 97.0 0.0012 4.2E-08 69.2 8.0 105 308-414 81-195 (300)
313 1vl5_A Unknown conserved prote 97.0 0.00014 4.6E-09 71.6 0.7 97 546-649 37-140 (260)
314 3ujc_A Phosphoethanolamine N-m 97.0 0.0001 3.5E-09 71.7 -0.2 97 547-649 56-159 (266)
315 1y8c_A S-adenosylmethionine-de 97.0 0.00062 2.1E-08 65.2 4.9 114 525-647 20-140 (246)
316 2qy6_A UPF0209 protein YFCK; s 97.0 0.0013 4.5E-08 66.9 7.6 55 372-435 173-232 (257)
317 4e2x_A TCAB9; kijanose, tetron 96.9 9E-05 3.1E-09 78.5 -1.1 138 523-669 83-248 (416)
318 3sm3_A SAM-dependent methyltra 96.9 0.00016 5.5E-09 68.8 0.5 98 548-649 32-141 (235)
319 2i62_A Nicotinamide N-methyltr 96.9 0.00035 1.2E-08 68.0 2.8 122 546-669 56-234 (265)
320 1m6y_A S-adenosyl-methyltransf 96.9 0.00032 1.1E-08 73.1 2.7 39 309-352 27-69 (301)
321 3bxo_A N,N-dimethyltransferase 96.9 0.00039 1.4E-08 66.6 2.9 98 547-649 41-141 (239)
322 4auk_A Ribosomal RNA large sub 96.9 0.0041 1.4E-07 67.2 10.7 84 308-403 211-296 (375)
323 3l8d_A Methyltransferase; stru 96.9 0.00022 7.5E-09 68.7 0.8 115 548-669 55-195 (242)
324 3thr_A Glycine N-methyltransfe 96.9 0.00015 5.3E-09 72.2 -0.3 97 548-649 59-175 (293)
325 3mgg_A Methyltransferase; NYSG 96.8 0.00016 5.5E-09 71.5 -0.2 95 548-649 39-142 (276)
326 3hm2_A Precorrin-6Y C5,15-meth 96.8 0.0014 4.9E-08 59.8 6.2 112 547-668 26-147 (178)
327 2yqz_A Hypothetical protein TT 96.8 0.00026 9E-09 68.8 1.3 94 547-648 40-140 (263)
328 3hem_A Cyclopropane-fatty-acyl 96.8 0.00019 6.3E-09 72.6 0.1 103 537-649 65-183 (302)
329 3ege_A Putative methyltransfer 96.8 0.00039 1.3E-08 68.9 2.3 95 547-649 35-130 (261)
330 4dzr_A Protein-(glutamine-N5) 96.8 0.00057 1.9E-08 64.0 3.3 156 523-685 12-205 (215)
331 3cvo_A Methyltransferase-like 96.8 0.0043 1.5E-07 61.5 9.5 93 309-410 31-154 (202)
332 3e23_A Uncharacterized protein 96.8 0.00018 6.1E-09 68.3 -0.4 115 548-669 45-177 (211)
333 4htf_A S-adenosylmethionine-de 96.8 0.00021 7E-09 71.4 -0.1 95 548-649 70-173 (285)
334 1xdz_A Methyltransferase GIDB; 96.8 0.0018 6.1E-08 63.5 6.6 129 548-687 72-221 (240)
335 3gu3_A Methyltransferase; alph 96.8 0.00022 7.5E-09 71.7 0.1 98 546-651 22-128 (284)
336 3g5l_A Putative S-adenosylmeth 96.8 0.00029 1E-08 68.7 0.9 96 547-648 45-144 (253)
337 3ccf_A Cyclopropane-fatty-acyl 96.7 0.00053 1.8E-08 68.3 2.7 95 547-649 58-154 (279)
338 3eey_A Putative rRNA methylase 96.7 0.00042 1.5E-08 65.0 1.8 135 549-686 25-189 (197)
339 1l3i_A Precorrin-6Y methyltran 96.7 0.00066 2.3E-08 62.2 2.8 112 548-670 35-156 (192)
340 2gs9_A Hypothetical protein TT 96.7 0.00033 1.1E-08 66.3 0.8 93 548-649 38-132 (211)
341 3ocj_A Putative exported prote 96.7 0.00065 2.2E-08 68.9 2.6 134 548-685 120-304 (305)
342 1jsx_A Glucose-inhibited divis 96.7 0.00042 1.4E-08 65.4 1.1 124 548-685 67-205 (207)
343 3vc1_A Geranyl diphosphate 2-C 96.6 0.00051 1.7E-08 69.9 1.7 104 536-649 108-221 (312)
344 3e05_A Precorrin-6Y C5,15-meth 96.6 0.00062 2.1E-08 64.6 2.1 119 540-670 36-164 (204)
345 3o4f_A Spermidine synthase; am 96.6 0.023 7.8E-07 59.4 13.9 114 291-412 68-200 (294)
346 2ex4_A Adrenal gland protein A 96.6 0.00027 9.2E-09 68.8 -0.6 120 547-670 80-221 (241)
347 3ua3_A Protein arginine N-meth 96.6 0.0026 9E-08 73.6 7.4 115 290-407 390-531 (745)
348 3g5t_A Trans-aconitate 3-methy 96.6 0.00053 1.8E-08 69.1 1.4 94 546-647 36-147 (299)
349 3bkw_A MLL3908 protein, S-aden 96.6 0.00049 1.7E-08 66.1 1.1 97 547-649 44-144 (243)
350 1ej0_A FTSJ; methyltransferase 96.5 0.0015 5E-08 58.6 3.7 128 548-685 24-178 (180)
351 2kw5_A SLR1183 protein; struct 96.5 0.00074 2.5E-08 63.5 1.5 94 549-649 32-131 (202)
352 2pxx_A Uncharacterized protein 96.4 0.00068 2.3E-08 63.6 1.1 119 548-671 44-182 (215)
353 3ntv_A MW1564 protein; rossman 96.4 0.0015 5.2E-08 63.8 3.6 129 547-685 72-231 (232)
354 1qzz_A RDMB, aclacinomycin-10- 96.4 0.0012 4E-08 68.6 2.9 133 545-685 181-356 (374)
355 4fsd_A Arsenic methyltransfera 96.4 0.00048 1.6E-08 72.8 -0.1 96 548-649 85-203 (383)
356 1vlm_A SAM-dependent methyltra 96.4 0.00047 1.6E-08 66.3 -0.4 111 548-669 49-183 (219)
357 3m33_A Uncharacterized protein 96.4 0.0019 6.6E-08 62.5 3.9 107 548-667 50-160 (226)
358 3d2l_A SAM-dependent methyltra 96.4 0.00043 1.5E-08 66.5 -0.8 94 548-648 35-136 (243)
359 2plw_A Ribosomal RNA methyltra 96.4 0.0025 8.7E-08 59.8 4.5 78 607-684 105-195 (201)
360 3evz_A Methyltransferase; NYSG 96.4 0.0019 6.4E-08 62.1 3.6 121 548-671 57-203 (230)
361 2avn_A Ubiquinone/menaquinone 96.4 0.00074 2.5E-08 66.7 0.8 97 547-649 55-152 (260)
362 3lcc_A Putative methyl chlorid 96.3 0.0038 1.3E-07 60.3 5.6 117 548-671 68-204 (235)
363 2nxc_A L11 mtase, ribosomal pr 96.3 0.0014 4.8E-08 65.4 2.6 112 548-671 122-241 (254)
364 3q7e_A Protein arginine N-meth 96.3 0.0013 4.5E-08 69.0 2.5 98 548-648 68-172 (349)
365 3r3h_A O-methyltransferase, SA 96.3 0.0018 6.3E-08 64.3 3.4 130 547-685 61-220 (242)
366 2p35_A Trans-aconitate 2-methy 96.3 0.00051 1.7E-08 66.8 -0.6 94 548-649 35-132 (259)
367 2b3t_A Protein methyltransfera 96.3 0.0019 6.4E-08 64.8 3.4 133 548-684 111-275 (276)
368 3gwz_A MMCR; methyltransferase 96.3 0.0019 6.4E-08 67.9 3.4 135 543-685 199-369 (369)
369 2frn_A Hypothetical protein PH 96.3 0.0021 7.1E-08 65.1 3.6 112 548-670 127-253 (278)
370 3dp7_A SAM-dependent methyltra 96.3 0.00074 2.5E-08 70.8 0.3 98 546-649 179-287 (363)
371 3q87_B N6 adenine specific DNA 96.3 0.0075 2.6E-07 56.2 7.1 125 549-683 26-160 (170)
372 3tr6_A O-methyltransferase; ce 96.2 0.00063 2.2E-08 65.2 -0.5 126 548-685 66-224 (225)
373 2p8j_A S-adenosylmethionine-de 96.2 0.00061 2.1E-08 64.1 -0.7 97 548-649 25-128 (209)
374 3m70_A Tellurite resistance pr 96.2 0.00099 3.4E-08 66.4 0.8 115 548-671 122-257 (286)
375 1ri5_A MRNA capping enzyme; me 96.2 0.0006 2.1E-08 67.5 -0.8 99 548-649 66-174 (298)
376 3mti_A RRNA methylase; SAM-dep 96.2 0.0017 5.8E-08 60.3 2.2 133 548-684 24-183 (185)
377 2oyr_A UPF0341 protein YHIQ; a 96.2 0.0016 5.6E-08 66.5 2.1 93 310-404 90-194 (258)
378 3dtn_A Putative methyltransfer 96.2 0.00032 1.1E-08 67.5 -3.0 96 548-649 46-148 (234)
379 3lpm_A Putative methyltransfer 96.1 0.0039 1.3E-07 61.8 4.7 120 548-670 51-197 (259)
380 3tfw_A Putative O-methyltransf 96.1 0.0023 7.9E-08 63.4 3.0 129 547-685 64-225 (248)
381 3duw_A OMT, O-methyltransferas 96.1 0.00085 2.9E-08 64.3 -0.2 128 548-685 60-222 (223)
382 3lst_A CALO1 methyltransferase 96.1 0.0013 4.5E-08 68.3 1.1 98 543-649 181-286 (348)
383 1ve3_A Hypothetical protein PH 96.1 0.00095 3.3E-08 63.4 -0.0 97 548-650 40-143 (227)
384 3u81_A Catechol O-methyltransf 96.1 0.00099 3.4E-08 64.3 0.0 129 547-685 59-213 (221)
385 2yxd_A Probable cobalt-precorr 96.1 0.0036 1.2E-07 56.9 3.8 109 548-671 37-154 (183)
386 1yzh_A TRNA (guanine-N(7)-)-me 96.0 0.0019 6.4E-08 61.9 1.7 118 548-669 43-177 (214)
387 2ip2_A Probable phenazine-spec 96.0 0.002 6.7E-08 66.0 1.9 129 548-684 169-333 (334)
388 1g6q_1 HnRNP arginine N-methyl 96.0 0.002 6.8E-08 66.9 1.9 97 548-647 40-143 (328)
389 1tw3_A COMT, carminomycin 4-O- 96.0 0.0026 8.9E-08 65.7 2.6 133 545-685 182-356 (360)
390 1wzn_A SAM-dependent methyltra 96.0 0.0026 9E-08 61.8 2.4 95 547-648 42-144 (252)
391 3g89_A Ribosomal RNA small sub 96.0 0.0044 1.5E-07 62.1 4.1 157 523-689 57-233 (249)
392 3hp7_A Hemolysin, putative; st 95.9 0.028 9.5E-07 58.5 10.1 126 548-684 87-249 (291)
393 2k4m_A TR8_protein, UPF0146 pr 95.9 0.013 4.6E-07 56.0 7.0 80 309-410 36-121 (153)
394 3bgv_A MRNA CAP guanine-N7 met 95.9 0.0013 4.6E-08 66.7 0.1 100 547-649 35-155 (313)
395 3i53_A O-methyltransferase; CO 95.9 0.0017 6E-08 66.6 0.9 132 543-684 166-331 (332)
396 3ufb_A Type I restriction-modi 95.8 0.14 4.7E-06 57.2 15.9 133 293-430 206-385 (530)
397 3g2m_A PCZA361.24; SAM-depende 95.8 0.00082 2.8E-08 67.7 -1.8 95 549-649 85-190 (299)
398 3c3p_A Methyltransferase; NP_9 95.8 0.003 1E-07 60.2 2.0 91 548-649 58-160 (210)
399 3jwh_A HEN1; methyltransferase 95.8 0.0019 6.5E-08 61.6 0.6 100 548-652 31-144 (217)
400 3opn_A Putative hemolysin; str 95.8 0.026 9.1E-07 56.0 8.8 126 548-685 39-202 (232)
401 1zx0_A Guanidinoacetate N-meth 95.8 0.0012 4E-08 64.3 -1.0 99 548-649 62-170 (236)
402 3r0q_C Probable protein argini 95.7 0.0034 1.2E-07 66.5 2.2 97 548-648 65-168 (376)
403 2aot_A HMT, histamine N-methyl 95.7 0.0016 5.3E-08 65.7 -0.4 39 606-648 133-171 (292)
404 2px2_A Genome polyprotein [con 95.7 0.019 6.4E-07 59.4 7.6 124 284-416 53-189 (269)
405 3lkz_A Non-structural protein 95.6 0.022 7.6E-07 60.0 7.9 133 285-426 75-221 (321)
406 3mcz_A O-methyltransferase; ad 95.6 0.0013 4.5E-08 67.8 -1.2 97 547-649 180-287 (352)
407 1x19_A CRTF-related protein; m 95.6 0.0051 1.7E-07 63.9 3.0 97 545-649 189-295 (359)
408 3gdh_A Trimethylguanosine synt 95.5 0.0018 6E-08 62.9 -0.8 93 548-649 80-181 (241)
409 3njr_A Precorrin-6Y methylase; 95.5 0.0048 1.7E-07 59.4 2.1 109 548-669 57-175 (204)
410 2fca_A TRNA (guanine-N(7)-)-me 95.4 0.0072 2.5E-07 58.5 3.1 117 548-668 40-173 (213)
411 2fyt_A Protein arginine N-meth 95.4 0.011 3.8E-07 61.8 4.6 96 548-646 66-168 (340)
412 2g72_A Phenylethanolamine N-me 95.3 0.0017 5.8E-08 65.1 -1.6 62 606-668 172-250 (289)
413 2r3s_A Uncharacterized protein 95.3 0.0071 2.4E-07 61.5 2.7 133 546-684 165-334 (335)
414 2y1w_A Histone-arginine methyl 95.2 0.0096 3.3E-07 62.3 3.5 96 548-648 52-154 (348)
415 1vbf_A 231AA long hypothetical 95.2 0.003 1E-07 60.7 -0.5 89 548-650 72-166 (231)
416 2p41_A Type II methyltransfera 95.1 0.014 4.9E-07 60.5 4.5 99 548-648 84-190 (305)
417 3cbg_A O-methyltransferase; cy 95.1 0.0032 1.1E-07 61.7 -0.6 127 548-685 74-232 (232)
418 2nyu_A Putative ribosomal RNA 95.0 0.015 5E-07 54.2 3.9 78 607-684 96-186 (196)
419 3lbf_A Protein-L-isoaspartate 95.0 0.0036 1.2E-07 59.3 -0.5 88 548-649 79-174 (210)
420 2oxt_A Nucleoside-2'-O-methylt 94.9 0.0039 1.3E-07 63.5 -0.6 134 548-684 76-227 (265)
421 3iv6_A Putative Zn-dependent a 94.9 0.0048 1.7E-07 63.1 0.1 103 539-649 40-148 (261)
422 3ggd_A SAM-dependent methyltra 94.9 0.0027 9.1E-08 61.6 -1.8 96 548-649 58-163 (245)
423 3g07_A 7SK snRNA methylphospha 94.8 0.0026 8.8E-08 64.6 -2.0 45 604-649 173-220 (292)
424 3orh_A Guanidinoacetate N-meth 94.8 0.007 2.4E-07 59.6 1.0 97 548-649 62-170 (236)
425 1pjz_A Thiopurine S-methyltran 94.8 0.0018 6.1E-08 62.2 -3.2 117 548-670 24-172 (203)
426 3bkx_A SAM-dependent methyltra 94.8 0.014 4.6E-07 57.5 3.0 98 548-649 45-159 (275)
427 2avd_A Catechol-O-methyltransf 94.7 0.0047 1.6E-07 59.3 -0.4 128 547-685 70-229 (229)
428 2esr_A Methyltransferase; stru 94.7 0.0018 6E-08 59.8 -3.4 98 548-652 33-141 (177)
429 3p8z_A Mtase, non-structural p 94.7 0.077 2.6E-06 54.6 8.2 122 285-415 59-191 (267)
430 2hnk_A SAM-dependent O-methylt 94.6 0.0068 2.3E-07 59.2 0.5 71 607-686 146-232 (239)
431 2bm8_A Cephalosporin hydroxyla 94.6 0.015 5.1E-07 57.5 2.9 111 548-669 83-214 (236)
432 3dou_A Ribosomal RNA large sub 94.5 0.0076 2.6E-07 57.9 0.5 128 548-684 27-180 (191)
433 2ipx_A RRNA 2'-O-methyltransfe 94.5 0.0095 3.3E-07 57.7 1.2 135 540-684 73-231 (233)
434 4gek_A TRNA (CMO5U34)-methyltr 94.4 0.0053 1.8E-07 62.0 -0.8 97 549-649 73-178 (261)
435 1ws6_A Methyltransferase; stru 94.3 0.0025 8.5E-08 57.7 -3.1 95 548-651 43-149 (171)
436 3dr5_A Putative O-methyltransf 94.3 0.0087 3E-07 58.7 0.5 128 549-686 59-214 (221)
437 2gb4_A Thiopurine S-methyltran 94.3 0.01 3.4E-07 59.7 0.9 117 548-670 70-223 (252)
438 2gpy_A O-methyltransferase; st 94.3 0.0034 1.2E-07 60.8 -2.4 93 548-649 56-160 (233)
439 1fp1_D Isoliquiritigenin 2'-O- 94.3 0.0064 2.2E-07 63.7 -0.6 96 545-649 208-306 (372)
440 2zig_A TTHA0409, putative modi 94.2 0.058 2E-06 55.2 6.4 75 368-452 36-140 (297)
441 2vdw_A Vaccinia virus capping 94.2 0.016 5.5E-07 59.7 2.2 99 548-649 50-169 (302)
442 1i1n_A Protein-L-isoaspartate 94.2 0.0045 1.5E-07 59.4 -2.0 87 548-648 79-181 (226)
443 2vdv_E TRNA (guanine-N(7)-)-me 94.1 0.013 4.3E-07 57.7 1.1 114 548-666 51-191 (246)
444 1nv8_A HEMK protein; class I a 94.1 0.028 9.5E-07 57.4 3.6 128 549-685 126-282 (284)
445 2ozv_A Hypothetical protein AT 94.0 0.034 1.2E-06 55.6 3.9 118 547-668 37-188 (260)
446 3c3y_A Pfomt, O-methyltransfer 93.9 0.012 4E-07 58.0 0.4 129 547-686 71-237 (237)
447 3ckk_A TRNA (guanine-N(7)-)-me 93.9 0.032 1.1E-06 55.3 3.5 113 548-664 48-184 (235)
448 1p91_A Ribosomal RNA large sub 93.9 0.014 4.6E-07 57.5 0.8 87 548-649 87-178 (269)
449 2pjd_A Ribosomal RNA small sub 93.9 0.0091 3.1E-07 62.1 -0.5 129 549-685 199-337 (343)
450 2a14_A Indolethylamine N-methy 93.8 0.0075 2.6E-07 60.0 -1.2 62 606-668 154-232 (263)
451 3dxy_A TRNA (guanine-N(7)-)-me 93.8 0.009 3.1E-07 58.5 -0.7 113 548-663 36-165 (218)
452 3a27_A TYW2, uncharacterized p 93.6 0.017 5.8E-07 58.3 1.1 109 548-669 121-246 (272)
453 3p2e_A 16S rRNA methylase; met 93.6 0.02 6.7E-07 56.4 1.5 97 548-647 26-137 (225)
454 1g8a_A Fibrillarin-like PRE-rR 93.6 0.0075 2.6E-07 58.0 -1.5 103 538-648 67-177 (227)
455 3adn_A Spermidine synthase; am 93.6 0.11 3.9E-06 53.5 7.2 139 546-686 83-246 (294)
456 3fpf_A Mtnas, putative unchara 93.6 0.005 1.7E-07 64.5 -2.9 142 528-685 107-264 (298)
457 1nt2_A Fibrillarin-like PRE-rR 93.6 0.007 2.4E-07 58.9 -1.8 98 540-648 53-160 (210)
458 1boo_A Protein (N-4 cytosine-s 93.4 0.12 4E-06 53.8 7.0 66 368-433 29-115 (323)
459 1fp2_A Isoflavone O-methyltran 93.4 0.011 3.6E-07 61.4 -0.9 92 546-649 188-288 (352)
460 1mjf_A Spermidine synthase; sp 93.3 0.05 1.7E-06 55.3 3.9 134 548-685 77-239 (281)
461 2vz8_A Fatty acid synthase; tr 93.3 0.034 1.2E-06 72.4 3.3 99 309-411 1241-1349(2512)
462 2yxe_A Protein-L-isoaspartate 93.3 0.011 3.7E-07 56.1 -1.0 89 548-650 79-178 (215)
463 4a6d_A Hydroxyindole O-methylt 93.3 0.053 1.8E-06 56.7 4.1 136 542-686 175-347 (353)
464 3reo_A (ISO)eugenol O-methyltr 93.2 0.05 1.7E-06 57.2 3.8 96 544-649 201-300 (368)
465 1sui_A Caffeoyl-COA O-methyltr 93.2 0.017 5.7E-07 57.5 0.2 94 547-649 80-190 (247)
466 2ift_A Putative methylase HI07 93.2 0.012 4.1E-07 56.3 -0.9 98 549-653 56-167 (201)
467 3sso_A Methyltransferase; macr 93.1 0.014 4.6E-07 64.0 -0.7 111 547-668 217-361 (419)
468 1inl_A Spermidine synthase; be 93.1 0.053 1.8E-06 55.6 3.7 136 548-686 92-253 (296)
469 3mb5_A SAM-dependent methyltra 93.1 0.021 7E-07 55.8 0.6 104 548-665 95-211 (255)
470 3mq2_A 16S rRNA methyltransfer 93.1 0.024 8.2E-07 54.0 1.0 119 548-670 29-180 (218)
471 3c6k_A Spermine synthase; sper 93.0 0.23 8E-06 53.7 8.7 113 290-410 190-331 (381)
472 2zig_A TTHA0409, putative modi 93.0 0.066 2.2E-06 54.8 4.3 40 308-352 235-276 (297)
473 2yvl_A TRMI protein, hypotheti 93.0 0.05 1.7E-06 52.5 3.2 106 548-667 93-208 (248)
474 3p9n_A Possible methyltransfer 93.0 0.006 2.1E-07 57.1 -3.2 99 548-651 46-155 (189)
475 1iy9_A Spermidine synthase; ro 93.0 0.1 3.5E-06 52.9 5.6 139 546-686 75-237 (275)
476 2pwy_A TRNA (adenine-N(1)-)-me 92.9 0.047 1.6E-06 53.0 2.9 107 548-667 98-217 (258)
477 3p9c_A Caffeic acid O-methyltr 92.8 0.054 1.9E-06 56.9 3.3 95 545-649 200-298 (364)
478 2pbf_A Protein-L-isoaspartate 92.6 0.0076 2.6E-07 57.9 -3.2 90 548-649 82-193 (227)
479 3id6_C Fibrillarin-like rRNA/T 92.6 0.044 1.5E-06 55.0 2.2 138 540-686 72-232 (232)
480 1yb2_A Hypothetical protein TA 92.3 0.096 3.3E-06 52.3 4.3 108 548-668 112-231 (275)
481 1r18_A Protein-L-isoaspartate( 92.3 0.012 4E-07 56.9 -2.4 87 548-649 86-194 (227)
482 2fhp_A Methylase, putative; al 92.2 0.011 3.8E-07 54.3 -2.5 97 548-651 46-156 (187)
483 2wa2_A Non-structural protein 92.0 0.043 1.5E-06 56.2 1.3 91 548-648 84-192 (276)
484 2ld4_A Anamorsin; methyltransf 92.0 0.063 2.1E-06 49.4 2.3 59 605-666 60-128 (176)
485 1zg3_A Isoflavanone 4'-O-methy 91.9 0.02 6.7E-07 59.6 -1.3 94 546-649 193-293 (358)
486 1jg1_A PIMT;, protein-L-isoasp 91.9 0.022 7.7E-07 55.3 -0.9 89 548-649 93-189 (235)
487 1ixk_A Methyltransferase; open 91.8 0.045 1.5E-06 56.6 1.2 99 548-648 120-245 (315)
488 1wg8_A Predicted S-adenosylmet 91.7 0.19 6.5E-06 52.5 5.8 38 309-351 23-62 (285)
489 2xyq_A Putative 2'-O-methyl tr 91.6 0.28 9.4E-06 50.9 6.9 88 595-684 112-210 (290)
490 3b3j_A Histone-arginine methyl 91.6 0.023 7.7E-07 62.7 -1.4 94 548-647 160-261 (480)
491 3bwc_A Spermidine synthase; SA 91.4 0.05 1.7E-06 55.9 1.1 137 547-685 96-258 (304)
492 1wy7_A Hypothetical protein PH 91.4 0.09 3.1E-06 49.4 2.8 114 548-670 51-171 (207)
493 1uir_A Polyamine aminopropyltr 91.3 0.072 2.5E-06 55.1 2.1 137 547-686 78-243 (314)
494 1dl5_A Protein-L-isoaspartate 91.3 0.049 1.7E-06 55.9 0.9 98 540-650 71-176 (317)
495 3r24_A NSP16, 2'-O-methyl tran 91.3 0.45 1.6E-05 50.4 8.0 104 308-426 109-231 (344)
496 3htx_A HEN1; HEN1, small RNA m 91.2 0.046 1.6E-06 64.8 0.6 99 548-649 723-834 (950)
497 1i9g_A Hypothetical protein RV 91.0 0.13 4.5E-06 50.8 3.6 105 549-666 102-222 (280)
498 2fpo_A Methylase YHHF; structu 90.9 0.038 1.3E-06 52.8 -0.3 98 548-652 56-163 (202)
499 1o54_A SAM-dependent O-methylt 90.8 0.15 5.1E-06 50.8 3.8 107 548-667 114-232 (277)
500 2o07_A Spermidine synthase; st 90.2 0.12 4.2E-06 53.3 2.7 136 547-685 96-256 (304)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.58 E-value=2.7e-15 Score=152.30 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=78.1
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWH 386 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~ 386 (689)
..+|||||||+|.++..|+.. .|+|+|+++ .|++.|.++ ....+...+++.+||++++||+|+|+.++ ||.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~-----~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~ 112 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFERVHAVDPGE-----AQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF 112 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCSEEEEEESCH-----HHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC
T ss_pred CCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcH-----Hhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeeh-hHh
Confidence 458999999999999999875 589999875 577776543 23445567788999999999999998665 766
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 387 AHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 387 ~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
++..+|.|+.|||||||+|++....
T Consensus 113 -~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 113 -DLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -hHHHHHHHHHHHcCCCCEEEEEECC
Confidence 5778999999999999999987643
No 2
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=1.9e-14 Score=136.55 Aligned_cols=126 Identities=12% Similarity=0.054 Sum_probs=99.5
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWH 386 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~ 386 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++.....+...+...+|+++++||+|+|..++.++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPAT-----RLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCH-----HHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCH-----HHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC
Confidence 468999999999999888765 588998875 6888888875555566677788899999999999987665533
Q ss_pred -ccHHHHHHHHHhccCCCcEEEEEcCCCc-------------hhHHHHHHHHHHhcceeEEEeeccc
Q 044932 387 -AHGGKLLLEMNRILRPSGYFILSTKHDS-------------IEEEEALTTLTASICWNILAHKTDE 439 (689)
Q Consensus 387 -~d~~~aL~EI~RVLRPGG~fVIsdp~~~-------------le~~~~ie~La~~l~W~~v~~~~~~ 439 (689)
.+...+|.++.|+|||||+|++..+... ......+..+++..+|+.+......
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 3788999999999999999999874321 1234568899999999998765543
No 3
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.56 E-value=5.3e-14 Score=139.14 Aligned_cols=157 Identities=15% Similarity=0.122 Sum_probs=111.2
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCC
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLG 362 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~d 362 (689)
|...+....+.|...++ ...+|||||||+|.++..|+.. .|+++|+++ .+++.|.++.....+...+
T Consensus 33 ~~~~~~~~~~~l~~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~d 101 (263)
T 3pfg_A 33 YHREAADLAALVRRHSP------KAASLLDVACGTGMHLRHLADSFGTVEGLELSA-----DMLAIARRRNPDAVLHHGD 101 (263)
T ss_dssp HHHHHHHHHHHHHHHCT------TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCH-----HHHHHHHHHCTTSEEEECC
T ss_pred HHHHHHHHHHHHHhhCC------CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCH-----HHHHHHHhhCCCCEEEECC
Confidence 33444444444444433 3478999999999999998875 488999875 5788888774445556667
Q ss_pred CCCCCCCCCCcceEEecccccccc---ccHHHHHHHHHhccCCCcEEEEEcCC--C------------------------
Q 044932 363 NRRLPFPSGVFDAIHCDGCSITWH---AHGGKLLLEMNRILRPSGYFILSTKH--D------------------------ 413 (689)
Q Consensus 363 t~~LPFpD~SFDlVhcs~cli~W~---~d~~~aL~EI~RVLRPGG~fVIsdp~--~------------------------ 413 (689)
...+|+ +++||+|+|....+++. .+...+|.++.|+|||||+|+|.... .
T Consensus 102 ~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (263)
T 3pfg_A 102 MRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSH 180 (263)
T ss_dssp TTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEE
T ss_pred hHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEE
Confidence 778888 69999999986344544 35668899999999999999996310 0
Q ss_pred -------------c-------------------hhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCCCc
Q 044932 414 -------------S-------------------IEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPESN 454 (689)
Q Consensus 414 -------------~-------------------le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~~ 454 (689)
+ ....+++..+++..||+++..... .+...+.+.+||...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~-~~~~~~~va~K~a~~ 252 (263)
T 3pfg_A 181 SSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG-PSGRGLFTGLPGAKG 252 (263)
T ss_dssp EEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEECC--
T ss_pred EEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC-CCCceeEEEecCCCC
Confidence 0 002467999999999998765443 345668999998653
No 4
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.55 E-value=7e-14 Score=133.87 Aligned_cols=139 Identities=13% Similarity=0.108 Sum_probs=103.2
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCC-CcEEecCCCCCCCCCCCCcceEEecccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGF-PAVVSPLGNRRLPFPSGVFDAIHCDGCSIT 384 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL-~~i~~~~dt~~LPFpD~SFDlVhcs~cli~ 384 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++.. ...+...+...+|++ ++||+|+|..++ +
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l-~ 117 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSR-----EMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAF-H 117 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCH-----HHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCG-G
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCH-----HHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcch-h
Confidence 3568999999999999888865 588888875 57777777633 334556677888998 999999998654 4
Q ss_pred ccccHHH--HHHHHHhccCCCcEEEEEcCCCc----------------------------hhHHHHHHHHHHhcceeEEE
Q 044932 385 WHAHGGK--LLLEMNRILRPSGYFILSTKHDS----------------------------IEEEEALTTLTASICWNILA 434 (689)
Q Consensus 385 W~~d~~~--aL~EI~RVLRPGG~fVIsdp~~~----------------------------le~~~~ie~La~~l~W~~v~ 434 (689)
+..++.. +|.++.|+|||||++++.++... ....+.+..+++..+|+++.
T Consensus 118 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 118 HLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred cCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 4556655 99999999999999999974310 00125688999999998876
Q ss_pred eeccccCceeEEEEEeCCCch
Q 044932 435 HKTDEISEMGVKIYQKPESND 455 (689)
Q Consensus 435 ~~~~~~g~~~i~IwqKp~~~~ 455 (689)
.... +...++..+|+..++
T Consensus 198 ~~~~--~~~w~~~~~~~~~~~ 216 (220)
T 3hnr_A 198 TRLN--HFVWVMEATKQLEHH 216 (220)
T ss_dssp EECS--SSEEEEEEEECSCCC
T ss_pred eecc--ceEEEEeehhhhhhh
Confidence 5432 456678888876543
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.55 E-value=3.1e-14 Score=134.63 Aligned_cols=134 Identities=16% Similarity=0.186 Sum_probs=97.7
Q ss_pred eEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc----CCC--cEEecCCCCCCCCCCCCcceEEeccc
Q 044932 311 VVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER----GFP--AVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 311 ~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR----GL~--~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ ++. ..+...+...+|+++++||+|+|..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSK-----HMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCH-----HHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCH-----HHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECch
Confidence 8999999999998888764 588999876 355555443 543 44556677889999999999999866
Q ss_pred cccccccHHHHHHHHHhccCCCcEEEEEcCCCc---------------------------hhHHHHHHHHHHhcceeEEE
Q 044932 382 SITWHAHGGKLLLEMNRILRPSGYFILSTKHDS---------------------------IEEEEALTTLTASICWNILA 434 (689)
Q Consensus 382 li~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~---------------------------le~~~~ie~La~~l~W~~v~ 434 (689)
+.+ ..++..+|.++.|+|||||++++.+.... ....+.+..+++..+|+.+.
T Consensus 121 l~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 121 VFF-WEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp GGG-CSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred Hhh-ccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 544 57889999999999999999999853210 01225688899999998765
Q ss_pred eeccccCceeEEEEEeCC
Q 044932 435 HKTDEISEMGVKIYQKPE 452 (689)
Q Consensus 435 ~~~~~~g~~~i~IwqKp~ 452 (689)
.... ......+.+|+.
T Consensus 200 ~~~~--~~~~~~~~~k~~ 215 (219)
T 3dlc_A 200 IILG--DEGFWIIISKTD 215 (219)
T ss_dssp EEEE--TTEEEEEEBCCS
T ss_pred EEec--CCceEEEEeccc
Confidence 4332 223355556654
No 6
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.55 E-value=9.8e-15 Score=142.46 Aligned_cols=143 Identities=13% Similarity=0.095 Sum_probs=101.7
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCC---CcEE
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGF---PAVV 358 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL---~~i~ 358 (689)
+......++..+...++. ....+|||||||+|.++..|+.. .|+++|+++ .+++.|.++.. ...+
T Consensus 74 ~~~~~~~~~~~~l~~l~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~ 144 (254)
T 1xtp_A 74 VHDVDIEGSRNFIASLPG----HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVK-----HMLEEAKRELAGMPVGKF 144 (254)
T ss_dssp GHHHHHHHHHHHHHTSTT----CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCH-----HHHHHHHHHTTTSSEEEE
T ss_pred cCHHHHHHHHHHHHhhcc----cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCH-----HHHHHHHHHhccCCceEE
Confidence 333334455544444431 14579999999999998887753 489999875 57777777632 2344
Q ss_pred ecCCCCCCCCCCCCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEEcCCC-------------chhHHHHHHHH
Q 044932 359 SPLGNRRLPFPSGVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILSTKHD-------------SIEEEEALTTL 424 (689)
Q Consensus 359 ~~~dt~~LPFpD~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~~-------------~le~~~~ie~L 424 (689)
...+...+|+++++||+|+|..++.++. .+...+|.++.|+|||||+|++.++.. .....+.+..+
T Consensus 145 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T 1xtp_A 145 ILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRL 224 (254)
T ss_dssp EESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHH
T ss_pred EEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHH
Confidence 5566778899999999999987665432 357899999999999999999987410 11123568889
Q ss_pred HHhcceeEEEee
Q 044932 425 TASICWNILAHK 436 (689)
Q Consensus 425 a~~l~W~~v~~~ 436 (689)
++..+|+.+...
T Consensus 225 l~~aGf~~~~~~ 236 (254)
T 1xtp_A 225 FNESGVRVVKEA 236 (254)
T ss_dssp HHHHTCCEEEEE
T ss_pred HHHCCCEEEEee
Confidence 999999887553
No 7
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=1.5e-13 Score=127.34 Aligned_cols=139 Identities=14% Similarity=0.024 Sum_probs=100.2
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++.....+...+...+|+++++||+|+|....+++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDP-----ILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCH-----HHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 3568999999999998888754 588888875 577777776434445556667788888999999987444444
Q ss_pred c--ccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccc-------cCceeEEEEEeC
Q 044932 386 H--AHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDE-------ISEMGVKIYQKP 451 (689)
Q Consensus 386 ~--~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~-------~g~~~i~IwqKp 451 (689)
. .+...+|.++.|+|+|||++++..+.........+..+++..+|+.+...... .....+.+++|+
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 4 34578999999999999999998765432233457888889999887553320 123446666664
No 8
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.53 E-value=6.3e-14 Score=135.81 Aligned_cols=131 Identities=19% Similarity=0.222 Sum_probs=99.5
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC--CCcEEecCCCCCCCC
Q 044932 293 LESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG--FPAVVSPLGNRRLPF 368 (689)
Q Consensus 293 id~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG--L~~i~~~~dt~~LPF 368 (689)
++.+...++ ...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++. ....+...+...+|+
T Consensus 44 ~~~l~~~~~------~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 44 IPFFEQYVK------KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISE-----VMIQKGKERGEGPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHSC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHTTTCBTTEEEEECBTTBCSS
T ss_pred HHHHHHHcC------CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCH-----HHHHHHHhhcccCCceEEEcchhcCCC
Confidence 445555443 3468999999999999888865 588898875 5778887763 233455667788999
Q ss_pred CCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCch-------------------hHHHHHHHHHHhcc
Q 044932 369 PSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSI-------------------EEEEALTTLTASIC 429 (689)
Q Consensus 369 pD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~l-------------------e~~~~ie~La~~l~ 429 (689)
++++||+|+|..++. +..++..+|.++.|+|||||+|++.++.... .....+..+++..+
T Consensus 113 ~~~~fD~v~~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 191 (242)
T 3l8d_A 113 ENEQFEAIMAINSLE-WTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQG 191 (242)
T ss_dssp CTTCEEEEEEESCTT-SSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTT
T ss_pred CCCCccEEEEcChHh-hccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcC
Confidence 999999999986654 4678889999999999999999998742100 11246889999999
Q ss_pred eeEEEe
Q 044932 430 WNILAH 435 (689)
Q Consensus 430 W~~v~~ 435 (689)
|+.+..
T Consensus 192 f~~~~~ 197 (242)
T 3l8d_A 192 FKVVDG 197 (242)
T ss_dssp EEEEEE
T ss_pred CEEEEe
Confidence 998764
No 9
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.52 E-value=1.1e-13 Score=133.17 Aligned_cols=120 Identities=14% Similarity=0.051 Sum_probs=91.9
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCC-CcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGF-PAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL-~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
..+|||||||+|.++..|+.. .|+++|+++ .+++.|.++.. ...+...+...+ +++++||+|+|..++ ++
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l-~~ 115 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFNDITCVEASE-----EAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVL-EH 115 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCSCEEEEESCH-----HHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCG-GG
T ss_pred CCcEEEECCCCCHHHHHHHHhCCcEEEEeCCH-----HHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHH-Hh
Confidence 457999999999999988865 589999875 57888877643 334445565666 578999999998655 44
Q ss_pred cccHHHHHHHHH-hccCCCcEEEEEcCCCch------------------------------hHHHHHHHHHHhcceeEEE
Q 044932 386 HAHGGKLLLEMN-RILRPSGYFILSTKHDSI------------------------------EEEEALTTLTASICWNILA 434 (689)
Q Consensus 386 ~~d~~~aL~EI~-RVLRPGG~fVIsdp~~~l------------------------------e~~~~ie~La~~l~W~~v~ 434 (689)
..++..+|.++. |+|||||++++.++.... .....+..+++..+|+.+.
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 195 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTY 195 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEE
Confidence 678899999999 999999999999854210 1234688888999998875
Q ss_pred e
Q 044932 435 H 435 (689)
Q Consensus 435 ~ 435 (689)
.
T Consensus 196 ~ 196 (250)
T 2p7i_A 196 R 196 (250)
T ss_dssp E
T ss_pred E
Confidence 4
No 10
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.52 E-value=6.7e-14 Score=138.17 Aligned_cols=97 Identities=16% Similarity=0.299 Sum_probs=77.5
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
...+|||||||+|.++..|+.. .|+++|+++ .|++.|.+ .+++ ..+...+...+||++++||+|+|..
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTE-----DILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRI 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCH-----HHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCH-----HHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhh
Confidence 4579999999999999888765 589999886 45555544 3554 3455677788999999999999986
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
++ +|..++..+|.++.|+|||||+|++.+
T Consensus 112 ~l-~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 112 AA-HHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp CG-GGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hh-HhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 55 556788999999999999999999975
No 11
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.51 E-value=1.8e-13 Score=135.42 Aligned_cols=119 Identities=19% Similarity=0.254 Sum_probs=88.8
Q ss_pred cccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHH----cCCC
Q 044932 283 SEFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALE----RGFP 355 (689)
Q Consensus 283 t~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~e----RGL~ 355 (689)
..+........+.+.+.++ +. ...+|||||||+|.++..|+. ..|+++|+++. +++.|.+ .|+.
T Consensus 40 ~~~~~~~~~~~~~l~~~~~-~~---~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~ 110 (273)
T 3bus_A 40 VSVDDATDRLTDEMIALLD-VR---SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRP-----QVNQANARATAAGLA 110 (273)
T ss_dssp CCHHHHHHHHHHHHHHHSC-CC---TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHH-----HHHHHHHHHHHTTCT
T ss_pred cCHHHHHHHHHHHHHHhcC-CC---CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHH-----HHHHHHHHHHhcCCC
Confidence 3444555566666666654 22 457999999999999888764 36899998763 4555444 3554
Q ss_pred --cEEecCCCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 356 --AVVSPLGNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 356 --~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
..+...+...+||++++||+|+|..++ +|..++..+|.++.|+|||||++++.+.
T Consensus 111 ~~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 111 NRVTFSYADAMDLPFEDASFDAVWALESL-HHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp TTEEEEECCTTSCCSCTTCEEEEEEESCT-TTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cceEEEECccccCCCCCCCccEEEEechh-hhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 445566778899999999999987655 4467889999999999999999999863
No 12
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.51 E-value=1.9e-13 Score=131.95 Aligned_cols=114 Identities=13% Similarity=0.190 Sum_probs=83.7
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCC
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLG 362 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~d 362 (689)
|...+..+.+.|...++ ...+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++.....+...+
T Consensus 23 ~~~~~~~~~~~l~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~d 91 (239)
T 3bxo_A 23 YAAEASDIADLVRSRTP------EASSLLDVACGTGTHLEHFTKEFGDTAGLELSE-----DMLTHARKRLPDATLHQGD 91 (239)
T ss_dssp HHHHHHHHHHHHHHHCT------TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCH-----HHHHHHHHHCTTCEEEECC
T ss_pred HHHHHHHHHHHHHHhcC------CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCH-----HHHHHHHHhCCCCEEEECC
Confidence 33444444555554432 3578999999999998888754 589999875 5778887764334455667
Q ss_pred CCCCCCCCCCcceEEecccccccc---ccHHHHHHHHHhccCCCcEEEEEc
Q 044932 363 NRRLPFPSGVFDAIHCDGCSITWH---AHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 363 t~~LPFpD~SFDlVhcs~cli~W~---~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
...+|+ +++||+|+|+...+++. .+...+|.++.|+|||||+|++.+
T Consensus 92 ~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 92 MRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp TTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 777887 68999999876555555 355789999999999999999975
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.50 E-value=2.1e-14 Score=138.85 Aligned_cols=120 Identities=11% Similarity=-0.009 Sum_probs=84.3
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc-C----------------CCcEEecCCCCCCCCC
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER-G----------------FPAVVSPLGNRRLPFP 369 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR-G----------------L~~i~~~~dt~~LPFp 369 (689)
..+|||+|||+|.++.+|+.. .|+|+|+|+ .|++.|.++ + ....+...|...+|++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~-----~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGYHVVGAELSE-----AAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCCEEEEEEECH-----HHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCH-----HHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 468999999999999888754 599999886 577777665 1 2334556677889987
Q ss_pred C-CCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEEc--CC-------CchhHHHHHHHHHHhcceeEEE
Q 044932 370 S-GVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILST--KH-------DSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 370 D-~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsd--p~-------~~le~~~~ie~La~~l~W~~v~ 434 (689)
+ ++||+|++..++.+.. .+...++.|+.|+|||||++++.. .. .+....+++..++.. +|+...
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 6 8999999865554322 234578999999999999844332 11 111123457777777 887653
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.50 E-value=9.4e-14 Score=136.04 Aligned_cols=132 Identities=11% Similarity=0.103 Sum_probs=94.7
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHH----HcCCC--cEEecCCC
Q 044932 293 LESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVAL----ERGFP--AVVSPLGN 363 (689)
Q Consensus 293 id~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~----eRGL~--~i~~~~dt 363 (689)
...+...++.+. ...+|||+|||+|.++..|+.. .|+++|+++. +++.|. ..|+. ..+...+.
T Consensus 34 ~~~~l~~l~~~~---~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 34 TRKAVSFINELT---DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPD-----FIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp HHHHHTTSCCCC---TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHhcCC---CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHH-----HHHHHHHHHHHcCCCCceEEEECCh
Confidence 334444444332 3469999999999998888753 6999999874 444444 34655 44556777
Q ss_pred CCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC-----Cc-------------hhHHHHHHHHH
Q 044932 364 RRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH-----DS-------------IEEEEALTTLT 425 (689)
Q Consensus 364 ~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~-----~~-------------le~~~~ie~La 425 (689)
..+||++++||+|+|..++.+ . ++..+|.++.|+|||||++++.++. .. ......+..++
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~-~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (257)
T 3f4k_A 106 DNLPFQNEELDLIWSEGAIYN-I-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKM 183 (257)
T ss_dssp TSCSSCTTCEEEEEEESCSCC-C-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHH
T ss_pred hhCCCCCCCEEEEEecChHhh-c-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 889999999999999876544 3 7889999999999999999998742 00 00124577788
Q ss_pred HhcceeEEE
Q 044932 426 ASICWNILA 434 (689)
Q Consensus 426 ~~l~W~~v~ 434 (689)
+..+|+.+.
T Consensus 184 ~~aGf~~v~ 192 (257)
T 3f4k_A 184 ERAGYTPTA 192 (257)
T ss_dssp HHTTEEEEE
T ss_pred HHCCCeEEE
Confidence 888887654
No 15
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.50 E-value=2.7e-13 Score=130.72 Aligned_cols=97 Identities=15% Similarity=0.236 Sum_probs=75.2
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCCCCCCCCCCCCcceEEecc-
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLGNRRLPFPSGVFDAIHCDG- 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~dt~~LPFpD~SFDlVhcs~- 380 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++ ++...+...+...+|++ ++||+|+|..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~-----~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~ 110 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQ-----EMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLD 110 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCH-----HHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTT
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCH-----HHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCc
Confidence 3578999999999999888765 488888876 455555443 44455666677788888 8999999986
Q ss_pred cccccc---ccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 381 CSITWH---AHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 381 cli~W~---~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++ ++. .+...+|.++.|+|+|||+|++..+
T Consensus 111 ~l-~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 111 ST-NYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GG-GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cc-cccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 44 444 4678999999999999999999643
No 16
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.50 E-value=1.3e-13 Score=138.69 Aligned_cols=144 Identities=17% Similarity=0.172 Sum_probs=101.5
Q ss_pred cccchhHHHHHHHHHhhcc---cccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----c
Q 044932 283 SEFKGGVLHYLESIEEMVP---DIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----R 352 (689)
Q Consensus 283 t~F~~ga~~Yid~L~~~Lp---~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----R 352 (689)
..+........+.+...++ .+. ...+|||||||+|.++..|+.. .|+++|+++ .|++.|.+ .
T Consensus 57 ~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~ 128 (297)
T 2o57_A 57 DEIREASLRTDEWLASELAMTGVLQ---RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAP-----VQNKRNEEYNNQA 128 (297)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCCC---TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCH-----HHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhhccCCC---CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCH-----HHHHHHHHHHHhc
Confidence 3444455555666666651 222 4579999999999998887753 689999886 35555544 3
Q ss_pred CCC--cEEecCCCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCC-------ch--------
Q 044932 353 GFP--AVVSPLGNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD-------SI-------- 415 (689)
Q Consensus 353 GL~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~-------~l-------- 415 (689)
|+. ..+...+...+||++++||+|+|..++.| ..++..+|.++.|+|||||+|++.++.. ..
T Consensus 129 ~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (297)
T 2o57_A 129 GLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLH-SPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIK 207 (297)
T ss_dssp TCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHT
T ss_pred CCCcceEEEEcCcccCCCCCCCEeEEEecchhhh-cCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhc
Confidence 543 44556677889999999999999876654 5678999999999999999999986421 00
Q ss_pred ----hHHHHHHHHHHhcceeEEEe
Q 044932 416 ----EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 416 ----e~~~~ie~La~~l~W~~v~~ 435 (689)
.....+..+++..+|+.+..
T Consensus 208 ~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 208 LHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp CSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEE
Confidence 01245667788888876643
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.49 E-value=1.5e-13 Score=134.77 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=80.0
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcC--CCcEEecCCCCCCCCCCCCcceEEecccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERG--FPAVVSPLGNRRLPFPSGVFDAIHCDGCS 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRG--L~~i~~~~dt~~LPFpD~SFDlVhcs~cl 382 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++. ....+...+...+|+++++||+|+|..++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 118 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSE-----RMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLAL 118 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhh
Confidence 4579999999999999888764 588999875 5777777763 23445566778899999999999998654
Q ss_pred ccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 383 ITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 383 i~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++..++..+|.++.|+|||||+|+++.+
T Consensus 119 -~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 119 -HYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp -GGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -hhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 4567899999999999999999999854
No 18
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.49 E-value=9.9e-14 Score=135.67 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=96.1
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCC-
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRL- 366 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~L- 366 (689)
....+.+..+++.+. ...+|||||||+|.++..|+.. .|+++|+++ .+++.|.++ ..+...+...+
T Consensus 26 ~~~~~~~~~~l~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~---~~~~~~d~~~~~ 94 (240)
T 3dli_A 26 ELVKARLRRYIPYFK---GCRRVLDIGCGRGEFLELCKEEGIESIGVDINE-----DMIKFCEGK---FNVVKSDAIEYL 94 (240)
T ss_dssp HHHHHHHGGGGGGTT---TCSCEEEETCTTTHHHHHHHHHTCCEEEECSCH-----HHHHHHHTT---SEEECSCHHHHH
T ss_pred HHHHHHHHHHHhhhc---CCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCH-----HHHHHHHhh---cceeeccHHHHh
Confidence 344455555555443 3578999999999999888754 588998875 578888776 33444454443
Q ss_pred -CCCCCCcceEEeccccccccc--cHHHHHHHHHhccCCCcEEEEEcCCCch----------------hHHHHHHHHHHh
Q 044932 367 -PFPSGVFDAIHCDGCSITWHA--HGGKLLLEMNRILRPSGYFILSTKHDSI----------------EEEEALTTLTAS 427 (689)
Q Consensus 367 -PFpD~SFDlVhcs~cli~W~~--d~~~aL~EI~RVLRPGG~fVIsdp~~~l----------------e~~~~ie~La~~ 427 (689)
||++++||+|+|..++.+ .. +...+|.++.|+|||||+|++..+.... .....+..+++.
T Consensus 95 ~~~~~~~fD~i~~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 173 (240)
T 3dli_A 95 KSLPDKYLDGVMISHFVEH-LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEY 173 (240)
T ss_dssp HTSCTTCBSEEEEESCGGG-SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHH
T ss_pred hhcCCCCeeEEEECCchhh-CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHH
Confidence 899999999999765544 55 4489999999999999999998754211 122568888888
Q ss_pred cceeEEE
Q 044932 428 ICWNILA 434 (689)
Q Consensus 428 l~W~~v~ 434 (689)
.+|+.+.
T Consensus 174 aGf~~~~ 180 (240)
T 3dli_A 174 LGFRDVK 180 (240)
T ss_dssp HTCEEEE
T ss_pred CCCeEEE
Confidence 8888654
No 19
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=132.44 Aligned_cols=127 Identities=17% Similarity=0.190 Sum_probs=97.9
Q ss_pred CCCeEEEECCccchhHHHhhcCCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAKEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWHA 387 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~ 387 (689)
...+|||+|||+|.++..|. ..|+++|+++. .+. +...+...+|+++++||+|+|..++ |+ .
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~-------------~~~--~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~ 128 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-NPVHCFDLASL-------------DPR--VTVCDMAQVPLEDESVDVAVFCLSL-MG-T 128 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-SCEEEEESSCS-------------STT--EEESCTTSCSCCTTCEEEEEEESCC-CS-S
T ss_pred CCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC-------------Cce--EEEeccccCCCCCCCEeEEEEehhc-cc-c
Confidence 34689999999999988774 67999999884 233 3344667789999999999997665 53 7
Q ss_pred cHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCCC
Q 044932 388 HGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPES 453 (689)
Q Consensus 388 d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~ 453 (689)
++..+|.++.|+|+|||++++.+..........+..+++..+|+.+.... ..+...+.+++|...
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-~~~~~~~~~~~k~~~ 193 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDL-TNSHFFLFDFQKTGP 193 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEEC-CSTTCEEEEEEECSS
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEec-CCCeEEEEEEEecCc
Confidence 88999999999999999999987654332345688899999999876432 234456888888754
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.49 E-value=1.6e-13 Score=131.21 Aligned_cols=139 Identities=15% Similarity=0.102 Sum_probs=101.8
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.|.+ .++. ..+...+...+|+++++||+|+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEE-----MVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIF 111 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHH-----HHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHH-----HHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEE
Confidence 356899999999998877764 35899998864 4444443 3554 4455667788899999999999
Q ss_pred eccccccccccHHHHHHHHHhccCCCcEEEEEcCCC----------chhHHHHHHHHHHhcceeEEEeeccccCceeEEE
Q 044932 378 CDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD----------SIEEEEALTTLTASICWNILAHKTDEISEMGVKI 447 (689)
Q Consensus 378 cs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~----------~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~I 447 (689)
|..++. +..++..+|.++.|+|||||++++.+... .....+.+..+++..+|+.+..... .+..+..+
T Consensus 112 ~~~~l~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~~~~~~ 189 (219)
T 3dh0_A 112 MAFTFH-ELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV-GKYCFGVY 189 (219)
T ss_dssp EESCGG-GCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE-TTTEEEEE
T ss_pred eehhhh-hcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee-CCceEEEE
Confidence 986654 45688999999999999999999986321 1112356889999999998765332 34556788
Q ss_pred EEeCCC
Q 044932 448 YQKPES 453 (689)
Q Consensus 448 wqKp~~ 453 (689)
++|+..
T Consensus 190 ~~k~~~ 195 (219)
T 3dh0_A 190 AMIVKQ 195 (219)
T ss_dssp EECC--
T ss_pred EEeccc
Confidence 888753
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.49 E-value=7.7e-14 Score=136.58 Aligned_cols=110 Identities=11% Similarity=0.111 Sum_probs=81.7
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHH----HcCCC--cEEecC
Q 044932 291 HYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVAL----ERGFP--AVVSPL 361 (689)
Q Consensus 291 ~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~----eRGL~--~i~~~~ 361 (689)
.++..+...++ +. ...+|||||||+|.++..|+. ..|+++|+++. |++.|. ..|+. ..+...
T Consensus 23 ~~~~~l~~~~~-~~---~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~-----~l~~a~~~~~~~~~~~~v~~~~~ 93 (256)
T 1nkv_A 23 EKYATLGRVLR-MK---PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSL-----FTAQAKRRAEELGVSERVHFIHN 93 (256)
T ss_dssp HHHHHHHHHTC-CC---TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEES
T ss_pred HHHHHHHHhcC-CC---CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHH-----HHHHHHHHHHhcCCCcceEEEEC
Confidence 34455555543 22 357899999999998887764 36899998874 444443 34654 445667
Q ss_pred CCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 362 GNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 362 dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+...+|+ +++||+|+|..++ ++..++..+|.++.|+|||||+|++.++
T Consensus 94 d~~~~~~-~~~fD~V~~~~~~-~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 94 DAAGYVA-NEKCDVAACVGAT-WIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CCTTCCC-SSCEEEEEEESCG-GGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred ChHhCCc-CCCCCEEEECCCh-HhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 7788888 7999999997655 4455788999999999999999999864
No 22
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.48 E-value=2.1e-13 Score=125.77 Aligned_cols=134 Identities=12% Similarity=0.079 Sum_probs=98.5
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++.-...+...+ +|+++++||+|+|..++. +
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~-~ 87 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINV-----IALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFH-D 87 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCH-----HHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCST-T
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCH-----HHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchh-c
Confidence 3568999999999999988876 588888765 5777777773333444444 889999999999986654 4
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEcCCCc----------hhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCCC
Q 044932 386 HAHGGKLLLEMNRILRPSGYFILSTKHDS----------IEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPES 453 (689)
Q Consensus 386 ~~d~~~aL~EI~RVLRPGG~fVIsdp~~~----------le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~ 453 (689)
..++..+|.++.|+|||||++++.+.... ....+.+..+++ +|+.+..... ....+.++++|+.+
T Consensus 88 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~-~~~~~~l~~~~~~~ 162 (170)
T 3i9f_A 88 MDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP-TPYHFGLVLKRKTS 162 (170)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS-STTEEEEEEEECCC
T ss_pred ccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC-CCceEEEEEecCCC
Confidence 56889999999999999999999864211 112356778887 9998765432 33556777777543
No 23
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.48 E-value=2.9e-13 Score=134.43 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=90.8
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||||||+|.++..|+.. .|+++|+++. +++.|.+ .|+. ..+...+...+|+++++||+|+|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSG-----FIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWS 120 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHH-----HHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEE
Confidence 4579999999999999888865 5899998864 4554444 4554 44556777889999999999999
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcCC-----Cc-------------hhHHHHHHHHHHhcceeEEE
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH-----DS-------------IEEEEALTTLTASICWNILA 434 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~-----~~-------------le~~~~ie~La~~l~W~~v~ 434 (689)
..++.+ . ++..+|.++.|+|||||++++.++. .. +.....+..+++..+|+.+.
T Consensus 121 ~~~~~~-~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 121 EGAIYN-I-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp SSCGGG-T-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred cCCcee-c-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 876644 3 7889999999999999999998642 00 00124577788888887764
No 24
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.48 E-value=1.6e-13 Score=134.26 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=92.8
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcC---CCcEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERG---FPAVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRG---L~~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++. ....+...+...+|+++++||+|+|..+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICS-----NIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDA 129 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCH-----HHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHH
Confidence 4579999999999998887753 589999875 6788888774 2344556677888999999999999765
Q ss_pred ccccc--ccHHHHHHHHHhccCCCcEEEEEcCCC-----c--------------hhHHHHHHHHHHhcceeEEEe
Q 044932 382 SITWH--AHGGKLLLEMNRILRPSGYFILSTKHD-----S--------------IEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 382 li~W~--~d~~~aL~EI~RVLRPGG~fVIsdp~~-----~--------------le~~~~ie~La~~l~W~~v~~ 435 (689)
+.+ . .++..+|.++.|+|||||++++.++.. . ......+..+++..+|+.+..
T Consensus 130 l~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 130 ILA-LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp GGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHh-cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 544 5 678899999999999999999987421 0 011245777888888877643
No 25
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.48 E-value=5.9e-14 Score=148.94 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=111.6
Q ss_pred eecCCCCcccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC
Q 044932 276 LTFPQNQSEFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG 353 (689)
Q Consensus 276 ~~Fpgggt~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG 353 (689)
..|.+....|...+..+.+.+.+.++ +. ...+|||||||+|.++..|+.. .|+++|+++ .|++.|.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~~---~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~-----~~~~~a~~~~ 149 (416)
T 4e2x_A 79 PYHSSGSSVMREHFAMLARDFLATEL-TG---PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSS-----GVAAKAREKG 149 (416)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHTTT-CS---SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCH-----HHHHHHHTTT
T ss_pred cCcCcCCHHHHHHHHHHHHHHHHHhC-CC---CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCH-----HHHHHHHHcC
Confidence 33444445566667777777766554 22 3579999999999999988876 478888764 6888998887
Q ss_pred CCcEEec---CCCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCC-----------------
Q 044932 354 FPAVVSP---LGNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD----------------- 413 (689)
Q Consensus 354 L~~i~~~---~dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~----------------- 413 (689)
+...... .+...+||++++||+|+|..++ ++..++..+|.++.|+|||||+|++..+..
T Consensus 150 ~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl-~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 228 (416)
T 4e2x_A 150 IRVRTDFFEKATADDVRRTEGPANVIYAANTL-CHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHF 228 (416)
T ss_dssp CCEECSCCSHHHHHHHHHHHCCEEEEEEESCG-GGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCC
T ss_pred CCcceeeechhhHhhcccCCCCEEEEEECChH-HhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhh
Confidence 7654322 2235677888999999998655 446789999999999999999999987530
Q ss_pred chhHHHHHHHHHHhcceeEEEeec
Q 044932 414 SIEEEEALTTLTASICWNILAHKT 437 (689)
Q Consensus 414 ~le~~~~ie~La~~l~W~~v~~~~ 437 (689)
.......+..+++..+|+.+....
T Consensus 229 ~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 229 FLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCCHHHHHHHHHHcCCEEEEEEE
Confidence 011235689999999999876544
No 26
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.47 E-value=2.7e-13 Score=128.95 Aligned_cols=135 Identities=17% Similarity=0.210 Sum_probs=95.8
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCC---CCCCC-CcceEEecccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRL---PFPSG-VFDAIHCDGCS 382 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~L---PFpD~-SFDlVhcs~cl 382 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .+++.|.+++. ..+...+...+ |++.+ +||+|+|..++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l 126 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGIEAVGVDGDR-----TLVDAARAAGA-GEVHLASYAQLAEAKVPVGKDYDLICANFAL 126 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTCEEEEEESCH-----HHHHHHHHTCS-SCEEECCHHHHHTTCSCCCCCEEEEEEESCC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHhcc-cccchhhHHhhcccccccCCCccEEEECchh
Confidence 478999999999999888865 488888875 68888888732 22333333333 55444 59999998665
Q ss_pred ccccccHHHHHHHHHhccCCCcEEEEEcCCCc-----------------------------hhHHHHHHHHHHhcceeEE
Q 044932 383 ITWHAHGGKLLLEMNRILRPSGYFILSTKHDS-----------------------------IEEEEALTTLTASICWNIL 433 (689)
Q Consensus 383 i~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~-----------------------------le~~~~ie~La~~l~W~~v 433 (689)
. +.++..+|.++.|+|||||+|++.++... ....+.+..+++..+|+.+
T Consensus 127 ~--~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 127 L--HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp C--SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred h--hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 4 67888999999999999999999875310 0134668899999999987
Q ss_pred Eeecccc-----CceeEEEEEeC
Q 044932 434 AHKTDEI-----SEMGVKIYQKP 451 (689)
Q Consensus 434 ~~~~~~~-----g~~~i~IwqKp 451 (689)
....... ....+++.+||
T Consensus 205 ~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 205 SLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEECCCCTTCSSCSCEEEEEEEC
T ss_pred EEecCCCCCCCCceeEEEEeecC
Confidence 6543211 12346666664
No 27
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.47 E-value=5.3e-13 Score=129.22 Aligned_cols=142 Identities=14% Similarity=0.095 Sum_probs=96.2
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCC---CcEEecCCCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGF---PAVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL---~~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++-. ...+...+...+|++ ++||+|+|..
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~ 117 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSE-----KMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSAL 117 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCH-----HHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCH-----HHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeC
Confidence 4579999999999998887753 589999875 57777776521 344556677888888 9999999986
Q ss_pred ccccccccHH--HHHHHHHhccCCCcEEEEEcCCC--ch------------------------------------hHHHH
Q 044932 381 CSITWHAHGG--KLLLEMNRILRPSGYFILSTKHD--SI------------------------------------EEEEA 420 (689)
Q Consensus 381 cli~W~~d~~--~aL~EI~RVLRPGG~fVIsdp~~--~l------------------------------------e~~~~ 420 (689)
++.+ ..++. .+|.++.|+|||||+|++.+... .. .....
T Consensus 118 ~l~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (234)
T 3dtn_A 118 SIHH-LEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQ 196 (234)
T ss_dssp CGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHH
T ss_pred cccc-CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHH
Confidence 5544 44444 59999999999999999987321 00 01135
Q ss_pred HHHHHHhcceeEEEeeccccCceeEEEEEeCCCchhH
Q 044932 421 LTTLTASICWNILAHKTDEISEMGVKIYQKPESNDIY 457 (689)
Q Consensus 421 ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~~~cy 457 (689)
+..+++..||+.+....... ..++..-.|+..+..|
T Consensus 197 ~~~ll~~aGF~~v~~~~~~~-~~~~~~~~~~~~~~~~ 232 (234)
T 3dtn_A 197 QLNWLKEAGFRDVSCIYKYY-QFAVMFGRKTEGHHHH 232 (234)
T ss_dssp HHHHHHHTTCEEEEEEEEET-TEEEEEEECC------
T ss_pred HHHHHHHcCCCceeeeeeec-ceeEEEEEeccccccc
Confidence 66789999999875543322 2335555555544433
No 28
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.47 E-value=1.7e-13 Score=136.09 Aligned_cols=99 Identities=27% Similarity=0.439 Sum_probs=82.5
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWH 386 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~ 386 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++.... +...+...+|+++++||+|+|...+.++.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK-----EMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTCEEEEEESCH-----HHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCH-----HHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 468999999999999988865 488898875 5788888775432 55567788999999999999987777776
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 387 AHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 387 ~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
.++..+|.++.|+|||||+|++..+..
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 789999999999999999999988753
No 29
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.45 E-value=2.6e-13 Score=129.43 Aligned_cols=99 Identities=21% Similarity=0.292 Sum_probs=80.8
Q ss_pred CCCeEEEECCccchhHHHhhcC-CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWH 386 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~ 386 (689)
...+|||+|||+|.++..| .. .|+++|+++ .+++.|.++.....+...+...+|+++++||+|+|..++ ++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSE-----AMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTL-EFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCH-----HHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCT-TTC
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCH-----HHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChh-hhc
Confidence 3568999999999999888 66 789999875 577788776433445566777899999999999988654 446
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 387 AHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 387 ~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
.++..+|.++.|+|||||++++.++..
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 788999999999999999999998764
No 30
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.45 E-value=6.6e-13 Score=135.25 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=100.3
Q ss_pred CCCeEEEECCccchhHHHhh--c---CCeEEEEcCCcccHHHHHHHHHHc----CCC--cEEecCCCCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLL--A---KEVLTLTVGLKDDLVDLAQVALER----GFP--AVVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La--~---~~V~gmDIsp~D~seamlq~A~eR----GL~--~i~~~~dt~~LPFpD~SFDlV 376 (689)
...+|||||||+|.++..|+ . ..|+++|+++ .+++.|.++ |+. ..+...+...+|++ ++||+|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v 191 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDP-----EALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLL 191 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCH-----HHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCH-----HHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEE
Confidence 35789999999999998884 2 2589999876 466666654 443 34556777888998 999999
Q ss_pred EeccccccccccHHH---HHHHHHhccCCCcEEEEEcCCC-------c-----------------------------hhH
Q 044932 377 HCDGCSITWHAHGGK---LLLEMNRILRPSGYFILSTKHD-------S-----------------------------IEE 417 (689)
Q Consensus 377 hcs~cli~W~~d~~~---aL~EI~RVLRPGG~fVIsdp~~-------~-----------------------------le~ 417 (689)
+|..++.+ ..++.. +|.++.|+|||||+|++.+... . +..
T Consensus 192 ~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (305)
T 3ocj_A 192 TSNGLNIY-EPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRT 270 (305)
T ss_dssp ECCSSGGG-CCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EECChhhh-cCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCC
Confidence 98765544 445544 7999999999999999987220 0 012
Q ss_pred HHHHHHHHHhcceeEEEeeccccCceeEEEEEeC
Q 044932 418 EEALTTLTASICWNILAHKTDEISEMGVKIYQKP 451 (689)
Q Consensus 418 ~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp 451 (689)
.+.+..+++..+|+.+.......+....++.+||
T Consensus 271 ~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 271 HAQTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 4568899999999998766543344457788887
No 31
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=3.7e-13 Score=133.99 Aligned_cols=109 Identities=19% Similarity=0.189 Sum_probs=83.9
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCC
Q 044932 292 YLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFP 369 (689)
Q Consensus 292 Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFp 369 (689)
+.+.+.+.++. . ...+|||||||+|.++..|+.. .|+++|+++ .|++.|.++. ...+...+...+||+
T Consensus 22 ~~~~l~~~~~~-~---~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~-~~~~~~~d~~~~~~~ 91 (261)
T 3ege_A 22 IVNAIINLLNL-P---KGSVIADIGAGTGGYSVALANQGLFVYAVEPSI-----VMRQQAVVHP-QVEWFTGYAENLALP 91 (261)
T ss_dssp HHHHHHHHHCC-C---TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCH-----HHHHSSCCCT-TEEEECCCTTSCCSC
T ss_pred HHHHHHHHhCC-C---CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCH-----HHHHHHHhcc-CCEEEECchhhCCCC
Confidence 44555555541 1 4579999999999999998865 488998875 5676665554 455666777889999
Q ss_pred CCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 370 SGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 370 D~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+++||+|+|..++.+ ..++..+|.++.|+|| ||++++.+..
T Consensus 92 ~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 92 DKSVDGVISILAIHH-FSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TTCBSEEEEESCGGG-CSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCEeEEEEcchHhh-ccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 999999999866544 5789999999999999 9988887643
No 32
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.44 E-value=5.1e-13 Score=126.82 Aligned_cols=121 Identities=15% Similarity=0.147 Sum_probs=90.9
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCC-cEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFP-AVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~-~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .+++.|.+.++. ..+...+...+ +++++||+|+|..++.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~- 119 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLADRVTALDGSA-----EMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAH- 119 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSSEEEEEESCH-----HHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGG-
T ss_pred CCeEEEECCCCCHHHHHHHhcCCeEEEEeCCH-----HHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhc-
Confidence 468999999999998888754 588999875 577888777744 34555666666 88899999999865543
Q ss_pred cccH--HHHHHHHHhccCCCcEEEEEcCCCc-------------------------------hhHHHHHHHHHHhcceeE
Q 044932 386 HAHG--GKLLLEMNRILRPSGYFILSTKHDS-------------------------------IEEEEALTTLTASICWNI 432 (689)
Q Consensus 386 ~~d~--~~aL~EI~RVLRPGG~fVIsdp~~~-------------------------------le~~~~ie~La~~l~W~~ 432 (689)
..++ ..+|.++.|+|||||+|++.+.... ......+..+++..+|++
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 199 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSC 199 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEE
Confidence 4454 7899999999999999999864210 012356888999999986
Q ss_pred EEee
Q 044932 433 LAHK 436 (689)
Q Consensus 433 v~~~ 436 (689)
....
T Consensus 200 ~~~~ 203 (218)
T 3ou2_A 200 SVDE 203 (218)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 5443
No 33
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.44 E-value=4.9e-13 Score=130.83 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=92.4
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCC-----CcEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGF-----PAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL-----~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||||||+|.++..|+.. .|+++|+++ .+++.|.++.. ...+...+...+++++++||+|+|.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITE-----DFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCH-----HHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCH-----HHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEc
Confidence 3579999999999999888764 588999876 56777766532 1234556677888988899999998
Q ss_pred cccccccccH--HHHHHHHHhccCCCcEEEEEcCCC------------chhHHHHHHHHHHhcceeEEEeec
Q 044932 380 GCSITWHAHG--GKLLLEMNRILRPSGYFILSTKHD------------SIEEEEALTTLTASICWNILAHKT 437 (689)
Q Consensus 380 ~cli~W~~d~--~~aL~EI~RVLRPGG~fVIsdp~~------------~le~~~~ie~La~~l~W~~v~~~~ 437 (689)
.++.+ ..++ ..+|.++.|+|||||+|++.++.. .......+..+++..+|+.+....
T Consensus 154 ~~l~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 154 WVIGH-LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp SCGGG-SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred chhhh-CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 66544 4443 489999999999999999976421 111345688899999998876543
No 34
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.44 E-value=3.3e-13 Score=129.00 Aligned_cols=120 Identities=25% Similarity=0.292 Sum_probs=91.4
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc-CCCcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER-GFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR-GL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ ++.... .+...+| ++++||+|+|..++.++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~--~d~~~~~-~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDATDGSP-----ELAAEASRRLGRPVRT--MLFHQLD-AIDAYDAVWAHACLLHV 115 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHTSCCEE--CCGGGCC-CCSCEEEEEECSCGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEECCCH-----HHHHHHHHhcCCceEE--eeeccCC-CCCcEEEEEecCchhhc
Confidence 468999999999999888865 588999875 577777766 554443 3556777 78999999998766543
Q ss_pred c-ccHHHHHHHHHhccCCCcEEEEEcCCCc------------hhHHHHHHHHHHhcc-eeEEEee
Q 044932 386 H-AHGGKLLLEMNRILRPSGYFILSTKHDS------------IEEEEALTTLTASIC-WNILAHK 436 (689)
Q Consensus 386 ~-~d~~~aL~EI~RVLRPGG~fVIsdp~~~------------le~~~~ie~La~~l~-W~~v~~~ 436 (689)
. .+...+|.++.|+|||||+|++..+... ....+.+..+++..+ |+.+...
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 2 2667899999999999999999865421 113456889999999 9887554
No 35
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.43 E-value=8.1e-13 Score=126.56 Aligned_cols=123 Identities=19% Similarity=0.224 Sum_probs=92.6
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CC------CcEEecCCCCCCCCCCCCcceE
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GF------PAVVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL------~~i~~~~dt~~LPFpD~SFDlV 376 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ ++ ...+...+...+|+++++||+|
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGIDINS-----EAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEEECCH-----HHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 568999999999999888765 588999875 567777664 33 1244566778889999999999
Q ss_pred EeccccccccccHH---HHHHHHHhccCCCcEEEEEcCCCc--------------------------------------h
Q 044932 377 HCDGCSITWHAHGG---KLLLEMNRILRPSGYFILSTKHDS--------------------------------------I 415 (689)
Q Consensus 377 hcs~cli~W~~d~~---~aL~EI~RVLRPGG~fVIsdp~~~--------------------------------------l 415 (689)
+|..++. +..++. .+|.++.|+|||||++++.+.... .
T Consensus 106 ~~~~~l~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (235)
T 3sm3_A 106 VMQAFLT-SVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHH 184 (235)
T ss_dssp EEESCGG-GCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEEC
T ss_pred EEcchhh-cCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEe
Confidence 9986554 355666 899999999999999999864210 1
Q ss_pred hHHHHHHHHHHhcceeEEEeec
Q 044932 416 EEEEALTTLTASICWNILAHKT 437 (689)
Q Consensus 416 e~~~~ie~La~~l~W~~v~~~~ 437 (689)
...+.+.++++..+|+.+....
T Consensus 185 ~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 185 FTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp BCHHHHHHHHHTTTEEEEEEEE
T ss_pred CCHHHHHHHHHHcCCEEEEEEe
Confidence 1235688899999998876543
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.43 E-value=7.5e-13 Score=129.86 Aligned_cols=98 Identities=23% Similarity=0.367 Sum_probs=77.6
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
...+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .+++ ..+...+...+||++++||+|+|..
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKE-----MVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRY 95 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHH-----HHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEES
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHH-----HHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECC
Confidence 4578999999999999888764 5899998864 4444443 3554 3455667788999999999999986
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++.+ ..++..+|.++.|+|||||+|++.+.
T Consensus 96 ~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 96 AAHH-FSDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp CGGG-CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhh-ccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6544 56889999999999999999999754
No 37
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.43 E-value=7e-13 Score=129.69 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=78.1
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC----CCcEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG----FPAVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG----L~~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++- ....+...+...+||++++||+|+|..+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGYRYIALDADA-----AMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTCEEEEEESCH-----HHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 3578999999999999888865 588898875 5777777652 2344556677889999999999998754
Q ss_pred cccccccHHHHHHHHHhccCCCcEEEEE
Q 044932 382 SITWHAHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 382 li~W~~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
++|..++..+|.++.|+|||||++++.
T Consensus 114 -l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 -WHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -GGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 466778899999999999999999987
No 38
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.43 E-value=5.3e-13 Score=133.71 Aligned_cols=121 Identities=15% Similarity=0.215 Sum_probs=91.5
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CCC--cEEecCCCCCCC-CCCCCcceEEec
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GFP--AVVSPLGNRRLP-FPSGVFDAIHCD 379 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL~--~i~~~~dt~~LP-FpD~SFDlVhcs 379 (689)
..+|||||||+|.++..|+.. .|+++|+++ .+++.|.++ |+. ..+...+...+| +++++||+|+|.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSA-----QMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFH 143 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEEC
Confidence 468999999999999888765 588999876 456665553 442 334556667777 888999999997
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcCCC-------------------------------chhHHHHHHHHHHhc
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD-------------------------------SIEEEEALTTLTASI 428 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~-------------------------------~le~~~~ie~La~~l 428 (689)
.++ ++..++..+|.++.|+|||||+|++..+.. .......+..+++..
T Consensus 144 ~~l-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 144 AVL-EWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp SCG-GGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred chh-hcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 655 456788999999999999999999986421 011225688888888
Q ss_pred ceeEEEe
Q 044932 429 CWNILAH 435 (689)
Q Consensus 429 ~W~~v~~ 435 (689)
+|+++..
T Consensus 223 Gf~v~~~ 229 (285)
T 4htf_A 223 GWQIMGK 229 (285)
T ss_dssp TCEEEEE
T ss_pred CCceeee
Confidence 9987754
No 39
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.43 E-value=2e-12 Score=124.99 Aligned_cols=109 Identities=18% Similarity=0.198 Sum_probs=79.1
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC-CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCCCCC
Q 044932 291 HYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK-EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLGNRR 365 (689)
Q Consensus 291 ~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~-~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~dt~~ 365 (689)
.+.+.+...++ ...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ +....+...+...
T Consensus 22 ~~~~~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~d~~~ 90 (243)
T 3d2l_A 22 EWVAWVLEQVE------PGKRIADIGCGTGTATLLLADHYEVTGVDLSE-----EMLEIAQEKAMETNRHVDFWVQDMRE 90 (243)
T ss_dssp HHHHHHHHHSC------TTCEEEEESCTTCHHHHHHTTTSEEEEEESCH-----HHHHHHHHHHHHTTCCCEEEECCGGG
T ss_pred HHHHHHHHHcC------CCCeEEEecCCCCHHHHHHhhCCeEEEEECCH-----HHHHHHHHhhhhcCCceEEEEcChhh
Confidence 44555555543 2368999999999999888764 688999876 455555443 4444555667777
Q ss_pred CCCCCCCcceEEecccccccc---ccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 366 LPFPSGVFDAIHCDGCSITWH---AHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 366 LPFpD~SFDlVhcs~cli~W~---~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+|++ ++||+|+|....+++. .+...+|.++.|+|||||+|++..+
T Consensus 91 ~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 91 LELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 8887 8999999875234444 4567899999999999999998643
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.43 E-value=9.8e-13 Score=127.22 Aligned_cols=98 Identities=18% Similarity=0.201 Sum_probs=78.7
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCC--CcEEecCCCCCCCCCCCCcceEEecccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGF--PAVVSPLGNRRLPFPSGVFDAIHCDGCS 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL--~~i~~~~dt~~LPFpD~SFDlVhcs~cl 382 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++.. ...+...+...+|+++++||+|+|..++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSE-----KMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH-----HHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccc
Confidence 3578999999999998888754 588898875 57888887643 2344556677788989999999998654
Q ss_pred ccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 383 ITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 383 i~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++..++..+|.++.|+|||||+|++..+
T Consensus 118 -~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 118 -HYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp -GGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 4456889999999999999999999864
No 41
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=6.4e-13 Score=133.00 Aligned_cols=98 Identities=13% Similarity=0.209 Sum_probs=78.5
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
...+|||||||+|.++..|+.. .|+++|+++ .|++.|.++.....+...+...+|+ +++||+|+|..+ ++|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~-l~~ 129 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAA-----TMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAM-LHW 129 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESC-GGG
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCH-----HHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcch-hhh
Confidence 3578999999999999888754 588999875 5778887764333445567778888 489999998754 466
Q ss_pred cccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 386 HAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 386 ~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
..++..+|.++.|+|||||+|++..+.
T Consensus 130 ~~d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 130 VKEPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcCHHHHHHHHHHhcCCCcEEEEEecC
Confidence 788999999999999999999998754
No 42
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.42 E-value=1.3e-12 Score=127.73 Aligned_cols=98 Identities=11% Similarity=0.113 Sum_probs=79.6
Q ss_pred CCCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
...+|||+|||+|.++..|+. ..|+++|+++ .|++.|.++.....+...+...+| ++++||+|+|..+ +
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~-l 105 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD-----DMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAV-F 105 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH-----HHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESC-G
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH-----HHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCc-h
Confidence 356899999999998887764 3699999875 578888777434455566777888 7899999998754 4
Q ss_pred cccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 384 TWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 384 ~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+|..++..+|.++.|+|||||+|++..+.
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 106 QWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 66788999999999999999999998754
No 43
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.42 E-value=1.6e-13 Score=137.43 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=83.0
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CC-----CcEE
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GF-----PAVV 358 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL-----~~i~ 358 (689)
..|.+.|...++. . ...+|||||||+|.++..|+.. .|+++|+++ .|++.|.++ +. ...+
T Consensus 43 ~~~~~~l~~~l~~-~---~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~~~~~~~~ 113 (293)
T 3thr_A 43 AEYKAWLLGLLRQ-H---GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASD-----KMLKYALKERWNRRKEPAFDKWVI 113 (293)
T ss_dssp HHHHHHHHHHHHH-T---TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHHTTTSHHHHTCEE
T ss_pred HHHHHHHHHHhcc-c---CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCH-----HHHHHHHHhhhhcccccccceeeE
Confidence 4445555555542 1 3578999999999999888865 589999886 456666543 11 1233
Q ss_pred ecCCCCCCC---CCCCCcceEEecccccccccc-------HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 359 SPLGNRRLP---FPSGVFDAIHCDGCSITWHAH-------GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 359 ~~~dt~~LP---FpD~SFDlVhcs~cli~W~~d-------~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
...+...+| |++++||+|+|....+++..+ ...+|.++.|+|||||+|++..+.
T Consensus 114 ~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 114 EEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 445666777 889999999997334444556 789999999999999999999876
No 44
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=1.9e-12 Score=125.12 Aligned_cols=117 Identities=22% Similarity=0.232 Sum_probs=91.4
Q ss_pred CCeEEEECCccchhHHHhhcCCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAKEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWHAH 388 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~d 388 (689)
..+|||+|||+|.++..|+.. +++|+++ .+++.|.++++. +...+...+|+++++||+|+|..++ ++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~-----~~~~~a~~~~~~--~~~~d~~~~~~~~~~fD~v~~~~~l-~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSE-----RMAEIARKRGVF--VLKGTAENLPLKDESFDFALMVTTI-CFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCH-----HHHHHHHHTTCE--EEECBTTBCCSCTTCEEEEEEESCG-GGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCH-----HHHHHHHhcCCE--EEEcccccCCCCCCCeeEEEEcchH-hhccC
Confidence 468999999999999988877 8888875 578888887543 3445667789999999999998654 44678
Q ss_pred HHHHHHHHHhccCCCcEEEEEcCCCch---------------------hHHHHHHHHHHhcceeEEEe
Q 044932 389 GGKLLLEMNRILRPSGYFILSTKHDSI---------------------EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 389 ~~~aL~EI~RVLRPGG~fVIsdp~~~l---------------------e~~~~ie~La~~l~W~~v~~ 435 (689)
+..+|.++.|+|+|||++++.++.... .....+..+++..+|+.+..
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 899999999999999999998654210 12356888888888887654
No 45
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.41 E-value=1.2e-12 Score=133.73 Aligned_cols=122 Identities=12% Similarity=0.039 Sum_probs=92.0
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .|+. ..+...+...+||++++||+|+|
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAA-----QADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWN 191 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEE
Confidence 4579999999999998887753 6899998863 4555444 4654 45666777889999999999999
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcCC--C-c--h---------------hHHHHHHHHHHhcceeEEEee
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH--D-S--I---------------EEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~--~-~--l---------------e~~~~ie~La~~l~W~~v~~~ 436 (689)
..++.+ . +...+|.++.|+|||||+|++.++. . . . .....+..+++..+|+.+...
T Consensus 192 ~~~l~~-~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 192 NESTMY-V-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp ESCGGG-S-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred CCchhh-C-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 766544 4 5889999999999999999998632 1 0 0 012467888889999876543
No 46
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.41 E-value=4.7e-13 Score=126.80 Aligned_cols=117 Identities=16% Similarity=0.119 Sum_probs=86.6
Q ss_pred eEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCCCCCCCCCCCCcceEEecccccc
Q 044932 311 VVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLGNRRLPFPSGVFDAIHCDGCSIT 384 (689)
Q Consensus 311 ~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~ 384 (689)
+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ ++...+...+...+|+++++||+|+|..+++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~- 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSS-----VGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHL- 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSH-----HHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCC-
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCH-----HHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcC-
Confidence 8999999999999888865 588888876 455555443 5555566677778889999999999864332
Q ss_pred ccccHHHHHHHHHhccCCCcEEEEEcCCC--------------chhHHHHHHHHHHhcceeEEEe
Q 044932 385 WHAHGGKLLLEMNRILRPSGYFILSTKHD--------------SIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 385 W~~d~~~aL~EI~RVLRPGG~fVIsdp~~--------------~le~~~~ie~La~~l~W~~v~~ 435 (689)
...+...+|.++.|+|||||++++.+... .....+.+..+++ +|+++..
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 12467889999999999999999986421 1112356777777 8887654
No 47
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.41 E-value=5.7e-13 Score=135.21 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=73.3
Q ss_pred CCCeEEEECCccchhHHHhhcC------CeEEEEcCCcccHHHHHHHHHHc----CC--CcEEecCCCCCCCCCCCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLAK------EVLTLTVGLKDDLVDLAQVALER----GF--PAVVSPLGNRRLPFPSGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~------~V~gmDIsp~D~seamlq~A~eR----GL--~~i~~~~dt~~LPFpD~SFDl 375 (689)
+..+|||||||+|.++..|+.. .|+|+|+++ .|++.|+++ +. ...+...+...+|++ .||+
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~-----~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~ 142 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSP-----AMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASM 142 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCH-----HHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCH-----HHHHHHHHHHHhhccCceEEEeeccccccccc--cccc
Confidence 3568999999999998887643 489999876 577777664 33 234556677788876 5999
Q ss_pred EEeccccccccc--cHHHHHHHHHhccCCCcEEEEEcC
Q 044932 376 IHCDGCSITWHA--HGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 376 Vhcs~cli~W~~--d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
|+|..++ +|.. +...+|.+++|+|||||+|++++.
T Consensus 143 v~~~~~l-~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 143 VVLNFTL-QFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEEESCG-GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceeeeee-eecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 9987654 4443 335789999999999999999864
No 48
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.40 E-value=1.2e-12 Score=132.63 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=75.9
Q ss_pred CeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----C----CCcEEecCCCCCCCCCCCCcceEEec
Q 044932 310 RVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----G----FPAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----G----L~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
.+|||||||+|.++..|+.. .|+++|+++ .+++.|.++ + ....+...+...+|+ +++||+|+|+
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGWEVTALELST-----SVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVIS 157 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTCCEEEEESCH-----HHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEEC
T ss_pred CcEEEEeccCCHHHHHHHHcCCeEEEEECCH-----HHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEEC
Confidence 48999999999999988865 589999886 466666554 2 234456677778888 5899999987
Q ss_pred cccccccc--cHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 380 GCSITWHA--HGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 380 ~cli~W~~--d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
...+++.. +...+|.++.|+|||||+|++..+.
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 66666543 3578999999999999999998643
No 49
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.40 E-value=4.6e-12 Score=121.68 Aligned_cols=140 Identities=10% Similarity=0.121 Sum_probs=96.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----CC------CcEEecCCCCCCCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----GF------PAVVSPLGNRRLPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----GL------~~i~~~~dt~~LPFpD~SF 373 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ ++ ...+...+...+++++++|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 103 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSY-----SVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGY 103 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCH-----HHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTC
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCH-----HHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCC
Confidence 3579999999999999888753 589999876 466666654 22 2344455667778888999
Q ss_pred ceEEeccccccccccH--HHHHHHHHhccCCCcEEEEEcCCCc------h-------------hHHHHHH----HHHHhc
Q 044932 374 DAIHCDGCSITWHAHG--GKLLLEMNRILRPSGYFILSTKHDS------I-------------EEEEALT----TLTASI 428 (689)
Q Consensus 374 DlVhcs~cli~W~~d~--~~aL~EI~RVLRPGG~fVIsdp~~~------l-------------e~~~~ie----~La~~l 428 (689)
|+|+|..++.+ ..++ ..+|.++.|+|||||++++.....+ + .....+. .+++..
T Consensus 104 D~V~~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 182 (219)
T 3jwg_A 104 DAATVIEVIEH-LDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKY 182 (219)
T ss_dssp SEEEEESCGGG-CCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHH
T ss_pred CEEEEHHHHHh-CCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHC
Confidence 99999866544 4444 6899999999999997766542211 0 0123344 888899
Q ss_pred ceeEEEeecc----cc-CceeEEEEEeCCC
Q 044932 429 CWNILAHKTD----EI-SEMGVKIYQKPES 453 (689)
Q Consensus 429 ~W~~v~~~~~----~~-g~~~i~IwqKp~~ 453 (689)
+|++....-. .. ....++|++|...
T Consensus 183 Gf~v~~~~~g~~~~~~g~~~qi~~~~~~~~ 212 (219)
T 3jwg_A 183 GYSVRFLQIGEIDDEFGSPTQMGVFTLGAG 212 (219)
T ss_dssp TEEEEEEEESCCCTTSCCSEEEEEEEECC-
T ss_pred CcEEEEEecCCccccCCCCeEEEEEeccCC
Confidence 9987544211 12 2456999999754
No 50
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=1.9e-12 Score=122.40 Aligned_cols=118 Identities=20% Similarity=0.276 Sum_probs=84.9
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcC---CCcEE
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERG---FPAVV 358 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRG---L~~i~ 358 (689)
|......+.+.|..+++ ...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++. ....+
T Consensus 25 ~~~~~~~~~~~l~~~~~------~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~-----~~~~~a~~~~~~~~~i~~ 93 (215)
T 2pxx_A 25 WFGDFSSFRALLEPELR------PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSS-----VVVAAMQACYAHVPQLRW 93 (215)
T ss_dssp TTCCHHHHHHHHGGGCC------TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCH-----HHHHHHHHHTTTCTTCEE
T ss_pred cccCHHHHHHHHHHhcC------CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCH-----HHHHHHHHhcccCCCcEE
Confidence 33444455566665542 3468999999999998888754 589999876 4666766652 12344
Q ss_pred ecCCCCCCCCCCCCcceEEeccccc--------cc------cccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 359 SPLGNRRLPFPSGVFDAIHCDGCSI--------TW------HAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 359 ~~~dt~~LPFpD~SFDlVhcs~cli--------~W------~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
...+...+|+++++||+|+|..++. +| ..+...+|.++.|+|||||++++.++..
T Consensus 94 ~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 94 ETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp EECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 5567777899999999999864331 12 1245789999999999999999998764
No 51
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.39 E-value=2.4e-12 Score=120.56 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=85.4
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCC-CcEEecCCCCCCCCCCCCcceEEeccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGF-PAVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL-~~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
..+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .++ ...+...+...+|+ +++||+|+|..+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~ 106 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAM-----SIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVV 106 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESC
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHH-----HHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcch
Confidence 469999999999999888755 5899998864 4444433 455 34455667777888 799999999866
Q ss_pred ccccc-ccHHHHHHHHHhccCCCcEEEEEcCC-----------CchhHHHHHHHHHHhcceeEEEee
Q 044932 382 SITWH-AHGGKLLLEMNRILRPSGYFILSTKH-----------DSIEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 382 li~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~-----------~~le~~~~ie~La~~l~W~~v~~~ 436 (689)
+.++. .+...+|.++.|+|||||++++.+.. ......+.+.+++.. |+.+...
T Consensus 107 l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 107 LMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 54432 26789999999999999998876421 111123457778776 8776544
No 52
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.39 E-value=2.7e-13 Score=137.27 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=70.0
Q ss_pred CCCeEEEECCccchhHHH----hhc--CCe----EEEEcCCcccHHHHHHHHHHc-----CCCcE---EecCCCCCC---
Q 044932 308 NIRVVLEIGSADLSFVAS----LLA--KEV----LTLTVGLKDDLVDLAQVALER-----GFPAV---VSPLGNRRL--- 366 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~----La~--~~V----~gmDIsp~D~seamlq~A~eR-----GL~~i---~~~~dt~~L--- 366 (689)
...+|||||||+|.++.. ++. .++ +++|+++ .|++.|.++ ++..+ +...+...+
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~-----~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSA-----EQIAKYKELVAKTSNLENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCH-----HHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCH-----HHHHHHHHHHHhccCCCcceEEEEecchhhhhhh
Confidence 346899999999976543 322 223 7777664 577776654 33332 223333333
Q ss_pred ---CCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 367 ---PFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 367 ---PFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
||++++||+|+|..+ ++|..|+..+|.|++|+|||||+|++....
T Consensus 127 ~~~~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQM-LYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHTTTCCCCEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hccccCCCceeEEEEeee-eeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 377899999999765 466789999999999999999999998543
No 53
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.39 E-value=4.5e-12 Score=121.25 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=76.2
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCC---CcEEecCCCCCCCCCCCCcceEEecccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGF---PAVVSPLGNRRLPFPSGVFDAIHCDGCS 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL---~~i~~~~dt~~LPFpD~SFDlVhcs~cl 382 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++.. ...+...+...++ ++++||+|+|..++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l 124 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMP-----RAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVL 124 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCH-----HHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCH-----HHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHH
Confidence 3568999999999999988875 488898875 57777776532 2345566777777 67999999998655
Q ss_pred ccccccH---HHHHHHHHhccCCCcEEEEEcCC
Q 044932 383 ITWHAHG---GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 383 i~W~~d~---~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
++..++ ..+|.++.|+|||||+|+++++.
T Consensus 125 -~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 125 -YYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp -GGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -HhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 445555 57799999999999999998754
No 54
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.38 E-value=1.8e-12 Score=123.40 Aligned_cols=120 Identities=14% Similarity=0.109 Sum_probs=89.4
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCC--CCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNR--RLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~--~LPFpD~SFDlVhcs~cli 383 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++... +...+.. .+|+++++||+|+|..++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~-----~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFP-----EAAEQAKEKLDH--VVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSH-----HHHHHHHTTSSE--EEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCH-----HHHHHHHHhCCc--EEEcchhhcCCCCCCCccCEEEECChhh
Confidence 4579999999999999888765 588888775 577777766432 3333443 3788899999999976554
Q ss_pred cccccHHHHHHHHHhccCCCcEEEEEcCCCc---------------------------hhHHHHHHHHHHhcceeEEEe
Q 044932 384 TWHAHGGKLLLEMNRILRPSGYFILSTKHDS---------------------------IEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 384 ~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~---------------------------le~~~~ie~La~~l~W~~v~~ 435 (689)
+..++..+|.++.|+|+|||++++..+... ......+..+++..+|+.+..
T Consensus 105 -~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 182 (230)
T 3cc8_A 105 -HLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKV 182 (230)
T ss_dssp -GSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred -hcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEE
Confidence 456888999999999999999999875411 012356778888888877643
No 55
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.38 E-value=6.2e-12 Score=125.85 Aligned_cols=122 Identities=14% Similarity=0.127 Sum_probs=84.5
Q ss_pred cCCCCcccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHHc--
Q 044932 278 FPQNQSEFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALER-- 352 (689)
Q Consensus 278 Fpgggt~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~eR-- 352 (689)
|+.....+.......++.+.+.++ +. ...+|||||||+|.++..++. ..|+++|+++ .+++.|.++
T Consensus 38 ~~~~~~~l~~a~~~~~~~~~~~~~-~~---~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~-----~~~~~a~~~~~ 108 (287)
T 1kpg_A 38 FERDDMTLQEAQIAKIDLALGKLG-LQ---PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSK-----NQANHVQQLVA 108 (287)
T ss_dssp CSSTTCCHHHHHHHHHHHHHTTTT-CC---TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCH-----HHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcC-CC---CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCH-----HHHHHHHHHHH
Confidence 443333444444555566655543 22 357899999999999887773 4689999876 456666554
Q ss_pred --CCC--cEEecCCCCCCCCCCCCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 353 --GFP--AVVSPLGNRRLPFPSGVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 353 --GL~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++. ..+...+...+| ++||+|+|..++.|+. .+...+|.++.|+|||||++++.++
T Consensus 109 ~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 109 NSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp TCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 432 334445555554 8999999987665533 5778999999999999999999864
No 56
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.38 E-value=5.1e-13 Score=133.77 Aligned_cols=123 Identities=10% Similarity=0.050 Sum_probs=83.1
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc------CCC-----------------------
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER------GFP----------------------- 355 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR------GL~----------------------- 355 (689)
...+|||||||+|.++..++.. .|+++|+++. |++.|.++ ++.
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~-----~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDR-----NREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHH-----HHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHH-----HHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 3568999999999877655543 4899999874 55544432 000
Q ss_pred -----c-EEecCCCCC-CCCC---CCCcceEEecccccccc---ccHHHHHHHHHhccCCCcEEEEEcCCC---------
Q 044932 356 -----A-VVSPLGNRR-LPFP---SGVFDAIHCDGCSITWH---AHGGKLLLEMNRILRPSGYFILSTKHD--------- 413 (689)
Q Consensus 356 -----~-i~~~~dt~~-LPFp---D~SFDlVhcs~cli~W~---~d~~~aL~EI~RVLRPGG~fVIsdp~~--------- 413 (689)
. .+...|... .|++ +++||+|+|+.++.+-. ++...+|.++.|+|||||+|++++...
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~ 209 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKR 209 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCe
Confidence 0 133445444 4543 67999999987764321 355789999999999999999996321
Q ss_pred ----chhHHHHHHHHHHhcceeEEEe
Q 044932 414 ----SIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 414 ----~le~~~~ie~La~~l~W~~v~~ 435 (689)
.....+.+..++...+|+.+..
T Consensus 210 ~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 210 EFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred EeeccccCHHHHHHHHHHCCCEEEEE
Confidence 1113456888899999987654
No 57
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.4e-12 Score=131.94 Aligned_cols=95 Identities=12% Similarity=0.156 Sum_probs=75.8
Q ss_pred CCCeEEEECCccchhHHHhh---cC--CeEEEEcCCcccHHHHHHHHHHc-------CCCcEEecCCCCCCCCCC-----
Q 044932 308 NIRVVLEIGSADLSFVASLL---AK--EVLTLTVGLKDDLVDLAQVALER-------GFPAVVSPLGNRRLPFPS----- 370 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La---~~--~V~gmDIsp~D~seamlq~A~eR-------GL~~i~~~~dt~~LPFpD----- 370 (689)
...+|||||||+|.++..|+ .. .|+++|+++ .|++.|.++ .....+...+...+|+++
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 110 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSA-----TMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVD 110 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCH-----HHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCH-----HHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccccccc
Confidence 45799999999999998888 33 489999886 455655553 223455667778888887
Q ss_pred -CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEE
Q 044932 371 -GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 371 -~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
++||+|+|..++ +|. ++..+|.++.|+|||||+|++.
T Consensus 111 ~~~fD~V~~~~~l-~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 111 KQKIDMITAVECA-HWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp SSCEEEEEEESCG-GGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEeHhhHH-HHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 899999998654 556 8999999999999999999984
No 58
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.37 E-value=2.1e-12 Score=130.34 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=83.7
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecC
Q 044932 291 HYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPL 361 (689)
Q Consensus 291 ~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~ 361 (689)
.|+..+...+..+. ...+|||||||+|.++..|+.. .|+++|+++ .+++.|.++ +....+...
T Consensus 8 ~~~~~~~~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~v~~~~~ 79 (284)
T 3gu3_A 8 DYVSFLVNTVWKIT---KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGE-----TLLAEARELFRLLPYDSEFLEG 79 (284)
T ss_dssp HHHHHHHHTTSCCC---SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCH-----HHHHHHHHHHHSSSSEEEEEES
T ss_pred HHHHHHHHHHhccC---CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH-----HHHHHHHHHHHhcCCceEEEEc
Confidence 34444554443222 4579999999999999888753 589999886 455555543 333445567
Q ss_pred CCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 362 GNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 362 dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|...+|++ ++||+|+|..++ ++..++..+|.++.|+|||||+|++.++.
T Consensus 80 d~~~~~~~-~~fD~v~~~~~l-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 80 DATEIELN-DKYDIAICHAFL-LHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CTTTCCCS-SCEEEEEEESCG-GGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred chhhcCcC-CCeeEEEECChh-hcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 77788886 799999997654 45678899999999999999999999876
No 59
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.36 E-value=2.5e-12 Score=125.04 Aligned_cols=121 Identities=14% Similarity=0.035 Sum_probs=89.6
Q ss_pred CeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCC------cEEecCCCCCCCCCCCCcceEEeccc
Q 044932 310 RVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFP------AVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~------~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
.+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++.-. ..+...+...++ ++.+||+|+|..+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISE-----SALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVF 141 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCH-----HHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESS
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCH-----HHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChh
Confidence 48999999999999998875 488888875 566666665211 345566666766 4579999998765
Q ss_pred cccccc--cHHHHHHHHHhccCCCcEEEEEcCC--------CchhHHHHHHHHHHhcceeEEEeec
Q 044932 382 SITWHA--HGGKLLLEMNRILRPSGYFILSTKH--------DSIEEEEALTTLTASICWNILAHKT 437 (689)
Q Consensus 382 li~W~~--d~~~aL~EI~RVLRPGG~fVIsdp~--------~~le~~~~ie~La~~l~W~~v~~~~ 437 (689)
+.+ .. +...+|.++.|+|||||+|++.... .+....+.+..+++..+|+.+....
T Consensus 142 l~~-~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 142 FCA-IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp TTT-SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hhc-CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 544 33 6789999999999999999987542 1112345688999999999875543
No 60
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.36 E-value=1.3e-12 Score=138.46 Aligned_cols=121 Identities=17% Similarity=0.101 Sum_probs=90.7
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc---------C----CCcEEecCCCCCC---
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER---------G----FPAVVSPLGNRRL--- 366 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR---------G----L~~i~~~~dt~~L--- 366 (689)
...+|||||||+|.++..|+.. .|+++|+++ .|++.|.++ | ....+...+...+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLD-----NQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA 157 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCH-----HHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCH-----HHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc
Confidence 3578999999999988777542 599999876 466666664 4 2344555666666
Q ss_pred ---CCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCc------h--------------hHHHHHHH
Q 044932 367 ---PFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDS------I--------------EEEEALTT 423 (689)
Q Consensus 367 ---PFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~------l--------------e~~~~ie~ 423 (689)
||++++||+|+|..+ ++|..++..+|.++.|+|||||+|++.+.... . .....+..
T Consensus 158 ~~~~~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 158 EPEGVPDSSVDIVISNCV-CNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRR 236 (383)
T ss_dssp BSCCCCTTCEEEEEEESC-GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHH
T ss_pred ccCCCCCCCEEEEEEccc-hhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHH
Confidence 999999999998754 45677899999999999999999999863210 0 11256888
Q ss_pred HHHhcceeEEE
Q 044932 424 LTASICWNILA 434 (689)
Q Consensus 424 La~~l~W~~v~ 434 (689)
+++..+|..+.
T Consensus 237 ll~~aGF~~v~ 247 (383)
T 4fsd_A 237 LVAEAGFRDVR 247 (383)
T ss_dssp HHHHTTCCCEE
T ss_pred HHHHCCCceEE
Confidence 99999997653
No 61
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=2.3e-12 Score=123.34 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=82.9
Q ss_pred hHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecC
Q 044932 288 GVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPL 361 (689)
Q Consensus 288 ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~ 361 (689)
....+.+.+.+.++ ...+|||+|||+|.++..|+.. .|+++|+++. +++.|.++ +....+...
T Consensus 24 ~~~~~~~~l~~~~~------~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~ 92 (227)
T 1ve3_A 24 RIETLEPLLMKYMK------KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISED-----MIRKAREYAKSRESNVEFIVG 92 (227)
T ss_dssp HHHHHHHHHHHSCC------SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHHHHHhcC------CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHH-----HHHHHHHHHHhcCCCceEEEC
Confidence 33444555554433 2468999999999999888765 5899998863 45554443 334455566
Q ss_pred CCCCCCCCCCCcceEEecccccc-ccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 362 GNRRLPFPSGVFDAIHCDGCSIT-WHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 362 dt~~LPFpD~SFDlVhcs~cli~-W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+...+++++++||+|+|..++.. +..+...+|.++.|+|||||+|++.++.
T Consensus 93 d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 93 DARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 77788898899999998865222 2346788999999999999999999775
No 62
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.36 E-value=8.6e-13 Score=133.26 Aligned_cols=120 Identities=11% Similarity=0.005 Sum_probs=85.0
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC----------------------CCcEEecCCCC
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG----------------------FPAVVSPLGNR 364 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG----------------------L~~i~~~~dt~ 364 (689)
..+|||+|||+|.++.+|+.. .|+|+|+|+ .|++.|.++. ....+.+.|..
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~-----~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGVEISE-----IGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEECSCH-----HHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEEECCH-----HHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 468999999999999999865 489999876 5677775542 23345567778
Q ss_pred CCCCCC-CCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEEc-C--------CCchhHHHHHHHHHHhcceeEE
Q 044932 365 RLPFPS-GVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILST-K--------HDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 365 ~LPFpD-~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsd-p--------~~~le~~~~ie~La~~l~W~~v 433 (689)
.+|+++ ++||+|++..++.+.. .+...++.++.|+|||||+|++.+ . +.+....+++..++.. +|+++
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 888875 8999999865543322 345679999999999999997542 1 1111223557777776 48765
Q ss_pred E
Q 044932 434 A 434 (689)
Q Consensus 434 ~ 434 (689)
.
T Consensus 223 ~ 223 (252)
T 2gb4_A 223 C 223 (252)
T ss_dssp E
T ss_pred E
Confidence 4
No 63
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.35 E-value=4.1e-12 Score=122.11 Aligned_cols=96 Identities=14% Similarity=0.098 Sum_probs=72.9
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----CC------CcEEecCCCCCCCCCCCCcc
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----GF------PAVVSPLGNRRLPFPSGVFD 374 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----GL------~~i~~~~dt~~LPFpD~SFD 374 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ ++ ...+...+...+++++++||
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSY-----RSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYD 104 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCH-----HHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCS
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCH-----HHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcC
Confidence 569999999999999888753 589999876 466666654 33 23444556666777788999
Q ss_pred eEEeccccccccccH--HHHHHHHHhccCCCcEEEEEc
Q 044932 375 AIHCDGCSITWHAHG--GKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 375 lVhcs~cli~W~~d~--~~aL~EI~RVLRPGG~fVIsd 410 (689)
+|+|..++.+ ..++ ..+|.++.|+|||||++++..
T Consensus 105 ~v~~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 105 AATVIEVIEH-LDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEESCGGG-CCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEeeHHHHHc-CCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 9999866544 4544 789999999999999777764
No 64
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=6.7e-13 Score=129.95 Aligned_cols=112 Identities=16% Similarity=0.156 Sum_probs=78.6
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLG 362 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~d 362 (689)
..++..+...++ . ...+|||||||+|.++..|+.. .|+++|+++ .|++.|.++ +....+...+
T Consensus 47 ~~~~~~l~~~~~--~---~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~v~~~~~d 116 (236)
T 1zx0_A 47 TPYMHALAAAAS--S---KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND-----GVFQRLRDWAPRQTHKVIPLKGL 116 (236)
T ss_dssp HHHHHHHHHHHT--T---TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCH-----HHHHHHHHHGGGCSSEEEEEESC
T ss_pred HHHHHHHHhhcC--C---CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCH-----HHHHHHHHHHHhcCCCeEEEecC
Confidence 345555555443 1 3568999999999999988764 488898875 577777664 2333444556
Q ss_pred CCCC--CCCCCCcceEEe-cccc-cc-cc-ccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 363 NRRL--PFPSGVFDAIHC-DGCS-IT-WH-AHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 363 t~~L--PFpD~SFDlVhc-s~cl-i~-W~-~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
...+ ||++++||+|+| ...+ ++ ++ .+...+|.++.|+|||||+|++.+.
T Consensus 117 ~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 117 WEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred HHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 6666 899999999998 4332 11 11 2344779999999999999998753
No 65
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.35 E-value=2.6e-12 Score=121.75 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=73.4
Q ss_pred CCeEEEECCccchhHH-Hhhc--CCeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcceEEeccc
Q 044932 309 IRVVLEIGSADLSFVA-SLLA--KEVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa-~La~--~~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
..+|||+|||+|.++. .++. ..|+++|+++. |++.|.+ .+....+...+...+|+++++||+|+|..+
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDL-----QLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHH-----HHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHH-----HHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcCh
Confidence 5789999999998743 3433 35899998864 4444443 344444556677789999999999998765
Q ss_pred ccccc-ccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 382 SITWH-AHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 382 li~W~-~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+.++. .+...+|.++.|+|||||++++.+.
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 54432 5678999999999999999999864
No 66
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.33 E-value=1.1e-11 Score=125.51 Aligned_cols=121 Identities=17% Similarity=0.153 Sum_probs=82.9
Q ss_pred cCCCCcccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc--
Q 044932 278 FPQNQSEFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER-- 352 (689)
Q Consensus 278 Fpgggt~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR-- 352 (689)
|+.....+.......++.+...+. +. ...+|||||||+|.++..|+.. .|+++|+++ .+++.|.++
T Consensus 46 ~~~~~~~l~~a~~~~~~~~~~~~~-~~---~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~-----~~~~~a~~~~~ 116 (302)
T 3hem_A 46 FERPDMTLEEAQYAKRKLALDKLN-LE---PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSE-----NQYAHDKAMFD 116 (302)
T ss_dssp CSSTTCCHHHHHHHHHHHHHHTTC-CC---TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCH-----HHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHHHHHcC-CC---CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCH-----HHHHHHHHHHH
Confidence 444333444444555555655543 22 4579999999999998887754 589999886 455555543
Q ss_pred --CCC--cEEecCCCCCCCCCCCCcceEEeccccccccccH---------HHHHHHHHhccCCCcEEEEEcC
Q 044932 353 --GFP--AVVSPLGNRRLPFPSGVFDAIHCDGCSITWHAHG---------GKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 353 --GL~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~d~---------~~aL~EI~RVLRPGG~fVIsdp 411 (689)
|+. ..+...+...+ +++||+|+|..++.+ ..++ ..+|.++.|+|||||+|++.+.
T Consensus 117 ~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~-~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 117 EVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEH-FADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp HSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGG-TTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred hcCCCCceEEEECCHHHc---CCCccEEEEcchHHh-cCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 554 33445555544 699999999865544 4333 6899999999999999999864
No 67
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.33 E-value=3.2e-12 Score=125.16 Aligned_cols=124 Identities=12% Similarity=0.084 Sum_probs=87.3
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcC--CC---------------------------
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERG--FP--------------------------- 355 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRG--L~--------------------------- 355 (689)
...+|||+|||+|.++..++.. .|+++|+++ .|++.|.++. ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTD-----QNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCH-----HHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCH-----HHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 3568999999999988877754 588999876 4566655431 11
Q ss_pred -----c-EEecCCCCCC-CCCC---CCcceEEecccccc---ccccHHHHHHHHHhccCCCcEEEEEcCCC---------
Q 044932 356 -----A-VVSPLGNRRL-PFPS---GVFDAIHCDGCSIT---WHAHGGKLLLEMNRILRPSGYFILSTKHD--------- 413 (689)
Q Consensus 356 -----~-i~~~~dt~~L-PFpD---~SFDlVhcs~cli~---W~~d~~~aL~EI~RVLRPGG~fVIsdp~~--------- 413 (689)
. .+...+...+ |+++ ++||+|+|..++.+ +..+...+|.++.|+|||||+|++.+...
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 2 3445555544 4466 89999999876542 23467899999999999999999986321
Q ss_pred ----chhHHHHHHHHHHhcceeEEEee
Q 044932 414 ----SIEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 414 ----~le~~~~ie~La~~l~W~~v~~~ 436 (689)
.....+.+..++...+|+.+...
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEEEE
Confidence 11123468889999999886554
No 68
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.33 E-value=1.3e-12 Score=129.52 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=76.0
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCCC
Q 044932 291 HYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLGN 363 (689)
Q Consensus 291 ~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~dt 363 (689)
.|.+.+.+.++. .+.+|||||||+|.++.+++.. .|+++|++| .|++.|+++ +....+...+.
T Consensus 48 ~~m~~~a~~~~~-----~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~-----~~~~~a~~~~~~~~~~~~~~~~~a 117 (236)
T 3orh_A 48 PYMHALAAAASS-----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECND-----GVFQRLRDWAPRQTHKVIPLKGLW 117 (236)
T ss_dssp HHHHHHHHHHTT-----TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCH-----HHHHHHHHHGGGCSSEEEEEESCH
T ss_pred HHHHHHHHhhcc-----CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCH-----HHHHHHHHHHhhCCCceEEEeehH
Confidence 444555555431 3578999999999999888865 488999876 466666654 33333433333
Q ss_pred C--CCCCCCCCcceEEec----cccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 364 R--RLPFPSGVFDAIHCD----GCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 364 ~--~LPFpD~SFDlVhcs----~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
+ ..++++++||.|++- ........+...+|.|+.|||||||+|++..
T Consensus 118 ~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 118 EDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred HhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 2 336889999999742 1112223467899999999999999999864
No 69
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.32 E-value=6.2e-12 Score=126.02 Aligned_cols=123 Identities=12% Similarity=0.081 Sum_probs=84.5
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWH 386 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~ 386 (689)
..+|||+|||+|.++..|+.. .|+++|+++... ..+.+.+...++...+...+...+++ +++||+|+|..++.+..
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~-~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSI-AFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSC
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHH-HHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCC
Confidence 468999999999999888865 589999886422 11222233346655666677777777 79999999986554322
Q ss_pred -ccHHHHHHHHHhccCCCcEEEEEcCC-----------CchhHHHHHHHHHHhcceeEEEe
Q 044932 387 -AHGGKLLLEMNRILRPSGYFILSTKH-----------DSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 387 -~d~~~aL~EI~RVLRPGG~fVIsdp~-----------~~le~~~~ie~La~~l~W~~v~~ 435 (689)
++...+|.++.|+|||||++++.... ........+..+... |+.+..
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 33458999999999999998876421 111122346677665 777654
No 70
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.32 E-value=1.8e-12 Score=128.70 Aligned_cols=98 Identities=19% Similarity=0.197 Sum_probs=77.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||||||+|.++..|+.. .|+++|+++. +++.|.+ .+++ ..+...+...+|+++++||+|+|
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPE-----SLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHH-----HHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEE
Confidence 4579999999999998887743 5899998863 4555444 3554 34556677889999999999998
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
..++ ++..++..+|.++.|+|||||+|++.++
T Consensus 112 ~~~l-~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 112 CFVL-EHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp ESCG-GGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred echh-hhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 7654 4567888999999999999999999864
No 71
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.32 E-value=4.3e-12 Score=127.85 Aligned_cols=122 Identities=17% Similarity=0.114 Sum_probs=82.4
Q ss_pred CCCeEEEECCccchhHHHhh---cCCeEEEEcCCcccHHHHHHHHHHc---------------------CCC--------
Q 044932 308 NIRVVLEIGSADLSFVASLL---AKEVLTLTVGLKDDLVDLAQVALER---------------------GFP-------- 355 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La---~~~V~gmDIsp~D~seamlq~A~eR---------------------GL~-------- 355 (689)
...+|||||||+|.++..++ ...|+++|+++ .|++.|.++ |..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLE-----VNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKER 145 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCH-----HHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCH-----HHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHH
Confidence 35789999999998554333 23699999876 456555542 100
Q ss_pred ------cEEecCCCCC-CCC-----CCCCcceEEeccccccc----cccHHHHHHHHHhccCCCcEEEEEcCC-------
Q 044932 356 ------AVVSPLGNRR-LPF-----PSGVFDAIHCDGCSITW----HAHGGKLLLEMNRILRPSGYFILSTKH------- 412 (689)
Q Consensus 356 ------~i~~~~dt~~-LPF-----pD~SFDlVhcs~cli~W----~~d~~~aL~EI~RVLRPGG~fVIsdp~------- 412 (689)
..+...|... +|| ++++||+|+|..++ +| ..++..+|.++.|+|||||+|++....
T Consensus 146 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l-~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~ 224 (289)
T 2g72_A 146 QLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCL-EAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLA 224 (289)
T ss_dssp HHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCH-HHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEE
T ss_pred HHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhh-hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEc
Confidence 1122335555 664 45679999998654 55 446789999999999999999997421
Q ss_pred ------CchhHHHHHHHHHHhcceeEEEe
Q 044932 413 ------DSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 413 ------~~le~~~~ie~La~~l~W~~v~~ 435 (689)
......+.+..+++..+|+.+..
T Consensus 225 ~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 225 GEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp TTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 01113456888999999987654
No 72
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.32 E-value=2.8e-11 Score=113.32 Aligned_cols=122 Identities=11% Similarity=0.034 Sum_probs=77.7
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCCc-EEecCCCCCCC-CCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFPA-VVSPLGNRRLP-FPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~~-i~~~~dt~~LP-FpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..|+.. .|+++|+++. |++.|.+ .++.. .+...+...++ +++++||+|++.
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~-----~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQ-----ALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHH-----HHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHH-----HHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 3578999999999999988865 5999999864 5555544 35532 23333444443 567899999876
Q ss_pred cccccc--------cccHHHHHHHHHhccCCCcEEEEEcCCCc---hhHHHHHHHHHHhcc---eeEEE
Q 044932 380 GCSITW--------HAHGGKLLLEMNRILRPSGYFILSTKHDS---IEEEEALTTLTASIC---WNILA 434 (689)
Q Consensus 380 ~cli~W--------~~d~~~aL~EI~RVLRPGG~fVIsdp~~~---le~~~~ie~La~~l~---W~~v~ 434 (689)
...++. ..+...+|.++.|+|||||+|++...... ......+..++..+. |....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 165 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAML 165 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEE
Confidence 333332 12345789999999999999999865321 222334555555544 55543
No 73
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.31 E-value=6.4e-12 Score=122.48 Aligned_cols=112 Identities=18% Similarity=0.212 Sum_probs=85.2
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCC-CCCCCC-CCCcceEEecccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGN-RRLPFP-SGVFDAIHCDGCSIT 384 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt-~~LPFp-D~SFDlVhcs~cli~ 384 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++.....+...+. ..+||+ +++||+|+|..
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAARWAAYDFSP-----ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCH-----HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCEEEEEECCH-----HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 578999999999999888865 588999875 57888887744445555665 678998 99999999862
Q ss_pred ccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEe
Q 044932 385 WHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 385 W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~ 435 (689)
++..+|.++.|+|||||+|+........ ..+..++...+|..+..
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 ---GPTSVILRLPELAAPDAHFLYVGPRLNV---PEVPERLAAVGWDIVAE 164 (226)
T ss_dssp ---CCSGGGGGHHHHEEEEEEEEEEESSSCC---THHHHHHHHTTCEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCcEEEEeCCcCCH---HHHHHHHHHCCCeEEEE
Confidence 3457899999999999999943322222 23677888888887654
No 74
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.30 E-value=7.5e-12 Score=122.45 Aligned_cols=99 Identities=22% Similarity=0.271 Sum_probs=75.1
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||+|||+|.++..|+.. .|+++|+++. |++.|.+ .++...+...+...++++ ++||+|+|..+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~-----~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 114 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEE-----MLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFS 114 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSS
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHH-----HHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCC
Confidence 3579999999999999888765 5899998864 5555443 355555666677778876 78999998654
Q ss_pred ccccc--ccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 382 SITWH--AHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 382 li~W~--~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
.+++. .+...+|.++.|+|+|||+|++..+.
T Consensus 115 ~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 115 TIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 44432 35678999999999999999987664
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.30 E-value=5.9e-12 Score=125.32 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=75.2
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc----CCC--cEEecCCCCCCCC-CCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER----GFP--AVVSPLGNRRLPF-PSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR----GL~--~i~~~~dt~~LPF-pD~SFDlVh 377 (689)
...+|||+|||+|.++..++.. .|+++|+++ .+++.|.++ ++. ..+...+...+|+ ++++||+|+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAE-----VSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCH-----HHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCH-----HHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEE
Confidence 3578999999999988777643 589999886 455555554 331 3445667777888 689999999
Q ss_pred eccccccc----cccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 378 CDGCSITW----HAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 378 cs~cli~W----~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|..++ ++ ..+...+|.++.|+|||||+|++..+.
T Consensus 139 ~~~~l-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 139 SQFSF-HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EESCG-GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ECchh-hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 87654 33 346678999999999999999998754
No 76
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.30 E-value=3.1e-11 Score=111.73 Aligned_cols=99 Identities=10% Similarity=0.064 Sum_probs=72.5
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC---cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP---AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~---~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++. ..+...+... ++++++||+|++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~-----~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~ 125 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRR-----AIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIIT 125 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHH-----HHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHH-----HHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEE
Confidence 3578999999999998888754 5899998864 4444443 3555 3444455433 456789999998
Q ss_pred ccccccc-cccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 379 DGCSITW-HAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 379 s~cli~W-~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
...+ ++ ..+...+|.++.|+|+|||++++..+..
T Consensus 126 ~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 126 NPPI-RAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CCCS-TTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred CCCc-ccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 6533 33 2456789999999999999999998764
No 77
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.30 E-value=2.9e-11 Score=126.01 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCCcEE-ecCCCCCCC---CCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFPAVV-SPLGNRRLP---FPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~~i~-~~~dt~~LP---FpD~SFDlVhcs~ 380 (689)
...+|||+|||||.|+..|+.. .|+++|+++. |++.++++...... ...+...++ ++..+||+|+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~-----mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTN-----QLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSS-----CSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 3579999999999999888754 4999999985 44444443222211 111222222 3445799999865
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEcCCC------------c-------hhHHHHHHHHHHhcceeEEEeeccc--
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILSTKHD------------S-------IEEEEALTTLTASICWNILAHKTDE-- 439 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~------------~-------le~~~~ie~La~~l~W~~v~~~~~~-- 439 (689)
.++ +...+|.|+.|+|||||+|++...|. . ....+.+..++...+|.......-.
T Consensus 160 sf~----sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~ 235 (291)
T 3hp7_A 160 SFI----SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQ 235 (291)
T ss_dssp SSS----CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSC
T ss_pred eHh----hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 443 24689999999999999999984321 1 0123567788889999886543322
Q ss_pred ---cCceeEEEEEeC
Q 044932 440 ---ISEMGVKIYQKP 451 (689)
Q Consensus 440 ---~g~~~i~IwqKp 451 (689)
++.++++.++|.
T Consensus 236 g~~gn~e~l~~~~~~ 250 (291)
T 3hp7_A 236 GGHGNIEFLAHLEKT 250 (291)
T ss_dssp CGGGCCCEEEEEEEC
T ss_pred CCCcCHHHHHHhhhc
Confidence 244566666653
No 78
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.29 E-value=1.7e-11 Score=120.65 Aligned_cols=133 Identities=10% Similarity=0.017 Sum_probs=91.3
Q ss_pred CCeEEEECCccchhHHHhh--c--CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCC---CCCcceE
Q 044932 309 IRVVLEIGSADLSFVASLL--A--KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFP---SGVFDAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La--~--~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFp---D~SFDlV 376 (689)
..+|||||||+|.++..|+ . ..|+++|+++. |++.|.+ .++. ..+...+...++++ +++||+|
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNK-----RITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHH-----HHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHH-----HHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 4689999999999887776 2 35999998864 4444443 3664 34445565666664 6899999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccc----cCceeEEEEEeC
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDE----ISEMGVKIYQKP 451 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~----~g~~~i~IwqKp 451 (689)
+|.. ..+...++.++.|+|||||+|++............+...++..+|......... .+.-++.+++|.
T Consensus 146 ~~~~-----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 146 TARA-----VARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp EEEC-----CSCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEec-----cCCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEec
Confidence 9854 236779999999999999999998654444444556677888899875443211 123456666664
No 79
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.28 E-value=3.3e-12 Score=132.21 Aligned_cols=98 Identities=14% Similarity=0.101 Sum_probs=69.1
Q ss_pred CCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHHc----CCC-------cEEecCCC------CCC--
Q 044932 309 IRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALER----GFP-------AVVSPLGN------RRL-- 366 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~eR----GL~-------~i~~~~dt------~~L-- 366 (689)
..+|||||||+|..+..++. ..|+|+|+|+ .|++.|+++ ++. ..+.+.+. ..|
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~-----~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDA-----DAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCH-----HHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCH-----HHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc
Confidence 57899999999975544432 2599999986 466666554 322 12322222 222
Q ss_pred CCCCCCcceEEecccccccc---ccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 367 PFPSGVFDAIHCDGCSITWH---AHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 367 PFpD~SFDlVhcs~cli~W~---~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
++++++||+|+|..++ ||. .+...+|.++.|+|||||+|+++++.
T Consensus 124 ~~~~~~FD~V~~~~~l-hy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAI-HYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp TCCSSCEEEEEEESCG-GGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccCCCeeEEEECchH-HHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5788999999998654 432 35679999999999999999999876
No 80
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.28 E-value=2.1e-11 Score=116.18 Aligned_cols=130 Identities=15% Similarity=0.068 Sum_probs=89.3
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEecc
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
..+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .++. ..+...+. +++.+++||+|+|..
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~v~~~~~d~--~~~~~~~fD~i~~~~ 133 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDE-----SMTAAEENAALNGIYDIALQKTSL--LADVDGKFDLIVANI 133 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHHHHHTTCCCCEEEESST--TTTCCSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCceEEEeccc--cccCCCCceEEEECC
Confidence 568999999999998888764 5899998863 5555544 3554 34444444 335578999999864
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCCC
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPES 453 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~ 453 (689)
.. + ....+|.++.|+|||||++++.+.... ....+..++...+|+.+..... +.-..++.++|.+
T Consensus 134 ~~-~---~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~Gf~~~~~~~~--~~w~~~~~~~~~~ 198 (205)
T 3grz_A 134 LA-E---ILLDLIPQLDSHLNEDGQVIFSGIDYL--QLPKIEQALAENSFQIDLKMRA--GRWIGLAISRKHE 198 (205)
T ss_dssp CH-H---HHHHHGGGSGGGEEEEEEEEEEEEEGG--GHHHHHHHHHHTTEEEEEEEEE--TTEEEEEEEECC-
T ss_pred cH-H---HHHHHHHHHHHhcCCCCEEEEEecCcc--cHHHHHHHHHHcCCceEEeecc--CCEEEEEEecccc
Confidence 33 2 245889999999999999999864422 2345778888999988765432 3344455555443
No 81
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=7.4e-12 Score=124.17 Aligned_cols=93 Identities=23% Similarity=0.287 Sum_probs=75.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
...+|||+|||+|.++..++.. .|+++|+++ .+++.|.+++....+...+...+|+++++||+|+|...
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSK-----VAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCH-----HHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCH-----HHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC--
Confidence 3568999999999998887754 588998875 57888888765555666677889999999999998643
Q ss_pred cccccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 384 TWHAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 384 ~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
. .+|.++.|+|||||+|++.++..
T Consensus 158 ~------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 P------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp C------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred h------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 1 46899999999999999998753
No 82
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.27 E-value=3e-11 Score=123.02 Aligned_cols=116 Identities=10% Similarity=0.047 Sum_probs=81.6
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHHc----CCC--
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALER----GFP-- 355 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~eR----GL~-- 355 (689)
+.......++.+.+.++ +. ...+|||||||+|.++..|+. ..|+++|+++ .+++.|.++ |+.
T Consensus 71 l~~~~~~~~~~~~~~~~-~~---~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~ 141 (318)
T 2fk8_A 71 LEEAQYAKVDLNLDKLD-LK---PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSK-----NQHARCEQVLASIDTNRS 141 (318)
T ss_dssp HHHHHHHHHHHHHTTSC-CC---TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCH-----HHHHHHHHHHHTSCCSSC
T ss_pred HHHHHHHHHHHHHHhcC-CC---CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCCCc
Confidence 33334445555555543 22 356899999999999887774 3689999876 466666554 443
Q ss_pred cEEecCCCCCCCCCCCCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 356 AVVSPLGNRRLPFPSGVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 356 ~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
..+...+...+| ++||+|+|..++.+.. .+...+|.++.|+|||||+|++.++.
T Consensus 142 v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 142 RQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred eEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 334455555554 7999999986654432 57789999999999999999998764
No 83
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.26 E-value=1.1e-11 Score=123.86 Aligned_cols=130 Identities=17% Similarity=0.097 Sum_probs=83.1
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCCcEE------ecCCCCCC---CCCCCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFPAVV------SPLGNRRL---PFPSGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~~i~------~~~dt~~L---PFpD~SFDl 375 (689)
...+|||||||||.++..|+.. .|+++|+++. |++.|+++...... .......+ +|++.+||+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~-----ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~ 111 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTN-----QLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDV 111 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCC-----CCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECC
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHH-----HHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEE
Confidence 3568999999999999888764 5899999986 44455554322111 01111122 234456666
Q ss_pred EEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCC-------------------chhHHHHHHHHHHhcceeEEEee
Q 044932 376 IHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD-------------------SIEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~-------------------~le~~~~ie~La~~l~W~~v~~~ 436 (689)
++++. ..+|.++.|+|||||+|++...+. .....+.+..+++..+|.+....
T Consensus 112 v~~~l---------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 112 SFISL---------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp SSSCG---------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred EhhhH---------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 54431 479999999999999999973210 01123568888999999987654
Q ss_pred cccc-----CceeEEEEEeC
Q 044932 437 TDEI-----SEMGVKIYQKP 451 (689)
Q Consensus 437 ~~~~-----g~~~i~IwqKp 451 (689)
..+. +..+++.++|.
T Consensus 183 ~~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 183 FSPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp ECSSCBTTTBCCEEEEEEES
T ss_pred EccCCCCCCCHHHHHHHhhc
Confidence 4322 34567777774
No 84
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.24 E-value=9.5e-11 Score=113.35 Aligned_cols=140 Identities=17% Similarity=0.055 Sum_probs=92.0
Q ss_pred CCCeEEEECCc-cchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCC-CCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSA-DLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNR-RLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCG-tGsfaa~La~---~~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~-~LPFpD~SFDlVhc 378 (689)
...+|||+||| +|.++..++. ..|+++|+++. +++.|.+ .++...+...+.. -.++++++||+|+|
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEE-----FFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHH-----HHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHH-----HHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEE
Confidence 35789999999 9998877764 35999999874 4444443 4554455555543 33577899999998
Q ss_pred cccccccc------------------ccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeecccc
Q 044932 379 DGCSITWH------------------AHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEI 440 (689)
Q Consensus 379 s~cli~W~------------------~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~ 440 (689)
....++.. .....+|.++.|+|||||+|++..+... .....+.++++..+|..........
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHHcCCceEEEEecCC
Confidence 63221100 0126789999999999999999876532 2234577788888997654433222
Q ss_pred -CceeEEEEEeCCC
Q 044932 441 -SEMGVKIYQKPES 453 (689)
Q Consensus 441 -g~~~i~IwqKp~~ 453 (689)
....+++|+|...
T Consensus 209 ~~~~~~l~f~~~~~ 222 (230)
T 3evz_A 209 TRWRHSLIFFKGIS 222 (230)
T ss_dssp C-CEEEEEEECCC-
T ss_pred CeEEEEEEEecccc
Confidence 2344777877543
No 85
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.24 E-value=1.9e-11 Score=119.62 Aligned_cols=98 Identities=17% Similarity=0.102 Sum_probs=68.2
Q ss_pred CCCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCC----CCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRR----LPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~----LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..|+. ..|+|+|+++... ..+++.|..+. .......+... +|++ ++||+|+|.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l-~~~~~~a~~~~-~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPF-EKLLELVRERN-NIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHH-HHHHHHHHHCS-SEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHHhcCC-CeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 356899999999998877664 3599999988532 34556665542 22333344444 3566 899999986
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
. ........+|.++.|+|||||+|++..+
T Consensus 134 ~---~~~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 I---AQKNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp C---CSTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c---cChhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 2 2122344569999999999999999853
No 86
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.24 E-value=6.7e-11 Score=111.25 Aligned_cols=128 Identities=12% Similarity=0.129 Sum_probs=87.6
Q ss_pred CCeEEEECCccchhHHHhhcC-CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK-EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWHA 387 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~ 387 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .|++. ..++. +...+... ++++++||+|+|..... |..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~-----~~~~~--~~~~~--~~~~d~~~-~~~~~~fD~i~~n~~~~-~~~ 92 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRNTVVSTDLNI-----RALES--HRGGN--LVRADLLC-SINQESVDVVVFNPPYV-PDT 92 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTSEEEEEESCH-----HHHHT--CSSSC--EEECSTTT-TBCGGGCSEEEECCCCB-TTC
T ss_pred CCeEEEeccCccHHHHHHHhcCcEEEEECCH-----HHHhc--ccCCe--EEECChhh-hcccCCCCEEEECCCCc-cCC
Confidence 458999999999999998876 688999876 45554 22232 33445444 67789999999864432 222
Q ss_pred ---------cHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEe
Q 044932 388 ---------HGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQK 450 (689)
Q Consensus 388 ---------d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqK 450 (689)
+...++.++.+.| |||++++...... ....+.++++..+|..........+...+.+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~ 161 (170)
T 3q87_B 93 DDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--RPKEVLARLEERGYGTRILKVRKILGETVYIIKG 161 (170)
T ss_dssp CCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--CHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEE
T ss_pred ccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--CHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEE
Confidence 2357899999999 9999999875422 2235778888999987655554444444444443
No 87
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.23 E-value=5.8e-11 Score=112.22 Aligned_cols=139 Identities=10% Similarity=0.022 Sum_probs=88.8
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCC--CcEEecCCCCCCC-CCCCCcceE
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGF--PAVVSPLGNRRLP-FPSGVFDAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL--~~i~~~~dt~~LP-FpD~SFDlV 376 (689)
..+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .|+ ...+...+...++ +.+++||+|
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDK-----AIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHH-----HHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 468999999999988877653 5899998864 4444443 354 2345556666665 667999999
Q ss_pred Eeccccccc--------cccHHHHHHHHHhccCCCcEEEEEcCCC---chhHHHHHHHHHHhc---ceeEEEeeccc--c
Q 044932 377 HCDGCSITW--------HAHGGKLLLEMNRILRPSGYFILSTKHD---SIEEEEALTTLTASI---CWNILAHKTDE--I 440 (689)
Q Consensus 377 hcs~cli~W--------~~d~~~aL~EI~RVLRPGG~fVIsdp~~---~le~~~~ie~La~~l---~W~~v~~~~~~--~ 440 (689)
++....++. ..+...+|.++.|+|||||++++..... .......+..++..+ +|.......-. .
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~ 177 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQAN 177 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCS
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCcc
Confidence 986433221 1134579999999999999999986432 222334455555544 47665443321 2
Q ss_pred CceeEEEEEeCC
Q 044932 441 SEMGVKIYQKPE 452 (689)
Q Consensus 441 g~~~i~IwqKp~ 452 (689)
....+.+-+|..
T Consensus 178 ~pp~~~~~~~~~ 189 (197)
T 3eey_A 178 CPPILVCIEKIS 189 (197)
T ss_dssp CCCEEEEEEECC
T ss_pred CCCeEEEEEEcc
Confidence 234566666643
No 88
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.23 E-value=8.6e-11 Score=116.37 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=70.4
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCc------ccHHHHHHHHHHcCCC--cEEecCC---CCCCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLK------DDLVDLAQVALERGFP--AVVSPLG---NRRLPFPSG 371 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~------D~seamlq~A~eRGL~--~i~~~~d---t~~LPFpD~ 371 (689)
...+|||||||+|.++..|+. ..|+++|+++. .. ..+.+.+...++. ..+...+ ...+||+++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTL-GQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCH-HHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHH-HHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 457999999999999887764 35899999874 22 1222222233442 3344455 567789999
Q ss_pred CcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 372 VFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 372 SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
+||+|+|..++. +..++..++..+.++++|||++++.+
T Consensus 122 ~fD~v~~~~~l~-~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 122 HFDRVVLAHSLW-YFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CCSEEEEESCGG-GSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CEEEEEEccchh-hCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 999999886654 45667776666777777799999975
No 89
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.22 E-value=6.7e-11 Score=114.13 Aligned_cols=119 Identities=18% Similarity=0.222 Sum_probs=83.8
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCC--CCCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLP--FPSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LP--FpD~SFDlVh 377 (689)
..+|||+|||+|.++..|+. ..|+++|+++. +++.|.+ .++. ..+...+...++ |++++||+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~-----~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKS-----VLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHH-----HHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHH-----HHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 46899999999999887764 35999999874 4444433 3554 334456666677 8889999999
Q ss_pred eccccccccc--------cHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEe
Q 044932 378 CDGCSITWHA--------HGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 378 cs~cli~W~~--------d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~ 435 (689)
+... .+|.. ....+|.++.|+|+|||+|++....... ...+.+++...+|..+..
T Consensus 117 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 117 LNFS-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGL--FEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp EESC-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHH--HHHHHHHHHHHTCEEEEE
T ss_pred EECC-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHH--HHHHHHHHHHCCCeeeec
Confidence 8643 34432 1247999999999999999998754222 234566677778876544
No 90
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.22 E-value=3.4e-11 Score=117.37 Aligned_cols=118 Identities=10% Similarity=0.140 Sum_probs=81.5
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCC--CCCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLP--FPSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LP--FpD~SFDlVh 377 (689)
..+|||||||+|.++..|+. ..|+|+|+++. +++.|.+ .++. ..+...|...++ |++++||.|+
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~-----~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKS-----VIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHH-----HHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechH-----HHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 46899999999999888774 35899998864 4444443 4664 345556666676 8889999998
Q ss_pred ecccccccccc--------HHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 378 CDGCSITWHAH--------GGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 378 cs~cli~W~~d--------~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
+... .+|... ...+|.++.|+|||||+|++.+...... ..+.+++...+|....
T Consensus 114 ~~~~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~--~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 114 LNFS-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLF--EYSLKSFSEYGLLLTY 175 (213)
T ss_dssp EESC-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHH--HHHHHHHHHHTCEEEE
T ss_pred EECC-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHH--HHHHHHHHHCCCcccc
Confidence 7532 244321 2578999999999999999987543221 2345555666776543
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.21 E-value=4e-11 Score=122.34 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=73.6
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc-----------CC-CcEEecCCCCCCC----CC
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER-----------GF-PAVVSPLGNRRLP----FP 369 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR-----------GL-~~i~~~~dt~~LP----Fp 369 (689)
..+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++ +. ...+...|...++ |+
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIAD-----VSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR 109 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCH-----HHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCH-----HHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc
Confidence 568999999999998888743 589999886 455555543 11 2334556666665 64
Q ss_pred --CCCcceEEecccccccc-c---cHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 370 --SGVFDAIHCDGCSITWH-A---HGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 370 --D~SFDlVhcs~cli~W~-~---d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
+++||+|+|.. .+||. . +...+|.++.|+|||||+|+++.+..
T Consensus 110 ~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 110 DPQMCFDICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp STTCCEEEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cCCCCEEEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 45999999976 45666 3 34689999999999999999998763
No 92
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.20 E-value=4.1e-11 Score=113.27 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=70.8
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCC--CCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLP--FPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LP--FpD~SFDlVh 377 (689)
...+|||+|||+|.++..++.. .|+++|+++. |++.|.+ .++. ..+...|...++ +++++||+|+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQR-----SAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHH-----HHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHH-----HHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEE
Confidence 3578999999999998866643 4899999874 4444443 3553 334455544443 5578999999
Q ss_pred eccccccccccHHHHHHHHHh--ccCCCcEEEEEcCC
Q 044932 378 CDGCSITWHAHGGKLLLEMNR--ILRPSGYFILSTKH 412 (689)
Q Consensus 378 cs~cli~W~~d~~~aL~EI~R--VLRPGG~fVIsdp~ 412 (689)
+.....+...+...+|.++.+ +|+|||+|++..+.
T Consensus 119 ~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 119 ADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred ECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 864322212457789999999 99999999998754
No 93
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.20 E-value=1.4e-11 Score=116.15 Aligned_cols=149 Identities=12% Similarity=0.039 Sum_probs=84.8
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCC
Q 044932 291 HYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLG 362 (689)
Q Consensus 291 ~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~d 362 (689)
.+++.+.+.++.. ....+|||+|||+|.++..++.. .|+++|+++. +++.|.++ ++...+...|
T Consensus 16 ~~~~~~~~~l~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~d 87 (215)
T 4dzr_A 16 VLVEEAIRFLKRM---PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMD-----ALAVARRNAERFGAVVDWAAAD 87 (215)
T ss_dssp HHHHHHHHHHTTC---CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHH
T ss_pred HHHHHHHHHhhhc---CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHH-----HHHHHHHHHHHhCCceEEEEcc
Confidence 3444455444321 14579999999999998877754 5899999874 44444433 3222233333
Q ss_pred CCCCCCCC-----CCcceEEecccccccc------cc-------------------HHHHHHHHHhccCCCcE-EEEEcC
Q 044932 363 NRRLPFPS-----GVFDAIHCDGCSITWH------AH-------------------GGKLLLEMNRILRPSGY-FILSTK 411 (689)
Q Consensus 363 t~~LPFpD-----~SFDlVhcs~cli~W~------~d-------------------~~~aL~EI~RVLRPGG~-fVIsdp 411 (689)
... ++++ ++||+|+|....++.. .. ...+|.++.|+|||||+ +++..+
T Consensus 88 ~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 88 GIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 333 5665 8999999842111100 00 05788999999999999 555555
Q ss_pred CCchhHHHHHHHHHH--hcceeEEEeeccccCceeEEEEEeC
Q 044932 412 HDSIEEEEALTTLTA--SICWNILAHKTDEISEMGVKIYQKP 451 (689)
Q Consensus 412 ~~~le~~~~ie~La~--~l~W~~v~~~~~~~g~~~i~IwqKp 451 (689)
.... ..+..++. ..+|..+....+..+...+.+++|.
T Consensus 167 ~~~~---~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 167 HNQA---DEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp TSCH---HHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEEC
T ss_pred CccH---HHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEc
Confidence 4332 34667777 7788765544443445566666664
No 94
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.20 E-value=1.2e-10 Score=120.52 Aligned_cols=139 Identities=11% Similarity=0.168 Sum_probs=95.4
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCCCC-CCCCCcceEEeccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRRLP-FPSGVFDAIHCDGC 381 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~LP-FpD~SFDlVhcs~c 381 (689)
..+|||||||+|.++..++.. .++++|+ |... ....+.+...++. ..+...+....+ ++.+.||+|+|..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTR-DAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGH-HHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHH-HHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 679999999999998888753 5788888 5322 2222333334543 234445555554 23467999999877
Q ss_pred cccccc-cHHHHHHHHHhccCCCcEEEEEcCC-------Cc-----------------hhHHHHHHHHHHhcceeEEEee
Q 044932 382 SITWHA-HGGKLLLEMNRILRPSGYFILSTKH-------DS-----------------IEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 382 li~W~~-d~~~aL~EI~RVLRPGG~fVIsdp~-------~~-----------------le~~~~ie~La~~l~W~~v~~~ 436 (689)
+.+|.. +...+|.++.|+|+|||+|+|.+.. .. ......+..+++..+|+.+..
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~- 336 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER- 336 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE-
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee-
Confidence 766543 2378999999999999999997631 00 001346889999999998763
Q ss_pred ccccCceeEEEEEeCC
Q 044932 437 TDEISEMGVKIYQKPE 452 (689)
Q Consensus 437 ~~~~g~~~i~IwqKp~ 452 (689)
..+...+.+.+||.
T Consensus 337 --~~g~~~l~~a~kp~ 350 (352)
T 3mcz_A 337 --SIGRYTLLIGQRSS 350 (352)
T ss_dssp --EETTEEEEEEECCC
T ss_pred --ccCceEEEEEecCC
Confidence 23566788999985
No 95
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.19 E-value=6.8e-11 Score=123.76 Aligned_cols=134 Identities=12% Similarity=0.064 Sum_probs=86.5
Q ss_pred CCCeEEEECCccchhHHHhh----cCCeEEEEcCCcccHHHHHHHHHHc----CCC-cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLL----AKEVLTLTVGLKDDLVDLAQVALER----GFP-AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La----~~~V~gmDIsp~D~seamlq~A~eR----GL~-~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||||||+|.+++.++ +..|+++|++| .|++.|+++ |+. ..+...++..+| +++||+|++
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~-----~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEP-----DIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSH-----HHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEE
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCH-----HHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEE
Confidence 46899999999997764432 34699999987 455555543 663 234455665655 799999997
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhH-HHHHHHHHHhcceeEEEeeccccC-ceeEEEEEeCCC
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEE-EEALTTLTASICWNILAHKTDEIS-EMGVKIYQKPES 453 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~-~~~ie~La~~l~W~~v~~~~~~~g-~~~i~IwqKp~~ 453 (689)
... ..+...++.++.|+|||||+|++...+..... ...+.. ...-+|........+.. .+.+++++|...
T Consensus 195 ~a~----~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~-~~~~gf~~~~~~~p~~~v~N~vv~a~k~~~ 266 (298)
T 3fpf_A 195 AAL----AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD-DDITGFRRAGVVLPSGKVNNTSVLVFKCPD 266 (298)
T ss_dssp CTT----CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT-GGGTTEEEEEEECCCTTCCCEEEEEEECC-
T ss_pred CCC----ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh-hhhhhhhheeEECCCCCcCcEEEEEEccCC
Confidence 532 35788999999999999999999986643210 000000 12227877654443222 345777787543
No 96
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.19 E-value=2.4e-11 Score=120.35 Aligned_cols=122 Identities=14% Similarity=0.182 Sum_probs=77.2
Q ss_pred CCCeEEEECCccchhHHHhhc--C--CeEEEEcCCcccHHHHHHHH---HH----cCCC-cEEecCCCCCCCCCCCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLA--K--EVLTLTVGLKDDLVDLAQVA---LE----RGFP-AVVSPLGNRRLPFPSGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~--~--~V~gmDIsp~D~seamlq~A---~e----RGL~-~i~~~~dt~~LPFpD~SFDl 375 (689)
...+|||||||+|.++..|+. . .|+|+|+++. .|++.| .+ .+++ ..+...+...+|. ..||.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~----~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--~~~d~ 97 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKE----NLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--ELKNI 97 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCG----GGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG--GGTTC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHH----HHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh--hccCe
Confidence 356899999999999988873 2 4899999963 344444 32 3554 3455667777753 23344
Q ss_pred EEecccccccc-------ccHHHHHHHHHhccCCCcEEEEEcCC-------C--------chhHH---HHHHHHHHhcce
Q 044932 376 IHCDGCSITWH-------AHGGKLLLEMNRILRPSGYFILSTKH-------D--------SIEEE---EALTTLTASICW 430 (689)
Q Consensus 376 Vhcs~cli~W~-------~d~~~aL~EI~RVLRPGG~fVIsdp~-------~--------~le~~---~~ie~La~~l~W 430 (689)
|.+..+.++|. .+...+|.|+.|+|||||+|++.... . ....+ .++..++...+|
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf 177 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGF 177 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTC
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCC
Confidence 44332223332 12356899999999999999992210 0 00011 237788888899
Q ss_pred eEEEe
Q 044932 431 NILAH 435 (689)
Q Consensus 431 ~~v~~ 435 (689)
.+...
T Consensus 178 ~v~~~ 182 (225)
T 3p2e_A 178 RIDDV 182 (225)
T ss_dssp EEEEE
T ss_pred Ceeee
Confidence 87654
No 97
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.19 E-value=1.6e-10 Score=106.50 Aligned_cols=114 Identities=17% Similarity=0.150 Sum_probs=77.7
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----CCC-cEEecCCC-CCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----GFP-AVVSPLGN-RRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----GL~-~i~~~~dt-~~LPFpD~SFDlVh 377 (689)
...+|||+|||+|.++..++.. .|+++|+++ .+++.|.++ ++. .++...+. ..+|..+++||+|+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~ 99 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISE-----ERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIF 99 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCH-----HHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCH-----HHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEE
Confidence 3568999999999999888765 488898876 455555543 554 22333333 33444348999999
Q ss_pred eccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEE
Q 044932 378 CDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 378 cs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v 433 (689)
+.... ++ ..+|.++.|+|||||++++..... .....+..+++..++...
T Consensus 100 ~~~~~-~~----~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 100 IGGGL-TA----PGVFAAAWKRLPVGGRLVANAVTV--ESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp ECC-T-TC----TTHHHHHHHTCCTTCEEEEEECSH--HHHHHHHHHHHHHCCEEE
T ss_pred ECCcc-cH----HHHHHHHHHhcCCCCEEEEEeecc--ccHHHHHHHHHHcCCeeE
Confidence 87544 32 479999999999999999987642 222345566666666553
No 98
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.19 E-value=1.2e-10 Score=110.57 Aligned_cols=127 Identities=9% Similarity=0.004 Sum_probs=84.0
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEec
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
..+|||+|||+|.++..++. ..|+++|+++. +++.|.+ .++. ..+...+...++ ++++||+|+|.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGK-----RVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHH-----HHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECS
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHH-----HHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEe
Confidence 46899999999998877764 35899998864 4444443 3554 334455555554 46899999974
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEee----ccccCceeEEEEEeC
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHK----TDEISEMGVKIYQKP 451 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~----~~~~g~~~i~IwqKp 451 (689)
. . .+...++.++.++|+|||++++........ .+..+.. +|..+... .+..+...+.+++|.
T Consensus 140 ~-~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 140 A-F----ASLNDMVSWCHHLPGEQGRFYALKGQMPED---EIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp C-S----SSHHHHHHHHTTSEEEEEEEEEEESSCCHH---HHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred c-c----CCHHHHHHHHHHhcCCCcEEEEEeCCCchH---HHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3 1 356789999999999999999986554322 3555554 78775422 111233456666653
No 99
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.18 E-value=1.3e-10 Score=116.49 Aligned_cols=145 Identities=14% Similarity=0.110 Sum_probs=93.2
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLP 367 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LP 367 (689)
..+++.|..++. ...+|||+|||+|.++..++.. .|+++|++|... ....+.+...++...+...+... +
T Consensus 108 ~~~~~~l~~~~~------~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v-~~a~~n~~~~~~~v~~~~~d~~~-~ 179 (254)
T 2nxc_A 108 RLALKALARHLR------PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVL-PQAEANAKRNGVRPRFLEGSLEA-A 179 (254)
T ss_dssp HHHHHHHHHHCC------TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGH-HHHHHHHHHTTCCCEEEESCHHH-H
T ss_pred HHHHHHHHHhcC------CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHH-HHHHHHHHHcCCcEEEEECChhh-c
Confidence 345555555432 3578999999999998777654 599999998533 22223333446543333333322 2
Q ss_pred CCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEE
Q 044932 368 FPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKI 447 (689)
Q Consensus 368 FpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~I 447 (689)
+++++||+|+|... .+ ....++.++.|+|||||++++++.... ....+..+++..+|+.+..... +.-..++
T Consensus 180 ~~~~~fD~Vv~n~~-~~---~~~~~l~~~~~~LkpgG~lils~~~~~--~~~~v~~~l~~~Gf~~~~~~~~--~~W~~l~ 251 (254)
T 2nxc_A 180 LPFGPFDLLVANLY-AE---LHAALAPRYREALVPGGRALLTGILKD--RAPLVREAMAGAGFRPLEEAAE--GEWVLLA 251 (254)
T ss_dssp GGGCCEEEEEEECC-HH---HHHHHHHHHHHHEEEEEEEEEEEEEGG--GHHHHHHHHHHTTCEEEEEEEE--TTEEEEE
T ss_pred CcCCCCCEEEECCc-HH---HHHHHHHHHHHHcCCCCEEEEEeeccC--CHHHHHHHHHHCCCEEEEEecc--CCeEEEE
Confidence 55789999998532 12 245889999999999999999865422 2345778888889988654332 3333444
Q ss_pred EEe
Q 044932 448 YQK 450 (689)
Q Consensus 448 wqK 450 (689)
++|
T Consensus 252 ~~k 254 (254)
T 2nxc_A 252 YGR 254 (254)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 100
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.18 E-value=1.1e-10 Score=122.68 Aligned_cols=139 Identities=10% Similarity=0.044 Sum_probs=93.7
Q ss_pred CCCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHHc----CCC--cEEecCCCCCC--CCCCCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALER----GFP--AVVSPLGNRRL--PFPSGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~eR----GL~--~i~~~~dt~~L--PFpD~SFDl 375 (689)
...+|||||||+|.++..|+. ..++++|+ | .+++.|.++ ++. ..+...|.... |+| ++||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-P-----QQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-H-----HHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-H-----HHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCE
Confidence 357999999999999988875 24888887 4 356666553 432 23444554443 677 89999
Q ss_pred EEeccccccccc-cHHHHHHHHHhccCCCcEEEEEcCC--C--ch-----------------------hHHHHHHHHHHh
Q 044932 376 IHCDGCSITWHA-HGGKLLLEMNRILRPSGYFILSTKH--D--SI-----------------------EEEEALTTLTAS 427 (689)
Q Consensus 376 Vhcs~cli~W~~-d~~~aL~EI~RVLRPGG~fVIsdp~--~--~l-----------------------e~~~~ie~La~~ 427 (689)
|++..++.+|.. +...+|.++.|+|||||+|+|.+.. . .. ....++..+++.
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 331 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIEN 331 (363)
T ss_dssp EEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHT
T ss_pred EEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHH
Confidence 999887766653 3357899999999999999997632 0 00 023568889999
Q ss_pred cceeEEEeeccccCceeEEEEEeCCC
Q 044932 428 ICWNILAHKTDEISEMGVKIYQKPES 453 (689)
Q Consensus 428 l~W~~v~~~~~~~g~~~i~IwqKp~~ 453 (689)
.+|+.+...........+..++|..+
T Consensus 332 AGf~~v~~~~~~g~~~svi~~~~~~~ 357 (363)
T 3dp7_A 332 AGLEVEEIQDNIGLGHSILQCRLKEG 357 (363)
T ss_dssp TTEEESCCCCCBTTTBEEEEEEEC--
T ss_pred cCCeEEEEEeCCCCCceEEEEeeccc
Confidence 99998765433323344555555433
No 101
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=7.5e-11 Score=123.91 Aligned_cols=114 Identities=14% Similarity=0.148 Sum_probs=81.8
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNR 364 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~ 364 (689)
..|.+.|..... +. ...+|||||||+|.++..++.. .|+|+|+++ .. ..+.+.+...++. ..+...+..
T Consensus 52 ~~~~~~i~~~~~-~~---~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l-~~a~~~~~~~~~~~~v~~~~~d~~ 125 (349)
T 3q7e_A 52 LTYRNSMFHNRH-LF---KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-IS-DYAVKIVKANKLDHVVTIIKGKVE 125 (349)
T ss_dssp HHHHHHHHTCHH-HH---TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhccc-cC---CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HH-HHHHHHHHHcCCCCcEEEEECcHH
Confidence 455555554322 11 3578999999999998888765 599999984 22 3334445556765 455667778
Q ss_pred CCCCCCCCcceEEecc--ccccccccHHHHHHHHHhccCCCcEEEEE
Q 044932 365 RLPFPSGVFDAIHCDG--CSITWHAHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 365 ~LPFpD~SFDlVhcs~--cli~W~~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
.+++++++||+|+|.. ..+.+......+|.++.|+|||||++++.
T Consensus 126 ~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 126 EVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred HccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 8899999999999853 22334567789999999999999999844
No 102
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.18 E-value=3.3e-11 Score=117.66 Aligned_cols=99 Identities=11% Similarity=-0.056 Sum_probs=73.0
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCC--CcEEecCCCCCCCCCC-----CCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGF--PAVVSPLGNRRLPFPS-----GVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL--~~i~~~~dt~~LPFpD-----~SFDlVhc 378 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++.- ...+...+...++++. ..||+|+|
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSK-----SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCH-----HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCH-----HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEE
Confidence 3468999999999999888754 699999876 57777777532 3344555655554431 34999998
Q ss_pred ccccccccc--cHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 379 DGCSITWHA--HGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 379 s~cli~W~~--d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
..++ ++.. +...+|.++.|+|||||+++|.+..
T Consensus 131 ~~~~-~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 131 RTGF-HHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp ESSS-TTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cchh-hcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7554 4444 6789999999999999999888754
No 103
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.18 E-value=8.8e-11 Score=120.28 Aligned_cols=116 Identities=15% Similarity=0.061 Sum_probs=78.4
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCC-----CCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPF-----PSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPF-----pD~SFDlVhcs~ 380 (689)
...+|||||||+|.++..|+.+ .|+++|+++ .|++.|+++.-.. ....+...+++ .+++||+|+|..
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~-----~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGASVTVFDFSQ-----RMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDR 118 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEES
T ss_pred CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCH-----HHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhh
Confidence 3578999999999999888865 589999875 6888888763221 11111122222 257999999987
Q ss_pred cccccc-ccHHHHHHHHHhccCCCcEEEEEcCCCchhH-HHHHHHHHHhcce
Q 044932 381 CSITWH-AHGGKLLLEMNRILRPSGYFILSTKHDSIEE-EEALTTLTASICW 430 (689)
Q Consensus 381 cli~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~-~~~ie~La~~l~W 430 (689)
.+.++. .+...+|.++.|+| |||+++++.+...... ...+........|
T Consensus 119 ~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~ 169 (261)
T 3iv6_A 119 LINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTL 169 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCH
T ss_pred hhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCe
Confidence 655543 35567999999999 9999999987654432 2234444444333
No 104
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.17 E-value=3.4e-11 Score=122.69 Aligned_cols=99 Identities=19% Similarity=0.265 Sum_probs=70.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCC-----------------------------
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGF----------------------------- 354 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL----------------------------- 354 (689)
...+|||||||+|.++..|+.. .|+|+|+++ .|++.|.++--
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~-----~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDS-----RLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCH-----HHHHHHHHTC------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCH-----HHHHHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 3579999999999998887753 589999986 46666665411
Q ss_pred ----------------------------------CcEEecCCCCC-----CCCCCCCcceEEecccccccc------ccH
Q 044932 355 ----------------------------------PAVVSPLGNRR-----LPFPSGVFDAIHCDGCSITWH------AHG 389 (689)
Q Consensus 355 ----------------------------------~~i~~~~dt~~-----LPFpD~SFDlVhcs~cli~W~------~d~ 389 (689)
...+...+... +++.+++||+|+|..++ +|. .+.
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl-~~ihl~~~~~~~ 199 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLT-KWVHLNWGDEGL 199 (292)
T ss_dssp ---------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCH-HHHHHHHHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHH-HHhhhcCCHHHH
Confidence 11222333222 23678999999997654 332 256
Q ss_pred HHHHHHHHhccCCCcEEEEEcCC
Q 044932 390 GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 390 ~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
..+|.++.|+|||||+|++...+
T Consensus 200 ~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 200 KRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHHHHhCCCcEEEEecCC
Confidence 78999999999999999997543
No 105
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.17 E-value=1e-10 Score=112.51 Aligned_cols=126 Identities=21% Similarity=0.269 Sum_probs=85.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||||||+|.++..|+.. .|+++|+++.+.. ...+.|.+ .+++ ..+...+...+||++++ |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~-~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRME-KISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGH-HHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHH-HHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 3568999999999999888754 5999999986442 12222322 3443 34556777889998887 88764
Q ss_pred cc--ccc--cccccHHHHHHHHHhccCCCcEEEEEcCC--------------Cch-h-HHHHHHHHHHhcceeEEEe
Q 044932 379 DG--CSI--TWHAHGGKLLLEMNRILRPSGYFILSTKH--------------DSI-E-EEEALTTLTASICWNILAH 435 (689)
Q Consensus 379 s~--cli--~W~~d~~~aL~EI~RVLRPGG~fVIsdp~--------------~~l-e-~~~~ie~La~~l~W~~v~~ 435 (689)
.. +.. ++..++..+|.++.|+|||||+|+++... ... . ..+.+..++...+|++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 32 111 13455679999999999999999997421 000 1 1234778889999987643
No 106
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.16 E-value=4.1e-11 Score=118.08 Aligned_cols=104 Identities=18% Similarity=0.156 Sum_probs=72.9
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCc-EEecCCCCC-CC--CCCCCcceEEecc
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPA-VVSPLGNRR-LP--FPSGVFDAIHCDG 380 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~-i~~~~dt~~-LP--FpD~SFDlVhcs~ 380 (689)
..+|||||||+|.++..|+.. .|+|+|+++..+ ..+.+.+.+.++.. .+...|+.. ++ |++++||+|++..
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l-~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGV-GACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHH-HHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHH-HHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 568999999999998888742 499999987432 12223334456653 344556555 34 7899999999763
Q ss_pred ccccccccH--------HHHHHHHHhccCCCcEEEEEcCCCc
Q 044932 381 CSITWHAHG--------GKLLLEMNRILRPSGYFILSTKHDS 414 (689)
Q Consensus 381 cli~W~~d~--------~~aL~EI~RVLRPGG~fVIsdp~~~ 414 (689)
. .+|.... ..+|.++.|+|||||+|++.+....
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 2 3454322 1599999999999999999886643
No 107
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.16 E-value=1.1e-10 Score=113.95 Aligned_cols=122 Identities=18% Similarity=0.151 Sum_probs=81.3
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCC---CCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRR---LPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~---LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..|+. ..|+++|+++... ..+++.|..+ ....+...+... +|+++++||+|+|.
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i-~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSG-RDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 356899999999999887764 3599999987422 3456666664 223344455544 56677899999985
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcCCCc------hh--HHHHHHHHHHhcceeEEEe
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDS------IE--EEEALTTLTASICWNILAH 435 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~------le--~~~~ie~La~~l~W~~v~~ 435 (689)
.. . ......++.++.|+|||||+|+++..+.. .. .... .++++..+|+.+..
T Consensus 155 ~~-~--~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~ 214 (233)
T 2ipx_A 155 VA-Q--PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQ 214 (233)
T ss_dssp CC-C--TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEE
T ss_pred CC-C--ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEEE
Confidence 33 1 12224568889999999999999754311 00 0112 36677889987653
No 108
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.16 E-value=2.8e-10 Score=118.62 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=93.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||||||+|.++..|+.. .++++|+ |.... ...+.+.+.++. ..+...|...+|+++. |+|++..+
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~v 265 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAID-LVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRI 265 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHH-HHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESC
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHH-HHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEech
Confidence 4679999999999998888753 5899998 75332 222223333554 3445566666788754 99999877
Q ss_pred cccccc-cHHHHHHHHHhccCCCcEEEEEcCCC--------------------ch-----hHHHHHHHHHHhcceeEEEe
Q 044932 382 SITWHA-HGGKLLLEMNRILRPSGYFILSTKHD--------------------SI-----EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 382 li~W~~-d~~~aL~EI~RVLRPGG~fVIsdp~~--------------------~l-----e~~~~ie~La~~l~W~~v~~ 435 (689)
+.+|.. +...+|.++.|+|||||+|+|.+... .. ...+++.++++..+|+.+..
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~ 345 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTM 345 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEE
Confidence 766643 36789999999999999998876210 00 12245778888889987654
Q ss_pred eccccCceeEEEEEeC
Q 044932 436 KTDEISEMGVKIYQKP 451 (689)
Q Consensus 436 ~~~~~g~~~i~IwqKp 451 (689)
.... ...+.+++||
T Consensus 346 ~~~~--~~~vi~a~kp 359 (359)
T 1x19_A 346 VRKY--DHLLVQAVKP 359 (359)
T ss_dssp EEET--TEEEEEEECC
T ss_pred EecC--CceEEEEeCC
Confidence 4322 4456777775
No 109
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.15 E-value=7e-10 Score=107.59 Aligned_cols=114 Identities=15% Similarity=0.076 Sum_probs=78.9
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|++ .|+. ..+...+..........||+|++.
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~-----~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~ 129 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRAD-----RIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIG 129 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEEC
Confidence 3578999999999998877754 5899998863 4555443 4665 334455554422223589999976
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
... +.. +|.++.|+|||||+|++..... .....+.++++..+++...
T Consensus 130 ~~~-----~~~-~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 130 GGG-----SQA-LYDRLWEWLAPGTRIVANAVTL--ESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp SCC-----CHH-HHHHHHHHSCTTCEEEEEECSH--HHHHHHHHHHHHHCSEEEE
T ss_pred Ccc-----cHH-HHHHHHHhcCCCcEEEEEecCc--ccHHHHHHHHHhCCCcEEE
Confidence 422 455 9999999999999999987652 2334466667777776543
No 110
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.14 E-value=5.7e-10 Score=106.42 Aligned_cols=113 Identities=10% Similarity=0.013 Sum_probs=79.3
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCCc-EEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFPA-VVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~~-i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++.. .+...+.........+||+|++
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~ 114 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQ-----YLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFI 114 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHH-----HHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHH-----HHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEE
Confidence 3578999999999998877743 4899998874 4444443 35542 3334444333223378999998
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhccee
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWN 431 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~ 431 (689)
.... + +...+|.++.|+|||||+|++..... .....+..+++..+|.
T Consensus 115 ~~~~-~---~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 115 GGSG-G---MLEEIIDAVDRRLKSEGVIVLNAVTL--DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp SCCT-T---CHHHHHHHHHHHCCTTCEEEEEECBH--HHHHHHHHHHHHTTCE
T ss_pred CCCC-c---CHHHHHHHHHHhcCCCeEEEEEeccc--ccHHHHHHHHHHCCCc
Confidence 6533 2 56799999999999999999987642 2334577788888884
No 111
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.14 E-value=5.7e-10 Score=114.94 Aligned_cols=133 Identities=15% Similarity=0.124 Sum_probs=90.7
Q ss_pred CCCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||||||+|.++..++. ..++++|+ | .+++.|.+ .++. ..+...|.. .|+|. +||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-Q-----GPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-H-----HHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEE
Confidence 457999999999999888875 24788887 5 34444443 3543 334444543 56775 899999
Q ss_pred ecccccccccc-HHHHHHHHHhccCCCcEEEEEcCC--C----ch-------------hHHHHHHHHHHhcceeEEEeec
Q 044932 378 CDGCSITWHAH-GGKLLLEMNRILRPSGYFILSTKH--D----SI-------------EEEEALTTLTASICWNILAHKT 437 (689)
Q Consensus 378 cs~cli~W~~d-~~~aL~EI~RVLRPGG~fVIsdp~--~----~l-------------e~~~~ie~La~~l~W~~v~~~~ 437 (689)
|..++++|... ...+|.++.|+|+|||+|+|.+.. . .. ...+++..+++..+|+.+....
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 98877666532 478999999999999999998642 1 00 0135688899999998876543
Q ss_pred cccCceeEEEEEe
Q 044932 438 DEISEMGVKIYQK 450 (689)
Q Consensus 438 ~~~g~~~i~IwqK 450 (689)
. .+ ..+..+++
T Consensus 321 ~-~~-~~vie~r~ 331 (332)
T 3i53_A 321 I-SY-VSIVEMTA 331 (332)
T ss_dssp C-SS-SEEEEEEE
T ss_pred C-CC-cEEEEEee
Confidence 2 22 44555553
No 112
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.14 E-value=3.8e-10 Score=113.46 Aligned_cols=134 Identities=13% Similarity=-0.026 Sum_probs=89.7
Q ss_pred CCCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCC---CCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFP---SGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFp---D~SFDl 375 (689)
...+|||||||+|.++..|+. ..|+++|+++. ++++|.+ .|+. ..+...+.+.+++. +++||+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRK-----KVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHH-----HHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHH-----HHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceE
Confidence 357899999999988776653 35999998864 4444443 3664 34445555555543 489999
Q ss_pred EEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeecccc----CceeEEEEEeC
Q 044932 376 IHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEI----SEMGVKIYQKP 451 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~----g~~~i~IwqKp 451 (689)
|+|... .+...++.++.|+|||||+|++.......++...+...++.++|.......-.. +.-.+.+++|.
T Consensus 155 I~s~a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~ 229 (249)
T 3g89_A 155 AVARAV-----APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKT 229 (249)
T ss_dssp EEEESS-----CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEECCc-----CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeC
Confidence 998532 245689999999999999999876544444444566777888998754432211 22346666663
No 113
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.13 E-value=6.9e-10 Score=116.80 Aligned_cols=135 Identities=14% Similarity=0.184 Sum_probs=91.6
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||||||+|.++..|+.. .++++|+ |. +++.|.+ .++. ..+...|.. .|+|. .||+|+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~-----~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~ 273 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PP-----VAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYL 273 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH-----HHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HH-----HHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEE
Confidence 4679999999999998888753 4788887 53 4444443 3543 334445544 57776 899999
Q ss_pred eccccccccccH-HHHHHHHHhccCCCcEEEEEcCC--C-------ch------------hHHHHHHHHHHhcceeEEEe
Q 044932 378 CDGCSITWHAHG-GKLLLEMNRILRPSGYFILSTKH--D-------SI------------EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 378 cs~cli~W~~d~-~~aL~EI~RVLRPGG~fVIsdp~--~-------~l------------e~~~~ie~La~~l~W~~v~~ 435 (689)
|..++++|.... ..+|.++.|+|+|||+|+|.+.. . .. ...+++..+++..+|+.+..
T Consensus 274 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 353 (369)
T 3gwz_A 274 IKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERS 353 (369)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEE
T ss_pred hhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEE
Confidence 987776654322 37999999999999999997631 1 00 01356888999999998765
Q ss_pred eccccCceeEEEEEe
Q 044932 436 KTDEISEMGVKIYQK 450 (689)
Q Consensus 436 ~~~~~g~~~i~IwqK 450 (689)
.....+...+..++|
T Consensus 354 ~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 354 LPCGAGPVRIVEIRR 368 (369)
T ss_dssp EECSSSSEEEEEEEE
T ss_pred EECCCCCcEEEEEEe
Confidence 442334444555554
No 114
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.12 E-value=1.4e-10 Score=115.75 Aligned_cols=99 Identities=19% Similarity=0.186 Sum_probs=69.4
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----------cCCC-cEEecCCCCC-CC--CCC
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----------RGFP-AVVSPLGNRR-LP--FPS 370 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----------RGL~-~i~~~~dt~~-LP--FpD 370 (689)
..+|||||||+|.++..|+.. .|+|+|+++. |++.|.+ .++. ..+...++.. || |++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~-----~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVK-----VSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHH-----HHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHH-----HHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC
Confidence 468999999999999888753 5899999864 4444432 2343 3344566655 77 889
Q ss_pred CCcceEEecccccccccc--------HHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 371 GVFDAIHCDGCSITWHAH--------GGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 371 ~SFDlVhcs~cli~W~~d--------~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
++||+|++... .+|... ...+|.++.|+|||||.|++.....
T Consensus 122 ~~~D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 122 GQLTKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp TCEEEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred cCeeEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 99999986532 244321 1369999999999999999987653
No 115
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.12 E-value=9.7e-10 Score=110.57 Aligned_cols=133 Identities=12% Similarity=0.064 Sum_probs=88.5
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEec
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
..+|||+|||+|.++..|+. ..|+++|+++. +++.|.+ .++. ..+...+... ++++++||+|+|.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~-----~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPD-----AVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSN 183 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHH-----HHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEEC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEEC
Confidence 46899999999999888773 36999998863 4454443 3554 3344444433 3556899999986
Q ss_pred cccccc------------c------------ccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEe
Q 044932 380 GCSITW------------H------------AHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 380 ~cli~W------------~------------~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~ 435 (689)
...+.. . .....++.++.++|+|||++++....... ..+..+++..+|..+..
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQG---EAVRQAFILAGYHDVET 260 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCH---HHHHHHHHHTTCTTCCE
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHH---HHHHHHHHHCCCcEEEE
Confidence 322111 0 12357889999999999999998765433 34777888889976544
Q ss_pred eccccCceeEEEEEe
Q 044932 436 KTDEISEMGVKIYQK 450 (689)
Q Consensus 436 ~~~~~g~~~i~IwqK 450 (689)
..+..+...+.+++|
T Consensus 261 ~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 261 CRDYGDNERVTLGRY 275 (276)
T ss_dssp EECTTSSEEEEEEEC
T ss_pred EecCCCCCcEEEEEE
Confidence 444445555666654
No 116
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.12 E-value=2.9e-10 Score=104.99 Aligned_cols=113 Identities=12% Similarity=0.140 Sum_probs=78.5
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCC--CcEEecCCCCCCCCCC-CCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGF--PAVVSPLGNRRLPFPS-GVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL--~~i~~~~dt~~LPFpD-~SFDlVhc 378 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++ ...+...+... ++++ ++||+|++
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~-----~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~ 106 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPE-----AISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVV 106 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHH-----HHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHH-----HHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEE
Confidence 3579999999999998888765 5899998763 4444443 354 22333344332 3343 58999998
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeE
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNI 432 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~ 432 (689)
.... + +...+|.++.|+|+|||++++..... .....+..+++..+|..
T Consensus 107 ~~~~-~---~~~~~l~~~~~~l~~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 107 GGSG-G---ELQEILRIIKDKLKPGGRIIVTAILL--ETKFEAMECLRDLGFDV 154 (192)
T ss_dssp SCCT-T---CHHHHHHHHHHTEEEEEEEEEEECBH--HHHHHHHHHHHHTTCCC
T ss_pred CCch-H---HHHHHHHHHHHhcCCCcEEEEEecCc--chHHHHHHHHHHCCCce
Confidence 7543 2 45789999999999999999987642 23345667778888843
No 117
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.12 E-value=3.6e-10 Score=115.49 Aligned_cols=135 Identities=13% Similarity=0.077 Sum_probs=91.6
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||+|||+|.++..++.. .++++|++ . +++.|.+ .++. ..+...+...+|++++ ||+|+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~ 237 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-S-----VLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVL 237 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-H-----HHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-H-----HHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEE
Confidence 4579999999999998887753 58888875 3 4444443 3543 3344556666678754 99999
Q ss_pred ecccccccc-ccHHHHHHHHHhccCCCcEEEEEcCCCc-------h-----------------hHHHHHHHHHHhcceeE
Q 044932 378 CDGCSITWH-AHGGKLLLEMNRILRPSGYFILSTKHDS-------I-----------------EEEEALTTLTASICWNI 432 (689)
Q Consensus 378 cs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~~~-------l-----------------e~~~~ie~La~~l~W~~ 432 (689)
|..++.+|. ++...+|.++.|+|+|||+++|.+.... . ...+.+..+++..+|+.
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~ 317 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSH 317 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSE
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCe
Confidence 987766653 2346899999999999999999864210 0 01356788889999987
Q ss_pred EEeeccccCceeEEEEEe
Q 044932 433 LAHKTDEISEMGVKIYQK 450 (689)
Q Consensus 433 v~~~~~~~g~~~i~IwqK 450 (689)
+..... .+...+.+.++
T Consensus 318 ~~~~~~-~~~~~~i~~~~ 334 (335)
T 2r3s_A 318 SQLHSL-PTTQQQVIVAY 334 (335)
T ss_dssp EEEECC-TTSSSEEEEEE
T ss_pred eeEEEC-CCCceeEEEec
Confidence 765332 22334455544
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.11 E-value=2.4e-10 Score=116.24 Aligned_cols=136 Identities=10% Similarity=0.066 Sum_probs=93.3
Q ss_pred CcccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc--C-CeEEEEcCCcccHHHHHHHHH----HcCC
Q 044932 282 QSEFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA--K-EVLTLTVGLKDDLVDLAQVAL----ERGF 354 (689)
Q Consensus 282 gt~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~--~-~V~gmDIsp~D~seamlq~A~----eRGL 354 (689)
...|..........+..++. ...+|||+|||+|.++..++. . .|+++|+++. +++.|. ..++
T Consensus 105 ~~~f~~~~~~~~~~l~~~~~------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~-----~~~~a~~n~~~n~~ 173 (278)
T 2frn_A 105 KIMFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPY-----TFKFLVENIHLNKV 173 (278)
T ss_dssp TSCCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHH-----HHHHHHHHHHHTTC
T ss_pred ceeEcCCcHHHHHHHHHhCC------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHH-----HHHHHHHHHHHcCC
Confidence 35566664444455555432 357899999999999988774 3 4999999874 444443 3466
Q ss_pred C--cEEecCCCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCC--c--hhHHHHHHHHHHhc
Q 044932 355 P--AVVSPLGNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD--S--IEEEEALTTLTASI 428 (689)
Q Consensus 355 ~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~--~--le~~~~ie~La~~l 428 (689)
. ..+...|...+++ +++||+|++... .....++.++.|+|||||+|++.+... . ......+...+...
T Consensus 174 ~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 174 EDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp TTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred CceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 5 3355667777766 689999987421 233578999999999999999976432 1 12234578888999
Q ss_pred ceeEEE
Q 044932 429 CWNILA 434 (689)
Q Consensus 429 ~W~~v~ 434 (689)
+|....
T Consensus 248 G~~~~~ 253 (278)
T 2frn_A 248 GYDVEK 253 (278)
T ss_dssp TCEEEE
T ss_pred CCeeEE
Confidence 998754
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.11 E-value=3.4e-10 Score=118.71 Aligned_cols=113 Identities=13% Similarity=0.047 Sum_probs=79.4
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCC--CcEEecCCCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGF--PAVVSPLGNR 364 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL--~~i~~~~dt~ 364 (689)
..|.+.|.+.+.. . ...+|||||||+|.++..++.. .|+++|+++ .. ..+.+.+...++ ...+...+..
T Consensus 50 ~~~~~~i~~~~~~-~---~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~-~~a~~~~~~~~~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 50 ESYRDFIYQNPHI-F---KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-IL-YQAMDIIRLNKLEDTITLIKGKIE 123 (340)
T ss_dssp HHHHHHHHHCGGG-T---TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HH-HHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhhhhh-c---CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HH-HHHHHHHHHcCCCCcEEEEEeeHH
Confidence 4566666665432 1 3568999999999998877754 599999985 32 233333444565 2345566777
Q ss_pred CCCCCCCCcceEEeccc--cccccccHHHHHHHHHhccCCCcEEEE
Q 044932 365 RLPFPSGVFDAIHCDGC--SITWHAHGGKLLLEMNRILRPSGYFIL 408 (689)
Q Consensus 365 ~LPFpD~SFDlVhcs~c--li~W~~d~~~aL~EI~RVLRPGG~fVI 408 (689)
.+++++++||+|+|... .+.+..+...+|.++.|+|||||+++.
T Consensus 124 ~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 124 EVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp TSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred HhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 88999899999998642 223344567899999999999999983
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.10 E-value=4.7e-10 Score=109.74 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=84.9
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcC---CCcEEecCCCCC----CCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERG---FPAVVSPLGNRR----LPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRG---L~~i~~~~dt~~----LPFpD~SFDlV 376 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++. -...+...+... ++++ .+||+|
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v 147 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAP-----RIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVI 147 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH-----HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH-----HHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEE
Confidence 3568999999999998877643 489999886 4555555431 122333455555 7777 899999
Q ss_pred EeccccccccccH---HHHHHHHHhccCCCcEEEEEcC----CCc----hhHHHHHHHHHHhcceeEEEeecc-cc-Cce
Q 044932 377 HCDGCSITWHAHG---GKLLLEMNRILRPSGYFILSTK----HDS----IEEEEALTTLTASICWNILAHKTD-EI-SEM 443 (689)
Q Consensus 377 hcs~cli~W~~d~---~~aL~EI~RVLRPGG~fVIsdp----~~~----le~~~~ie~La~~l~W~~v~~~~~-~~-g~~ 443 (689)
++. ..++ ..+|.++.|+|||||+|++... ... ....+.+. ++...+|+.+..... .. ...
T Consensus 148 ~~~------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~ 220 (230)
T 1fbn_A 148 YED------VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDH 220 (230)
T ss_dssp EEC------CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTE
T ss_pred EEe------cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccce
Confidence 832 1233 6789999999999999999521 111 01124466 677778887654332 11 124
Q ss_pred eEEEEEeC
Q 044932 444 GVKIYQKP 451 (689)
Q Consensus 444 ~i~IwqKp 451 (689)
++++++|+
T Consensus 221 ~~v~~~k~ 228 (230)
T 1fbn_A 221 VMFVGIWE 228 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 56777764
No 121
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.09 E-value=2.4e-10 Score=115.60 Aligned_cols=120 Identities=13% Similarity=0.093 Sum_probs=80.0
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc-----CCCcEEecCC-CCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER-----GFPAVVSPLG-NRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR-----GL~~i~~~~d-t~~LPFpD~SFDlV 376 (689)
++.+|||+|||+|.++..|++. .|+++|+++. |++.+.++ ++..+..... ....++.+.+||+|
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~-----~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPR-----VMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHH-----HHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHH-----HHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEE
Confidence 4679999999999999888742 3999999874 55555443 2222222221 24456788999999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCch-------hHHHHHHHHHHhcceeEEEe
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSI-------EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~l-------e~~~~ie~La~~l~W~~v~~ 435 (689)
++.. +++.+...+|.++.|+|||||+++|+...... .......+.++..+|+.+..
T Consensus 152 f~d~---~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~ 214 (233)
T 4df3_A 152 YADV---AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDV 214 (233)
T ss_dssp EECC---CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred EEec---cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEE
Confidence 8642 33456778999999999999999997532111 11122334456678887654
No 122
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=1.4e-09 Score=99.93 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=81.7
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++. ..+...+... ++++++||+|+|..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~ 108 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDG-----AIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGG 108 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHH-----HHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECS
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHH-----HHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECC
Confidence 3568999999999999888764 4899998863 4444444 3543 3344445444 67778999999876
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEe
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~ 435 (689)
+ .+...+|.++.|+ |||+|++..+.. .....+.++++..+|.....
T Consensus 109 ~-----~~~~~~l~~~~~~--~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 109 T-----KNIEKIIEILDKK--KINHIVANTIVL--ENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp C-----SCHHHHHHHHHHT--TCCEEEEEESCH--HHHHHHHHHHHHTTCEEEEE
T ss_pred c-----ccHHHHHHHHhhC--CCCEEEEEeccc--ccHHHHHHHHHHcCCeEEEE
Confidence 5 4667899999999 999999998652 22334677788888876543
No 123
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.08 E-value=2.4e-10 Score=106.14 Aligned_cols=143 Identities=15% Similarity=0.076 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEe
Q 044932 289 VLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVS 359 (689)
Q Consensus 289 a~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~ 359 (689)
...+.+.+...+..+. ...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++. ..+.
T Consensus 28 ~~~~~~~~~~~l~~~~---~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~ 99 (187)
T 2fhp_A 28 TDKVKESIFNMIGPYF---DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFA-----ALKVIKENIAITKEPEKFEVR 99 (187)
T ss_dssp CHHHHHHHHHHHCSCC---SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHHHHHHTCGGGEEEE
T ss_pred HHHHHHHHHHHHHhhc---CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHH-----HHHHHHHHHHHhCCCcceEEE
Confidence 3445555555543221 3468999999999998876643 5899999874 4444433 3542 3344
Q ss_pred cCCCCC----CCCCCCCcceEEeccccccccccHHHHHHHH--HhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEE
Q 044932 360 PLGNRR----LPFPSGVFDAIHCDGCSITWHAHGGKLLLEM--NRILRPSGYFILSTKHDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 360 ~~dt~~----LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI--~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v 433 (689)
..+... +++++++||+|++.... + ......++..+ .|+|+|||++++..+...... .. .-+|...
T Consensus 100 ~~d~~~~~~~~~~~~~~fD~i~~~~~~-~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~~~-----~~--~~~~~~~ 170 (187)
T 2fhp_A 100 KMDANRALEQFYEEKLQFDLVLLDPPY-A-KQEIVSQLEKMLERQLLTNEAVIVCETDKTVKLP-----ET--IGTLKKT 170 (187)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEEECCCG-G-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTCCCC-----SE--ETTEEEE
T ss_pred ECcHHHHHHHHHhcCCCCCEEEECCCC-C-chhHHHHHHHHHHhcccCCCCEEEEEeCCccccc-----cc--ccchhhh
Confidence 444332 23447899999986442 1 23456777777 999999999999876532210 01 1367665
Q ss_pred EeeccccCceeEEEEEe
Q 044932 434 AHKTDEISEMGVKIYQK 450 (689)
Q Consensus 434 ~~~~~~~g~~~i~IwqK 450 (689)
.... .+...+.+|++
T Consensus 171 ~~~~--~g~~~~~~~~~ 185 (187)
T 2fhp_A 171 RETV--YGITQVTIYRQ 185 (187)
T ss_dssp EEEE--ETTEEEEEEEC
T ss_pred hhhc--cCceEEEEEEe
Confidence 4332 34556777765
No 124
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.07 E-value=1.8e-10 Score=104.17 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=68.2
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCC--------CCCCCcc
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLP--------FPSGVFD 374 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LP--------FpD~SFD 374 (689)
...+|||+|||+|.++..++. ..|+++|+++ .... ....+...+...++ +++++||
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 356999999999998877753 3589999987 4311 12334455666666 7789999
Q ss_pred eEEeccccccccccH-----------HHHHHHHHhccCCCcEEEEEcCCC
Q 044932 375 AIHCDGCSITWHAHG-----------GKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 375 lVhcs~cli~W~~d~-----------~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
+|++.... +|..+. ..+|.++.|+|+|||++++.....
T Consensus 91 ~i~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 91 VVMSDMAP-NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred EEEECCCc-cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 99986432 333333 589999999999999999987653
No 125
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.07 E-value=4.6e-10 Score=111.93 Aligned_cols=118 Identities=8% Similarity=0.129 Sum_probs=81.9
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCC--CCCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLP--FPSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LP--FpD~SFDlVh 377 (689)
..+|||+|||+|.++..|+.+ .|+++|+++. +++.|.+ .++. ..+...|...++ +++++||+|+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~-----~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQER-----LADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHH-----HHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHH-----HHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 468999999999999888764 5899998864 4444443 3554 345555655554 6689999999
Q ss_pred eccccccc----c---------------ccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 378 CDGCSITW----H---------------AHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 378 cs~cli~W----~---------------~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
|....... . .+...+|.++.|+|||||+|++..++..... +..++...+|....
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLD---IIDIMRKYRLEPKR 197 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHH---HHHHHHHTTEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHH---HHHHHHHCCCceEE
Confidence 85221110 0 1235689999999999999999877654433 66677777887643
No 126
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.05 E-value=3.4e-09 Score=105.50 Aligned_cols=142 Identities=20% Similarity=0.129 Sum_probs=84.0
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCC-CCCC--CCCcc
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRR-LPFP--SGVFD 374 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~-LPFp--D~SFD 374 (689)
..+|||||||+|.++..|+.. .|+++|+++. +++.|++ .|+. ..+...++.. +|.. .++||
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAH-----HAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHH-----HHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 579999999999999888754 4899998864 4444444 3654 3344445433 3432 35999
Q ss_pred eEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCc---------hhHHHHH----HHHHHhcceeEEEeecc-cc
Q 044932 375 AIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDS---------IEEEEAL----TTLTASICWNILAHKTD-EI 440 (689)
Q Consensus 375 lVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~---------le~~~~i----e~La~~l~W~~v~~~~~-~~ 440 (689)
+|++.. +..+...+|.++.|+|||||+|++.+.... ......+ +.+...-.|.......- ..
T Consensus 139 ~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~ 214 (248)
T 3tfw_A 139 LIFIDA----DKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTK 214 (248)
T ss_dssp EEEECS----CGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTT
T ss_pred EEEECC----chHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCC
Confidence 999753 233556899999999999999999764311 0111223 33334445554432110 01
Q ss_pred CceeEEEEEeCCCchhHhh
Q 044932 441 SEMGVKIYQKPESNDIYEL 459 (689)
Q Consensus 441 g~~~i~IwqKp~~~~cy~~ 459 (689)
+.-++.+.++..+.+.|..
T Consensus 215 ~~DG~~i~~~~~~~~~~~~ 233 (248)
T 3tfw_A 215 GWDGFTLAWVNAAENLYFQ 233 (248)
T ss_dssp CSEEEEEEEECCC------
T ss_pred CCCeeEEEEEeCCcchHhH
Confidence 2356777777666555543
No 127
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.05 E-value=7.6e-10 Score=118.54 Aligned_cols=100 Identities=18% Similarity=0.110 Sum_probs=76.0
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++...+...|...+++++++||+|+|...
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~-----al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLA-----SVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPP 307 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHH-----HHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHH-----HHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc
Confidence 3568999999999999888765 5899998864 4444443 466666666777777777799999998643
Q ss_pred cccc-----cccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 382 SITW-----HAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 382 li~W-----~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
+ ++ ..+...+|.++.|+|||||+|+|...+.
T Consensus 308 ~-~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 308 F-HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp C-CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred h-hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2 32 2345689999999999999999987654
No 128
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.05 E-value=1e-09 Score=114.31 Aligned_cols=136 Identities=17% Similarity=0.269 Sum_probs=90.6
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||||||+|.++..|+.. .++++|+ + .+++.|.+ .++. ..+...+... ++|. .||+|+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~ 253 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-A-----GPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVL 253 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-H-----HHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEE
Confidence 4579999999999998887743 4788887 5 34555443 3543 3344445433 4554 499999
Q ss_pred ecccccccccc-HHHHHHHHHhccCCCcEEEEEcC--C--Cch--------------------hHHHHHHHHHHhcceeE
Q 044932 378 CDGCSITWHAH-GGKLLLEMNRILRPSGYFILSTK--H--DSI--------------------EEEEALTTLTASICWNI 432 (689)
Q Consensus 378 cs~cli~W~~d-~~~aL~EI~RVLRPGG~fVIsdp--~--~~l--------------------e~~~~ie~La~~l~W~~ 432 (689)
|..++.+|... ...+|.++.|+|+|||+|+|.+. . ... .....+..+++..+|+.
T Consensus 254 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~ 333 (374)
T 1qzz_A 254 LSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLAL 333 (374)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEE
T ss_pred EeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 98776665432 24899999999999999999776 2 110 02346788899999988
Q ss_pred EEeeccccCce-----eEEEEEeCC
Q 044932 433 LAHKTDEISEM-----GVKIYQKPE 452 (689)
Q Consensus 433 v~~~~~~~g~~-----~i~IwqKp~ 452 (689)
+..... .+.. .+..++|+.
T Consensus 334 ~~~~~~-~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 334 ASERTS-GSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEEEE-CCSSCSSCEEEEEEEECC
T ss_pred EEEEEC-CCCcccCCcEEEEEEECc
Confidence 654432 2233 577777754
No 129
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.05 E-value=9e-10 Score=128.42 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=75.5
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc----------CCC-cEEecCCCCCCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER----------GFP-AVVSPLGNRRLPFPSG 371 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR----------GL~-~i~~~~dt~~LPFpD~ 371 (689)
...+|||||||+|.++..|+.. .|+|+|+++ .|++.|+++ ++. ..+...+...+|++++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~-----emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~ 795 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISP-----KGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLH 795 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCH-----HHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCH-----HHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccC
Confidence 3578999999999999998864 489999886 466666551 333 3455677888999999
Q ss_pred CcceEEeccccccccccHH--HHHHHHHhccCCCcEEEEEcCC
Q 044932 372 VFDAIHCDGCSITWHAHGG--KLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 372 SFDlVhcs~cli~W~~d~~--~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+||+|+|..++.| ..++. .++.++.|+|||| +++|+++.
T Consensus 796 sFDlVV~~eVLeH-L~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 796 DVDIGTCLEVIEH-MEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp SCCEEEEESCGGG-SCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred CeeEEEEeCchhh-CChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999999765544 44443 5899999999999 88887653
No 130
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.05 E-value=5.5e-10 Score=118.60 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=81.3
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCC
Q 044932 289 VLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGN 363 (689)
Q Consensus 289 a~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt 363 (689)
...|.+.|...+.. . ...+|||||||+|.++..++.. .|+++|++ .+. ..+.+.+...++. ..+...+.
T Consensus 48 ~~~~~~~i~~~~~~-~---~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~-~~a~~~~~~~~~~~~v~~~~~d~ 121 (376)
T 3r0q_C 48 MDAYFNAVFQNKHH-F---EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMA-DHARALVKANNLDHIVEVIEGSV 121 (376)
T ss_dssp HHHHHHHHHTTTTT-T---TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTH-HHHHHHHHHTTCTTTEEEEESCG
T ss_pred HHHHHHHHHhcccc-C---CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHH-HHHHHHHHHcCCCCeEEEEECch
Confidence 34566666554332 1 3578999999999998887764 58999998 433 3334445556665 34556677
Q ss_pred CCCCCCCCCcceEEecc--ccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 364 RRLPFPSGVFDAIHCDG--CSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 364 ~~LPFpD~SFDlVhcs~--cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
..++++ ++||+|+|.. ..+.+......+|.+++|+|||||+|+++.
T Consensus 122 ~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 122 EDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp GGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 888888 8999999843 122222457789999999999999998764
No 131
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=6.8e-10 Score=108.69 Aligned_cols=114 Identities=12% Similarity=0.031 Sum_probs=81.8
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc-----CCC-cEEecCCCCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER-----GFP-AVVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR-----GL~-~i~~~~dt~~LPFpD~SFDlV 376 (689)
...+|||+|||+|.++..|+.. .|+++|+++. +++.|.++ |.. ..+...+...+|+++++||+|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~-----~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPH-----HLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHH-----HHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHH-----HHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEE
Confidence 3579999999999988777643 5899998763 45555443 533 334556666778888999999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
++.. .++..+|.++.|+|+|||++++..+.. .....+...++..+|..+.
T Consensus 171 ~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 171 ALDL------MEPWKVLEKAALALKPDRFLVAYLPNI--TQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEES------SCGGGGHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHTTTTEEEEE
T ss_pred EECC------cCHHHHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHHCCCceEE
Confidence 9731 245589999999999999999998763 2223355556667887643
No 132
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.04 E-value=1.6e-09 Score=109.17 Aligned_cols=138 Identities=13% Similarity=0.049 Sum_probs=81.0
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCC---CCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLP---FPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LP---FpD~SFDlVhcs 379 (689)
+..+|||+|||+|.++..|+.. .|+++|+++.+. ..+++.|.++. .......|+.... ....+||+|++.
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l-~~l~~~a~~r~-nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVV-RELLLVAQRRP-NIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHH-HHHHHHHHHCT-TEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHH-HHHHHHhhhcC-CeEEEEcccccchhhhccccceEEEEec
Confidence 4579999999999998777642 599999988532 23456666652 2333344543321 124689999986
Q ss_pred cccccccccHHHHH-HHHHhccCCCcEEEEEcCCCch-------hHHHHHHHHHHhcceeEEEeecc-ccC-ceeEEEEE
Q 044932 380 GCSITWHAHGGKLL-LEMNRILRPSGYFILSTKHDSI-------EEEEALTTLTASICWNILAHKTD-EIS-EMGVKIYQ 449 (689)
Q Consensus 380 ~cli~W~~d~~~aL-~EI~RVLRPGG~fVIsdp~~~l-------e~~~~ie~La~~l~W~~v~~~~~-~~g-~~~i~Iwq 449 (689)
... .+...+| ..+.|+|||||+|+++..+... +........++..+++.+...+. ... .-.+.+.+
T Consensus 154 ~a~----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 154 IAQ----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp CCC----TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEE
T ss_pred CCC----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEE
Confidence 432 2333444 4566699999999998543221 01122344555668887755432 111 12355565
Q ss_pred eC
Q 044932 450 KP 451 (689)
Q Consensus 450 Kp 451 (689)
|+
T Consensus 230 ~~ 231 (232)
T 3id6_C 230 YK 231 (232)
T ss_dssp EC
T ss_pred eC
Confidence 53
No 133
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.04 E-value=2.3e-10 Score=106.75 Aligned_cols=105 Identities=19% Similarity=0.163 Sum_probs=77.4
Q ss_pred CCCeEEEECCccchhHHHhhcCCeEEEEcCCcccHHHHHHHHHHcCC-CcEEecCCCCCCCC---CCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAKEVLTLTVGLKDDLVDLAQVALERGF-PAVVSPLGNRRLPF---PSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~~V~gmDIsp~D~seamlq~A~eRGL-~~i~~~~dt~~LPF---pD~SFDlVhcs~cli 383 (689)
.+.+|||+|||. |. + |.++.|++.|.++.. ...+...+...+|+ ++++||+|+|..++
T Consensus 12 ~g~~vL~~~~g~-----------v~-v-----D~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l- 73 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------SP-V-----EALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP- 73 (176)
T ss_dssp TTSEEEEEECTT-----------SC-H-----HHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST-
T ss_pred CCCEEEEecCCc-----------ee-e-----eCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh-
Confidence 467999999996 11 3 455689999888732 23445556677777 89999999987654
Q ss_pred ccc-ccHHHHHHHHHhccCCCcEEEEEcCC-------CchhHHHHHHHHHHhcce
Q 044932 384 TWH-AHGGKLLLEMNRILRPSGYFILSTKH-------DSIEEEEALTTLTASICW 430 (689)
Q Consensus 384 ~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~-------~~le~~~~ie~La~~l~W 430 (689)
+|. .+...+|.|++|+|||||+|++..+. .+......+..+++..+|
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 555 78899999999999999999997542 111123457788888899
No 134
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.04 E-value=8.6e-10 Score=114.79 Aligned_cols=115 Identities=13% Similarity=0.094 Sum_probs=79.5
Q ss_pred HHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCC
Q 044932 289 VLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGN 363 (689)
Q Consensus 289 a~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt 363 (689)
...|.+.|.+.+.. . ...+|||||||+|.++..++.. .|+++|+++ .. ..+.+.+...++. ..+...+.
T Consensus 23 ~~~y~~ai~~~~~~-~---~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~-~~a~~~~~~~~~~~~i~~~~~d~ 96 (328)
T 1g6q_1 23 TLSYRNAIIQNKDL-F---KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-II-EMAKELVELNGFSDKITLLRGKL 96 (328)
T ss_dssp HHHHHHHHHHHHHH-H---TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HH-HHHHHHHHHTTCTTTEEEEESCT
T ss_pred HHHHHHHHHhhHhh-c---CCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HH-HHHHHHHHHcCCCCCEEEEECch
Confidence 34666666554432 1 3468999999999988877754 599999984 22 2333344445654 34455667
Q ss_pred CCCCCCCCCcceEEeccc--cccccccHHHHHHHHHhccCCCcEEEEE
Q 044932 364 RRLPFPSGVFDAIHCDGC--SITWHAHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 364 ~~LPFpD~SFDlVhcs~c--li~W~~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
..+++++++||+|+|... .+........+|.++.|+|||||+++..
T Consensus 97 ~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 97 EDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp TTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred hhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 788888899999998632 2222345678999999999999999743
No 135
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.03 E-value=3.8e-10 Score=116.15 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=69.5
Q ss_pred CCeEEEECCccch----hHHHhhc--------CCeEEEEcCCcccHHHHHHHHHHcC--------C--------------
Q 044932 309 IRVVLEIGSADLS----FVASLLA--------KEVLTLTVGLKDDLVDLAQVALERG--------F-------------- 354 (689)
Q Consensus 309 ~R~VLDVGCGtGs----faa~La~--------~~V~gmDIsp~D~seamlq~A~eRG--------L-------------- 354 (689)
..+|||+|||||. ++..|++ ..|+|+|+++ .|++.|++.- +
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~-----~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~ 180 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT-----EVLEKARSGIYRLSELKTLSPQQLQRYFMRGTG 180 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH-----HHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCT
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH-----HHHHHHHhcCCchhhhhcCCHHHHHHHhhcccc
Confidence 4589999999997 4544442 2589999875 5777777631 1
Q ss_pred --------------CcEEecCCCCCCCCC-CCCcceEEeccccccccccH--HHHHHHHHhccCCCcEEEEEcCC
Q 044932 355 --------------PAVVSPLGNRRLPFP-SGVFDAIHCDGCSITWHAHG--GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 355 --------------~~i~~~~dt~~LPFp-D~SFDlVhcs~cli~W~~d~--~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
...+...+....||+ .+.||+|+|..+++++ .+. ..++.+++++|+|||+|++....
T Consensus 181 ~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 181 PHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp TSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred CCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 122334455555676 6899999997665543 333 68999999999999999996554
No 136
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.03 E-value=4.4e-10 Score=108.38 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=84.0
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCC---CcEEecCCCCCC-C-CCCCC-cce
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGF---PAVVSPLGNRRL-P-FPSGV-FDA 375 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL---~~i~~~~dt~~L-P-FpD~S-FDl 375 (689)
..+|||+|||+|.++..++.. .|+++|+++. |++.|.+ .++ ...+...|...+ + +++++ ||+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~-----~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKT-----VANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHH-----HHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHH-----HHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCE
Confidence 468999999999998875543 4899998864 4555443 355 234455554443 3 24678 999
Q ss_pred EEeccccccccccHHHHHHHH--HhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCCC
Q 044932 376 IHCDGCSITWHAHGGKLLLEM--NRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPES 453 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI--~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~ 453 (689)
|++... ++ ..+...++.++ .|+|+|||+|++...+..+.. + .-.|..+..+. .|...+.+|++...
T Consensus 129 I~~~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~~~~------~--~~~~~~~~~~~--yG~~~~~~~~~~~~ 196 (201)
T 2ift_A 129 VFLDPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKDKPLI------T--PENWTLLKEKT--TGIVSYRLYQNLEH 196 (201)
T ss_dssp EEECCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSSCCC------C--CTTEEEEEEEE--ETTEEEEEEEECC-
T ss_pred EEECCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCCCCcc------c--cchhHHHHHHh--cCCEEEEEEecchh
Confidence 998643 22 24556788888 789999999999876543111 1 13577665433 35667888887654
Q ss_pred c
Q 044932 454 N 454 (689)
Q Consensus 454 ~ 454 (689)
+
T Consensus 197 ~ 197 (201)
T 2ift_A 197 H 197 (201)
T ss_dssp -
T ss_pred c
Confidence 3
No 137
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.02 E-value=8.8e-10 Score=112.29 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=70.0
Q ss_pred CCCeEEEECCcc---chhHHHhh----cCCeEEEEcCCcccHHHHHHHHHHcC---CCcEEecCCCCCC-----------
Q 044932 308 NIRVVLEIGSAD---LSFVASLL----AKEVLTLTVGLKDDLVDLAQVALERG---FPAVVSPLGNRRL----------- 366 (689)
Q Consensus 308 ~~R~VLDVGCGt---Gsfaa~La----~~~V~gmDIsp~D~seamlq~A~eRG---L~~i~~~~dt~~L----------- 366 (689)
..++|||||||+ |.++..+. ...|+++|++| .|++.|+++- -...+...|...+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp-----~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDP-----MVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSH-----HHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECCh-----HHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhc
Confidence 357999999999 98765553 24699999886 4677766641 1233444444321
Q ss_pred CCCCCCcceEEecccccccccc--HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 367 PFPSGVFDAIHCDGCSITWHAH--GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 367 PFpD~SFDlVhcs~cli~W~~d--~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
.|+..+||+|++..++ ||..+ ...+|.++.|+|+|||+|+|++..
T Consensus 152 ~~d~~~~d~v~~~~vl-h~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGML-HYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HCCTTSCCEEEETTTG-GGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred cCCCCCCEEEEEechh-hhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 1333489999987554 55544 789999999999999999999754
No 138
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.02 E-value=2.4e-09 Score=111.11 Aligned_cols=140 Identities=19% Similarity=0.256 Sum_probs=89.7
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||||||+|.++..|+.. .++++|+ +... ....+.+...++. ..+...|... +++. .||+|++..+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~-~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTV-DTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHH-HHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHH-HHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 4579999999999998887743 4677777 6422 1122222234553 3344445433 4554 4999999877
Q ss_pred ccccccc-HHHHHHHHHhccCCCcEEEEEcCC--C-----ch----------------hHHHHHHHHHHhcceeEEEeec
Q 044932 382 SITWHAH-GGKLLLEMNRILRPSGYFILSTKH--D-----SI----------------EEEEALTTLTASICWNILAHKT 437 (689)
Q Consensus 382 li~W~~d-~~~aL~EI~RVLRPGG~fVIsdp~--~-----~l----------------e~~~~ie~La~~l~W~~v~~~~ 437 (689)
+.+|... ...+|.++.|+|+|||+|+|.+.. . .. ...+.+..+++..+|+.+....
T Consensus 259 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 259 LLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 6665432 258999999999999999998643 1 00 0124688899999998875543
Q ss_pred cccCc-----eeEEEEEeCC
Q 044932 438 DEISE-----MGVKIYQKPE 452 (689)
Q Consensus 438 ~~~g~-----~~i~IwqKp~ 452 (689)
.. +. ..+..++|+.
T Consensus 339 ~~-~~~~~~~~~~i~~~~~~ 357 (360)
T 1tw3_A 339 LP-SPTIPYDLSLLVLAPAA 357 (360)
T ss_dssp EE-CSSSSCEEEEEEEEEC-
T ss_pred CC-CCcccCccEEEEEEeCC
Confidence 21 22 4577777763
No 139
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.02 E-value=9.4e-10 Score=110.79 Aligned_cols=113 Identities=12% Similarity=0.089 Sum_probs=80.9
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc-----CCC-cEEecCCCCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER-----GFP-AVVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR-----GL~-~i~~~~dt~~LPFpD~SFDlV 376 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++ |+. ..+...+... ++++++||+|
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~V 183 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDE-----DNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAV 183 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCH-----HHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEE
Confidence 4579999999999988877643 589999876 355555443 443 3344555544 6788899999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
++. .+++..+|.++.|+|||||++++.++... ....+...+...+|..+.
T Consensus 184 i~~------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 184 IAD------IPDPWNHVQKIASMMKPGSVATFYLPNFD--QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp EEC------CSCGGGSHHHHHHTEEEEEEEEEEESSHH--HHHHHHHHSGGGTEEEEE
T ss_pred EEc------CcCHHHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCeEEE
Confidence 973 23556899999999999999999987632 223455666777887654
No 140
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.01 E-value=3.1e-10 Score=123.91 Aligned_cols=102 Identities=9% Similarity=-0.023 Sum_probs=71.3
Q ss_pred CCCeEEEECCccchhHHHhh---cCC-eEEEEcCCcccHH--HHHHH----HHHcCC---CcEEecCCCCCCCCCC--CC
Q 044932 308 NIRVVLEIGSADLSFVASLL---AKE-VLTLTVGLKDDLV--DLAQV----ALERGF---PAVVSPLGNRRLPFPS--GV 372 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La---~~~-V~gmDIsp~D~se--amlq~----A~eRGL---~~i~~~~dt~~LPFpD--~S 372 (689)
...+|||||||+|.++..++ ... |+|+|+++..... .+++. +...|+ ...+...|...+||++ .+
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~ 252 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIAN 252 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCC
Confidence 45789999999999877665 333 9999998742221 11111 122354 2345566777888864 48
Q ss_pred cceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 373 FDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 373 FDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
||+|++.. .+ |.++....|.|+.|+|||||+|++.+.
T Consensus 253 aDVVf~Nn-~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 253 TSVIFVNN-FA-FGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp CSEEEECC-TT-CCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred ccEEEEcc-cc-cCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 99999753 33 346778899999999999999999864
No 141
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.00 E-value=2.9e-09 Score=109.30 Aligned_cols=136 Identities=10% Similarity=-0.017 Sum_probs=88.7
Q ss_pred CeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCC--CcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 310 RVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGF--PAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL--~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
.+|||||||+|.++..++.. .++++|+ |.....+. +.+...++ ...+...+... |++ .+||+|+|..++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVAR-DNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHH-HHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHH-HHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 79999999999998887743 5899999 75442221 22222222 23344445444 666 6899999987776
Q ss_pred cccc-cHHHHHHHHHhccCCCcEEEEEcCC-----Cch-----------------hHHHHHHHHHHhcceeEEEeecccc
Q 044932 384 TWHA-HGGKLLLEMNRILRPSGYFILSTKH-----DSI-----------------EEEEALTTLTASICWNILAHKTDEI 440 (689)
Q Consensus 384 ~W~~-d~~~aL~EI~RVLRPGG~fVIsdp~-----~~l-----------------e~~~~ie~La~~l~W~~v~~~~~~~ 440 (689)
+|.. +...+|.++.|+|+|||+++|.+.. ... ....++..+++..+|+.+..... .
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~-~ 323 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL-P 323 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE-T
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEEC-C
Confidence 6643 2348999999999999999998632 000 01346788899999987654331 2
Q ss_pred CceeEEEEEe
Q 044932 441 SEMGVKIYQK 450 (689)
Q Consensus 441 g~~~i~IwqK 450 (689)
+...+...+|
T Consensus 324 ~~~~~i~~~~ 333 (334)
T 2ip2_A 324 METRMIVAAR 333 (334)
T ss_dssp TTEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 3344555554
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.00 E-value=1e-09 Score=107.98 Aligned_cols=112 Identities=15% Similarity=0.176 Sum_probs=79.2
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCCc--EEecCCCCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFPA--VVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~~--i~~~~dt~~LPFpD~SFDlV 376 (689)
...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .|+.. .+...|.. .++++++||+|
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~D~v 166 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIRED-----FAKLAWENIKWAGFDDRVTIKLKDIY-EGIEEENVDHV 166 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHH-----HHHHHHHHHHHHTCTTTEEEECSCGG-GCCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHH-----HHHHHHHHHHHcCCCCceEEEECchh-hccCCCCcCEE
Confidence 4578999999999998877643 4889998763 4455444 36653 34455544 34888999999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcc--eeEE
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASIC--WNIL 433 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~--W~~v 433 (689)
++.. .++..+|.++.|+|+|||++++..+.. .....+...++..+ |..+
T Consensus 167 ~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 167 ILDL------PQPERVVEHAAKALKPGGFFVAYTPCS--NQVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp EECS------SCGGGGHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHTGGGBSCC
T ss_pred EECC------CCHHHHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHcCCCcccc
Confidence 9742 245579999999999999999988753 22234556667777 7554
No 143
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.99 E-value=1.6e-09 Score=114.29 Aligned_cols=119 Identities=18% Similarity=0.192 Sum_probs=82.6
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
...+|||||||+|.++..|+.. .++++|+ | .+++.|.++ ....+...|... |+|++ |+|++..++.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-P-----HVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICH 272 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-H-----HHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhh
Confidence 4679999999999999888752 4677776 3 455555433 123344445444 77754 9999988776
Q ss_pred cccc-cHHHHHHHHHhccCCCcEEEEEcCC--C----ch---------------------hHHHHHHHHHHhcceeEEEe
Q 044932 384 TWHA-HGGKLLLEMNRILRPSGYFILSTKH--D----SI---------------------EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 384 ~W~~-d~~~aL~EI~RVLRPGG~fVIsdp~--~----~l---------------------e~~~~ie~La~~l~W~~v~~ 435 (689)
+|.. +...+|++++|+|||||+|+|.+.. . .. ....++..+++..+|+.+..
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 352 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKV 352 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEE
Confidence 6653 3357899999999999999997632 0 00 01245788899999988754
Q ss_pred e
Q 044932 436 K 436 (689)
Q Consensus 436 ~ 436 (689)
.
T Consensus 353 ~ 353 (368)
T 3reo_A 353 A 353 (368)
T ss_dssp E
T ss_pred E
Confidence 3
No 144
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.97 E-value=2.1e-09 Score=112.72 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=79.5
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNR 364 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~ 364 (689)
..|.+.|.+.+.. . ...+|||||||+|.++..++.. .|+++|+++ +. ..+.+.+...|+. ..+...+..
T Consensus 36 ~~y~~~i~~~l~~-~---~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~-~~a~~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 36 GTYQRAILQNHTD-F---KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHHHHTGGG-T---TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HH-HHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhcccc-C---CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HH-HHHHHHHHHcCCCCcEEEEEcchh
Confidence 4566666665542 1 3579999999999998877754 589999985 32 2333334444653 344556667
Q ss_pred CCCCCCCCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEEc
Q 044932 365 RLPFPSGVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 365 ~LPFpD~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
.++++ ++||+|++.....++. +.....|.++.|+|||||++++..
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp TCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 77777 6899999875555543 345678889999999999999654
No 145
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.97 E-value=1.1e-09 Score=105.63 Aligned_cols=128 Identities=10% Similarity=0.088 Sum_probs=83.9
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCC-CcEEecCCCCC-CCCCCCCcceEEec
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGF-PAVVSPLGNRR-LPFPSGVFDAIHCD 379 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL-~~i~~~~dt~~-LPFpD~SFDlVhcs 379 (689)
..+|||+|||+|.++..++.. .|+++|+++. |++.|++ .++ ...+...|... +++++++||+|++.
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~-----~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRA-----VSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVD 129 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHH-----HHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHH-----HHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEEC
Confidence 468999999999998875543 5899998864 4555443 355 33455555544 56777899999986
Q ss_pred cccccccccHHHHHHHHHh--ccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCC
Q 044932 380 GCSITWHAHGGKLLLEMNR--ILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPE 452 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~R--VLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~ 452 (689)
.. ++ ......++.++.+ +|+|||+|++......... . ..-.|..+..+. .+...+.+|++..
T Consensus 130 ~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~~~-----~--~~~~~~~~~~~~--~g~~~~~~~~~~~ 193 (202)
T 2fpo_A 130 PP-FR-RGLLEETINLLEDNGWLADEALIYVESEVENGLP-----T--VPANWSLHREKV--AGQVAYRLYQREA 193 (202)
T ss_dssp CS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGGCSC-----C--CCTTEEEEEEEE--ETTEEEEEEEECC
T ss_pred CC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEECCCcccc-----c--cCCcceEEeeec--cCCEEEEEEEECC
Confidence 43 22 2355678888865 6999999999876532110 0 113677654432 3566688888743
No 146
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.97 E-value=1.5e-09 Score=113.10 Aligned_cols=120 Identities=12% Similarity=0.099 Sum_probs=80.3
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHH--HcCCC--cEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVAL--ERGFP--AVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~--eRGL~--~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||||||+|.++..|+.. .++++|++ .++..+. ..++. ..+...|.. .++| +||+|++.
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~------~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~ 254 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA------EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLK 254 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH------HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCH------HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEe
Confidence 4679999999999999888752 35667762 2222110 11222 234444443 4566 89999998
Q ss_pred cccccccccH--HHHHHHHHhccCCCcEEEEEcCC------Cch----------------hHHHHHHHHHHhcceeEEEe
Q 044932 380 GCSITWHAHG--GKLLLEMNRILRPSGYFILSTKH------DSI----------------EEEEALTTLTASICWNILAH 435 (689)
Q Consensus 380 ~cli~W~~d~--~~aL~EI~RVLRPGG~fVIsdp~------~~l----------------e~~~~ie~La~~l~W~~v~~ 435 (689)
.++.+|. +. ..+|.++.|+|||||+|+|.+.. ... ...+++..+++..+|+.+..
T Consensus 255 ~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 255 RILHNWG-DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp SCGGGSC-HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhccCCC-HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 7776654 33 68999999999999999998631 000 02356888999999988765
Q ss_pred ec
Q 044932 436 KT 437 (689)
Q Consensus 436 ~~ 437 (689)
..
T Consensus 334 ~~ 335 (348)
T 3lst_A 334 VG 335 (348)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 147
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.96 E-value=2.9e-09 Score=103.12 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=78.5
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHc---CCCcEEecCCCCC----CCCCCCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALER---GFPAVVSPLGNRR----LPFPSGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eR---GL~~i~~~~dt~~----LPFpD~SFDl 375 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.+.++ .-...+...+... .+++ .+||+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~-----~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~ 146 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPR-----VLRELVPIVEERRNIVPILGDATKPEEYRALV-PKVDV 146 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHH-----HHHHHHHHHSSCTTEEEEECCTTCGGGGTTTC-CCEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHH-----HHHHHHHHHhccCCCEEEEccCCCcchhhccc-CCceE
Confidence 356899999999999887763 35899998863 34333322 1123333444443 2233 68999
Q ss_pred EEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCc--------hhHHHHHHHHHHhcceeEEEeeccc-c-CceeE
Q 044932 376 IHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDS--------IEEEEALTTLTASICWNILAHKTDE-I-SEMGV 445 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~--------le~~~~ie~La~~l~W~~v~~~~~~-~-g~~~i 445 (689)
|++... . ......+|.++.|+|||||+|++...... ......+..+ ... |+.+...... . ...++
T Consensus 147 v~~~~~-~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~ 221 (227)
T 1g8a_A 147 IFEDVA-Q--PTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYEKDHAL 221 (227)
T ss_dssp EEECCC-S--TTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEE
T ss_pred EEECCC-C--HhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEE
Confidence 997532 1 12223459999999999999999742211 0112456666 444 8776543321 1 12346
Q ss_pred EEEEe
Q 044932 446 KIYQK 450 (689)
Q Consensus 446 ~IwqK 450 (689)
++++|
T Consensus 222 ~~~~~ 226 (227)
T 1g8a_A 222 FVVRK 226 (227)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66665
No 148
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.96 E-value=1.7e-09 Score=107.72 Aligned_cols=94 Identities=20% Similarity=0.162 Sum_probs=70.7
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHc-----C--C-CcEEecCCCCCCCCCCCCcc
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALER-----G--F-PAVVSPLGNRRLPFPSGVFD 374 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eR-----G--L-~~i~~~~dt~~LPFpD~SFD 374 (689)
...+|||+|||+|.++.+|+. ..|+++|+++. +++.|.++ | . ...+...+...+++++++||
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D 173 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRAD-----HAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVD 173 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHH-----HHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHH-----HHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCcee
Confidence 356899999999999887764 24899998763 44444433 3 2 23455666677788889999
Q ss_pred eEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 375 AIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 375 lVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+|++.. .++..+|.++.|+|+|||++++..+.
T Consensus 174 ~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 174 RAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEES------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred EEEECC------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 999732 24558999999999999999999876
No 149
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.96 E-value=1.6e-09 Score=107.31 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=67.7
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------------CCCc-EEecCCCCC-CC--C
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------------GFPA-VVSPLGNRR-LP--F 368 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------------GL~~-i~~~~dt~~-LP--F 368 (689)
..+|||||||+|.++..|+.. .|+|+|+++. +++.|.++ ++.. .+...|... |+ |
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~-----~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQ-----VTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHH-----HHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTS
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHH-----HHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhc
Confidence 468999999999998887742 5999999864 44444321 5543 344555554 66 8
Q ss_pred CCCCcceEEecccccccccc--------HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 369 PSGVFDAIHCDGCSITWHAH--------GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 369 pD~SFDlVhcs~cli~W~~d--------~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
++++||.|+..... +|... ...+|.++.|+|+|||+|++.+..
T Consensus 125 ~~~~~d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 125 EKGQLSKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp CTTCEEEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccCEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 88999999754211 22111 047999999999999999997654
No 150
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.95 E-value=9.8e-10 Score=106.28 Aligned_cols=94 Identities=16% Similarity=0.056 Sum_probs=67.0
Q ss_pred CCCeEEEECCccchhHHHhhc--CCeEEEEcCCcccHHHHHHHHHHcCC---CcEEecCCCCCCCCCCCCcceEEecccc
Q 044932 308 NIRVVLEIGSADLSFVASLLA--KEVLTLTVGLKDDLVDLAQVALERGF---PAVVSPLGNRRLPFPSGVFDAIHCDGCS 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~--~~V~gmDIsp~D~seamlq~A~eRGL---~~i~~~~dt~~LPFpD~SFDlVhcs~cl 382 (689)
...+|||+|||+|.++..|+. ..|+++|+++ .+++.|.++.. ...+...+......++++||+|++..++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINE-----KMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATA 144 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCH-----HHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCH-----HHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcH
Confidence 356899999999999888875 3589999875 46666666511 3334444544422346899999987654
Q ss_pred ccccccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 383 ITWHAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 383 i~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
.+ . ..++.|+|||||++++..+..
T Consensus 145 ~~-~------~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 145 PT-L------LCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SS-C------CHHHHHTEEEEEEEEEEECSS
T ss_pred HH-H------HHHHHHHcCCCcEEEEEEcCC
Confidence 33 2 248999999999999997753
No 151
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.95 E-value=1e-09 Score=104.69 Aligned_cols=93 Identities=19% Similarity=0.090 Sum_probs=68.2
Q ss_pred CCCeEEEECCccchhHHHhhc--CCeEEEEcCCcccHHHHHHHHHHc----CCC-cEEecCCCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLA--KEVLTLTVGLKDDLVDLAQVALER----GFP-AVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~--~~V~gmDIsp~D~seamlq~A~eR----GL~-~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
...+|||+|||+|.++..|+. ..|+++|+++ .+++.|.++ ++. ..+...+....++++++||+|++..
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIK-----GLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTA 151 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCH-----HHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCH-----HHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEcc
Confidence 457899999999999888775 3589999886 355555443 554 3344556556666678999999875
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+. ++.. .++.++|||||+|++..+.
T Consensus 152 ~~-~~~~------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 152 AP-PEIP------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp BC-SSCC------THHHHTEEEEEEEEEEECS
T ss_pred ch-hhhh------HHHHHhcccCcEEEEEEcC
Confidence 44 3232 2789999999999999876
No 152
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.94 E-value=2.8e-09 Score=105.24 Aligned_cols=151 Identities=11% Similarity=0.060 Sum_probs=90.9
Q ss_pred hHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHH----HcCCC---
Q 044932 288 GVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVAL----ERGFP--- 355 (689)
Q Consensus 288 ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~----eRGL~--- 355 (689)
....++..|....+ .....+|||||||+|.++..|+. ..|+++|+++. +++.|+ ..|+.
T Consensus 40 ~~~~~l~~l~~~~~----~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~g~~~~~ 110 (221)
T 3dr5_A 40 MTGQLLTTLAATTN----GNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESE-----HQRQAKALFREAGYSPSR 110 (221)
T ss_dssp HHHHHHHHHHHHSC----CTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHH-----HHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHhhC----CCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCcCc
Confidence 33455555554432 11234899999999998887764 24899998874 444443 34665
Q ss_pred cEEecCCCCC-CC-CCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCC--------ch-hHHHHHHHH
Q 044932 356 AVVSPLGNRR-LP-FPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD--------SI-EEEEALTTL 424 (689)
Q Consensus 356 ~i~~~~dt~~-LP-FpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~--------~l-e~~~~ie~L 424 (689)
..+...++.. ++ +++++||+|++... ..+...+|.++.|+|||||+|++.+... .. .....+.++
T Consensus 111 i~~~~gda~~~l~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~ 186 (221)
T 3dr5_A 111 VRFLLSRPLDVMSRLANDSYQLVFGQVS----PMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDA 186 (221)
T ss_dssp EEEECSCHHHHGGGSCTTCEEEEEECCC----TTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHH
T ss_pred EEEEEcCHHHHHHHhcCCCcCeEEEcCc----HHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHH
Confidence 3344444322 32 44789999987532 2345579999999999999999965320 01 111234444
Q ss_pred HHhccee----EEEeeccccCceeEEEEEeCCCch
Q 044932 425 TASICWN----ILAHKTDEISEMGVKIYQKPESND 455 (689)
Q Consensus 425 a~~l~W~----~v~~~~~~~g~~~i~IwqKp~~~~ 455 (689)
.+.+... .+.. . -+.|+.+.+|++.+.
T Consensus 187 ~~~l~~~~~~~~~~l---p-~gdGl~~~~~~~~~~ 217 (221)
T 3dr5_A 187 DEYIRSIEGAHVARL---P-LGAGLTVVTKALEHH 217 (221)
T ss_dssp HHHHTTCTTEEEEEE---S-STTCEEEEEECCCCC
T ss_pred HHHHhhCCCeeEEEe---e-ccchHHHHHHHHHhh
Confidence 4444432 2211 1 134689999988754
No 153
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.94 E-value=5.6e-10 Score=121.47 Aligned_cols=93 Identities=19% Similarity=0.189 Sum_probs=69.9
Q ss_pred CCCeEEEECCc------cchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCC------C
Q 044932 308 NIRVVLEIGSA------DLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFP------S 370 (689)
Q Consensus 308 ~~R~VLDVGCG------tGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFp------D 370 (689)
...+||||||| +|..+..++. ..|+++|+++.+. ...-...+...|...+||. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 35799999999 6665555442 3699999998631 1222344566777888887 7
Q ss_pred CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 371 GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 371 ~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++||+|+|..+ |+..+...+|.|+.|+|||||+|++.+.
T Consensus 287 ~sFDlVisdgs--H~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 287 GPFDIVIDDGS--HINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CCEEEEEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CCccEEEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999998643 3446778999999999999999999864
No 154
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.94 E-value=4.3e-09 Score=110.02 Aligned_cols=122 Identities=16% Similarity=0.012 Sum_probs=82.7
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCC-cEEecCCCCCCCCCCCCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFP-AVVSPLGNRRLPFPSGVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~-~i~~~~dt~~LPFpD~SFDlVhcs~c 381 (689)
...+|||+|||+|.++..++. ..|+|+|+++... ..+.+.+...|+. ..+...|...+|++..+||+|+|..-
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i-~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRL-GLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHH-HHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHH-HHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 457899999999998766553 5699999987422 1222223334654 45566777888888788999998421
Q ss_pred c-------ccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEee
Q 044932 382 S-------ITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 382 l-------i~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~ 436 (689)
. .++......++.++.|+|||||.+++.++... .+..+.+ .+|+.....
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~-----~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPA-----LLKRALP-PGFALRHAR 337 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHH-----HHHHHCC-TTEEEEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHH-----HHHHHhh-cCcEEEEEE
Confidence 1 01111125789999999999999999988632 2445666 888876543
No 155
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.94 E-value=6.1e-11 Score=115.70 Aligned_cols=95 Identities=11% Similarity=-0.008 Sum_probs=68.8
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHH----HcCC--CcEEecCCCCCCCCCCCCcceEEecc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVAL----ERGF--PAVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~----eRGL--~~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
..+|||+|||+|.++..|+.. .|+++|+++. +++.|. ..++ ...+...|...++ ++++||+|++..
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~ 152 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPV-----KIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSP 152 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECC
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHH-----HHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECC
Confidence 468999999999999888865 5899999874 444443 3465 2345555655555 568999999864
Q ss_pred ccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 381 CSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 381 cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
.. ++..+....+.++.|+|+|||++++..
T Consensus 153 ~~-~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 153 PW-GGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CC-SSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred Cc-CCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 33 334445557889999999999987764
No 156
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.94 E-value=3.3e-09 Score=110.46 Aligned_cols=117 Identities=9% Similarity=0.102 Sum_probs=80.9
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
...+|||||||+|.++..|+.. .++++|+ | .+++.|.+.. ...+...|... ++|+ ||+|++..++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh 257 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P-----QVVENLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILH 257 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H-----HHHhhcccCC-CcEEEeccccC-CCCC--ccEEEeehhhc
Confidence 3579999999999999888743 4888887 5 4565554321 13344445433 6663 99999987776
Q ss_pred cccccHH--HHHHHHHhccCC---CcEEEEEcCC----C-c---h-----------------hHHHHHHHHHHhcceeEE
Q 044932 384 TWHAHGG--KLLLEMNRILRP---SGYFILSTKH----D-S---I-----------------EEEEALTTLTASICWNIL 433 (689)
Q Consensus 384 ~W~~d~~--~aL~EI~RVLRP---GG~fVIsdp~----~-~---l-----------------e~~~~ie~La~~l~W~~v 433 (689)
+|. +.. .+|+++.|+||| ||+|+|.+.. . . . ....++..+++..+|+.+
T Consensus 258 ~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 336 (352)
T 1fp2_A 258 NWT-DKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHY 336 (352)
T ss_dssp GSC-HHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEE
T ss_pred cCC-HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCee
Confidence 653 444 899999999999 9999998631 1 0 0 012457778888888766
Q ss_pred Ee
Q 044932 434 AH 435 (689)
Q Consensus 434 ~~ 435 (689)
..
T Consensus 337 ~~ 338 (352)
T 1fp2_A 337 KI 338 (352)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 157
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.92 E-value=2.5e-09 Score=101.12 Aligned_cols=92 Identities=13% Similarity=0.157 Sum_probs=63.6
Q ss_pred CCeEEEECCccchhHHHhhc------CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCC---------------
Q 044932 309 IRVVLEIGSADLSFVASLLA------KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLP--------------- 367 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~------~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LP--------------- 367 (689)
..+|||+|||+|.++.+|+. ..|+++|+++... ..+ ..+...+...++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~---------~~~--v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP---------IPN--VYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC---------CTT--CEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC---------CCC--ceEEEccccchhhhhhccccccccccc
Confidence 46899999999999887764 2489999998310 012 223344555555
Q ss_pred ----------CCCCCcceEEecccccccc----ccH-------HHHHHHHHhccCCCcEEEEEcCC
Q 044932 368 ----------FPSGVFDAIHCDGCSITWH----AHG-------GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 368 ----------FpD~SFDlVhcs~cli~W~----~d~-------~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|++++||+|+|... .+|. .+. ..+|.++.|+|||||.|++....
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 67789999998643 2332 122 23789999999999999997643
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.92 E-value=7.7e-10 Score=110.08 Aligned_cols=115 Identities=13% Similarity=0.107 Sum_probs=75.9
Q ss_pred CCeEEEECCccchhHHHhhc--------CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCC---CCCCC-CCcceE
Q 044932 309 IRVVLEIGSADLSFVASLLA--------KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRR---LPFPS-GVFDAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~--------~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~---LPFpD-~SFDlV 376 (689)
..+|||||||+|.+++.|+. ..|+++|+++... +.|....-...+...+... +++.+ .+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l-----~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC-----QIPASDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC-----CCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH-----HHHhccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 36899999999998877654 3599999998633 3333222223344455555 36544 479999
Q ss_pred EeccccccccccHHHHHHHHHh-ccCCCcEEEEEcCCCch--hHHHHHHHHHHhc--ceeE
Q 044932 377 HCDGCSITWHAHGGKLLLEMNR-ILRPSGYFILSTKHDSI--EEEEALTTLTASI--CWNI 432 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~R-VLRPGG~fVIsdp~~~l--e~~~~ie~La~~l--~W~~ 432 (689)
++... +.+...+|.++.| +|||||+|++.+..... .....+.++++.. +|..
T Consensus 157 ~~d~~----~~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 157 FIDNA----HANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp EEESS----CSSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred EECCc----hHhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 97543 2366789999998 99999999998642111 1123566666665 4554
No 159
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.92 E-value=7.3e-09 Score=100.50 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=64.9
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCC-CCC-----CCC
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRR-LPF-----PSG 371 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~-LPF-----pD~ 371 (689)
..+|||||||+|.++.+|+.. .|+++|+++. +++.|.+ .++. ..+...++.. +|. ..+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPD-----CAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-----HHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChH-----HHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCC
Confidence 578999999999999888752 4899998864 4455444 3554 3334444322 332 237
Q ss_pred CcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 372 VFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 372 SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+||+|++.....+ ..+...++.++ |+|||||+|++.+..
T Consensus 134 ~fD~V~~d~~~~~-~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 134 TLDMVFLDHWKDR-YLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCSEEEECSCGGG-HHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred ceEEEEEcCCccc-chHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9999998643322 23334566677 999999999998653
No 160
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.92 E-value=4.6e-10 Score=102.53 Aligned_cols=97 Identities=15% Similarity=0.121 Sum_probs=66.1
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCC-CC-CC--CCCcceEEe
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRR-LP-FP--SGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~-LP-Fp--D~SFDlVhc 378 (689)
..+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++...+...+... ++ ++ +.+||+|++
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPE-----AVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTCEEEEECCCHH-----HHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHH-----HHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 468999999999998888754 4889998763 4444443 34444454455433 22 11 348999998
Q ss_pred ccccccccccHHHHHHHHH--hccCCCcEEEEEcCCC
Q 044932 379 DGCSITWHAHGGKLLLEMN--RILRPSGYFILSTKHD 413 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~--RVLRPGG~fVIsdp~~ 413 (689)
..... .+...++..+. |+|+|||++++..+..
T Consensus 117 ~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 117 APPYA---MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 64321 33446777777 9999999999988753
No 161
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.91 E-value=2e-09 Score=117.64 Aligned_cols=102 Identities=9% Similarity=-0.076 Sum_probs=69.2
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHH--HHHHHHHH----cCC--Cc-EEecCCCCCC--CC--CC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLV--DLAQVALE----RGF--PA-VVSPLGNRRL--PF--PS 370 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~se--amlq~A~e----RGL--~~-i~~~~dt~~L--PF--pD 370 (689)
...+|||||||+|.++..|+.. .|+|+|+++..... .|++.+.+ .|+ .. .+...+.... +| ..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 4579999999999998877652 49999998753322 24444344 352 22 2333333222 23 25
Q ss_pred CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 371 GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 371 ~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++||+|+++..+ +..+...+|.++.|+|||||.|++.++
T Consensus 322 ~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 322 PQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp GGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 799999986433 345677889999999999999999864
No 162
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.91 E-value=6e-10 Score=103.51 Aligned_cols=98 Identities=9% Similarity=0.079 Sum_probs=67.3
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCC-CCCCCCCcceEEe
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRR-LPFPSGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~-LPFpD~SFDlVhc 378 (689)
..+|||+|||+|.++..++.. .|+++|+++ .+++.|.+ .++. ..+...+... ++..+++||+|++
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNR-----KAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCH-----HHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEE
Confidence 468999999999998887754 489999876 45555544 3443 3344445433 4444578999998
Q ss_pred ccccccccccHHHHHHHHH--hccCCCcEEEEEcCCC
Q 044932 379 DGCSITWHAHGGKLLLEMN--RILRPSGYFILSTKHD 413 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~--RVLRPGG~fVIsdp~~ 413 (689)
.... + ......++..+. |+|+|||+|++.....
T Consensus 107 ~~~~-~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 107 DPPY-A-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp CCSS-H-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCC-C-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 6432 1 123456777776 9999999999987653
No 163
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.91 E-value=7.3e-10 Score=113.89 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=66.0
Q ss_pred CCCeEEEECCccchhHHHhhcC-CeEEEEcCCcccHHHHHHHHHHcCC-------CcEEe--cCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-EVLTLTVGLKDDLVDLAQVALERGF-------PAVVS--PLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-~V~gmDIsp~D~seamlq~A~eRGL-------~~i~~--~~dt~~LPFpD~SFDlVh 377 (689)
+..+|||+|||+|.|+.+++.. .|+++|+++ +. ..|.++.+ ...+. ..|...|| +++||+|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~-----~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LG-----TSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CC-----CTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hh-----hhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 3578999999999999888774 699999998 32 11222221 23344 55666665 68999999
Q ss_pred eccccc--cccccHH---HHHHHHHhccCCCc--EEEEEcCC
Q 044932 378 CDGCSI--TWHAHGG---KLLLEMNRILRPSG--YFILSTKH 412 (689)
Q Consensus 378 cs~cli--~W~~d~~---~aL~EI~RVLRPGG--~fVIsdp~ 412 (689)
|....+ +|..+.. .+|.++.|+||||| .|++....
T Consensus 154 sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 864311 1111111 37999999999999 99987543
No 164
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.91 E-value=3.2e-09 Score=109.64 Aligned_cols=120 Identities=15% Similarity=0.142 Sum_probs=79.7
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcC---------CCcEEecCCCCCCCC--CCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERG---------FPAVVSPLGNRRLPF--PSGV 372 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRG---------L~~i~~~~dt~~LPF--pD~S 372 (689)
...+|||||||+|.++..++.. .|+++|+++ .+++.|+++- ....+...|...+++ ++++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDG-----EVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCH-----HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTC
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCH-----HHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCc
Confidence 4579999999999999888754 488999886 4566665532 123344445444433 4789
Q ss_pred cceEEeccccccccccH----HHHHHHHHhccCCCcEEEEEcCCCch--hHHHHHHHHHHhcceeEE
Q 044932 373 FDAIHCDGCSITWHAHG----GKLLLEMNRILRPSGYFILSTKHDSI--EEEEALTTLTASICWNIL 433 (689)
Q Consensus 373 FDlVhcs~cli~W~~d~----~~aL~EI~RVLRPGG~fVIsdp~~~l--e~~~~ie~La~~l~W~~v 433 (689)
||+|++.... ++.... ..+|.++.|+|||||+|++....... .....+.+.++..+|..+
T Consensus 170 fDvIi~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 170 YDVVIIDTTD-PAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASV 235 (304)
T ss_dssp EEEEEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEE
T ss_pred eeEEEECCCC-ccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcE
Confidence 9999985322 322111 57899999999999999998654322 233456667777778654
No 165
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.90 E-value=1.8e-09 Score=101.47 Aligned_cols=94 Identities=22% Similarity=0.133 Sum_probs=63.1
Q ss_pred CCCeEEEECCccchhHHHhhc-------------CCeEEEEcCCcccHHHHHHHHHHcCCCcEEe-cCCCCCCC------
Q 044932 308 NIRVVLEIGSADLSFVASLLA-------------KEVLTLTVGLKDDLVDLAQVALERGFPAVVS-PLGNRRLP------ 367 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-------------~~V~gmDIsp~D~seamlq~A~eRGL~~i~~-~~dt~~LP------ 367 (689)
...+|||+|||+|.++..|+. ..|+++|+++... + .+ ..+. ..+...++
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~----~-----~~--~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP----L-----EG--ATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC----C-----TT--CEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc----C-----CC--CeEEEeccCCCHHHHHHHH
Confidence 357899999999998887764 3489999987310 0 11 2233 33333222
Q ss_pred --CCCCCcceEEeccc---cccccccH-------HHHHHHHHhccCCCcEEEEEcCC
Q 044932 368 --FPSGVFDAIHCDGC---SITWHAHG-------GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 368 --FpD~SFDlVhcs~c---li~W~~d~-------~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+++++||+|+|..+ ..+|..+. ..+|.++.|+|||||.|++....
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 45679999998542 12232233 47899999999999999998654
No 166
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.90 E-value=1.2e-09 Score=105.47 Aligned_cols=93 Identities=17% Similarity=0.157 Sum_probs=66.1
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHc----CC------CcEEecCCCCCCCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALER----GF------PAVVSPLGNRRLPFPSGV 372 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eR----GL------~~i~~~~dt~~LPFpD~S 372 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.|.++ ++ ...+...+....++++++
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 151 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKE-----LVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAP 151 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHH-----HHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHH-----HHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCC
Confidence 356899999999998877763 35999998864 44444332 22 233445555555556789
Q ss_pred cceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 373 FDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 373 FDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
||+|++..... .++.++.|+|||||+|++...+
T Consensus 152 fD~i~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 152 YDAIHVGAAAP-------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEEECSBBS-------SCCHHHHHTEEEEEEEEEEESC
T ss_pred cCEEEECCchH-------HHHHHHHHhcCCCcEEEEEEec
Confidence 99999875432 3457899999999999998765
No 167
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.90 E-value=8.2e-10 Score=112.76 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=65.8
Q ss_pred CCCeEEEECCccchhHHHhhcC-CeEEEEcCCcccHHHHHHHHHHcCC-------CcEEe--cCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-EVLTLTVGLKDDLVDLAQVALERGF-------PAVVS--PLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-~V~gmDIsp~D~seamlq~A~eRGL-------~~i~~--~~dt~~LPFpD~SFDlVh 377 (689)
...+|||+|||+|.|+.+++.. .|+++|+++ +. ..+.++.+ ...+. ..|...|| +++||+|+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~-----~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LG-----VGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CC-----CSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hh-----hhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 3578999999999999888774 699999998 32 11111111 23344 55666655 78999999
Q ss_pred eccccc--cccccHH---HHHHHHHhccCCCc--EEEEEcCC
Q 044932 378 CDGCSI--TWHAHGG---KLLLEMNRILRPSG--YFILSTKH 412 (689)
Q Consensus 378 cs~cli--~W~~d~~---~aL~EI~RVLRPGG--~fVIsdp~ 412 (689)
|....+ +|..+.. .+|.++.|+||||| .|++....
T Consensus 146 sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 146 CDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 864311 1111111 38999999999999 99997644
No 168
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.89 E-value=5.1e-09 Score=110.00 Aligned_cols=92 Identities=14% Similarity=0.216 Sum_probs=66.5
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
...+|||||||+|.++..|+.. .++++|+ | .+++.|.+.. ...+...|... |+|+ ||+|++..++.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~-----~~~~~a~~~~-~v~~~~~d~~~-~~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-P-----QVIENAPPLS-GIEHVGGDMFA-SVPQ--GDAMILKAVCH 278 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCCT-TEEEEECCTTT-CCCC--EEEEEEESSGG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-H-----HHHHhhhhcC-CCEEEeCCccc-CCCC--CCEEEEecccc
Confidence 4579999999999999888753 3566676 4 4565554321 13344445544 6774 99999987765
Q ss_pred cccccHH--HHHHHHHhccCCCcEEEEEc
Q 044932 384 TWHAHGG--KLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 384 ~W~~d~~--~aL~EI~RVLRPGG~fVIsd 410 (689)
+| .++. .+|.++.|+|||||+|+|.+
T Consensus 279 ~~-~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 279 NW-SDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC-CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 4455 89999999999999999985
No 169
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.89 E-value=7.1e-09 Score=105.35 Aligned_cols=121 Identities=13% Similarity=0.064 Sum_probs=75.4
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEc-CCcccHHHHHHHHHHc---------CCC------cEEecCCC----CC
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTV-GLKDDLVDLAQVALER---------GFP------AVVSPLGN----RR 365 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDI-sp~D~seamlq~A~eR---------GL~------~i~~~~dt----~~ 365 (689)
..+|||+|||+|.++..++.. .|+++|+ ++. +++.|.++ ++. ..+..++. ..
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~-----~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPE-----ILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHH-----HHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHH-----HHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 468999999999988777653 5899999 663 34443322 221 22221211 11
Q ss_pred CC--CCCCCcceEEeccccccccccHHHHHHHHHhccC---C--CcEEEEEcCCCc---hhHHHHHHHHHHhcc-eeEEE
Q 044932 366 LP--FPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILR---P--SGYFILSTKHDS---IEEEEALTTLTASIC-WNILA 434 (689)
Q Consensus 366 LP--FpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLR---P--GG~fVIsdp~~~---le~~~~ie~La~~l~-W~~v~ 434 (689)
++ +++++||+|+++.++.+ ..+...+|.++.|+|+ | ||.+++...+.. ......+...++..+ |....
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl~~-~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLLSF-HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp HHHHHSCSSBSEEEEESCCSC-GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEE
T ss_pred HHhhccCCCCCEEEEeCcccC-hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEE
Confidence 11 04689999998766543 5677899999999999 9 998777543321 111123555677778 87654
Q ss_pred e
Q 044932 435 H 435 (689)
Q Consensus 435 ~ 435 (689)
.
T Consensus 234 ~ 234 (281)
T 3bzb_A 234 W 234 (281)
T ss_dssp E
T ss_pred e
Confidence 3
No 170
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.88 E-value=4e-09 Score=103.68 Aligned_cols=93 Identities=20% Similarity=0.216 Sum_probs=67.4
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCC-CC-CCCCCcceE
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRR-LP-FPSGVFDAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~-LP-FpD~SFDlV 376 (689)
..+|||+|||+|.++..|+. ..|+++|+++. +++.|.+ .++. ..+...+... +| +.+++||+|
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNET-----MIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHH-----HHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEE
Confidence 57899999999999988876 24899999874 4444443 4553 3344455433 44 447899999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
++.. +..+...+|.++.|+|||||+|++..
T Consensus 147 ~~~~----~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 147 FIDA----AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEET----TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEcC----cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 9753 23355689999999999999999954
No 171
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.87 E-value=3e-08 Score=104.19 Aligned_cols=139 Identities=10% Similarity=0.102 Sum_probs=94.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----CCC-cEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----GFP-AVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----GL~-~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
..++|||||||+|.++..|+.+ .+++.|+ +.+++.|.++ +.. ..+...|....|++ .+|++++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl------p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~ 250 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI------PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYIL 250 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC------HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC------HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEe
Confidence 4679999999999999888764 2455554 3466666654 111 22334444444555 5799999
Q ss_pred cccccccccc-HHHHHHHHHhccCCCcEEEEEcCC-------Cch----------------hHHHHHHHHHHhcceeEEE
Q 044932 379 DGCSITWHAH-GGKLLLEMNRILRPSGYFILSTKH-------DSI----------------EEEEALTTLTASICWNILA 434 (689)
Q Consensus 379 s~cli~W~~d-~~~aL~EI~RVLRPGG~fVIsdp~-------~~l----------------e~~~~ie~La~~l~W~~v~ 434 (689)
..++.+|.++ -..+|++++++|+|||.++|.+.. ... ....++..+++..||+.+.
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 8888777543 357899999999999999998632 000 0134688999999999876
Q ss_pred eeccccCceeEEEEEeCCCch
Q 044932 435 HKTDEISEMGVKIYQKPESND 455 (689)
Q Consensus 435 ~~~~~~g~~~i~IwqKp~~~~ 455 (689)
... +.+...+.+.+|...+.
T Consensus 331 v~~-~~~~~~~i~ArKgt~~~ 350 (353)
T 4a6d_A 331 FKK-TGAIYDAILARKGTHHH 350 (353)
T ss_dssp EEC-CSSSCEEEEEECCCC--
T ss_pred EEE-cCCceEEEEEEecCccc
Confidence 533 34556688999976643
No 172
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.86 E-value=6.8e-09 Score=104.26 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=78.2
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHc----CC--CcEEecCCCCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALER----GF--PAVVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eR----GL--~~i~~~~dt~~LPFpD~SFDlV 376 (689)
...+|||+|||+|.++..|+.. .|+++|+++. +++.|.++ ++ ...+...+.... +++++||+|
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V 185 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREE-----FAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDAL 185 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHH-----HHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHH-----HHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEE
Confidence 3568999999999988777643 4889998763 44444443 54 233444554444 777899999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
++.. +++..+|.++.++|+|||+|++..+.. .....+...+...+|..+.
T Consensus 186 ~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~~--~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 186 FLDV------PDPWNYIDKCWEALKGGGRFATVCPTT--NQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp EECC------SCGGGTHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHSSEEEEE
T ss_pred EECC------cCHHHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHHCCCceeE
Confidence 9742 245589999999999999999998752 1223355556667887654
No 173
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.86 E-value=7.5e-09 Score=104.05 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=76.4
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc-------CCC--cEEecCCCCCC-------CC
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER-------GFP--AVVSPLGNRRL-------PF 368 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR-------GL~--~i~~~~dt~~L-------PF 368 (689)
..+|||+|||+|.++..|+.+ .|+++|+++ .+++.|.++ ++. ..+...|...+ +|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~-----~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQ-----EMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSH-----HHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCH-----HHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhcc
Confidence 468999999999998877643 589999876 466666653 222 23444555554 36
Q ss_pred CCCCcceEEecccccc----------------c-cccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhccee
Q 044932 369 PSGVFDAIHCDGCSIT----------------W-HAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWN 431 (689)
Q Consensus 369 pD~SFDlVhcs~cli~----------------W-~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~ 431 (689)
++++||+|+|..-... . ......+|.++.++|||||+|++..+..... .+..++... |.
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~l~~~-~~ 187 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVA---EIIAACGSR-FG 187 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHH---HHHHHHTTT-EE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHH---HHHHHHHhc-CC
Confidence 7899999998621111 0 1135678999999999999999987765332 244455443 54
Q ss_pred E
Q 044932 432 I 432 (689)
Q Consensus 432 ~ 432 (689)
.
T Consensus 188 ~ 188 (260)
T 2ozv_A 188 G 188 (260)
T ss_dssp E
T ss_pred c
Confidence 3
No 174
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.86 E-value=2e-09 Score=112.46 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=69.8
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcceEEecc
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
..+|||+|||+|.++..++. ..|+++|+++. +++.|.+ .++...+...+.. .+++++||+|+|..
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~-----~l~~a~~~~~~~~~~~~~~~~d~~--~~~~~~fD~Iv~~~ 269 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAP-----AVEASRATLAANGVEGEVFASNVF--SEVKGRFDMIISNP 269 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHH-----HHHHHHHHHHHTTCCCEEEECSTT--TTCCSCEEEEEECC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHH-----HHHHHHHHHHHhCCCCEEEEcccc--ccccCCeeEEEECC
Confidence 35899999999999888764 26999999863 4444443 4555555444443 34578999999875
Q ss_pred cccc---c-cccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 381 CSIT---W-HAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 381 cli~---W-~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
.+.+ + ..+...+|.++.|+|||||.|++....
T Consensus 270 ~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 270 PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 4321 1 234578999999999999999998764
No 175
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.86 E-value=4.2e-09 Score=101.07 Aligned_cols=93 Identities=15% Similarity=0.059 Sum_probs=65.9
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCC-CCCCCCCcceE
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRR-LPFPSGVFDAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~-LPFpD~SFDlV 376 (689)
..+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .++. ..+...+... +|..++ ||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRD-----NVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHH-----HHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEE
Confidence 468999999999998888753 5899998864 4444443 3443 2333444433 355556 9999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
++... ..+...+|.++.|+|||||+|++.+.
T Consensus 131 ~~~~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 131 FMDCD----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEETT----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEcCC----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 97532 23567899999999999999999653
No 176
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.86 E-value=2.2e-08 Score=96.45 Aligned_cols=94 Identities=22% Similarity=0.139 Sum_probs=65.3
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCCc--EEecCCCCC-CC-CC---CCC
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFPA--VVSPLGNRR-LP-FP---SGV 372 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~~--i~~~~dt~~-LP-Fp---D~S 372 (689)
..+|||||||+|.++.+|+.. .|+++|+++. +++.|.+ .|+.. .+...+... ++ ++ .++
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEK-----HADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 478999999999999888764 4899998864 4444433 36542 344444322 11 11 267
Q ss_pred cceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 373 FDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 373 FDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
||+|++... ......+|.++.|+|||||++++.+.
T Consensus 134 fD~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 134 FDFIFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CSEEEECSC----GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred cCEEEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999997532 23456899999999999999998764
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.85 E-value=2.3e-09 Score=105.96 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=64.6
Q ss_pred CCeEEEECCccchhHHHhhcC------CeEEEEcCCcccHHHHHHHHHHc-------CCC--------------------
Q 044932 309 IRVVLEIGSADLSFVASLLAK------EVLTLTVGLKDDLVDLAQVALER-------GFP-------------------- 355 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~------~V~gmDIsp~D~seamlq~A~eR-------GL~-------------------- 355 (689)
..+|||+|||+|.++..++.. .|+++|+++. +++.|.++ ++.
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~-----~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPA-----PLELAAKNLALLSPAGLTARELERREQSERFGKPSYLE 126 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHH-----HHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHH-----HHHHHHHHHHHhhhccccccchhhhhhhhhcccccchh
Confidence 468999999999988777643 5899999874 44444422 110
Q ss_pred -------cE-------------EecCCCCCCCC------CCCCcceEEecccccc---cc-----ccHHHHHHHHHhccC
Q 044932 356 -------AV-------------VSPLGNRRLPF------PSGVFDAIHCDGCSIT---WH-----AHGGKLLLEMNRILR 401 (689)
Q Consensus 356 -------~i-------------~~~~dt~~LPF------pD~SFDlVhcs~cli~---W~-----~d~~~aL~EI~RVLR 401 (689)
.. +...+... ++ +..+||+|+|....+. |. .....+|.++.|+|+
T Consensus 127 ~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 205 (250)
T 1o9g_A 127 AAQAARRLRERLTAEGGALPCAIRTADVFD-PRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALP 205 (250)
T ss_dssp HHHHHHHHHHHHHHTTSSCCEEEEECCTTC-GGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSC
T ss_pred hhhhhhhhhhhccccccccccceeeccccc-ccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcC
Confidence 11 44444433 23 4458999998643222 11 223588999999999
Q ss_pred CCcEEEEEcCC
Q 044932 402 PSGYFILSTKH 412 (689)
Q Consensus 402 PGG~fVIsdp~ 412 (689)
|||+|++....
T Consensus 206 pgG~l~~~~~~ 216 (250)
T 1o9g_A 206 AHAVIAVTDRS 216 (250)
T ss_dssp TTCEEEEEESS
T ss_pred CCcEEEEeCcc
Confidence 99999995543
No 178
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.85 E-value=3e-09 Score=102.50 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=66.1
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCC-CCC-CC----CC
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNR-RLP-FP----SG 371 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~-~LP-Fp----D~ 371 (689)
..+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .|+. ..+...+.. .++ ++ .+
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEK-----STALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHH-----HHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCC
Confidence 468999999999999888754 4899998864 4444443 3554 334444432 222 11 17
Q ss_pred CcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 372 VFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 372 SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+||+|++.. +..+...+|.++.|+|||||+|++.+.
T Consensus 140 ~fD~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 140 QYDLIYIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CEEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CccEEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999998643 234567899999999999999999864
No 179
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.85 E-value=3.5e-09 Score=110.18 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=64.3
Q ss_pred CCCeEEEECCccchhHHHhhcC-CeEEEEc----CCcccHHHHHHHHHHcCCCcE-EecC-CCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-EVLTLTV----GLKDDLVDLAQVALERGFPAV-VSPL-GNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-~V~gmDI----sp~D~seamlq~A~eRGL~~i-~~~~-dt~~LPFpD~SFDlVhcs~ 380 (689)
+..+|||||||+|.++..|+.+ .|+++|+ ++..+. .+. +...+.+.+ +... +...+ ++.+||+|+|..
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~--~~~-~~~~~~~~v~~~~~~D~~~l--~~~~fD~V~sd~ 156 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEE--PIP-MSTYGWNLVRLQSGVDVFFI--PPERCDTLLCDI 156 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC--CCC-CCSTTGGGEEEECSCCTTTS--CCCCCSEEEECC
T ss_pred CCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHH--HHH-hhhcCCCCeEEEeccccccC--CcCCCCEEEECC
Confidence 3579999999999999988876 5999999 442110 000 001122222 3333 44444 457999999854
Q ss_pred cc--ccccccHH---HHHHHHHhccCCCcEEEEEcCCC
Q 044932 381 CS--ITWHAHGG---KLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 381 cl--i~W~~d~~---~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
.. .+|..+.. .+|.++.|+|||||.|++.....
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 32 12322222 58999999999999999976544
No 180
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.84 E-value=1.7e-09 Score=107.52 Aligned_cols=118 Identities=8% Similarity=0.006 Sum_probs=79.9
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..++.. .|+++|+++ .|+++|.++ |+...+...+.... .+.++||+|...
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~-----~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~ 122 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDR-----AEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLL 122 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCH-----HHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCH-----HHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHh
Confidence 3579999999999999888543 589999876 466666543 66533333443222 456899999875
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcCC-------Cchh-HHHHHHHHHHhcceeE
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTKH-------DSIE-EEEALTTLTASICWNI 432 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~-------~~le-~~~~ie~La~~l~W~~ 432 (689)
..+|..++...++..+.+.|+|||+||-.... .+.. ....+++.+..-.|.+
T Consensus 123 -k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~ 182 (200)
T 3fzg_A 123 -KMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKIL 182 (200)
T ss_dssp -TCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEE
T ss_pred -hHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceee
Confidence 45565556667788999999999999988732 1111 1234666666656644
No 181
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.83 E-value=1.5e-08 Score=107.50 Aligned_cols=134 Identities=14% Similarity=0.039 Sum_probs=89.1
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCC--CcEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGF--PAVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL--~~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||+|||+|.++..++.. .|+|+|+++. |++.|++ .|+ ...+...|...+|+++++||+|+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~-----~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii 291 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRK-----HLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAI 291 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHH-----HHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHH-----HHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEE
Confidence 3578999999999988777642 6999999874 4444443 466 34566778888999889999999
Q ss_pred eccccc------ccccc-HHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEe
Q 044932 378 CDGCSI------TWHAH-GGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQK 450 (689)
Q Consensus 378 cs~cli------~W~~d-~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqK 450 (689)
|..-.- ....+ ...++.++.|+| ||.+++..+.. ..+++++..++|+......-..|.....+||+
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~-----~~~~~~~~~~G~~~~~~~~~~nG~l~~~~~~~ 364 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEK-----KAIEEAIAENGFEIIHHRVIGHGGLMVHLYVV 364 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCH-----HHHHHHHHHTTEEEEEEEEEEETTEEEEEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCH-----HHHHHHHHHcCCEEEEEEEEEcCCEEEEEEec
Confidence 852110 00011 156889999999 44444444321 23566788899988765443345566777777
Q ss_pred CCC
Q 044932 451 PES 453 (689)
Q Consensus 451 p~~ 453 (689)
|..
T Consensus 365 ~~~ 367 (373)
T 3tm4_A 365 KLE 367 (373)
T ss_dssp EET
T ss_pred cCc
Confidence 644
No 182
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.83 E-value=5.1e-09 Score=110.44 Aligned_cols=118 Identities=16% Similarity=0.144 Sum_probs=82.2
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSI 383 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli 383 (689)
...+|||||||+|.++..|+.. .++++|+ | .+++.|.++ ....+...|... |+|.+ |+|++..++.
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-P-----HVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILH 270 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H-----HHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-H-----HHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhc
Confidence 4679999999999999888752 4777786 3 455555433 123344555555 78854 9999988777
Q ss_pred cccc-cHHHHHHHHHhccCCCcEEEEEcCC--C----c-h------h--------------HHHHHHHHHHhcceeEEEe
Q 044932 384 TWHA-HGGKLLLEMNRILRPSGYFILSTKH--D----S-I------E--------------EEEALTTLTASICWNILAH 435 (689)
Q Consensus 384 ~W~~-d~~~aL~EI~RVLRPGG~fVIsdp~--~----~-l------e--------------~~~~ie~La~~l~W~~v~~ 435 (689)
+|.. +...+|++++|+|||||+|+|.+.. . . . . ...++..+++..+|+.+..
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 350 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKS 350 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEE
Confidence 7753 3468999999999999999997632 0 0 0 0 1245778888888887654
No 183
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.83 E-value=7.6e-09 Score=110.41 Aligned_cols=109 Identities=11% Similarity=0.075 Sum_probs=71.9
Q ss_pred HHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCC----cEEecC
Q 044932 294 ESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFP----AVVSPL 361 (689)
Q Consensus 294 d~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~----~i~~~~ 361 (689)
..+.+.++. . ...+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++. ..+...
T Consensus 212 ~~ll~~l~~-~---~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~-----al~~Ar~n~~~ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 212 RFFMQHLPE-N---LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPM-----AVASSRLNVETNMPEALDRCEFMIN 282 (375)
T ss_dssp HHHHHTCCC-S---CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHH-----HHHHHHHHHHHHCGGGGGGEEEEEC
T ss_pred HHHHHhCcc-c---CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHH-----HHHHHHHHHHHcCCCcCceEEEEec
Confidence 345555542 1 2368999999999998887753 5999999864 4444443 3543 223444
Q ss_pred CCCCCCCCCCCcceEEecccccc--ccc-c-HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 362 GNRRLPFPSGVFDAIHCDGCSIT--WHA-H-GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 362 dt~~LPFpD~SFDlVhcs~cli~--W~~-d-~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+... ++++++||+|+|...+.+ +.. . ...+|.++.|+|||||+|++....
T Consensus 283 D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 283 NALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp STTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred hhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 4433 677889999998643221 111 1 236899999999999999998654
No 184
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.82 E-value=6.9e-09 Score=99.27 Aligned_cols=93 Identities=19% Similarity=0.150 Sum_probs=64.8
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHc----CCCc-EEecCCCCCCCCC-CCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALER----GFPA-VVSPLGNRRLPFP-SGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eR----GL~~-i~~~~dt~~LPFp-D~SFDlV 376 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.|.++ ++.. .+...+. ..+++ +++||+|
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v 150 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPE-----LAEKAERTLRKLGYDNVIVIVGDG-TLGYEPLAPYDRI 150 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHH-----HHHHHHHHHHHHTCTTEEEEESCG-GGCCGGGCCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHH-----HHHHHHHHHHHcCCCCeEEEECCc-ccCCCCCCCeeEE
Confidence 356999999999998877763 45899998763 45555443 4443 3334443 22344 6799999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
++...+.+ . ..++.|+|||||++++..++.
T Consensus 151 ~~~~~~~~-~------~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 151 YTTAAGPK-I------PEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EESSBBSS-C------CHHHHHTEEEEEEEEEEESSS
T ss_pred EECCchHH-H------HHHHHHHcCCCcEEEEEECCC
Confidence 98765433 2 248999999999999998753
No 185
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.82 E-value=2.1e-08 Score=97.49 Aligned_cols=112 Identities=17% Similarity=0.162 Sum_probs=75.7
Q ss_pred CCCeEEEECCccchhHHHhhc--CCeEEEEcCCcccHHHHHHHHHHc----CC--CcEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLA--KEVLTLTVGLKDDLVDLAQVALER----GF--PAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~--~~V~gmDIsp~D~seamlq~A~eR----GL--~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..++. ..|+++|+++ .+++.|.++ ++ ...+...+.....+++++||+|++.
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVE-----EFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD 165 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCH-----HHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCH-----HHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC
Confidence 356899999999998887774 4688999876 355555443 54 2334445544433367899999874
Q ss_pred cccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEE
Q 044932 380 GCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 380 ~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v 433 (689)
. .++..+|.++.++|+|||++++..+... ....+..++... |..+
T Consensus 166 ~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~-f~~~ 210 (248)
T 2yvl_A 166 V------REPWHYLEKVHKSLMEGAPVGFLLPTAN--QVIKLLESIENY-FGNL 210 (248)
T ss_dssp S------SCGGGGHHHHHHHBCTTCEEEEEESSHH--HHHHHHHHSTTT-EEEE
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHhh-CCcc
Confidence 2 2455899999999999999999988631 222344444444 5543
No 186
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.82 E-value=5.6e-09 Score=107.70 Aligned_cols=93 Identities=17% Similarity=0.063 Sum_probs=67.0
Q ss_pred CCCeEEEECCccchhHHHhhcC--C---eEEEEcCCcccHHHHHHHHHH----cCCCc-EEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--E---VLTLTVGLKDDLVDLAQVALE----RGFPA-VVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~---V~gmDIsp~D~seamlq~A~e----RGL~~-i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||||||+|.++..|+.. . |+++|+++. +++.|.+ .|+.. .+...+...++.++++||+|+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~-----~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv 149 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRK-----ICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIF 149 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHH-----HHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEE
Confidence 3579999999999998877642 3 999998863 4555544 36543 344556555555668999999
Q ss_pred eccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 378 CDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 378 cs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+.....+ .. .++.++|||||++++...+
T Consensus 150 ~~~~~~~-~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDE-VP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSC-CC------HHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHH-HH------HHHHHhcCCCcEEEEEECC
Confidence 8754432 22 5789999999999998754
No 187
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.82 E-value=7.2e-09 Score=103.45 Aligned_cols=98 Identities=14% Similarity=0.025 Sum_probs=68.4
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCC-CCCC-----CCCcce
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRR-LPFP-----SGVFDA 375 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~-LPFp-----D~SFDl 375 (689)
.++|||||||+|..+..|+. ..|+++|+++.... ...+.+...|+. ..+...++.. ++.. +++||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~-~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTK-HAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCC-CSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 57899999999998888774 25999999986442 223334445654 3344444432 2321 489999
Q ss_pred EEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 376 IHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
|++... ..+...+|.++.|+|||||+|++.+.
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 987532 34556789999999999999999753
No 188
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.81 E-value=4.2e-09 Score=109.03 Aligned_cols=94 Identities=18% Similarity=0.053 Sum_probs=62.5
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHc----C------------CCcEEecCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALER----G------------FPAVVSPLGNRRL 366 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eR----G------------L~~i~~~~dt~~L 366 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.|.++ + ....+...+...+
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKD-----HHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 179 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHH-----HHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHH-----HHHHHHHHHHHhhcccccccccccCCceEEEECChHHc
Confidence 357899999999998887764 34899998874 44444432 1 1233445555554
Q ss_pred --CCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 367 --PFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 367 --PFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
++++++||+|++... ++..+|.++.|+|||||+|++..+.
T Consensus 180 ~~~~~~~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 180 TEDIKSLTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp C-------EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred ccccCCCCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 577889999997532 2235899999999999999988774
No 189
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.81 E-value=1.4e-08 Score=105.42 Aligned_cols=121 Identities=17% Similarity=0.139 Sum_probs=80.0
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVh 377 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.+.+ .|+. ..+...|...++..+++||+|+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~-----~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDEN-----RLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKIL 192 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHH-----HHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHH-----HHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEE
Confidence 356899999999998887774 24899998864 4444433 3664 3455666666665567999999
Q ss_pred ecc-c----ccc--------cccc--------HHHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhcceeEE
Q 044932 378 CDG-C----SIT--------WHAH--------GGKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASICWNIL 433 (689)
Q Consensus 378 cs~-c----li~--------W~~d--------~~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l~W~~v 433 (689)
+.. | .++ |..+ ...+|.++.|+|||||+|++++-.-.. +....+..+++..+|+.+
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELL 270 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEE
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEEe
Confidence 731 1 111 1111 147899999999999999998643222 223446677777776554
No 190
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.80 E-value=8.1e-09 Score=113.78 Aligned_cols=113 Identities=15% Similarity=0.161 Sum_probs=75.3
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNR 364 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~ 364 (689)
..|.+.+.+.+.. . ...+|||||||+|.++..++.. .|+++|+++ .. ..+.+.+...|+. ..+...+..
T Consensus 144 ~~~~~~il~~l~~---~-~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l-~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 144 GTYQRAILQNHTD---F-KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MA-QHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHTGGG---T-TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HH-HHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHHhhhh---c-CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HH-HHHHHHHHHcCCCCcEEEEECchh
Confidence 3555555554432 1 3579999999999998877754 589999865 22 2223334444663 344556666
Q ss_pred CCCCCCCCcceEEecccccccc-ccHHHHHHHHHhccCCCcEEEEE
Q 044932 365 RLPFPSGVFDAIHCDGCSITWH-AHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 365 ~LPFpD~SFDlVhcs~cli~W~-~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
.++++ ++||+|+|.....++. ++....|.++.|+|||||++++.
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 77777 6899999865433433 33456788999999999999864
No 191
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.80 E-value=9.4e-09 Score=104.31 Aligned_cols=118 Identities=14% Similarity=0.067 Sum_probs=77.0
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCc-EEecCCCCCCCCCCCCcceEEecccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPA-VVSPLGNRRLPFPSGVFDAIHCDGCS 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~-i~~~~dt~~LPFpD~SFDlVhcs~cl 382 (689)
...+|||+|||+|.++..++.. .|+++|+++... ..+.+.+...++.. .+...+...+|+ +++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av-~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAY-HYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHH-HHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 3578999999999999887753 599999987422 12222233346543 344556555555 5799999876422
Q ss_pred ccccccHHHHHHHHHhccCCCcEEEEEcCCCch---hH-HHHHHHHHHhcceeE
Q 044932 383 ITWHAHGGKLLLEMNRILRPSGYFILSTKHDSI---EE-EEALTTLTASICWNI 432 (689)
Q Consensus 383 i~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~l---e~-~~~ie~La~~l~W~~ 432 (689)
....++.++.|+|+|||+++++.....- +. .+.++.+.+.+++..
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKL 245 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCee
Confidence 4457899999999999999998754311 11 233455555555443
No 192
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.79 E-value=1.5e-08 Score=99.54 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=65.0
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHH----cCCCc--EEecCCCCC-C----------
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALE----RGFPA--VVSPLGNRR-L---------- 366 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~e----RGL~~--i~~~~dt~~-L---------- 366 (689)
..+|||+|||+|.++..|+. ..|+++|+++. +++.|.+ .|+.. .+...+... +
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEE-----WTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHH-----HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccc
Confidence 46899999999998887763 35899998863 4444444 35532 233333211 1
Q ss_pred ----CCCC--CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 367 ----PFPS--GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 367 ----PFpD--~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
.|++ ++||+|++... ..+...+|.++.++|||||+|++.+
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 2554 89999998632 2345689999999999999999976
No 193
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.78 E-value=1e-08 Score=99.06 Aligned_cols=112 Identities=14% Similarity=0.160 Sum_probs=69.6
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCC--------C---CCCcc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPF--------P---SGVFD 374 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPF--------p---D~SFD 374 (689)
+..+|||+|||+|.++..++.. .|+++|+++... ..++. +...|....+. + .++||
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~---------~~~v~--~~~~D~~~~~~~~~~~~~~~~~~~~~~D 93 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE---------IAGVR--FIRCDIFKETIFDDIDRALREEGIEKVD 93 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC---------CTTCE--EEECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc---------CCCeE--EEEccccCHHHHHHHHHHhhcccCCcce
Confidence 3579999999999999998865 499999998421 01232 33344444331 1 14999
Q ss_pred eEEeccc---ccccccc-------HHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEE
Q 044932 375 AIHCDGC---SITWHAH-------GGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 375 lVhcs~c---li~W~~d-------~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v 433 (689)
+|+|... .-.|..+ ...+|.++.|+|||||.|++..-.... ...+...++. .|..+
T Consensus 94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~--~~~~~~~l~~-~F~~v 159 (191)
T 3dou_A 94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM--TNDFIAIWRK-NFSSY 159 (191)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH--HHHHHHHHGG-GEEEE
T ss_pred EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC--HHHHHHHHHH-hcCEE
Confidence 9998531 1111111 246789999999999999987644322 1234444544 35554
No 194
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.78 E-value=2.2e-08 Score=107.68 Aligned_cols=113 Identities=16% Similarity=0.164 Sum_probs=77.6
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCCc--EEecCCCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFPA--VVSPLGNR 364 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~~--i~~~~dt~ 364 (689)
..|.+.|.+-...+ ..++|||||||+|.++...+.. .|+++|.++ +...+.+.+...|+.. .+...+.+
T Consensus 69 ~aY~~Ai~~~~~~~----~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~--~~~~a~~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 69 DAYRLGILRNWAAL----RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA--IWQQAREVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHHTTHHHH----TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST--THHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhCHHhc----CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH--HHHHHHHHHHHcCCCceEEEEeeeee
Confidence 57777776433222 2478999999999877655543 599999886 2344455666677653 34445667
Q ss_pred CCCCCCCCcceEEec--cccccccccHHHHHHHHHhccCCCcEEEEE
Q 044932 365 RLPFPSGVFDAIHCD--GCSITWHAHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 365 ~LPFpD~SFDlVhcs--~cli~W~~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
.+.+| ..||+|+|- ...+.+......++...+|.|+|||.++-+
T Consensus 143 ~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 143 TVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 77777 789999973 222333345678888999999999998754
No 195
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.77 E-value=3.8e-09 Score=102.08 Aligned_cols=93 Identities=18% Similarity=0.224 Sum_probs=66.1
Q ss_pred CCCeEEEECCccchhHHHhhc--C-------CeEEEEcCCcccHHHHHHHHHHc----C-----C-CcEEecCCCCCCC-
Q 044932 308 NIRVVLEIGSADLSFVASLLA--K-------EVLTLTVGLKDDLVDLAQVALER----G-----F-PAVVSPLGNRRLP- 367 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~--~-------~V~gmDIsp~D~seamlq~A~eR----G-----L-~~i~~~~dt~~LP- 367 (689)
...+|||||||+|.++..|+. . .|+++|+++. +++.|.++ + . ...+...+....+
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKD-----LVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE 154 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHH-----HHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHH-----HHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence 357899999999998877764 2 6899998864 44444433 4 2 2334455555554
Q ss_pred ---CCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 368 ---FPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 368 ---FpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+++++||+|++.... + .++.++.++|||||++++..++
T Consensus 155 ~~~~~~~~fD~I~~~~~~-~------~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGASA-S------ELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHHHCCEEEEEECSBB-S------SCCHHHHHHEEEEEEEEEEEEE
T ss_pred ccCccCCCcCEEEECCch-H------HHHHHHHHhcCCCcEEEEEEcc
Confidence 556899999987543 3 2468899999999999998764
No 196
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.77 E-value=3.5e-09 Score=104.49 Aligned_cols=96 Identities=15% Similarity=0.120 Sum_probs=58.2
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCC---CCC---CCC
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRL---PFP---SGV 372 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~L---PFp---D~S 372 (689)
..+|||+|||+|.++..|+. ..|+++|+++. |++.|.+ .++. ..+...+...+ +++ +++
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDM-----CFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHH-----HHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHH-----HHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCc
Confidence 56899999999998877664 46999999874 4444443 3554 34444454331 455 368
Q ss_pred cceEEecccccccc--------------ccHHHHHHHHHhccCCCcEEEEE
Q 044932 373 FDAIHCDGCSITWH--------------AHGGKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 373 FDlVhcs~cli~W~--------------~d~~~aL~EI~RVLRPGG~fVIs 409 (689)
||+|+|..-.++.. .....++.++.|+|||||.+++.
T Consensus 141 fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 141 YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp BSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred ccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 99999863222111 01124567888888888877654
No 197
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.77 E-value=1.7e-08 Score=98.85 Aligned_cols=93 Identities=18% Similarity=0.151 Sum_probs=65.5
Q ss_pred CCCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHH----cCCCc-EEecCCCCCCCCCCCC-cceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALE----RGFPA-VVSPLGNRRLPFPSGV-FDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~e----RGL~~-i~~~~dt~~LPFpD~S-FDlVhc 378 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.|.+ .|+.. .+...+. .+++++.+ ||+|++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~ 164 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPE-----LVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIV 164 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHH-----HHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHH-----HHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEE
Confidence 346899999999999887765 46999998863 4444444 35433 3334443 45666554 999998
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
.....+ +..++.++|+|||++++..+..
T Consensus 165 ~~~~~~-------~~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 165 TAGAPK-------IPEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CSBBSS-------CCHHHHHTEEEEEEEEEEECSS
T ss_pred CCcHHH-------HHHHHHHhcCCCcEEEEEEecC
Confidence 754432 2348899999999999998753
No 198
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.76 E-value=6.7e-09 Score=101.16 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=67.2
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHHc----CCC--cEEecCCCCC-CCCC--CCCcce
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALER----GFP--AVVSPLGNRR-LPFP--SGVFDA 375 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~eR----GL~--~i~~~~dt~~-LPFp--D~SFDl 375 (689)
..+|||+|||+|.++..|+. ..|+++|+++ .+++.|.++ |+. ..+...+... +|+. +++||+
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDE-----RRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCH-----HHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCH-----HHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccE
Confidence 46899999999998887764 3589999876 345555443 553 3344455433 2433 589999
Q ss_pred EEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 376 IHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
|++... ..+...+|.++.++|||||++++.+.
T Consensus 130 I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 130 LFIDAA----KGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEEGG----GSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 997543 22567899999999999999999853
No 199
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.76 E-value=6e-09 Score=101.34 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=64.2
Q ss_pred CCCeEEEECCccchhHHHhhc----------CCeEEEEcCCcccHHHHHHHHHHc----C-----C-CcEEecCCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLA----------KEVLTLTVGLKDDLVDLAQVALER----G-----F-PAVVSPLGNRRLP 367 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----------~~V~gmDIsp~D~seamlq~A~eR----G-----L-~~i~~~~dt~~LP 367 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.|.++ + . ...+...+... +
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~ 157 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAE-----LVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-G 157 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHH-----HHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-C
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHH-----HHHHHHHHHHhcCccccCCCceEEEECCccc-C
Confidence 356899999999998877764 26899998864 44444332 2 1 22334444433 5
Q ss_pred CCC-CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 368 FPS-GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 368 FpD-~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+++ ++||+|++.....+ ++.++.++|||||++++...+
T Consensus 158 ~~~~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 158 YPPNAPYNAIHVGAAAPD-------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CGGGCSEEEEEECSCBSS-------CCHHHHHTEEEEEEEEEEESC
T ss_pred CCcCCCccEEEECCchHH-------HHHHHHHHhcCCCEEEEEEec
Confidence 665 79999998754322 347899999999999998765
No 200
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.74 E-value=5.5e-08 Score=98.28 Aligned_cols=130 Identities=18% Similarity=0.113 Sum_probs=86.4
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCc--EEecCCCCCC
Q 044932 293 LESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPA--VVSPLGNRRL 366 (689)
Q Consensus 293 id~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~--i~~~~dt~~L 366 (689)
+..+..+++ ...+|||||||+|.++.+|+.. .|+++|+++... ..+.+.+...|+.. .+...|....
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al-~~A~~N~~~~gl~~~I~~~~gD~l~~ 84 (230)
T 3lec_A 12 LQKVANYVP------KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPY-QSALKNVSEHGLTSKIDVRLANGLSA 84 (230)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred HHHHHHhCC------CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECchhhc
Confidence 455666654 2468999999999999888764 389999987422 12222233346643 3444554444
Q ss_pred CCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEee
Q 044932 367 PFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 367 PFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~ 436 (689)
+.++..||+|+.++..- .-...+|.+..+.|+++|+|+++.... .+.+.+.+...+|..+...
T Consensus 85 ~~~~~~~D~IviaGmGg---~lI~~IL~~~~~~l~~~~~lIlqp~~~----~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 85 FEEADNIDTITICGMGG---RLIADILNNDIDKLQHVKTLVLQPNNR----EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp CCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHHHTTEEEEEEE
T ss_pred cccccccCEEEEeCCch---HHHHHHHHHHHHHhCcCCEEEEECCCC----hHHHHHHHHHCCCEEEEEE
Confidence 45545799987543210 012368888899999999999998543 3458888999999987654
No 201
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.74 E-value=5.9e-08 Score=105.51 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=79.3
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCC--CCCCCcce
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLP--FPSGVFDA 375 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LP--FpD~SFDl 375 (689)
...+|||+|||+|..+..|+. ..|+++|+++. +++.+.+ .|+. ..+...|...++ |++++||+
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~-----~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKM-----RMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHH-----HHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHH-----HHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCE
Confidence 346899999999998877764 35899998863 4444433 3664 345556666665 77789999
Q ss_pred EEe----cc-ccccccccH----------------HHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhc-ceeE
Q 044932 376 IHC----DG-CSITWHAHG----------------GKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASI-CWNI 432 (689)
Q Consensus 376 Vhc----s~-cli~W~~d~----------------~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l-~W~~ 432 (689)
|++ +. ..++-.++. ..+|.++.++|||||+|++++-.-.. +....+..+++.. +|+.
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~ 413 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKL 413 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEE
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEE
Confidence 995 22 111111111 46899999999999999998754332 2233466666664 5655
Q ss_pred E
Q 044932 433 L 433 (689)
Q Consensus 433 v 433 (689)
.
T Consensus 414 ~ 414 (450)
T 2yxl_A 414 V 414 (450)
T ss_dssp C
T ss_pred e
Confidence 3
No 202
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.73 E-value=1.4e-08 Score=106.78 Aligned_cols=120 Identities=16% Similarity=-0.011 Sum_probs=76.6
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC---cEEecCCCCCCC-C---CCCCcce
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP---AVVSPLGNRRLP-F---PSGVFDA 375 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~---~i~~~~dt~~LP-F---pD~SFDl 375 (689)
..+|||+|||+|.++..++.. .|+++|+++. +++.|.+ .++. ..+...|...+. . .+++||+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~-----al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKK-----AIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHH-----HHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHH-----HHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 468999999999999888754 5889998764 4544443 3554 344445543321 1 1579999
Q ss_pred EEeccc---------cccccccHHHHHHHHHhccCCCcEEEEEcCCCchh---H-HHHHHHHHHhcceeEE
Q 044932 376 IHCDGC---------SITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIE---E-EEALTTLTASICWNIL 433 (689)
Q Consensus 376 Vhcs~c---------li~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le---~-~~~ie~La~~l~W~~v 433 (689)
|++.-- ..++..+...+|.++.++|+|||+|++........ . ...+.+.+..+++...
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 998311 11223345688999999999999988876443221 1 2334445556666553
No 203
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.72 E-value=5.6e-09 Score=116.67 Aligned_cols=97 Identities=18% Similarity=0.092 Sum_probs=69.8
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHH----HcC-CCcEEecCCCCCC--CCCCCCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVAL----ERG-FPAVVSPLGNRRL--PFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~----eRG-L~~i~~~~dt~~L--PFpD~SFDlVhc 378 (689)
...+|||||||+|.++..|+.. .|+|+|+++. +++.|+ +.| +...|...+.+.| ++.+++||+|+|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~-----~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQE-----NINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHH-----HHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEE
Confidence 3568999999999999988865 4999998864 444443 445 4556666666666 577899999999
Q ss_pred ccccccccccHH--HHHHHHHhccCCCcEEEEEc
Q 044932 379 DGCSITWHAHGG--KLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 379 s~cli~W~~d~~--~aL~EI~RVLRPGG~fVIsd 410 (689)
..++.| ..++. ..+..+.+.|+++|..++..
T Consensus 141 ~e~~eh-v~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 141 LSVFHH-IVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp ESCHHH-HHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred Ccchhc-CCCHHHHHHHHHHHHHhccccceeeEE
Confidence 876644 55543 34556777788888766653
No 204
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.71 E-value=4.5e-08 Score=101.31 Aligned_cols=98 Identities=15% Similarity=0.159 Sum_probs=65.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc----------CCCcEEecCCCCC-CCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER----------GFPAVVSPLGNRR-LPFPSGV 372 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR----------GL~~i~~~~dt~~-LPFpD~S 372 (689)
..++|||||||+|.++..++.. .|+++|+++. +++.|+++ .....+...|... ++.++++
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~-----vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 157 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG-----VVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTT-----HHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCC
Confidence 4689999999999999888865 4899999885 55555442 1122344445433 4456789
Q ss_pred cceEEeccccccccccH----HHHHHHHHhccCCCcEEEEEcC
Q 044932 373 FDAIHCDGCSITWHAHG----GKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 373 FDlVhcs~cli~W~~d~----~~aL~EI~RVLRPGG~fVIsdp 411 (689)
||+|++... .++.... ..++.++.|+|+|||+|++...
T Consensus 158 fDvIi~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 158 FDVIISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEEEEECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccEEEECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 999998422 1222111 5789999999999999999753
No 205
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.71 E-value=5.7e-08 Score=99.02 Aligned_cols=125 Identities=17% Similarity=0.082 Sum_probs=84.7
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCCc--EEecCC
Q 044932 293 LESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFPA--VVSPLG 362 (689)
Q Consensus 293 id~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~~--i~~~~d 362 (689)
+..+.++++ ...+|||||||+|.++.+|+.. .|+++|+++. +++.|.+ .|+.. .+...|
T Consensus 12 L~~i~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~-----al~~A~~N~~~~gl~~~I~v~~gD 80 (244)
T 3gnl_A 12 LEKVASYIT------KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDG-----PFQSAQKQVRSSGLTEQIDVRKGN 80 (244)
T ss_dssp HHHHHTTCC------SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHH-----HHHHHHHHHHHTTCTTTEEEEECS
T ss_pred HHHHHHhCC------CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCceEEEEecc
Confidence 455666664 2468999999999999888764 3899999874 4444443 46643 344444
Q ss_pred CCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEe
Q 044932 363 NRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 363 t~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~ 435 (689)
......++..||+|+.++..- .-...+|.+..+.|+++|+|+++.... ...+.+.+...+|..+..
T Consensus 81 ~l~~~~~~~~~D~IviagmGg---~lI~~IL~~~~~~L~~~~~lIlq~~~~----~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 81 GLAVIEKKDAIDTIVIAGMGG---TLIRTILEEGAAKLAGVTKLILQPNIA----AWQLREWSEQNNWLITSE 146 (244)
T ss_dssp GGGGCCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHHHHTEEEEEE
T ss_pred hhhccCccccccEEEEeCCch---HHHHHHHHHHHHHhCCCCEEEEEcCCC----hHHHHHHHHHCCCEEEEE
Confidence 444434434699987543210 012278888999999999999997542 345778888899998654
No 206
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.70 E-value=3.2e-08 Score=103.23 Aligned_cols=116 Identities=9% Similarity=0.108 Sum_probs=78.8
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSIT 384 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~ 384 (689)
..+|||||||+|.++..|+.. .++++|+ | .+++.|.+.. ...+...|... |+| +||+|++..++.+
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-----~~~~~a~~~~-~v~~~~~d~~~-~~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P-----QVVGNLTGNE-NLNFVGGDMFK-SIP--SADAVLLKWVLHD 263 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H-----HHHSSCCCCS-SEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H-----HHHhhcccCC-CcEEEeCccCC-CCC--CceEEEEcccccC
Confidence 579999999999998888753 3677786 3 3555443311 12333445444 677 4999999876655
Q ss_pred ccccHH--HHHHHHHhccCC---CcEEEEEcCC-----Cc-----hh----------------HHHHHHHHHHhcceeEE
Q 044932 385 WHAHGG--KLLLEMNRILRP---SGYFILSTKH-----DS-----IE----------------EEEALTTLTASICWNIL 433 (689)
Q Consensus 385 W~~d~~--~aL~EI~RVLRP---GG~fVIsdp~-----~~-----le----------------~~~~ie~La~~l~W~~v 433 (689)
| .+.. .+|.++.|+|+| ||+|+|.+.. .. .. ...++..+++..+|+.+
T Consensus 264 ~-~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 342 (358)
T 1zg3_A 264 W-NDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSY 342 (358)
T ss_dssp S-CHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEE
T ss_pred C-CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCee
Confidence 4 4544 899999999999 9999997531 10 00 12457778888888776
Q ss_pred Ee
Q 044932 434 AH 435 (689)
Q Consensus 434 ~~ 435 (689)
..
T Consensus 343 ~~ 344 (358)
T 1zg3_A 343 KI 344 (358)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 207
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.70 E-value=1.1e-07 Score=102.50 Aligned_cols=124 Identities=15% Similarity=0.117 Sum_probs=79.8
Q ss_pred CCCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCC--CCCCCcceEEe---
Q 044932 308 NIRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLP--FPSGVFDAIHC--- 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LP--FpD~SFDlVhc--- 378 (689)
...+|||+|||+|.++..|+. ..|+++|+++... ....+.+...|+...+...|...++ |++++||+|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l-~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL-SRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTH-HHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 356899999999998887764 3599999998533 2223333444766556666766665 67789999985
Q ss_pred -ccc-cccccccH----------------HHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhc-ceeE
Q 044932 379 -DGC-SITWHAHG----------------GKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASI-CWNI 432 (689)
Q Consensus 379 -s~c-li~W~~d~----------------~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l-~W~~ 432 (689)
+.. .++-.++. ..+|.++.++|||||++++++-.-.. +....+..+++.. .|+.
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~ 398 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEE
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEE
Confidence 221 11111111 36799999999999999998743222 2223455555543 4544
No 208
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.70 E-value=5.6e-08 Score=97.84 Aligned_cols=129 Identities=17% Similarity=0.156 Sum_probs=83.3
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCc--EEecCCCCCC
Q 044932 293 LESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPA--VVSPLGNRRL 366 (689)
Q Consensus 293 id~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~--i~~~~dt~~L 366 (689)
+..+..+++ ...+|||||||+|.++.+|+.. .|+++|+++... ..+.+.+...|+.. .+...|.. -
T Consensus 6 L~~l~~~v~------~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-~~A~~N~~~~gl~~~i~~~~~d~l-~ 77 (225)
T 3kr9_A 6 LELVASFVS------QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPY-QSAVKNVEAHGLKEKIQVRLANGL-A 77 (225)
T ss_dssp HHHHHTTSC------TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-HHHHHHHHHTTCTTTEEEEECSGG-G
T ss_pred HHHHHHhCC------CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEEECchh-h
Confidence 345556554 2468999999999999888764 389999987422 12223333446653 33333331 1
Q ss_pred CCCCC-CcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEee
Q 044932 367 PFPSG-VFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAHK 436 (689)
Q Consensus 367 PFpD~-SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~~ 436 (689)
+++.+ .||+|+.++..- .-...+|.+....|+|+|+|+++.... ...+...+...+|..+...
T Consensus 78 ~l~~~~~~D~IviaG~Gg---~~i~~Il~~~~~~L~~~~~lVlq~~~~----~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 78 AFEETDQVSVITIAGMGG---RLIARILEEGLGKLANVERLILQPNNR----EDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp GCCGGGCCCEEEEEEECH---HHHHHHHHHTGGGCTTCCEEEEEESSC----HHHHHHHHHHTTEEEEEEE
T ss_pred hcccCcCCCEEEEcCCCh---HHHHHHHHHHHHHhCCCCEEEEECCCC----HHHHHHHHHHCCCEEEEEE
Confidence 34433 699887543210 012378889999999999999977632 2447788899999987653
No 209
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.69 E-value=2.9e-08 Score=99.33 Aligned_cols=93 Identities=13% Similarity=0.120 Sum_probs=65.2
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHH----HcCCC--cEEecCCCCC-CC-C-----CC
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVAL----ERGFP--AVVSPLGNRR-LP-F-----PS 370 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~----eRGL~--~i~~~~dt~~-LP-F-----pD 370 (689)
.++|||||||+|..+..|+. ..|+++|+++. +++.|+ ..|+. ..+...++.. +| + ++
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~-----~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE-----NYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH-----HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCC
Confidence 46899999999998877763 35999999884 344443 34553 2333344322 33 2 25
Q ss_pred CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 371 GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 371 ~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
++||+|++... ..+...+|.++.|+|||||+|++..
T Consensus 155 ~~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 89999997532 3356689999999999999999875
No 210
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.68 E-value=1.1e-07 Score=100.70 Aligned_cols=117 Identities=15% Similarity=0.111 Sum_probs=78.2
Q ss_pred CCeEEEECCccchhHHHhhc----CCeEEEEcCCcccHHHHHHHHHH----cCC-CcEEecCCCCC-CCC-CCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLA----KEVLTLTVGLKDDLVDLAQVALE----RGF-PAVVSPLGNRR-LPF-PSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----~~V~gmDIsp~D~seamlq~A~e----RGL-~~i~~~~dt~~-LPF-pD~SFDlVh 377 (689)
..+|||+| |+|.++..++. ..|+++|+++. |++.|.+ .|+ ...+...|... +|. .+++||+|+
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~-----~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDER-----LTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHH-----HHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEE
Confidence 57999999 99998877763 25899998864 5555544 366 34455666666 774 467999999
Q ss_pred eccccccccccHHHHHHHHHhccCCCc-EEEEEcCC--CchhHHHHHHHHHH-hcceeEE
Q 044932 378 CDGCSITWHAHGGKLLLEMNRILRPSG-YFILSTKH--DSIEEEEALTTLTA-SICWNIL 433 (689)
Q Consensus 378 cs~cli~W~~d~~~aL~EI~RVLRPGG-~fVIsdp~--~~le~~~~ie~La~-~l~W~~v 433 (689)
+......+ ....+|.++.|+||||| .++++... .....+..+..++. .+++...
T Consensus 247 ~~~p~~~~--~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 247 TDPPETLE--AIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp ECCCSSHH--HHHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEE
T ss_pred ECCCCchH--HHHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchh
Confidence 86422221 24688999999999999 44555443 33322344666666 7777653
No 211
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.68 E-value=7.8e-08 Score=99.76 Aligned_cols=98 Identities=19% Similarity=0.218 Sum_probs=66.3
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------CC---CcEEecCCCCC-CCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------GF---PAVVSPLGNRR-LPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------GL---~~i~~~~dt~~-LPFpD~SF 373 (689)
..++|||||||+|.++..++.. .|+++|+++ .+++.|+++ ++ ...+...|+.. ++..+++|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDE-----DVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH-----HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCc
Confidence 4579999999999999988764 488999886 456665543 21 22334444432 44556899
Q ss_pred ceEEeccccccccc----cHHHHHHHHHhccCCCcEEEEEcC
Q 044932 374 DAIHCDGCSITWHA----HGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 374 DlVhcs~cli~W~~----d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
|+|++... .++.. ....++.++.|+|+|||+|++...
T Consensus 170 D~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 170 DVIITDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEEEECC------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 99997432 22211 124689999999999999999863
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.67 E-value=3.6e-08 Score=97.04 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=66.2
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCC----CCCCCCC--C
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGN----RRLPFPS--G 371 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt----~~LPFpD--~ 371 (689)
.++|||+|||+|.++.+|+.. .|+++|+++. +++.|.+ .|+. ..+...+. ..+++.+ +
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-----~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN-----ATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-----HHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 468999999999998888753 4899998863 4444443 3553 22333332 2344444 7
Q ss_pred CcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 372 VFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 372 SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+||+|++... ..+...+|.++.|+|||||+|++.+.
T Consensus 148 ~fD~V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 148 EFDLIFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CEEEEEECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CcCEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9999997532 23556899999999999999999753
No 213
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.67 E-value=2e-08 Score=104.27 Aligned_cols=114 Identities=12% Similarity=0.136 Sum_probs=72.4
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccc--hhHHHhh-----cCCeEEEEcCCcccHHHHHHHHHHc--CCC---cE
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADL--SFVASLL-----AKEVLTLTVGLKDDLVDLAQVALER--GFP---AV 357 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtG--sfaa~La-----~~~V~gmDIsp~D~seamlq~A~eR--GL~---~i 357 (689)
..|+....++++. .. .++.|||||||++ .+...++ +..|+++|.+| .|++.|+++ +.+ ..
T Consensus 63 r~fl~rav~~l~~-~~--g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp-----~mLa~Ar~~l~~~~~~~~~ 134 (277)
T 3giw_A 63 RDWMNRAVAHLAK-EA--GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDP-----IVLTLSQGLLASTPEGRTA 134 (277)
T ss_dssp HHHHHHHHHHHHH-TS--CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCH-----HHHHTTHHHHCCCSSSEEE
T ss_pred HHHHHHHHHHhcc-cc--CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCCh-----HHHHHHHHHhccCCCCcEE
Confidence 3555555555431 11 4789999999973 2222222 34699999886 577777664 211 33
Q ss_pred EecCCCCCCC----CC--CCCcc-----eEEecccccccccc---HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 358 VSPLGNRRLP----FP--SGVFD-----AIHCDGCSITWHAH---GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 358 ~~~~dt~~LP----Fp--D~SFD-----lVhcs~cli~W~~d---~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
+...|...++ .+ +++|| +|++. ..+||..+ +..+|.++.++|+|||+|+++...
T Consensus 135 ~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~-avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 135 YVEADMLDPASILDAPELRDTLDLTRPVALTVI-AIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp EEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEE-SCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred EEEecccChhhhhcccccccccCcCCcchHHhh-hhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 4455554431 11 35666 35554 45677766 468999999999999999999644
No 214
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.67 E-value=1e-07 Score=90.57 Aligned_cols=107 Identities=8% Similarity=-0.014 Sum_probs=69.3
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
..+|||+|||+|.++..++.. .|+++|+++ .+++.|.++-....+...+...+| ++||+|++...+.++
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDP-----DAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSV 123 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCH-----HHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC---
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhc
Confidence 568999999999998888754 489999876 577777766323344455555554 799999987544332
Q ss_pred cc-cHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcc
Q 044932 386 HA-HGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASIC 429 (689)
Q Consensus 386 ~~-d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~ 429 (689)
.. ....++.++.|+| |+.+++. .+... ..+..++...+
T Consensus 124 ~~~~~~~~l~~~~~~~--g~~~~~~-~~~~~---~~~~~~~~~~g 162 (200)
T 1ne2_A 124 VKHSDRAFIDKAFETS--MWIYSIG-NAKAR---DFLRREFSARG 162 (200)
T ss_dssp ----CHHHHHHHHHHE--EEEEEEE-EGGGH---HHHHHHHHHHE
T ss_pred cCchhHHHHHHHHHhc--CcEEEEE-cCchH---HHHHHHHHHCC
Confidence 22 2247899999999 5544444 33322 33556666665
No 215
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.63 E-value=4.4e-08 Score=94.55 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=64.2
Q ss_pred CCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCCC-C-CCC----CCcce
Q 044932 309 IRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRRL-P-FPS----GVFDA 375 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~L-P-FpD----~SFDl 375 (689)
..+|||+|||+|.++.+|+.. .|+++|+++.... .+.+.+...|+. ..+...+.... + +++ ++||+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~-~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPE-LGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHH-HHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 468999999999998888752 5899999884221 122222333552 23333333211 1 211 78999
Q ss_pred EEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 376 IHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 376 Vhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
|++... ..+...++.++.|+|||||++++.+
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 998532 2345689999999999999999965
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.63 E-value=4.3e-08 Score=103.39 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=68.2
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------CC---CcEEecCCCCC-C-CCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------GF---PAVVSPLGNRR-L-PFPSGV 372 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------GL---~~i~~~~dt~~-L-PFpD~S 372 (689)
..++|||||||+|.++..|+.. .|+++|+++ .+++.|+++ ++ ...+...|... + .+++++
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~-----~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK-----MVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH-----HHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCC
Confidence 4579999999999999988864 489999886 456666543 22 23344444332 2 245689
Q ss_pred cceEEeccccccccc-c---HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 373 FDAIHCDGCSITWHA-H---GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 373 FDlVhcs~cli~W~~-d---~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
||+|++... .++.. . ...++.++.|+|+|||+|++....
T Consensus 195 fDlIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 195 YDAVIVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEEEEECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ccEEEECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 999998532 12221 1 258999999999999999997433
No 217
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.62 E-value=1.5e-07 Score=96.34 Aligned_cols=110 Identities=19% Similarity=0.250 Sum_probs=71.1
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC--cEEecCCCCCCCCCCCCc---ceE
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP--AVVSPLGNRRLPFPSGVF---DAI 376 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~--~i~~~~dt~~LPFpD~SF---DlV 376 (689)
..+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .|+. ..+...+... +++ ++| |+|
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~-----al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~I 196 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSK-----AVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMI 196 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHH-----HHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEE
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEE
Confidence 458999999999998877643 5999999863 4555443 3654 3444444433 333 589 999
Q ss_pred Eecccccc----------cc--------ccHHHHHHHHH-hccCCCcEEEEEcCCCchhHHHHHHHHHHhc
Q 044932 377 HCDGCSIT----------WH--------AHGGKLLLEMN-RILRPSGYFILSTKHDSIEEEEALTTLTASI 428 (689)
Q Consensus 377 hcs~cli~----------W~--------~d~~~aL~EI~-RVLRPGG~fVIsdp~~~le~~~~ie~La~~l 428 (689)
+|.--.+. |. .+...++.++. ++|+|||+|++........ .+..++...
T Consensus 197 vsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~---~v~~~~~~~ 264 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVE---ELKKIVSDT 264 (284)
T ss_dssp EECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHH---HHTTTSTTC
T ss_pred EEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHH---HHHHHHHhC
Confidence 98511110 11 12237899999 9999999999976654322 344555443
No 218
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.62 E-value=2e-07 Score=95.12 Aligned_cols=99 Identities=14% Similarity=0.187 Sum_probs=68.7
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------CC---CcEEecCCCCC-CCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------GF---PAVVSPLGNRR-LPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------GL---~~i~~~~dt~~-LPFpD~SF 373 (689)
..++|||||||+|.++..++.. .|+++|++| .+++.|++. ++ ...+...|+.. ++..+++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~-----~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~f 149 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDG-----KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQY 149 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCH-----HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCH-----HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCe
Confidence 4679999999999999888764 489999886 456666543 22 12344445432 34456899
Q ss_pred ceEEeccccccccc----cHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 374 DAIHCDGCSITWHA----HGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 374 DlVhcs~cli~W~~----d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|+|++.... ++.. ....++.++.|+|+|||.|++....
T Consensus 150 D~Ii~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 150 DVIMVDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEEEESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred eEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999985322 2211 1257999999999999999998644
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.61 E-value=6.9e-08 Score=100.92 Aligned_cols=99 Identities=17% Similarity=0.097 Sum_probs=65.9
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcC------C---CcEEecCCCCC-CCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERG------F---PAVVSPLGNRR-LPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRG------L---~~i~~~~dt~~-LPFpD~SF 373 (689)
..++|||||||+|.++..++.. .|+++|+++ .+++.|+++- + ...+...|+.. ++..+++|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 182 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDE-----MVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEF 182 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCH-----HHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCc
Confidence 3579999999999999888754 488898876 5677776642 1 12334444332 33456899
Q ss_pred ceEEeccccccccccH----HHHHHHHHhccCCCcEEEEEcCC
Q 044932 374 DAIHCDGCSITWHAHG----GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 374 DlVhcs~cli~W~~d~----~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|+|++... .++.... ..++.++.|+|+|||+|++....
T Consensus 183 D~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~ 224 (314)
T 2b2c_A 183 DVIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGES 224 (314)
T ss_dssp EEEEECCC--------------HHHHHHHHEEEEEEEEEECCC
T ss_pred eEEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCC
Confidence 99997532 2222111 57899999999999999998643
No 220
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.60 E-value=5e-07 Score=85.82 Aligned_cols=114 Identities=13% Similarity=0.056 Sum_probs=74.3
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc----CCCcEEecCCCCCCCCCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER----GFPAVVSPLGNRRLPFPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR----GL~~i~~~~dt~~LPFpD~SFDlVhcs~ 380 (689)
...+|||+|||+|.++..++.. .|+++|+++ .+++.|.++ ++...+...+...+| .+||+|++..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDK-----EAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH-----HHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECC
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCH-----HHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcC
Confidence 3578999999999999888754 489999876 456666554 444445555655553 5899999864
Q ss_pred cccccc-ccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEE
Q 044932 381 CSITWH-AHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 381 cli~W~-~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v 433 (689)
-...+. .....+|.++.++| ||.+++..++. .....+..++...+|...
T Consensus 121 p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~--~~~~~~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 121 PFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKP--EVRRFIEKFSWEHGFVVT 170 (207)
T ss_dssp CCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCH--HHHHHHHHHHHHTTEEEE
T ss_pred CCccccCCchHHHHHHHHHhc--CcEEEEEeCCc--CCHHHHHHHHHHCCCeEE
Confidence 322222 22357899999999 66555442221 122346667777888664
No 221
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.60 E-value=4.1e-08 Score=101.99 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=67.9
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------C-C---CcEEecCCCCC-CCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------G-F---PAVVSPLGNRR-LPFPSGV 372 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------G-L---~~i~~~~dt~~-LPFpD~S 372 (689)
..++|||||||+|.++..++.. .|+++|+++ .+++.|+++ + + ...+...|... ++..+++
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~ 151 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDG-----ELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEER 151 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCH-----HHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH-----HHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCC
Confidence 4579999999999999988765 489999886 455555543 1 1 22344445433 4445789
Q ss_pred cceEEeccccccc---cc--c--HHHHHHHHHhccCCCcEEEEEc
Q 044932 373 FDAIHCDGCSITW---HA--H--GGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 373 FDlVhcs~cli~W---~~--d--~~~aL~EI~RVLRPGG~fVIsd 410 (689)
||+|++... .++ .. . ...++.++.|+|+|||+|++..
T Consensus 152 fD~Ii~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 152 YDVVIIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999998632 243 11 1 2588999999999999999974
No 222
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.59 E-value=7.8e-08 Score=99.10 Aligned_cols=99 Identities=20% Similarity=0.183 Sum_probs=66.3
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------CC---CcEEecCCCCC-CCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------GF---PAVVSPLGNRR-LPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------GL---~~i~~~~dt~~-LPFpD~SF 373 (689)
...+|||||||+|.++..++.. .|+++|+++ .+++.|+++ ++ ...+...|... ++..+++|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 164 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDG-----LVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEF 164 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCH-----HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH-----HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCc
Confidence 3579999999999999888864 489999886 355555543 11 22333444322 34456899
Q ss_pred ceEEeccccccccc-----cHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 374 DAIHCDGCSITWHA-----HGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 374 DlVhcs~cli~W~~-----d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|+|++... .+|.. ....++.++.|+|+|||+|++....
T Consensus 165 D~Ii~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 165 DVIIIDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred eEEEEcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99997421 12211 1257899999999999999998654
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.59 E-value=1.1e-07 Score=97.31 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=68.4
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcC---------CCcEEecCCCCC-CCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERG---------FPAVVSPLGNRR-LPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRG---------L~~i~~~~dt~~-LPFpD~SF 373 (689)
..++|||||||+|.++..++.. .|+++|+++ .+++.|+++- -...+...|... ++..+++|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE-----TVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 152 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH-----HHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCc
Confidence 4579999999999999888754 488999876 5677776641 112333444322 22236899
Q ss_pred ceEEecccccccccc--H--HHHHHHHHhccCCCcEEEEEcCC
Q 044932 374 DAIHCDGCSITWHAH--G--GKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 374 DlVhcs~cli~W~~d--~--~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|+|++... .++... . ..++.++.|+|+|||+|++....
T Consensus 153 D~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 153 DVIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EEEEEECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred eEEEEcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 99997432 222211 1 58999999999999999998654
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.59 E-value=8.6e-08 Score=97.59 Aligned_cols=91 Identities=16% Similarity=0.137 Sum_probs=64.3
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC---------CCcEEecCCCCCCCCCCCCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG---------FPAVVSPLGNRRLPFPSGVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG---------L~~i~~~~dt~~LPFpD~SFDlV 376 (689)
..++|||||||+|.++..++.. .|+++|+++ .+++.|+++- -...+...|+... . ++||+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~-----~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~--~-~~fD~I 143 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADE-----KILDSFISFFPHFHEVKNNKNFTHAKQLLDLD--I-KKYDLI 143 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCH-----HHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC--C-CCEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCH-----HHHHHHHHHHHhhccccCCCeEEEEechHHHH--H-hhCCEE
Confidence 4579999999999998877754 488888875 4666665431 1123344444443 3 799999
Q ss_pred EeccccccccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 377 HCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 377 hcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
++.. .++..++.++.|+|+|||.|++....
T Consensus 144 i~d~------~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 144 FCLQ------EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp EESS------CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EECC------CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9752 23445899999999999999997543
No 225
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.57 E-value=7.3e-08 Score=100.70 Aligned_cols=99 Identities=15% Similarity=0.189 Sum_probs=68.2
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcC------C---CcEEecCCCCC-CCCCCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERG------F---PAVVSPLGNRR-LPFPSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRG------L---~~i~~~~dt~~-LPFpD~SF 373 (689)
...+|||||||+|.++..++.. .|+++|+++ .+++.|+++- + ...+...|... ++..+++|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~-----~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 190 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDE-----TVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 190 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCH-----HHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCH-----HHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCc
Confidence 3579999999999999888764 488999876 5677776642 1 12233344322 33346899
Q ss_pred ceEEeccccccccc--c--HHHHHHHHHhccCCCcEEEEEcCC
Q 044932 374 DAIHCDGCSITWHA--H--GGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 374 DlVhcs~cli~W~~--d--~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
|+|++... .++.. . ...++.++.|+|+|||+|++....
T Consensus 191 DvIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 191 DVIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eEEEECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99997532 12221 1 158899999999999999997644
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.57 E-value=2.4e-07 Score=98.88 Aligned_cols=122 Identities=12% Similarity=0.044 Sum_probs=76.6
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC---cEEecCCCCC-CCC---CCCCcceEEe
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP---AVVSPLGNRR-LPF---PSGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~---~i~~~~dt~~-LPF---pD~SFDlVhc 378 (689)
..+|||+|||+|.++..++.. .|+++|+++... ..+.+.+...|+. ..+...|+.. ++. ...+||+|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al-~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSR-ALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHH-HHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 468999999999999888753 599999998533 2222333445664 3444555432 221 2468999997
Q ss_pred cc--------ccccccccHHHHHHHHHhccCCCcEEEEEcCCCchh---HHHHHHHHHHhccee
Q 044932 379 DG--------CSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIE---EEEALTTLTASICWN 431 (689)
Q Consensus 379 s~--------cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le---~~~~ie~La~~l~W~ 431 (689)
.- +..........++.++.++|+|||+|+++..+.... -.+.+...+...++.
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 31 111111223456788899999999999998664432 123455556666555
No 227
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.57 E-value=3.6e-08 Score=99.84 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=73.5
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCC----CCCCc
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPF----PSGVF 373 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPF----pD~SF 373 (689)
...+|||+|||+|.++..|+. ..|+++|+++. +++.+.+ .|+. ..+...|...++. ++++|
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~-----~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKT-----RTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHH-----HHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHH-----HHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccC
Confidence 356899999999999877764 35999999864 4444333 3664 3344455555543 35799
Q ss_pred ceEEec-ccc----cc----c--------cccHHHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHh
Q 044932 374 DAIHCD-GCS----IT----W--------HAHGGKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTAS 427 (689)
Q Consensus 374 DlVhcs-~cl----i~----W--------~~d~~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~ 427 (689)
|+|++. -|. +. | ......+|.++.++|||||+|++++-.-.. +....+..+++.
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 999974 121 10 1 123467899999999999999998753222 222335555543
No 228
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.57 E-value=7.9e-08 Score=101.32 Aligned_cols=97 Identities=13% Similarity=0.165 Sum_probs=67.7
Q ss_pred CeEEEECCccchhHHHhhc-C---CeEEEEcCCcccHHHHHHHHHHc-CC----CcEEecCCCCCC--CCCCCCcceEEe
Q 044932 310 RVVLEIGSADLSFVASLLA-K---EVLTLTVGLKDDLVDLAQVALER-GF----PAVVSPLGNRRL--PFPSGVFDAIHC 378 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~-~---~V~gmDIsp~D~seamlq~A~eR-GL----~~i~~~~dt~~L--PFpD~SFDlVhc 378 (689)
.+|||||||+|.++.+|+. . .|+++|+++ .+++.|+++ ++ ...+...|+... .+++++||+|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp-----~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDA-----ELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCH-----HHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCH-----HHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 4899999999999988875 2 488899876 577888775 22 123444454332 356789999997
Q ss_pred cccc---ccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 379 DGCS---ITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 379 s~cl---i~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
.... .+.+.....+|.++.|+|+|||+|++...
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 4211 11111225799999999999999998764
No 229
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.55 E-value=1.1e-07 Score=94.11 Aligned_cols=93 Identities=11% Similarity=0.098 Sum_probs=64.9
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHH----HcCCC--cEEecCCCCC-CC-C-----CC
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVAL----ERGFP--AVVSPLGNRR-LP-F-----PS 370 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~----eRGL~--~i~~~~dt~~-LP-F-----pD 370 (689)
.++|||||||+|..+..|+. ..|+++|+++. +++.|+ +.|+. ..+...++.. ++ + ++
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-----~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDRE-----AYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHH-----HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 57899999999998877763 35899998874 444443 34664 2333344322 22 2 25
Q ss_pred CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 371 GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 371 ~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
++||+|++.. +..+...+|.++.++|||||++++..
T Consensus 146 ~~fD~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 146 GSYDFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCEEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 8999999753 23455689999999999999999975
No 230
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.54 E-value=5.5e-07 Score=93.86 Aligned_cols=138 Identities=9% Similarity=0.056 Sum_probs=85.5
Q ss_pred CCCeEEEECCccchhHHHhhc---------CCeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcc
Q 044932 308 NIRVVLEIGSADLSFVASLLA---------KEVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFD 374 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~---------~~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFD 374 (689)
...+|||+|||+|.|+..++. ..++|+|+++. +++.|.. .|+...+...|+.. ++++..||
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~-----~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD 203 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDL-----LISLALVGADLQRQKMTLLHQDGLA-NLLVDPVD 203 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHH-----HHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHH-----HHHHHHHHHHhCCCCceEEECCCCC-ccccCCcc
Confidence 346899999999998766542 35899999874 3444433 46655555555543 34568999
Q ss_pred eEEecccccccccc----------------H-HHHHHHHHhccCCCcEEEEEcCCCchh--HHHHHHHHHHhcceeE--E
Q 044932 375 AIHCDGCSITWHAH----------------G-GKLLLEMNRILRPSGYFILSTKHDSIE--EEEALTTLTASICWNI--L 433 (689)
Q Consensus 375 lVhcs~cli~W~~d----------------~-~~aL~EI~RVLRPGG~fVIsdp~~~le--~~~~ie~La~~l~W~~--v 433 (689)
+|++.--.-.|..+ . ..++..+.+.|+|||++++..|...+. ....+.+.+...+|.. +
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii 283 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGII 283 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEE
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEee
Confidence 99986321111110 1 157899999999999999998765432 2345666666666643 2
Q ss_pred EeeccccC----ceeEEEEEeC
Q 044932 434 AHKTDEIS----EMGVKIYQKP 451 (689)
Q Consensus 434 ~~~~~~~g----~~~i~IwqKp 451 (689)
.-..+.+. ...|.+++|.
T Consensus 284 ~lp~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 284 KLPETLFKSEQARKSILILEKA 305 (344)
T ss_dssp ECCGGGSCC-CCCEEEEEEEEC
T ss_pred eCChhhccCCCCceEEEEEECC
Confidence 22222222 2346666664
No 231
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.53 E-value=6.8e-08 Score=106.48 Aligned_cols=121 Identities=22% Similarity=0.234 Sum_probs=78.5
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHH----HcCCCcEEecCCCCCCC-CCCCCcceEE
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVAL----ERGFPAVVSPLGNRRLP-FPSGVFDAIH 377 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~----eRGL~~i~~~~dt~~LP-FpD~SFDlVh 377 (689)
...+|||+|||+|..+..|+. ..|+++|+++. +++.+. ..|+...+...|...++ +.+++||+|+
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~-----~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGK-----RVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHH-----HHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEE
Confidence 357899999999998877763 24899998864 444433 34776445555655555 3468999999
Q ss_pred e----cccc-c--------ccccc--------HHHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhc-ceeEE
Q 044932 378 C----DGCS-I--------TWHAH--------GGKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASI-CWNIL 433 (689)
Q Consensus 378 c----s~cl-i--------~W~~d--------~~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l-~W~~v 433 (689)
+ +... + .|..+ ...+|.++.++|||||+|++++-.-.. +....+..+++.. .|+++
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~ 254 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLE 254 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEE
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCCcEEE
Confidence 4 2111 1 11111 156899999999999999998644222 2334566677665 46554
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.51 E-value=3e-07 Score=99.07 Aligned_cols=99 Identities=21% Similarity=0.138 Sum_probs=65.8
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHH----HcCCCcEEecCCCCC-CCCCCCCcceEEeccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVAL----ERGFPAVVSPLGNRR-LPFPSGVFDAIHCDGC 381 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~----eRGL~~i~~~~dt~~-LPFpD~SFDlVhcs~c 381 (689)
..+|||+|||+|.++..++.. .|+++|+++. +++.|. ..|+...+...|... ++...+.||+|++..-
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~-----al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLE-----ALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHH-----HHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHH-----HHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 578999999999999888754 4899999874 444443 346665444555433 2222344999997421
Q ss_pred ccc--------ccccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 382 SIT--------WHAHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 382 li~--------W~~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
.+. ...+...++.++.|+|+|||+|++.+-.
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 100 1123357888999999999999976544
No 233
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.50 E-value=6e-07 Score=93.91 Aligned_cols=93 Identities=10% Similarity=-0.010 Sum_probs=63.9
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCCCCCCCCCcceEEecccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRRLPFPSGVFDAIHCDGCSIT 384 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~ 384 (689)
..+|||+|||+|.|+.. +.. .|+++|+++... ..+.+.+...++. ..+...|...++ ++||+|++..-.
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai-~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAI-ELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-- 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--
Confidence 57899999999999988 753 489999987422 1222233334652 344555555443 799999975211
Q ss_pred ccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 385 WHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 385 W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
....++.++.++|+|||++++.+.
T Consensus 269 ---~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 269 ---FAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp ---TGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ---hHHHHHHHHHHHcCCCCEEEEEEe
Confidence 123789999999999999988753
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.50 E-value=1.4e-07 Score=96.52 Aligned_cols=92 Identities=22% Similarity=0.217 Sum_probs=61.2
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc----CC--CcEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER----GF--PAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR----GL--~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..|+.. .|+++|+++ .|++.|.++ ++ ...+...|...++++ +||+|++.
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~n 100 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDP-----RLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVAN 100 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCH-----HHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEE
T ss_pred CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCH-----HHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEe
Confidence 3578999999999999888753 599999886 466666554 22 234455666777776 79999985
Q ss_pred cccccccccHH-HHH--------------HHH--HhccCCCcEEE
Q 044932 380 GCSITWHAHGG-KLL--------------LEM--NRILRPSGYFI 407 (689)
Q Consensus 380 ~cli~W~~d~~-~aL--------------~EI--~RVLRPGG~fV 407 (689)
. -++|..... .+| .|+ +|+|+|||.++
T Consensus 101 l-py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 101 L-PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp C-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred c-CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 3 223322111 111 355 47999999874
No 235
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.46 E-value=1.3e-07 Score=96.42 Aligned_cols=97 Identities=20% Similarity=0.235 Sum_probs=65.4
Q ss_pred CCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHc-----CC----------CcEEecCCCCC-CCC
Q 044932 308 NIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALER-----GF----------PAVVSPLGNRR-LPF 368 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eR-----GL----------~~i~~~~dt~~-LPF 368 (689)
...+|||||||+|.++..++.. .|+++|+++ .+++.|+++ ++ ...+...|+.. ++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~-----~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDE-----DVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCH-----HHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCH-----HHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc
Confidence 3579999999999999888765 489999886 456666554 21 12233344322 223
Q ss_pred CCCCcceEEeccccccccc--c--HHHHHHHHHhccCCCcEEEEEcC
Q 044932 369 PSGVFDAIHCDGCSITWHA--H--GGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 369 pD~SFDlVhcs~cli~W~~--d--~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+++||+|++.... ++.. . ...++.++.|+|+|||+|++...
T Consensus 150 -~~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 150 -NRGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp -CCCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cCCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 5799999975321 2211 1 25789999999999999999753
No 236
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.44 E-value=8.8e-07 Score=91.93 Aligned_cols=117 Identities=8% Similarity=0.015 Sum_probs=80.8
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||||||+|-|+..++.. .|+++||++. |++++.+ .|+...+.+.|...-+ +...||+|++.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~-----~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~l 205 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDAR-----LVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLL 205 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHH-----HHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEET
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHH-----HHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHH
Confidence 4679999999999998777543 5999999864 5555444 3787777776654434 45899999876
Q ss_pred ccccccccc--HHHHHHHHHhccCCCcEEEEEcCC-------Cchh-HHHHHHHHHHhcceeE
Q 044932 380 GCSITWHAH--GGKLLLEMNRILRPSGYFILSTKH-------DSIE-EEEALTTLTASICWNI 432 (689)
Q Consensus 380 ~cli~W~~d--~~~aL~EI~RVLRPGG~fVIsdp~-------~~le-~~~~ie~La~~l~W~~ 432 (689)
- .+|..++ .+..+ ++...|+|+|.||-.+.. .+.. ....++..+..-+|..
T Consensus 206 k-ti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 206 K-TLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp T-CHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCE
T ss_pred H-HHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCce
Confidence 4 3443322 23445 999999999999988762 1221 2245778888788843
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.44 E-value=3.4e-07 Score=101.00 Aligned_cols=115 Identities=21% Similarity=0.256 Sum_probs=73.9
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHH----cCCCc-EEecCCCCCCCC-CCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALE----RGFPA-VVSPLGNRRLPF-PSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~e----RGL~~-i~~~~dt~~LPF-pD~SFDlVh 377 (689)
..+|||+|||+|..+..|+. ..|+++|+++. +++.+.+ .|+.. .+...|...++. .+++||+|+
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~-----~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il 192 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSAS-----RVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAIL 192 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHH-----HHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEE
Confidence 46899999999998877764 24899998864 4444433 36643 345566666653 458999999
Q ss_pred e----ccc-cc--------ccccc--------HHHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhc
Q 044932 378 C----DGC-SI--------TWHAH--------GGKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASI 428 (689)
Q Consensus 378 c----s~c-li--------~W~~d--------~~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l 428 (689)
| +.. .+ +|... ...+|.++.|+|||||+|++++-.-.. +....+..+++..
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~ 265 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETY 265 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHS
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHC
Confidence 6 211 11 12111 136789999999999999998743222 2223455555554
No 238
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.43 E-value=1.1e-06 Score=90.93 Aligned_cols=145 Identities=9% Similarity=0.062 Sum_probs=91.8
Q ss_pred eecCCCCcccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhc---CCeEEEEcCCcccHHHHHHHHHHc
Q 044932 276 LTFPQNQSEFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLA---KEVLTLTVGLKDDLVDLAQVALER 352 (689)
Q Consensus 276 ~~Fpgggt~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~---~~V~gmDIsp~D~seamlq~A~eR 352 (689)
+.|.-..++|..+...-...|.+++. .+.+|||+|||+|.|+..++. ..|+++|++|... +.+.+-+...
T Consensus 99 ~~~D~~k~~f~~~~~~er~ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~-~~~~~N~~~N 171 (278)
T 3k6r_A 99 YKLDVAKIMFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-KFLVENIHLN 171 (278)
T ss_dssp EEEETTTSCCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHH-HHHHHHHHHT
T ss_pred EEEeccceEEcCCcHHHHHHHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHH-HHHHHHHHHc
Confidence 34444456777776644455555542 357999999999999876653 3599999988422 2233334445
Q ss_pred CCCc--EEecCCCCCCCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC--CCch--hHHHHHHHHHH
Q 044932 353 GFPA--VVSPLGNRRLPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK--HDSI--EEEEALTTLTA 426 (689)
Q Consensus 353 GL~~--i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp--~~~l--e~~~~ie~La~ 426 (689)
|+.. .+...|+..++. .+.||.|++.. .+ ....+|....++|||||++.+-.. .... ...+.++.++.
T Consensus 172 ~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~--p~---~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~ 245 (278)
T 3k6r_A 172 KVEDRMSAYNMDNRDFPG-ENIADRILMGY--VV---RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITK 245 (278)
T ss_dssp TCTTTEEEECSCTTTCCC-CSCEEEEEECC--CS---SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHH
T ss_pred CCCCcEEEEeCcHHHhcc-ccCCCEEEECC--CC---cHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHH
Confidence 6654 344566666654 47899998642 11 233678888899999999876432 1111 12345778888
Q ss_pred hcceeEE
Q 044932 427 SICWNIL 433 (689)
Q Consensus 427 ~l~W~~v 433 (689)
..++...
T Consensus 246 ~~g~~v~ 252 (278)
T 3k6r_A 246 EYGYDVE 252 (278)
T ss_dssp HTTCEEE
T ss_pred HcCCcEE
Confidence 8888763
No 239
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.43 E-value=5.2e-07 Score=93.85 Aligned_cols=110 Identities=13% Similarity=0.025 Sum_probs=71.4
Q ss_pred CCCeEEEECC------ccch-hHHHhhc--CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGS------ADLS-FVASLLA--KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGC------GtGs-faa~La~--~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||+|| |+|+ .++.+.. ..|+++|+++. + .++... ...|...++++ ++||+|+|
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~------v-----~~v~~~-i~gD~~~~~~~-~~fD~Vvs 129 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF------V-----SDADST-LIGDCATVHTA-NKWDLIIS 129 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC------B-----CSSSEE-EESCGGGCCCS-SCEEEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC------C-----CCCEEE-EECccccCCcc-CcccEEEE
Confidence 3578999999 4565 2333433 35999999984 1 234330 44566677776 78999998
Q ss_pred cccccccc-----------ccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEE
Q 044932 379 DGCSITWH-----------AHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNIL 433 (689)
Q Consensus 379 s~cli~W~-----------~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v 433 (689)
... .++. .....+|.++.|+|||||.|++........ ..+..+++..+|..+
T Consensus 130 n~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~~~l~~~GF~~v 192 (290)
T 2xyq_A 130 DMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGHFSWWTA 192 (290)
T ss_dssp CCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTTEEEEEE
T ss_pred cCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHHHHHHHcCCcEE
Confidence 521 1110 012478999999999999999976432211 246677888877654
No 240
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.42 E-value=2.8e-07 Score=105.99 Aligned_cols=115 Identities=16% Similarity=0.079 Sum_probs=75.6
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHH----cCCC---cEEecCCCCC-CCCCCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALE----RGFP---AVVSPLGNRR-LPFPSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~e----RGL~---~i~~~~dt~~-LPFpD~SFDlVh 377 (689)
..+|||+|||+|.|+.+++.. .|+++|+++. +++.|.+ .|+. ..+...|... ++...++||+|+
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~-----al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii 614 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRT-----YLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIF 614 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHH-----HHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHH-----HHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEE
Confidence 468999999999999877643 3999999874 4444443 4664 3444555433 444568999999
Q ss_pred eccc----------cccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhccee
Q 044932 378 CDGC----------SITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWN 431 (689)
Q Consensus 378 cs~c----------li~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~ 431 (689)
+.-- ......+...++.++.++|+|||+|+++........ -.+.+...+++
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~---~~~~l~~~g~~ 675 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM---DLDGLAKLGLK 675 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCC---CHHHHHHTTEE
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccccc---CHHHHHHcCCc
Confidence 8421 112123445788999999999999999886632211 12345556665
No 241
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.42 E-value=4.5e-07 Score=96.56 Aligned_cols=121 Identities=13% Similarity=0.012 Sum_probs=75.4
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCC-C--cEEecCCCCCC-C-C--CCCCcceEEe
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGF-P--AVVSPLGNRRL-P-F--PSGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL-~--~i~~~~dt~~L-P-F--pD~SFDlVhc 378 (689)
..+|||+|||+|.|+..++.. .|+++|+++... ..+.+.+...|+ . ..+...|...+ + + ...+||+|++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al-~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEAL-DIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 468999999999999888754 489999987422 122222333466 3 34444554332 1 1 1468999998
Q ss_pred ccc--------cccccccHHHHHHHHHhccCCCcEEEEEcCCCchh--H-HHHHHHHHHhcce
Q 044932 379 DGC--------SITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIE--E-EEALTTLTASICW 430 (689)
Q Consensus 379 s~c--------li~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le--~-~~~ie~La~~l~W 430 (689)
.-- ..........++.++.++|+|||+++++..+.... . ...+...+...++
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 421 11111344578999999999999999987654332 1 2334445555553
No 242
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.41 E-value=1.5e-07 Score=100.10 Aligned_cols=104 Identities=11% Similarity=-0.035 Sum_probs=68.0
Q ss_pred CCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCCC--cEEecCCCCCC-CC---CCCCcceEEec
Q 044932 309 IRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGFP--AVVSPLGNRRL-PF---PSGVFDAIHCD 379 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL~--~i~~~~dt~~L-PF---pD~SFDlVhcs 379 (689)
..+|||+|||+|.++..++.. .|+++|+++... ..+.+.+...|+. ..+...+...+ +. .+.+||+|++.
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l-~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAI-ETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 478999999999999888754 599999987422 1222223334663 33444554332 21 25799999984
Q ss_pred ccc--------ccccccHHHHHHHHHhccCCCcEEEEEcCCC
Q 044932 380 GCS--------ITWHAHGGKLLLEMNRILRPSGYFILSTKHD 413 (689)
Q Consensus 380 ~cl--------i~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~ 413 (689)
.-. ..+..+...++.++.++|+|||+++++....
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 211 1111334578899999999999999887553
No 243
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.39 E-value=1.4e-07 Score=100.23 Aligned_cols=120 Identities=14% Similarity=0.057 Sum_probs=73.5
Q ss_pred CCeEEEECCccchhHHHhhc--CCeEEEEcCCcccHHHHHHHHHHcCCC-cEEecCCCCCC-CC---CCCCcceEEeccc
Q 044932 309 IRVVLEIGSADLSFVASLLA--KEVLTLTVGLKDDLVDLAQVALERGFP-AVVSPLGNRRL-PF---PSGVFDAIHCDGC 381 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~--~~V~gmDIsp~D~seamlq~A~eRGL~-~i~~~~dt~~L-PF---pD~SFDlVhcs~c 381 (689)
..+|||+|||+|.++..++. ..|+++|+++... ..+.+.+...|+. ..+...+...+ +. .+.+||+|++.--
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~-~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEAL-RRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHH-HHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHH-HHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 36899999999999887775 3689999987422 1222223334665 33444454332 11 2579999998421
Q ss_pred c--------ccccccHHHHHHHHHhccCCCcEEEEEcCCCchhH---HHHHHHHHHhcc
Q 044932 382 S--------ITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEE---EEALTTLTASIC 429 (689)
Q Consensus 382 l--------i~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~---~~~ie~La~~l~ 429 (689)
. ..+......++.++.++|+|||+|+++........ ...+.+.+...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g 347 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAH 347 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcC
Confidence 1 11112345788999999999999999976543322 233444444444
No 244
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.38 E-value=1.9e-06 Score=88.39 Aligned_cols=132 Identities=10% Similarity=-0.054 Sum_probs=84.5
Q ss_pred CCCeEEEECCccchhHHHhhc-CCeEEEEcCCcccHHHHHHHHHH----cCCCcEEecCCCCCCCCCCCCcceEEecccc
Q 044932 308 NIRVVLEIGSADLSFVASLLA-KEVLTLTVGLKDDLVDLAQVALE----RGFPAVVSPLGNRRLPFPSGVFDAIHCDGCS 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-~~V~gmDIsp~D~seamlq~A~e----RGL~~i~~~~dt~~LPFpD~SFDlVhcs~cl 382 (689)
...+|||||||+|-|+..+.. ..++++||++. |++++.+ .|.+..+.+.|....|++ .+||+|+..-.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~-----~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~- 177 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYERGIASVWGCDIHQG-----LGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKL- 177 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHTTCSEEEEEESBHH-----HHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESC-
T ss_pred CCCeEEEecCCccHHHHHhccCCeEEEEeCCHH-----HHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHH-
Confidence 578999999999999987663 46999999874 4444443 376666777777777777 59999987532
Q ss_pred cccc--ccHHHHHHHHHhccCCCcEEEEEcCCC-------chh-HHHHHHHHHHhcceeEEEeeccccCceeEEEEEe
Q 044932 383 ITWH--AHGGKLLLEMNRILRPSGYFILSTKHD-------SIE-EEEALTTLTASICWNILAHKTDEISEMGVKIYQK 450 (689)
Q Consensus 383 i~W~--~d~~~aL~EI~RVLRPGG~fVIsdp~~-------~le-~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqK 450 (689)
+|.. ...+..+ .+...|+|+|.||-..... +.. ....++..+..-.|.+-. .+++.+-+.+-+|
T Consensus 178 lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~---~~~~nEl~~~i~~ 251 (253)
T 3frh_A 178 LPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDK---KTIGTELIYLIKK 251 (253)
T ss_dssp HHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEE---EEETTEEEEEEEE
T ss_pred HHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhh---eecCceEEEEEec
Confidence 3322 2334444 8888999998887776321 111 123466777766665432 2344444444444
No 245
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.37 E-value=3.2e-07 Score=100.92 Aligned_cols=125 Identities=24% Similarity=0.245 Sum_probs=78.4
Q ss_pred CCCeEEEECCccchhHHHhhcC-----CeEEEEcCCcccHHHHHHHHHHcCCCcE-EecCCCCCCC-CCCCCcceEEecc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK-----EVLTLTVGLKDDLVDLAQVALERGFPAV-VSPLGNRRLP-FPSGVFDAIHCDG 380 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~-----~V~gmDIsp~D~seamlq~A~eRGL~~i-~~~~dt~~LP-FpD~SFDlVhcs~ 380 (689)
...+|||+|||+|..+..|+.. .|+++|+++... ....+.+...|+..+ +...|...++ +.+++||+|++.-
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl-~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRA-KILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHH-HHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 3578999999999987776632 489999987422 122222333476543 3445555544 3358999998621
Q ss_pred -c---c-c--------cccccH--------HHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhcceeEE
Q 044932 381 -C---S-I--------TWHAHG--------GKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASICWNIL 433 (689)
Q Consensus 381 -c---l-i--------~W~~d~--------~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l~W~~v 433 (689)
| . + .|..+. ..+|.++.++|||||+|++++-.-.. +....+..+++...|+++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~l~ 258 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVTIE 258 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEE
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCEEE
Confidence 1 1 1 111111 26789999999999999998743222 334557788888776554
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.35 E-value=2.1e-06 Score=90.58 Aligned_cols=114 Identities=17% Similarity=0.084 Sum_probs=73.6
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecc--c
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDG--C 381 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~--c 381 (689)
..+|||+|||+|.|+..++. ..|+|+|+++... +.| . ...+...|....+ +++.||+|++.- .
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~-----~~a--~--~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL-----DLP--P--WAEGILADFLLWE-PGEAFDLILGNPPYG 109 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC-----CCC--T--TEEEEESCGGGCC-CSSCEEEEEECCCCC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH-----HhC--C--CCcEEeCChhhcC-ccCCCCEEEECcCcc
Confidence 45899999999999887764 3599999998533 223 1 2334444544443 347999999841 1
Q ss_pred cccc-------c-cc------------------HHHHHHHHHhccCCCcEEEEEcCCCchh--HHHHHHHHHHhcceeE
Q 044932 382 SITW-------H-AH------------------GGKLLLEMNRILRPSGYFILSTKHDSIE--EEEALTTLTASICWNI 432 (689)
Q Consensus 382 li~W-------~-~d------------------~~~aL~EI~RVLRPGG~fVIsdp~~~le--~~~~ie~La~~l~W~~ 432 (689)
.... . .+ ...+|..+.++|+|||++++..+...+. ....+.+.+...++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~~~ 188 (421)
T 2ih2_A 110 IVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTS 188 (421)
T ss_dssp CBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSEEE
T ss_pred CcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCCeE
Confidence 0000 0 00 1156888999999999999998875431 2245677766667733
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.35 E-value=7.2e-06 Score=88.72 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=79.1
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHH----HcCCC-cEEecCC
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVAL----ERGFP-AVVSPLG 362 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~----eRGL~-~i~~~~d 362 (689)
...++.+.+.+. +. ...+|||+|||+|.++..|+.. .|+++|+++. +++.|. ..++. ..+...+
T Consensus 272 e~l~~~~~~~l~-~~---~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~-----al~~A~~n~~~~~~~~v~f~~~d 342 (433)
T 1uwv_A 272 QKMVARALEWLD-VQ---PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPA-----LVEKGQQNARLNGLQNVTFYHEN 342 (433)
T ss_dssp HHHHHHHHHHHT-CC---TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHH-----HHHHHHHHHHHTTCCSEEEEECC
T ss_pred HHHHHHHHHhhc-CC---CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHH-----HHHHHHHHHHHcCCCceEEEECC
Confidence 344455555443 11 3468999999999999998865 5999999874 444443 34654 3344455
Q ss_pred CCC----CCCCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEE
Q 044932 363 NRR----LPFPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILA 434 (689)
Q Consensus 363 t~~----LPFpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~ 434 (689)
... +|+++++||+|++.- +...- ..++..+. -++|++.++++..+..+.. .+.. +...+|....
T Consensus 343 ~~~~l~~~~~~~~~fD~Vv~dP---Pr~g~-~~~~~~l~-~~~p~~ivyvsc~p~tlar--d~~~-l~~~Gy~~~~ 410 (433)
T 1uwv_A 343 LEEDVTKQPWAKNGFDKVLLDP---ARAGA-AGVMQQII-KLEPIRIVYVSCNPATLAR--DSEA-LLKAGYTIAR 410 (433)
T ss_dssp TTSCCSSSGGGTTCCSEEEECC---CTTCC-HHHHHHHH-HHCCSEEEEEESCHHHHHH--HHHH-HHHTTCEEEE
T ss_pred HHHHhhhhhhhcCCCCEEEECC---CCccH-HHHHHHHH-hcCCCeEEEEECChHHHHh--hHHH-HHHCCcEEEE
Confidence 443 567788999999742 11111 13444444 3799999999987654432 1333 3344776643
No 248
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.30 E-value=5.7e-06 Score=89.62 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=84.0
Q ss_pred CCeEEEECCccchhHHHhh-----------------cCCeEEEEcCCcccHHHHHHHHHH----cCC---CcEEecCCCC
Q 044932 309 IRVVLEIGSADLSFVASLL-----------------AKEVLTLTVGLKDDLVDLAQVALE----RGF---PAVVSPLGNR 364 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La-----------------~~~V~gmDIsp~D~seamlq~A~e----RGL---~~i~~~~dt~ 364 (689)
..+|||.|||+|.|...++ ...++|+|+++. ++..|+. +|+ ...+...|+.
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~-----~~~lA~~nl~l~g~~~~~~~i~~gD~l 246 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPL-----VVTLASMNLYLHGIGTDRSPIVCEDSL 246 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHH-----HHHHHHHHHHHTTCCSSCCSEEECCTT
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHH-----HHHHHHHHHHHhCCCcCCCCEeeCCCC
Confidence 4689999999999876544 246999999874 3444332 465 3345556665
Q ss_pred CCCCCCCCcceEEecc--cccccccc--------------HHHHHHHHHhccCCCcEEEEEcCCCchh---HHHHHHH-H
Q 044932 365 RLPFPSGVFDAIHCDG--CSITWHAH--------------GGKLLLEMNRILRPSGYFILSTKHDSIE---EEEALTT-L 424 (689)
Q Consensus 365 ~LPFpD~SFDlVhcs~--cli~W~~d--------------~~~aL~EI~RVLRPGG~fVIsdp~~~le---~~~~ie~-L 424 (689)
..+.. ..||+|++.- ....+... ...+|..+.++|+|||++++..|...+. ....+.+ +
T Consensus 247 ~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L 325 (445)
T 2okc_A 247 EKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRL 325 (445)
T ss_dssp TSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHH
T ss_pred CCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHH
Confidence 55554 4899999852 11111110 1368999999999999999998765432 2234554 5
Q ss_pred HHhcceeEEEee-cccc----CceeEEEEEeC
Q 044932 425 TASICWNILAHK-TDEI----SEMGVKIYQKP 451 (689)
Q Consensus 425 a~~l~W~~v~~~-~~~~----g~~~i~IwqKp 451 (689)
++...+..+..- ...+ -...|++++|.
T Consensus 326 ~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~ 357 (445)
T 2okc_A 326 LQDFNLHTILRLPTGIFYAQGVKANVLFFSKG 357 (445)
T ss_dssp HHHEEEEEEEECCSSSSSSTTCCEEEEEEEES
T ss_pred HhcCcEEEEEeCCCCCccCCCCCEEEEEEECC
Confidence 666556554322 1112 12346666664
No 249
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.27 E-value=4e-06 Score=87.04 Aligned_cols=127 Identities=14% Similarity=0.070 Sum_probs=72.9
Q ss_pred ccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEe
Q 044932 284 EFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVS 359 (689)
Q Consensus 284 ~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~ 359 (689)
.|..++..-+..|.+. ..+. ...+|||+|||+|+|+.+.+.. .|.++++.- |.....+.. ...|...+..
T Consensus 54 ~YrSRaA~KL~ei~ek-~~l~---~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv-Dl~~~pi~~-~~~g~~ii~~ 127 (277)
T 3evf_A 54 VAVSRGTAKLRWFHER-GYVK---LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR-DGHEKPMNV-QSLGWNIITF 127 (277)
T ss_dssp BCSSTHHHHHHHHHHT-TSSC---CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTCCCCCCC-CBTTGGGEEE
T ss_pred CccccHHHHHHHHHHh-CCCC---CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec-cCccccccc-CcCCCCeEEE
Confidence 3445554334444443 2233 3468999999999999876654 366777762 211000000 0012222333
Q ss_pred cCCCCCCCCCCCCcceEEecc---ccccccccHH--HHHHHHHhccCCC-cEEEEEcCCCchh
Q 044932 360 PLGNRRLPFPSGVFDAIHCDG---CSITWHAHGG--KLLLEMNRILRPS-GYFILSTKHDSIE 416 (689)
Q Consensus 360 ~~dt~~LPFpD~SFDlVhcs~---cli~W~~d~~--~aL~EI~RVLRPG-G~fVIsdp~~~le 416 (689)
..++.-..|+...||+|+|.. .-++|.+... .+|..+.++|+|| |.|++..-.++-.
T Consensus 128 ~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~ 190 (277)
T 3evf_A 128 KDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMP 190 (277)
T ss_dssp ECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSH
T ss_pred eccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCc
Confidence 333344567788999999854 2233443322 3468889999999 9999987664333
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.25 E-value=3.1e-06 Score=91.94 Aligned_cols=99 Identities=13% Similarity=0.045 Sum_probs=63.9
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccccccc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWH 386 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~ 386 (689)
..+|||+|||+|.|+..|+.. .|+++|+++... ..+.+.+...|+...+...+...++ + .+||+|++..-. .
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai-~~A~~n~~~ngl~v~~~~~d~~~~~-~-~~fD~Vv~dPPr---~ 364 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAI-EMARRNVEINNVDAEFEVASDREVS-V-KGFDTVIVDPPR---A 364 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHTCCEEEEECCTTTCC-C-TTCSEEEECCCT---T
T ss_pred CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHH-HHHHHHHHHcCCcEEEEECChHHcC-c-cCCCEEEEcCCc---c
Confidence 468999999999999988864 599999987422 1122223334665445556665553 2 289999974211 1
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEcCCCc
Q 044932 387 AHGGKLLLEMNRILRPSGYFILSTKHDS 414 (689)
Q Consensus 387 ~d~~~aL~EI~RVLRPGG~fVIsdp~~~ 414 (689)
.....++..+ +.|+|||+++++..+..
T Consensus 365 g~~~~~~~~l-~~l~p~givyvsc~p~t 391 (425)
T 2jjq_A 365 GLHPRLVKRL-NREKPGVIVYVSCNPET 391 (425)
T ss_dssp CSCHHHHHHH-HHHCCSEEEEEESCHHH
T ss_pred chHHHHHHHH-HhcCCCcEEEEECChHH
Confidence 1112344444 56999999999986643
No 251
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.20 E-value=4e-06 Score=86.44 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=44.5
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH----cCCC-cEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE----RGFP-AVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e----RGL~-~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||+|||+|.++..|+.. .|+++|+++. +++.|.+ .++. ..+...|...++++ +||+|+|.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~-----~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n 113 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSR-----MISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTAN 113 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHH-----HHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEE
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHH-----HHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEc
Confidence 3578999999999999999875 5899998863 4555444 3443 23445566666665 89999985
No 252
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.16 E-value=2.6e-06 Score=91.57 Aligned_cols=102 Identities=13% Similarity=0.106 Sum_probs=63.1
Q ss_pred CCeEEEECCccchhHHHhh-------------------cCCeEEEEcCCcccHHHHHHHHH----------Hc----CCC
Q 044932 309 IRVVLEIGSADLSFVASLL-------------------AKEVLTLTVGLKDDLVDLAQVAL----------ER----GFP 355 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La-------------------~~~V~gmDIsp~D~seamlq~A~----------eR----GL~ 355 (689)
.-+|+|+|||+|..+..++ +..|..-|+...|...-...... .+ +..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999998765542 11366678777665311111110 00 001
Q ss_pred cEEecCCC-CCCCCCCCCcceEEeccccccccc--------------------------------------cHHHHHHHH
Q 044932 356 AVVSPLGN-RRLPFPSGVFDAIHCDGCSITWHA--------------------------------------HGGKLLLEM 396 (689)
Q Consensus 356 ~i~~~~dt-~~LPFpD~SFDlVhcs~cli~W~~--------------------------------------d~~~aL~EI 396 (689)
...++.++ ..-.||++|||+||++.+ +||.. |...+|...
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222 122489999999998754 58975 233468889
Q ss_pred HhccCCCcEEEEEcC
Q 044932 397 NRILRPSGYFILSTK 411 (689)
Q Consensus 397 ~RVLRPGG~fVIsdp 411 (689)
.|.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999853
No 253
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.14 E-value=1.2e-06 Score=87.58 Aligned_cols=76 Identities=16% Similarity=0.241 Sum_probs=51.1
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC--C-CcEEecCCCCCC
Q 044932 292 YLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG--F-PAVVSPLGNRRL 366 (689)
Q Consensus 292 Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG--L-~~i~~~~dt~~L 366 (689)
+++.|.+.+. +. ...+|||+|||+|.++..|+.. .|+++|+++ .+++.|.++- . ...+...|...+
T Consensus 18 ~~~~i~~~~~-~~---~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 18 NIDKIMTNIR-LN---EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDH-----KLCKTTENKLVDHDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHTTCC-CC---TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCH-----HHHHHHHHHTTTCCSEEEECCCGGGC
T ss_pred HHHHHHHhCC-CC---CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCH-----HHHHHHHHhhccCCCeEEEEChHHhC
Confidence 3455555443 11 3578999999999999888764 589999875 5667776642 1 234556777888
Q ss_pred CCCC-CCcceE
Q 044932 367 PFPS-GVFDAI 376 (689)
Q Consensus 367 PFpD-~SFDlV 376 (689)
++++ ..|++|
T Consensus 89 ~~~~~~~~~vv 99 (244)
T 1qam_A 89 KFPKNQSYKIF 99 (244)
T ss_dssp CCCSSCCCEEE
T ss_pred CcccCCCeEEE
Confidence 8874 456433
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.04 E-value=2e-07 Score=92.52 Aligned_cols=97 Identities=14% Similarity=0.076 Sum_probs=61.0
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc--CC-CcEEecCCCCCCCCCC-CCcceEEeccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER--GF-PAVVSPLGNRRLPFPS-GVFDAIHCDGC 381 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR--GL-~~i~~~~dt~~LPFpD-~SFDlVhcs~c 381 (689)
...+|||+|||+|.++..|+.. .|+++|+++.. ++.|.++ +. ...+...|...+++++ ++| .|++..-
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~-----~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~P 102 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHL-----FNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIP 102 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSS-----SSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHH-----HHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCC
Confidence 3468999999999998888754 58999998853 3333332 11 2345566778888874 789 5555310
Q ss_pred -----------cccccccHHHHH----HHHHhccCCCcEEEEEcC
Q 044932 382 -----------SITWHAHGGKLL----LEMNRILRPSGYFILSTK 411 (689)
Q Consensus 382 -----------li~W~~d~~~aL----~EI~RVLRPGG~fVIsdp 411 (689)
..| ......+| ..+.|+|+|||.|++...
T Consensus 103 y~~~~~~~~~~~~~-~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 103 YHLSTQIIKKVVFE-SRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp SSSCHHHHHHHHHH-CCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred ccccHHHHHHHHhC-CCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 001 11222334 558899999987765443
No 255
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.86 E-value=9.2e-05 Score=78.28 Aligned_cols=94 Identities=11% Similarity=0.083 Sum_probs=58.1
Q ss_pred CeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcCCCc-EEecCCCCCC-C-CCC--------------
Q 044932 310 RVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERGFPA-VVSPLGNRRL-P-FPS-------------- 370 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRGL~~-i~~~~dt~~L-P-FpD-------------- 370 (689)
.+|||+|||+|.|+..|+.. .|+++|+++... ..+.+.+...|+.. .+...++..+ + +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai-~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSV-AAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHH-HHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHH-HHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 57999999999999988864 599999987422 12222333446643 3444444332 1 221
Q ss_pred CCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 371 GVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 371 ~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
.+||+|++.- +. ..+..++.++|+|+|.+++..-
T Consensus 294 ~~fD~Vv~dP---Pr----~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 294 YQCETIFVDP---PR----SGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp CCEEEEEECC---CT----TCCCHHHHHHHTTSSEEEEEES
T ss_pred CCCCEEEECc---Cc----cccHHHHHHHHhCCCEEEEEEC
Confidence 3899998641 10 0134567777888887777653
No 256
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.85 E-value=1.5e-05 Score=86.09 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=61.4
Q ss_pred CCeEEEECCccchhHHHhhcC---------------------CeEEEEcCCcccH------HHHHHHHH-HcC--CCcEE
Q 044932 309 IRVVLEIGSADLSFVASLLAK---------------------EVLTLTVGLKDDL------VDLAQVAL-ERG--FPAVV 358 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~---------------------~V~gmDIsp~D~s------eamlq~A~-eRG--L~~i~ 358 (689)
.-+|+|+||++|..+..++.. .|..-|+...|.. +.+.+.+. +.| .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999876544321 2455566555542 11222222 223 22222
Q ss_pred --ecCCC-CCCCCCCCCcceEEeccccccccccHHHH---------------------------------------HHHH
Q 044932 359 --SPLGN-RRLPFPSGVFDAIHCDGCSITWHAHGGKL---------------------------------------LLEM 396 (689)
Q Consensus 359 --~~~dt-~~LPFpD~SFDlVhcs~cli~W~~d~~~a---------------------------------------L~EI 396 (689)
++.++ ..-.||++|||+||++.+ +||..+.... |.-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 234599999999998754 5897543211 4445
Q ss_pred HhccCCCcEEEEEcC
Q 044932 397 NRILRPSGYFILSTK 411 (689)
Q Consensus 397 ~RVLRPGG~fVIsdp 411 (689)
.|.|+|||.+++...
T Consensus 212 a~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 212 SEELISRGRMLLTFI 226 (384)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCeEEEEEe
Confidence 899999999999853
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.84 E-value=8.5e-05 Score=79.84 Aligned_cols=101 Identities=9% Similarity=0.075 Sum_probs=66.8
Q ss_pred CCCeEEEECCccchhHHHhh--cC----------------------------------------CeEEEEcCCcccHHHH
Q 044932 308 NIRVVLEIGSADLSFVASLL--AK----------------------------------------EVLTLTVGLKDDLVDL 345 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La--~~----------------------------------------~V~gmDIsp~D~seam 345 (689)
....|||.+||+|.|+...+ .. .|+|+|+++. |
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~-----a 268 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR-----M 268 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH-----H
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH-----H
Confidence 45789999999999864332 22 3999999874 4
Q ss_pred HHHHH----HcCCC--cEEecCCCCCCCCCCCCcceEEecc---ccccccccHHHHHHHHHhccCC--CcEEEEEcCCCc
Q 044932 346 AQVAL----ERGFP--AVVSPLGNRRLPFPSGVFDAIHCDG---CSITWHAHGGKLLLEMNRILRP--SGYFILSTKHDS 414 (689)
Q Consensus 346 lq~A~----eRGL~--~i~~~~dt~~LPFpD~SFDlVhcs~---cli~W~~d~~~aL~EI~RVLRP--GG~fVIsdp~~~ 414 (689)
++.|. ..|+. ..+...|...++.+ .+||+|+|.- -.+.-..+...++.++.++||+ ||.+++.++...
T Consensus 269 l~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 347 (384)
T 3ldg_A 269 VEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDTD 347 (384)
T ss_dssp HHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCTT
T ss_pred HHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCHH
Confidence 44444 34664 34556677778776 5999999852 1111012345667777778877 998888877543
No 258
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.84 E-value=0.0002 Score=76.67 Aligned_cols=283 Identities=17% Similarity=0.197 Sum_probs=141.9
Q ss_pred CeEEEECCccchhHHHhh-cCCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccccc-
Q 044932 310 RVVLEIGSADLSFVASLL-AKEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITWHA- 387 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La-~~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~~- 387 (689)
.+||+++-+.|.++..|. ...|+.+.= ...+. +....+|+..... .. +..+...||+|+.. ++=..
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~~~~----~~~~~-~~l~~~~~~~~~~--~~--~~~~~~~~d~v~~~---~Pk~k~ 114 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVERLET----SRAAF-RCLTASGLQARLA--LP--WEAAAGAYDLVVLA---LPAGRG 114 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEEEEC----BHHHH-HHHHHTTCCCEEC--CG--GGSCTTCEEEEEEE---CCGGGC
T ss_pred CcEEEecCCCCccccccCCCCceEEEeC----cHHHH-HHHHHcCCCcccc--CC--ccCCcCCCCEEEEE---CCcchh
Confidence 589999999998777776 445666632 11222 2233457765321 11 11234789998742 11001
Q ss_pred --cHHHHHHHHHhccCCCcEEEEEcCCC-chhHHHHHHHHHHhcceeEEEeeccccCceeEEEEEeCCCchhHhhhhCCC
Q 044932 388 --HGGKLLLEMNRILRPSGYFILSTKHD-SIEEEEALTTLTASICWNILAHKTDEISEMGVKIYQKPESNDIYELRRKKN 464 (689)
Q Consensus 388 --d~~~aL~EI~RVLRPGG~fVIsdp~~-~le~~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~~~~cy~~r~~~~ 464 (689)
.....|.++.+.|+|||.+++..... .++ .....+...+.|.....+.. ...+..|++. ...
T Consensus 115 ~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g~~--~~~~~~~~~~~~~~~~~~~~---~~r~~~~~~~----------~~~ 179 (381)
T 3dmg_A 115 TAYVQASLVAAARALRMGGRLYLAGDKNKGFE--RYFKEARALLGYGVVVRREG---PYRVALLEKE----------KEA 179 (381)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEGGGTHH--HHHHHHHHHHSCEEEEEEET---TEEEEEEECC----------SCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEEccHHHHH--HHHHHHHhhhcccccccccc---CcEEEEEEcc----------CCC
Confidence 23578889999999999999887542 222 22334444556654433321 1123333331 011
Q ss_pred CCCCCCCCCCCCccccccccccccCCccccccCCCCCCCCccccccCCCccCchhhhhhhhHHHHHHHHHhhhcccCCCC
Q 044932 465 PPLCKENENPDAAWYVPMKTCLHTIPSSIEQHGTEWPEEWPKRLETYPDWLNDKEKLSSDTRHWKAIVDRSYLTGLGIDW 544 (689)
Q Consensus 465 p~~C~~~~d~d~~Wy~~l~~Ci~~~p~~~~~~~~~~~~~wP~Rl~~~p~rl~~~e~f~~D~~~W~~~v~~~y~~~l~~~~ 544 (689)
| .....|. .....+. +.. -++...|. .-+.......+......+.+ ++. ...
T Consensus 180 p-------~~~~~w~-~~~~~~~---------g~~------~~~~~~pg-vFs~~~~d~~t~~ll~~l~~-~l~---~~~ 231 (381)
T 3dmg_A 180 P-------PLPSLWR-AFSARIL---------GAE------YTFHHLPG-VFSAGKVDPASLLLLEALQE-RLG---PEG 231 (381)
T ss_dssp C-------CCCCCCE-EEEEEET---------TEE------EEEEECTT-CTTTTSCCHHHHHHHHHHHH-HHC---TTT
T ss_pred C-------CCccccc-eeeEEec---------Cce------EEEEeCCC-ceeCCCCCHHHHHHHHHHHH-hhc---ccC
Confidence 1 1123343 2222111 100 01111111 11111122334444444432 211 001
Q ss_pred CCeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhh----hhcccc-chhhccccCCCCCCCccchhhcccccc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGL-VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGL-ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..-..|+|+++|.|.|+.+|..... .|+-++.. ..+.. +-..|+ +-+++.=+..+..-+.+||+|-++..|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~ 308 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPF 308 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCch
Confidence 1234799999999999999987653 34433321 22211 111222 222222222222223799999998887
Q ss_pred ccccCC-cCCccceeeeeccccccCcEEEEeCc
Q 044932 619 SRLKSR-CRQPVSIVVEMDRILRPGGWAIVRDK 650 (689)
Q Consensus 619 s~~~~~-c~~~~~illEmDRILRP~G~~iirD~ 650 (689)
...... -.....++-++-|+|+|||.++|--+
T Consensus 309 ~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 309 HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 643221 11124578899999999999999643
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.83 E-value=3.3e-05 Score=82.75 Aligned_cols=101 Identities=12% Similarity=0.046 Sum_probs=67.1
Q ss_pred CCCeEEEECCccchhHHHhhc------------------------------------------CCeEEEEcCCcccHHHH
Q 044932 308 NIRVVLEIGSADLSFVASLLA------------------------------------------KEVLTLTVGLKDDLVDL 345 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~------------------------------------------~~V~gmDIsp~D~seam 345 (689)
...+|||.+||+|.|+..++. ..|+|+|+++. +
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~-----a 269 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE-----S 269 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH-----H
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH-----H
Confidence 457899999999998654431 24899999874 4
Q ss_pred HHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEEecccccc-c--cccHHHHHHHHHhccCC--CcEEEEEcCCCc
Q 044932 346 AQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIHCDGCSIT-W--HAHGGKLLLEMNRILRP--SGYFILSTKHDS 414 (689)
Q Consensus 346 lq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~-W--~~d~~~aL~EI~RVLRP--GG~fVIsdp~~~ 414 (689)
++.|.+ .|+. ..+...|...++.+ .+||+|+|.--... . ..+...++.++.++||+ ||.+++.++...
T Consensus 270 i~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~~ 348 (385)
T 3ldu_A 270 IDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYED 348 (385)
T ss_dssp HHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCTT
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCHH
Confidence 444443 4664 34556677777776 59999998521110 0 12334677788888887 888888777543
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.83 E-value=3.7e-05 Score=79.99 Aligned_cols=67 Identities=15% Similarity=0.053 Sum_probs=49.8
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc--C-CCcEEecCCCCCCCCCCCCcceEEec
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER--G-FPAVVSPLGNRRLPFPSGVFDAIHCD 379 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR--G-L~~i~~~~dt~~LPFpD~SFDlVhcs 379 (689)
...+|||||||+|.++..|+.. .|+++|+++.. ++.+.++ + -...+...|...+++++.+||+|+++
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~l-----i~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~N 121 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSL-----EPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVAN 121 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGG-----HHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEE
T ss_pred CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHH-----HHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEe
Confidence 3568999999999999888753 59999999853 3333332 1 23345567778889998899999865
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.82 E-value=1.7e-05 Score=85.21 Aligned_cols=115 Identities=14% Similarity=0.095 Sum_probs=70.7
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcC-------C-----
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERG-------F----- 354 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRG-------L----- 354 (689)
..|.+.|... + +.. ...++|||||||+|.++..++.+ .|+++|+++ .+++.|++.- +
T Consensus 173 ~~YhE~l~~~-~-~~~-p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~-----~vie~Ar~~~~~l~~~~l~dp~~ 244 (364)
T 2qfm_A 173 LAYTRAIMGS-G-KED-YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQ-----MVIDGCKKYMRKTCGDVLDNLKG 244 (364)
T ss_dssp HHHHHHHTTT-T-CCC-CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCH-----HHHHHHHHHCCC----CCSSSEE
T ss_pred hHHHHHHhhh-h-hhC-CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCH-----HHHHHHHHHHHHhccccccccCC
Confidence 3576655432 2 111 25689999999999999887765 488888876 5677776641 1
Q ss_pred -CcEEecCCCCCC-C-C--CCCCcceEEeccccccccc-----cHHHHHHHH----HhccCCCcEEEEEcCC
Q 044932 355 -PAVVSPLGNRRL-P-F--PSGVFDAIHCDGCSITWHA-----HGGKLLLEM----NRILRPSGYFILSTKH 412 (689)
Q Consensus 355 -~~i~~~~dt~~L-P-F--pD~SFDlVhcs~cli~W~~-----d~~~aL~EI----~RVLRPGG~fVIsdp~ 412 (689)
...+...|+... . + .+++||+|++-...++... .-..++..+ .|+|+|||.+++....
T Consensus 245 ~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 245 DCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp TTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 122333443221 1 1 3578999987432212111 113556666 8999999999987644
No 262
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.78 E-value=6.9e-05 Score=80.65 Aligned_cols=98 Identities=9% Similarity=0.087 Sum_probs=65.4
Q ss_pred CCCeEEEECCccchhHHHhh--cC----------------------------------------CeEEEEcCCcccHHHH
Q 044932 308 NIRVVLEIGSADLSFVASLL--AK----------------------------------------EVLTLTVGLKDDLVDL 345 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La--~~----------------------------------------~V~gmDIsp~D~seam 345 (689)
....|||.+||+|.|+..++ .. .|+++|+++. |
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~-----a 275 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR-----L 275 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH-----H
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH-----H
Confidence 45789999999999864332 22 3999999874 4
Q ss_pred HHHHHH----cCCC--cEEecCCCCCCCCCCCCcceEEecccccccc------ccHHHHHHHHHhccCC--CcEEEEEcC
Q 044932 346 AQVALE----RGFP--AVVSPLGNRRLPFPSGVFDAIHCDGCSITWH------AHGGKLLLEMNRILRP--SGYFILSTK 411 (689)
Q Consensus 346 lq~A~e----RGL~--~i~~~~dt~~LPFpD~SFDlVhcs~cli~W~------~d~~~aL~EI~RVLRP--GG~fVIsdp 411 (689)
++.|.+ .|+. ..+...|...++++ .+||+|+|.- +|. .+...++.++.++||+ ||.+++.++
T Consensus 276 l~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NP---PYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 276 IEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANP---PYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECC---CCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECC---CCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 444443 4664 34556677778776 5999999862 222 1233456667777766 888888777
Q ss_pred CCc
Q 044932 412 HDS 414 (689)
Q Consensus 412 ~~~ 414 (689)
...
T Consensus 352 ~~~ 354 (393)
T 3k0b_A 352 YEL 354 (393)
T ss_dssp CTT
T ss_pred CHH
Confidence 543
No 263
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.73 E-value=0.00051 Score=73.22 Aligned_cols=96 Identities=13% Similarity=0.042 Sum_probs=57.8
Q ss_pred CeEEEECCccchhHHHhhcCCeEEEEcCCcccHHHHHH-HHHHcCCCcE-EecCCCCCCCCCCCCcceEEecccccc-cc
Q 044932 310 RVVLEIGSADLSFVASLLAKEVLTLTVGLKDDLVDLAQ-VALERGFPAV-VSPLGNRRLPFPSGVFDAIHCDGCSIT-WH 386 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~~~V~gmDIsp~D~seamlq-~A~eRGL~~i-~~~~dt~~LPFpD~SFDlVhcs~cli~-W~ 386 (689)
.+||.+|.+.|.++..|...+++.+.=+ -.+...++ -+...|+... +...++.. ..+ ..||+|+.. ++ -.
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~~~~~ds--~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~-~~~~~v~~~---lpk~~ 112 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKPYSIGDS--YISELATRENLRLNGIDESSVKFLDSTA-DYP-QQPGVVLIK---VPKTL 112 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCCEEEESC--HHHHHHHHHHHHHTTCCGGGSEEEETTS-CCC-SSCSEEEEE---CCSCH
T ss_pred CCEEEECCCCCHHHHhhccCCceEEEhH--HHHHHHHHHHHHHcCCCccceEeccccc-ccc-cCCCEEEEE---cCCCH
Confidence 4699999999999988887777766411 12222222 2333466432 21122211 233 689998742 11 01
Q ss_pred ccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 387 AHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 387 ~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
......|..+...|+||+.+++....
T Consensus 113 ~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 113 ALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp HHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 12346788899999999999887653
No 264
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.72 E-value=0.00017 Score=75.27 Aligned_cols=119 Identities=12% Similarity=0.017 Sum_probs=67.7
Q ss_pred CCCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCCc-EEecCCCCCCCCCC---CCcceEEe
Q 044932 308 NIRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFPA-VVSPLGNRRLPFPS---GVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~~-i~~~~dt~~LPFpD---~SFDlVhc 378 (689)
...+|||+|||+|+.+..|+. ..|+++|+++... ....+.+...|+.. .+...|...++..+ .+||.|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l-~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRL-ASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHH-HHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 356899999999998877664 2499999986422 11222223336643 34455555554332 57999996
Q ss_pred ----ccc-------ccccc----c-cH-------HHHHHHHHhccCCCcEEEEEcCCCch-hHHHHHHHHHHhc
Q 044932 379 ----DGC-------SITWH----A-HG-------GKLLLEMNRILRPSGYFILSTKHDSI-EEEEALTTLTASI 428 (689)
Q Consensus 379 ----s~c-------li~W~----~-d~-------~~aL~EI~RVLRPGG~fVIsdp~~~l-e~~~~ie~La~~l 428 (689)
+.. -+.|. . +. ..+|....++|+ ||+++.++-.-.. +....+..+++..
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQN 253 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTS
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhC
Confidence 211 11221 1 11 235777778887 9999987643222 2233456665543
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.65 E-value=4.7e-05 Score=85.12 Aligned_cols=139 Identities=9% Similarity=0.029 Sum_probs=81.4
Q ss_pred CCeEEEECCccchhHHHhhc----------------------CCeEEEEcCCcccHHHHHHHHHH----cCCC------c
Q 044932 309 IRVVLEIGSADLSFVASLLA----------------------KEVLTLTVGLKDDLVDLAQVALE----RGFP------A 356 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~----------------------~~V~gmDIsp~D~seamlq~A~e----RGL~------~ 356 (689)
..+|||.+||+|.|...++. ..++|+|+++. ++..|+. +|+. .
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~-----~~~lA~~nl~l~gi~~~~~~~~ 244 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPG-----TRRLALMNCLLHDIEGNLDHGG 244 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHH-----HHHHHHHHHHTTTCCCBGGGTB
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHH-----HHHHHHHHHHHhCCCccccccC
Confidence 46899999999998754432 25899999874 4444433 3554 2
Q ss_pred EEecCCCCCCC-CCCCCcceEEecc--cccccc-----------ccHHHHHHHHHhccCCCcEEEEEcCCCchh---HHH
Q 044932 357 VVSPLGNRRLP-FPSGVFDAIHCDG--CSITWH-----------AHGGKLLLEMNRILRPSGYFILSTKHDSIE---EEE 419 (689)
Q Consensus 357 i~~~~dt~~LP-FpD~SFDlVhcs~--cli~W~-----------~d~~~aL~EI~RVLRPGG~fVIsdp~~~le---~~~ 419 (689)
.+...|+...+ ++...||+|++.- ....+. .....+|..+.+.|+|||++++..|...+. ...
T Consensus 245 ~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~ 324 (541)
T 2ar0_A 245 AIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGT 324 (541)
T ss_dssp SEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHH
T ss_pred CeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHH
Confidence 34445553332 4567899999852 111110 012367889999999999999998876442 123
Q ss_pred HHHHH-HHhcceeEEEe-ecccc----CceeEEEEEeCC
Q 044932 420 ALTTL-TASICWNILAH-KTDEI----SEMGVKIYQKPE 452 (689)
Q Consensus 420 ~ie~L-a~~l~W~~v~~-~~~~~----g~~~i~IwqKp~ 452 (689)
.+.+. ++......+.. ....+ -...|++++|..
T Consensus 325 ~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~ 363 (541)
T 2ar0_A 325 DIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGT 363 (541)
T ss_dssp HHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEBC
T ss_pred HHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECCC
Confidence 45443 44332232222 22222 123577777753
No 266
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.65 E-value=3.1e-05 Score=83.00 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=61.5
Q ss_pred CCeEEEECCccchhHHHhhcC--------------------CeEEEEcCCcccHHHHHHHHHH-----cCCCcEEecCCC
Q 044932 309 IRVVLEIGSADLSFVASLLAK--------------------EVLTLTVGLKDDLVDLAQVALE-----RGFPAVVSPLGN 363 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--------------------~V~gmDIsp~D~seamlq~A~e-----RGL~~i~~~~dt 363 (689)
.-+|+|+||++|..+..++.. .|..-|+...|.. .+-..+. ++.....++.++
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFn--tlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFN--AIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHH--HHHTTTTTSCSCTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHH--HHHHhcchhcccCCCEEEEecchh
Confidence 457999999999765433321 2666788776653 2211110 011111222222
Q ss_pred -CCCCCCCCCcceEEeccccccccccH---------------------------------HHHHHHHHhccCCCcEEEEE
Q 044932 364 -RRLPFPSGVFDAIHCDGCSITWHAHG---------------------------------GKLLLEMNRILRPSGYFILS 409 (689)
Q Consensus 364 -~~LPFpD~SFDlVhcs~cli~W~~d~---------------------------------~~aL~EI~RVLRPGG~fVIs 409 (689)
..-.||++|||+||++.+ +||..+. ..+|.-..|.|+|||.+++.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SSSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 334699999999998754 5897431 12377889999999999998
Q ss_pred c
Q 044932 410 T 410 (689)
Q Consensus 410 d 410 (689)
.
T Consensus 209 ~ 209 (359)
T 1m6e_X 209 I 209 (359)
T ss_dssp E
T ss_pred E
Confidence 5
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.54 E-value=3.8e-05 Score=82.28 Aligned_cols=96 Identities=17% Similarity=0.068 Sum_probs=60.8
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc---------------CCC-cEEecCCCCCCC-
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER---------------GFP-AVVSPLGNRRLP- 367 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR---------------GL~-~i~~~~dt~~LP- 367 (689)
..+|||+|||+|.++..++.. .|+++|+++... ..+.+-+... |+. ..+...|...+.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av-~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAY-ELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHH-HHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 468999999999998776642 489999987422 1111222223 554 333344432221
Q ss_pred CCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 368 FPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 368 FpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
...+.||+|++.- . .....+|..+.+.|||||+++++.
T Consensus 127 ~~~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1135899998531 1 122478889999999999998874
No 268
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.54 E-value=0.00014 Score=73.81 Aligned_cols=64 Identities=14% Similarity=0.201 Sum_probs=45.2
Q ss_pred CCCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHcC---CCcEEecCCCCCCCCCC----CCcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALERG---FPAVVSPLGNRRLPFPS----GVFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eRG---L~~i~~~~dt~~LPFpD----~SFDlV 376 (689)
...+|||||||+|.++..|+.. .|+++|+++ .|++.+.++- -...+...|...++|++ ..||+|
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~-----~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~vv 101 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDR-----DLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLRVV 101 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCH-----HHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEEEE
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCH-----HHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeEEE
Confidence 3578999999999999999875 599999886 4666666541 23345556777777653 457733
No 269
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.52 E-value=5.3e-05 Score=71.22 Aligned_cols=95 Identities=18% Similarity=0.189 Sum_probs=64.3
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----cc---chhhccccCCCCCCCccchhhcccccccc
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----GL---VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----GL---ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
.|+|+++|.|.++..|...+- .+|+-++- +..+...-.+ |+ |-+++.=.+.++.-+.+||+|.+.++|..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 899999999999999987632 23444443 2333322222 33 22233223445545689999999998887
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+.+ ...+|-++-|+|+|||.++|.+
T Consensus 124 ~~~----~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 124 WED----VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccC----HHHHHHHHHHhCCCCCEEEEEe
Confidence 633 2557889999999999999974
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.48 E-value=0.00016 Score=74.33 Aligned_cols=64 Identities=22% Similarity=0.259 Sum_probs=46.4
Q ss_pred eEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc--CCCcEEecCCCCCCCCCCC-CcceEEec
Q 044932 311 VVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER--GFPAVVSPLGNRRLPFPSG-VFDAIHCD 379 (689)
Q Consensus 311 ~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR--GL~~i~~~~dt~~LPFpD~-SFDlVhcs 379 (689)
+|||||||+|.++..|+.. .|+++|+++. |++.+.++ +....+...|...+++++. .||.|++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~-----~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLR-----LRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVAN 117 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGG-----GHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHH-----HHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEec
Confidence 8999999999999988865 5999999874 55555554 2233455567777777643 67887754
No 271
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.48 E-value=7.6e-05 Score=70.56 Aligned_cols=129 Identities=18% Similarity=0.201 Sum_probs=84.8
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccccchhhccccCCC---CCCC-ccchhhcccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRGLVGIYHDWCESF---GTYP-RSYDLLHADHLFSRLK 622 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RGLig~yhdwce~f---~typ-rTyDLlHa~~lfs~~~ 622 (689)
..|||+++|.|.++.+|..... +|+-++- +..+...-.++.+.+.+.-.+.+ +..+ .+||+|.+.++|. .
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~- 128 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H- 128 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S-
T ss_pred CEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h-
Confidence 6899999999999999988754 3444443 24445555554333332111222 3334 4599999998887 2
Q ss_pred CCcCCccceeeeeccccccCcEEEEeCch--------------------------------hhHHHHHHHHhhcceeEEE
Q 044932 623 SRCRQPVSIVVEMDRILRPGGWAIVRDKV--------------------------------EILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 623 ~~c~~~~~illEmDRILRP~G~~iirD~~--------------------------------~~l~~v~~i~~~lrW~~~~ 670 (689)
.+ ...+|-++-|+|+|||+++|.+.. ..+..+..++..-.+.+.-
T Consensus 129 --~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 129 --QD-IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SC-CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hh-HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 34 356899999999999999997520 1468888888888888754
Q ss_pred e-ecC------CCceEEEEEe
Q 044932 671 T-YAQ------DKEGILCAQK 684 (689)
Q Consensus 671 ~-~~~------~~E~iL~~~K 684 (689)
. ... ...-+++++|
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEE
T ss_pred EecCCCCCCCCceeEEEEeec
Confidence 3 211 1234667776
No 272
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.46 E-value=0.00018 Score=80.67 Aligned_cols=137 Identities=14% Similarity=0.044 Sum_probs=81.2
Q ss_pred eEEEECCccchhHHHhh-------------------cCCeEEEEcCCcccHHHHHHHHHH----cCCCcEE--ecCCCCC
Q 044932 311 VVLEIGSADLSFVASLL-------------------AKEVLTLTVGLKDDLVDLAQVALE----RGFPAVV--SPLGNRR 365 (689)
Q Consensus 311 ~VLDVGCGtGsfaa~La-------------------~~~V~gmDIsp~D~seamlq~A~e----RGL~~i~--~~~dt~~ 365 (689)
+|||.+||+|+|...++ ...++|+|+++. ++.+|+. +|+...+ ...|+..
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~-----~~~lA~~Nl~l~gi~~~i~i~~gDtL~ 321 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPT-----TWKLAAMNMVIRGIDFNFGKKNADSFL 321 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHH-----HHHHHHHHHHHTTCCCBCCSSSCCTTT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHH-----HHHHHHHHHHHhCCCcccceeccchhc
Confidence 89999999999865442 235788888874 3333332 4655433 3445444
Q ss_pred CC-CCCCCcceEEecc--ccccccc--------------------------cHHHHHHHHHhccCCCcEEEEEcCCCchh
Q 044932 366 LP-FPSGVFDAIHCDG--CSITWHA--------------------------HGGKLLLEMNRILRPSGYFILSTKHDSIE 416 (689)
Q Consensus 366 LP-FpD~SFDlVhcs~--cli~W~~--------------------------d~~~aL~EI~RVLRPGG~fVIsdp~~~le 416 (689)
.| +++..||+|++.- ....|.. ..-.+|..+.+.|+|||++++..|...+.
T Consensus 322 ~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~ 401 (544)
T 3khk_A 322 DDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMS 401 (544)
T ss_dssp SCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHH
T ss_pred CcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhh
Confidence 33 5678999999851 1111210 01257889999999999999998876542
Q ss_pred ----HHHHHHHHHHhccee-EEEe-ecccc----CceeEEEEEeCC
Q 044932 417 ----EEEALTTLTASICWN-ILAH-KTDEI----SEMGVKIYQKPE 452 (689)
Q Consensus 417 ----~~~~ie~La~~l~W~-~v~~-~~~~~----g~~~i~IwqKp~ 452 (689)
....+.+.+-.-++- .+.. ....+ -...|++++|..
T Consensus 402 ~~~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k 447 (544)
T 3khk_A 402 SNTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDK 447 (544)
T ss_dssp CCGGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCC
T ss_pred cCcchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCC
Confidence 223455554444442 2221 11111 134577777754
No 273
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.45 E-value=0.00013 Score=69.49 Aligned_cols=132 Identities=16% Similarity=0.203 Sum_probs=84.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccc--cchhhccccCCCCCCCccchhhccccccccccCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRG--LVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSR 624 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RG--Lig~yhdwce~f~typrTyDLlHa~~lfs~~~~~ 624 (689)
..|+|+++|.|.++.+|..... +|+-++-. ..+...-.+- -|-+++.=.+.++ ++.+||+|.+.++|....+.
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 122 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE-VPTSIDTIVSTYAFHHLTDD 122 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC-CCSCCSEEEEESCGGGSCHH
T ss_pred CeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC-CCCCeEEEEECcchhcCChH
Confidence 4799999999999999987743 34444432 3333322221 1222222222233 33899999999998876443
Q ss_pred cCCccceeeeeccccccCcEEEEeCch----h---------------------------hHHHHHHHHhhcceeEEEeec
Q 044932 625 CRQPVSIVVEMDRILRPGGWAIVRDKV----E---------------------------ILDPLEGILRSLHWEIRMTYA 673 (689)
Q Consensus 625 c~~~~~illEmDRILRP~G~~iirD~~----~---------------------------~l~~v~~i~~~lrW~~~~~~~ 673 (689)
-. ..+|-++-|+|+|||.++|.+.. . ....++.++....+++.....
T Consensus 123 ~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 123 EK--NVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HH--HHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred HH--HHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 22 23789999999999999998521 1 236677788877887765544
Q ss_pred CCCceEEEEEec
Q 044932 674 QDKEGILCAQKT 685 (689)
Q Consensus 674 ~~~E~iL~~~K~ 685 (689)
.+---++.++|+
T Consensus 201 ~~~~w~~~~~~~ 212 (220)
T 3hnr_A 201 NHFVWVMEATKQ 212 (220)
T ss_dssp SSSEEEEEEEEC
T ss_pred cceEEEEeehhh
Confidence 444567777664
No 274
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.42 E-value=4.6e-05 Score=76.04 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=67.6
Q ss_pred hhcccCCCCCCeeEEeecCCcchhHHHHhc-cCCceEEEeccCCC-CCchhhhhc----cccchhhccccCCCCCCCccc
Q 044932 536 YLTGLGIDWSKIRNVMDMKSIYGGFAAALA-QQKIWVMNVVPVHA-PDTLPVIYD----RGLVGIYHDWCESFGTYPRSY 609 (689)
Q Consensus 536 y~~~l~~~~~~iRNvmDMna~~GgFAAal~-~~~vWVMNvvp~~~-~~tL~vI~~----RGLig~yhdwce~f~typrTy 609 (689)
++..+.+..+ ..|+|+++|.|+++..|. ..+. +|+-++- +..+...-. .|+..-.+-.+..+..+|.+|
T Consensus 56 ~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~f 130 (287)
T 1kpg_A 56 ALGKLGLQPG--MTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPV 130 (287)
T ss_dssp HHTTTTCCTT--CEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCC
T ss_pred HHHHcCCCCc--CEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCe
Confidence 3444455444 479999999999998887 3343 3444443 233333322 243221111122223356999
Q ss_pred hhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 610 DLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
|+|.+.++|...... . ...+|-++-|+|+|||.++|.+
T Consensus 131 D~v~~~~~l~~~~~~-~-~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHE-R-YDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp SEEEEESCGGGTCTT-T-HHHHHHHHHHHSCTTCEEEEEE
T ss_pred eEEEEeCchhhcChH-H-HHHHHHHHHHhcCCCCEEEEEE
Confidence 999999999877432 2 2467899999999999999975
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.42 E-value=0.00057 Score=78.73 Aligned_cols=121 Identities=18% Similarity=0.205 Sum_probs=65.1
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhh----ccccch-----hhccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIY----DRGLVG-----IYHDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~----~RGLig-----~yhdwce~f~typrTyDLlHa~~l 617 (689)
..|+|+.+|.|+|+.++.....- .|+-++.. ..|...- .-|+-+ +-.|..+.++....+||+|-++--
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 36999999999998877654321 13333432 2222221 123321 112322223334578999987653
Q ss_pred -cccccC-------CcCCccceeeeeccccccCcEEEEeCchhhHHHHHHHHhhcceeEEEe
Q 044932 618 -FSRLKS-------RCRQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 618 -fs~~~~-------~c~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~~~lrW~~~~~ 671 (689)
|+.-.. .-. ...|+-++=|+|+|||++++.-.......-...+....++....
T Consensus 619 ~f~~~~~~~~~~~~~~~-~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i 679 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRD-HLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 679 (703)
T ss_dssp SBC-------CCBHHHH-HHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEEC
T ss_pred cccCCccchhHHHHHHH-HHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeee
Confidence 221110 012 24567788899999999999866532222234445555654443
No 276
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.39 E-value=0.00031 Score=66.85 Aligned_cols=119 Identities=14% Similarity=0.063 Sum_probs=78.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCchhhhhccccchhhccccCCCCCCCccchhhccccccccccCCcCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTLPVIYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRCRQ 627 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL~vI~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c~~ 627 (689)
..|+|+++|.|.++..|. ..|...-.-|. . + -+.+.-.+.++.-+.+||+|.+..+|. + -.
T Consensus 69 ~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~----~--~-------~~~~~d~~~~~~~~~~fD~v~~~~~l~-~---~~- 129 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR-NPVHCFDLASL----D--P-------RVTVCDMAQVPLEDESVDVAVFCLSLM-G---TN- 129 (215)
T ss_dssp SCEEEETCTTCHHHHHCC-SCEEEEESSCS----S--T-------TEEESCTTSCSCCTTCEEEEEEESCCC-S---SC-
T ss_pred CeEEEECCcCCHHHHHhh-ccEEEEeCCCC----C--c-------eEEEeccccCCCCCCCEeEEEEehhcc-c---cC-
Confidence 469999999999999884 33333222221 1 1 111111223454567999999988884 2 23
Q ss_pred ccceeeeeccccccCcEEEEeCchh---hHHHHHHHHhhcceeEEEeecC-CCceEEEEEec
Q 044932 628 PVSIVVEMDRILRPGGWAIVRDKVE---ILDPLEGILRSLHWEIRMTYAQ-DKEGILCAQKT 685 (689)
Q Consensus 628 ~~~illEmDRILRP~G~~iirD~~~---~l~~v~~i~~~lrW~~~~~~~~-~~E~iL~~~K~ 685 (689)
...+|-++-|+|+|||.++|-+-.. ....+..++....++....... ..-.+++++|.
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKT 191 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEec
Confidence 3568899999999999999976443 5677888888888876544322 23467777775
No 277
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.39 E-value=0.00011 Score=79.45 Aligned_cols=96 Identities=11% Similarity=0.009 Sum_probs=62.4
Q ss_pred CCeEEEECCccchhHHHhhc-----CCeEEEEcCCcccHHHHHHHHHHcCCCc---EEecCCCCCC-C-CCCCCcceEEe
Q 044932 309 IRVVLEIGSADLSFVASLLA-----KEVLTLTVGLKDDLVDLAQVALERGFPA---VVSPLGNRRL-P-FPSGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~-----~~V~gmDIsp~D~seamlq~A~eRGL~~---i~~~~dt~~L-P-FpD~SFDlVhc 378 (689)
..+|||++||+|.++..++. ..|+++|+++.-. +.+.+-+...|+.. .+...|+..+ . .....||+|++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av-~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAI-EIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHH-HHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 46899999999999987765 2489999987421 22222333346653 3444443221 1 11368999987
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
.- + ..+..++..+.+.|+|||+++++.
T Consensus 132 DP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 53 1 112368888999999999999875
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.34 E-value=0.00033 Score=80.15 Aligned_cols=94 Identities=13% Similarity=0.095 Sum_probs=59.5
Q ss_pred CCeEEEECCccchh---HHHhhc---C--CeEEEEcCCcccHHHHHHHHHHcCCCcE--EecCCCCCCCCCCCCcceEEe
Q 044932 309 IRVVLEIGSADLSF---VASLLA---K--EVLTLTVGLKDDLVDLAQVALERGFPAV--VSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsf---aa~La~---~--~V~gmDIsp~D~seamlq~A~eRGL~~i--~~~~dt~~LPFpD~SFDlVhc 378 (689)
..+|||||||+|-+ ++.... . .|+++.-+|. ..-.++...+.+.... +...+++.+-.| ..+|+|++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~--A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN--AVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH--HHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH--HHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEE
Confidence 45799999999975 222222 2 4788887762 2334455555565443 334456666666 68999986
Q ss_pred c---cccccccccHHHHHHHHHhccCCCcEEE
Q 044932 379 D---GCSITWHAHGGKLLLEMNRILRPSGYFI 407 (689)
Q Consensus 379 s---~cli~W~~d~~~aL~EI~RVLRPGG~fV 407 (689)
- .+++. +.....|.-.+|.|||||.++
T Consensus 435 EwMG~fLl~--E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADN--ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGG--GCHHHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccc--cCCHHHHHHHHHhcCCCcEEc
Confidence 3 22222 223357777899999999874
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.32 E-value=0.00029 Score=71.42 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=44.8
Q ss_pred CCCeEEEECCccchhHHHhhc-CC--eEEEEcCCcccHHHHHHHHHHcCC---CcEEecCCCCCCCCCCC-----CcceE
Q 044932 308 NIRVVLEIGSADLSFVASLLA-KE--VLTLTVGLKDDLVDLAQVALERGF---PAVVSPLGNRRLPFPSG-----VFDAI 376 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-~~--V~gmDIsp~D~seamlq~A~eRGL---~~i~~~~dt~~LPFpD~-----SFDlV 376 (689)
...+|||||||+|.++. |.. .. |+++|+++ .|++.+.++.- ...+...|...++|++. ..|.|
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~-----~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~v 94 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVGERLDQLTVIELDR-----DLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRV 94 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCH-----HHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEE
T ss_pred CcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCH-----HHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEE
Confidence 34689999999999988 653 35 99999876 57777776521 23455667777777532 23566
Q ss_pred Eec
Q 044932 377 HCD 379 (689)
Q Consensus 377 hcs 379 (689)
+++
T Consensus 95 vsN 97 (252)
T 1qyr_A 95 FGN 97 (252)
T ss_dssp EEE
T ss_pred EEC
Confidence 543
No 280
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.31 E-value=0.0017 Score=67.37 Aligned_cols=137 Identities=12% Similarity=-0.004 Sum_probs=81.9
Q ss_pred CCCeEEEECCccchhHHHhh---------cCCeEEEEcCCcc-------------------------cHHHHHHHHHHcC
Q 044932 308 NIRVVLEIGSADLSFVASLL---------AKEVLTLTVGLKD-------------------------DLVDLAQVALERG 353 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La---------~~~V~gmDIsp~D-------------------------~seamlq~A~eRG 353 (689)
....||++|+..|..+..|+ +..|+++|..... ..+...+...+.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 35689999999997554432 4569999964210 0011222223346
Q ss_pred CC---cEEecCCC-CCCC-CCCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhc
Q 044932 354 FP---AVVSPLGN-RRLP-FPSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASI 428 (689)
Q Consensus 354 L~---~i~~~~dt-~~LP-FpD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l 428 (689)
+. ..+...++ +.|| +++.+||+|+.-... ...-..+|..+.+.|+|||++++.+.........++.++.+..
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~---y~~~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~Av~Ef~~~~ 262 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL---YESTWDTLTNLYPKVSVGGYVIVDDYMMCPPCKDAVDEYRAKF 262 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS---HHHHHHHHHHHGGGEEEEEEEEESSCTTCHHHHHHHHHHHHHT
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc---cccHHHHHHHHHhhcCCCEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 52 22332222 2344 556799999965322 1123467889999999999999988742233446788888888
Q ss_pred ceeEEEeeccccCceeEEEEEeC
Q 044932 429 CWNILAHKTDEISEMGVKIYQKP 451 (689)
Q Consensus 429 ~W~~v~~~~~~~g~~~i~IwqKp 451 (689)
++......-+ .+.+.|+|+
T Consensus 263 ~i~~~i~~~~----~~~v~~rk~ 281 (282)
T 2wk1_A 263 DIADELITID----RDGVYWQRT 281 (282)
T ss_dssp TCCSCCEECS----SSCEEEECC
T ss_pred CCceEEEEec----CEEEEEEeC
Confidence 8765433221 235778875
No 281
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.30 E-value=0.00013 Score=71.85 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=64.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccc-cchhhccccCCCCCCCccchhhcccc-ccccccCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRG-LVGIYHDWCESFGTYPRSYDLLHADH-LFSRLKSR 624 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RG-Lig~yhdwce~f~typrTyDLlHa~~-lfs~~~~~ 624 (689)
..|||+++|.|.|+..|..... +|+-++- +..|...-.+. =|-+.+.=.+.++. +.+||+|.+.+ +|....+.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHH
T ss_pred CcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCH
Confidence 5799999999999999987743 4555543 23333333321 01122222233444 89999999987 88776543
Q ss_pred cCCccceeeeeccccccCcEEEEe
Q 044932 625 CRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 625 c~~~~~illEmDRILRP~G~~iir 648 (689)
-. +..+|-++-|+|+|||.++|.
T Consensus 128 ~~-~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 128 AE-LDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HH-HHHHHHHHHHTEEEEEEEEEC
T ss_pred HH-HHHHHHHHHHhcCCCcEEEEE
Confidence 34 256788999999999999995
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.30 E-value=0.00022 Score=76.38 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=62.0
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc-CC-------CcEEecCCCCCCC-CCCCCcc
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER-GF-------PAVVSPLGNRRLP-FPSGVFD 374 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR-GL-------~~i~~~~dt~~LP-FpD~SFD 374 (689)
.+.+|||++||.|+=+.+|+.. .|+++|+++.-. ..+....+| |+ ...+...|+..++ +..+.||
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~--~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI--ARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH--HHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH--HHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 4578999999999877666543 488888876311 222222222 32 2334455555543 3457999
Q ss_pred eEEe----ccc---c------ccccccH----------HHHHHHHHhccCCCcEEEEEc
Q 044932 375 AIHC----DGC---S------ITWHAHG----------GKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 375 lVhc----s~c---l------i~W~~d~----------~~aL~EI~RVLRPGG~fVIsd 410 (689)
.|++ +.. . +.|.... ..+|....+.|||||+++.++
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 9984 321 0 1121111 246778889999999999986
No 283
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.28 E-value=6.4e-05 Score=71.52 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=83.2
Q ss_pred eEEeecCCcchhHHHHhccCC--ceEEEeccCCC-CCchhhhhc----ccc--chhhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQK--IWVMNVVPVHA-PDTLPVIYD----RGL--VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~--vWVMNvvp~~~-~~tL~vI~~----RGL--ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++.+|.... -. .|+-++. +..+...-. .|+ |-+.+.=.+.++.-+.+||+|.+.++|
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKG--KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTF 116 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhh
Confidence 479999999999999886531 11 2333332 222222222 222 112221123344456789999999999
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeCch-------------hhHHHHHHHHhhcceeEEE-eecCCCceEEEEEe
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-------------EILDPLEGILRSLHWEIRM-TYAQDKEGILCAQK 684 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD~~-------------~~l~~v~~i~~~lrW~~~~-~~~~~~E~iL~~~K 684 (689)
....+ ...+|-++-|+|+|||.++|-+-. .....+..++....|+... .+......+++++|
T Consensus 117 ~~~~~----~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 117 HELSE----PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp GGCSS----HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred hhcCC----HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 87743 256789999999999999997521 1367888888888887543 33344456677776
Q ss_pred c
Q 044932 685 T 685 (689)
Q Consensus 685 ~ 685 (689)
.
T Consensus 193 ~ 193 (219)
T 3dh0_A 193 V 193 (219)
T ss_dssp C
T ss_pred c
Confidence 4
No 284
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.27 E-value=0.00031 Score=66.58 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=75.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----cccchhhccccCCCCCCCccchhhcccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
..|+|+++|.|.++.+|...+. .+|+-++. +..+...-. .|+-.+-.-.+..++..+.+||+|.++..+..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH--
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH--
Confidence 4799999999999999987653 13444443 223322222 24322222223334456799999999877753
Q ss_pred CCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEEEe
Q 044932 623 SRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 623 ~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~~~ 671 (689)
+..+|-++-|+|+|||.+++.+ ...-...+..++....++....
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 2567889999999999999974 3345677777787777776443
No 285
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.26 E-value=0.0002 Score=77.90 Aligned_cols=100 Identities=13% Similarity=-0.045 Sum_probs=59.8
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHHc------CCC-cEEecCCCCC-CCC-CCCCcceEE
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALER------GFP-AVVSPLGNRR-LPF-PSGVFDAIH 377 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~eR------GL~-~i~~~~dt~~-LPF-pD~SFDlVh 377 (689)
..+|||+|||+|.++.+|+.. .|+++|+++. +++.|.++ |+. ..+...|... |+. ++++||+|+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~-----~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDE-----TAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHH-----HHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHH-----HHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEE
Confidence 478999999999998888765 4999999874 44444432 553 3344455443 232 346899999
Q ss_pred ecc-------ccccccccHHHHHHHHHhccC-CCcEEEEEcCCC
Q 044932 378 CDG-------CSITWHAHGGKLLLEMNRILR-PSGYFILSTKHD 413 (689)
Q Consensus 378 cs~-------cli~W~~d~~~aL~EI~RVLR-PGG~fVIsdp~~ 413 (689)
+.- -.+.-..+...-+.++.++|. .+..++|..+|.
T Consensus 169 lDPPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~ 212 (410)
T 3ll7_A 169 VDPARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPM 212 (410)
T ss_dssp ECCEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTT
T ss_pred ECCCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCC
Confidence 831 011111122234566666554 345666666553
No 286
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.25 E-value=0.0012 Score=66.62 Aligned_cols=70 Identities=21% Similarity=0.285 Sum_probs=48.3
Q ss_pred HHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcC-CCcEEecCCCCCCC
Q 044932 292 YLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERG-FPAVVSPLGNRRLP 367 (689)
Q Consensus 292 Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRG-L~~i~~~~dt~~LP 367 (689)
+++.|.+.+. +. ...+|||+|||+|.++..|+.. .|+++|+++ .+++.+.++. ....+...|...++
T Consensus 19 i~~~iv~~~~-~~---~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~-----~~~~~~~~~~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 19 VLKKIAEELN-IE---EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDR-----EMVENLKSIGDERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHTT-CC---TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCH-----HHHHHHTTSCCTTEEEECSCTTTCC
T ss_pred HHHHHHHhcC-CC---CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCH-----HHHHHHHhccCCCeEEEEcchhhCC
Confidence 3444555443 11 3568999999999999999865 489999875 5777776662 12345566777888
Q ss_pred CCC
Q 044932 368 FPS 370 (689)
Q Consensus 368 FpD 370 (689)
|++
T Consensus 90 ~~~ 92 (249)
T 3ftd_A 90 FCS 92 (249)
T ss_dssp GGG
T ss_pred hhH
Confidence 774
No 287
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.21 E-value=0.0002 Score=65.54 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=81.6
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc--ccchhhccccCCCCCCCccchhhccccccccccC
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR--GLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKS 623 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R--GLig~yhdwce~f~typrTyDLlHa~~lfs~~~~ 623 (689)
-..|+|+++|.|.++.+|.... . +|+-++-. ..+...-.+ .+--+..| ++.-+.+||+|.+..+|....+
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA-T--KLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE-E--EEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCSC
T ss_pred CCeEEEECCCCCHHHHHHHhhc-C--eEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhcccC
Confidence 4679999999999999998774 2 55555542 333333333 11111122 4445679999999999887643
Q ss_pred CcCCccceeeeeccccccCcEEEEeCchh-------------hHHHHHHHHhhcceeEEEe-ecCCCceEEEEEec
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRDKVE-------------ILDPLEGILRSLHWEIRMT-YAQDKEGILCAQKT 685 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD~~~-------------~l~~v~~i~~~lrW~~~~~-~~~~~E~iL~~~K~ 685 (689)
...+|-++-|+|+|||.++|.+-.. ....++.++. .|+..-. +.....-+|++.|+
T Consensus 91 ----~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~ 160 (170)
T 3i9f_A 91 ----KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRK 160 (170)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEEC
T ss_pred ----HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecC
Confidence 2567889999999999999984211 2456677766 6665333 22334456666664
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.20 E-value=0.00032 Score=73.07 Aligned_cols=104 Identities=12% Similarity=0.077 Sum_probs=58.4
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccc--
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCS-- 382 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cl-- 382 (689)
..+|||+|||+|+|+.+.+.. .|.++|+... .+...+.. ...+...+....++.-..++...||+|+|...-
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d-~~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmApns 168 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ-GHEKPIMR-TTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGESS 168 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT-TSCCCCCC-CBTTGGGEEEECSCCGGGSCCCCCSEEEECCCCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC-cccccccc-ccCCCceEEeeCCcchhhcCCCCcCEEEecCccCC
Confidence 468999999999999877643 3677887642 11000000 001111222211212223567899999985321
Q ss_pred -ccccccHH--HHHHHHHhccCCC--cEEEEEcCCCc
Q 044932 383 -ITWHAHGG--KLLLEMNRILRPS--GYFILSTKHDS 414 (689)
Q Consensus 383 -i~W~~d~~--~aL~EI~RVLRPG--G~fVIsdp~~~ 414 (689)
+++.+... .+|.=+.++|+|| |.|++-.-..+
T Consensus 169 G~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py 205 (282)
T 3gcz_A 169 PSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY 205 (282)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC
T ss_pred CChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC
Confidence 12222211 2344456899999 99999876643
No 289
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.19 E-value=0.00036 Score=71.84 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=41.6
Q ss_pred CCCeEEEECCccchhHHHhhc--CC----eEEEEcCCcccHHHHHHHHHHc-CCCcEEecCCCCCCCCCC
Q 044932 308 NIRVVLEIGSADLSFVASLLA--KE----VLTLTVGLKDDLVDLAQVALER-GFPAVVSPLGNRRLPFPS 370 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~--~~----V~gmDIsp~D~seamlq~A~eR-GL~~i~~~~dt~~LPFpD 370 (689)
...+|||||||+|.++..|+. .. |+++|+++ .|++.+.++ .....+...|...++|++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~-----~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDR-----DLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH-----HHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH-----HHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 357899999999999988875 34 99999986 466666665 112334556677777763
No 290
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.17 E-value=0.00024 Score=66.89 Aligned_cols=131 Identities=12% Similarity=0.066 Sum_probs=84.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccc--cchhhccccCCCCCCCccchhhccccccccccCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRG--LVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSR 624 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RG--Lig~yhdwce~f~typrTyDLlHa~~lfs~~~~~ 624 (689)
..|||+++|.|.|+..|..... +|+-++- +..+...-.+. +-=+..|. +.++.-+.+||+|.+.++|.....
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~~- 117 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMGP- 117 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCCT-
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCCH-
Confidence 3599999999999999987743 3444443 23333333331 11111222 334545689999999998887642
Q ss_pred cCCccceeeeeccccccCcEEEEeCch----------------hhHHHHHHHHhhcceeEEEeec--CCCceEEEEEe
Q 044932 625 CRQPVSIVVEMDRILRPGGWAIVRDKV----------------EILDPLEGILRSLHWEIRMTYA--QDKEGILCAQK 684 (689)
Q Consensus 625 c~~~~~illEmDRILRP~G~~iirD~~----------------~~l~~v~~i~~~lrW~~~~~~~--~~~E~iL~~~K 684 (689)
-+ +..+|-++-|+|+|||.++|.+-. .....++.++....|++..... ..+...|+..|
T Consensus 118 ~~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~ 194 (203)
T 3h2b_A 118 GE-LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEA 194 (203)
T ss_dssp TT-HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEE
T ss_pred HH-HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhh
Confidence 23 256899999999999999997521 2368888999888898755422 22344444443
No 291
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.15 E-value=5.3e-05 Score=73.56 Aligned_cols=120 Identities=12% Similarity=0.092 Sum_probs=76.1
Q ss_pred CeeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----ccchhhccccCCCCCCCccchhhcccccccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----GLVGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----GLig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
.-..|+|+++|.|.++..|..... -+|+-++- +..|...-.+ .-+-+.+.-.+.++.-+.+||+|.+.++|..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 346799999999999998876431 12333332 2233333222 1122222222335545689999999999887
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeCch----------------hhHHHHHHHHhhcceeEE
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRDKV----------------EILDPLEGILRSLHWEIR 669 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD~~----------------~~l~~v~~i~~~lrW~~~ 669 (689)
+.+. . +..+|-++-|+|+|||.++|.+.. .....++.++....++..
T Consensus 171 ~~~~-~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 171 LTDA-D-FVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp SCHH-H-HHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred CCHH-H-HHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 6431 2 256789999999999999998731 123677777777777654
No 292
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.15 E-value=0.00029 Score=64.76 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=74.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccc-cchhhc-cccCCCCCCCccchhhccc-cccccccC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRG-LVGIYH-DWCESFGTYPRSYDLLHAD-HLFSRLKS 623 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RG-Lig~yh-dwce~f~typrTyDLlHa~-~lfs~~~~ 623 (689)
..|+|+++|.|.++..|..... +|+-++.. ..+...-.+. =+-+++ |.. .++.-+.+||+|.+. .++.....
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLS-VDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TSCCCCCCEEEEEECCCCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEcccc-cCCCCCCceeEEEECCcHHhhcCh
Confidence 4799999999999999987653 34444432 2222222211 022222 222 233335799999998 56665422
Q ss_pred CcCCccceeeeeccccccCcEEEEeCchh---hHHHHHHHHhhcceeEEEe
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRDKVE---ILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD~~~---~l~~v~~i~~~lrW~~~~~ 671 (689)
. . ...+|-++-|+|+|||.++|..... ....+..++....+++.-.
T Consensus 124 ~-~-~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 124 D-G-REPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp H-H-HHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred H-H-HHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeee
Confidence 1 2 2467889999999999999964332 4677788887777876543
No 293
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.15 E-value=0.00011 Score=69.79 Aligned_cols=100 Identities=15% Similarity=0.240 Sum_probs=68.1
Q ss_pred CCeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----ccchhhccccCCCCCCCccchhhccccccc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GLVGIYHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GLig~yhdwce~f~typrTyDLlHa~~lfs 619 (689)
..-..|+|+++|.|.++..|.... .+|+-++-. ..+...-.+ +-|-+++.=.+.++ .+.+||+|.+.++|.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 456789999999999999998763 355555542 333322222 22223332233344 478999999999998
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
...+.-. +..+|-++-|+|+|||.++|..
T Consensus 126 ~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 126 YLEDMTQ-MRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GSSSHHH-HHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCCHHH-HHHHHHHHHHHcCCCCEEEEEe
Confidence 7765444 2457899999999999999953
No 294
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.14 E-value=0.0012 Score=74.22 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=74.2
Q ss_pred CCCeEEEECCccchhHHHhhc-------CCeEEEEcCCcccHHHHHHHHH----HcCCC---cEEecCCCCCC--C-CCC
Q 044932 308 NIRVVLEIGSADLSFVASLLA-------KEVLTLTVGLKDDLVDLAQVAL----ERGFP---AVVSPLGNRRL--P-FPS 370 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~-------~~V~gmDIsp~D~seamlq~A~----eRGL~---~i~~~~dt~~L--P-FpD 370 (689)
...+|||.+||+|+|...++. ..++|+++++. +..+|+ -+|+. ..+...|+... | ++.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~-----~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~ 295 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTS-----TYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEP 295 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHH-----HHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHH-----HHHHHHHHHHHcCCCcCccceEecceeccccccccc
Confidence 356899999999998655432 35899999874 333333 24663 23445565544 4 457
Q ss_pred CCcceEEecc-ccccccc---------------------cHHHHHHHHHhccC-CCcEEEEEcCCCchh---HHHHHHHH
Q 044932 371 GVFDAIHCDG-CSITWHA---------------------HGGKLLLEMNRILR-PSGYFILSTKHDSIE---EEEALTTL 424 (689)
Q Consensus 371 ~SFDlVhcs~-cli~W~~---------------------d~~~aL~EI~RVLR-PGG~fVIsdp~~~le---~~~~ie~L 424 (689)
..||+|++.- ....|.. ..-.++..+.+.|+ |||++++..|...+. ....+.+.
T Consensus 296 ~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~ 375 (542)
T 3lkd_A 296 TNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKA 375 (542)
T ss_dssp CCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHH
T ss_pred ccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHH
Confidence 8999999751 0011210 01247889999999 999999999887652 12345555
Q ss_pred HHhcce
Q 044932 425 TASICW 430 (689)
Q Consensus 425 a~~l~W 430 (689)
+-.-++
T Consensus 376 Lle~~~ 381 (542)
T 3lkd_A 376 LLEEGA 381 (542)
T ss_dssp HHHTTC
T ss_pred HHhCCc
Confidence 444344
No 295
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.13 E-value=7.5e-05 Score=71.45 Aligned_cols=93 Identities=20% Similarity=0.355 Sum_probs=61.3
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccc--cchhhccccCCCCCCCccchhhccccccccccCCc
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRG--LVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRC 625 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RG--Lig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c 625 (689)
.|+|+++|.|.++..|..... +|+-++.. ..+...-.+- -|-+++.-.+.+ ..+.+||+|++.++|....+.
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~- 119 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDP- 119 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSH-
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCH-
Confidence 499999999999999987532 33333322 2222222221 111222222223 357899999999999877542
Q ss_pred CCccceeeeec-cccccCcEEEEeC
Q 044932 626 RQPVSIVVEMD-RILRPGGWAIVRD 649 (689)
Q Consensus 626 ~~~~~illEmD-RILRP~G~~iirD 649 (689)
..+|-|+- |+|+|||+++|.+
T Consensus 120 ---~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 120 ---VALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---HHHHHHHHHHhcCCCCEEEEEc
Confidence 45789999 9999999999975
No 296
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.12 E-value=0.00015 Score=72.64 Aligned_cols=95 Identities=19% Similarity=0.272 Sum_probs=64.6
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhh----cccc---chhhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIY----DRGL---VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~----~RGL---ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++..|... +. +|+-++-. ..|...- ..|+ |-+.+.=.+.++.-+.+||+|.+.++|
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 47999999999999998765 43 34444432 3332222 2343 222222223445446899999999999
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
....+ ...+|-+|-|+|+|||.++|.+
T Consensus 161 ~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 161 LHSPD----KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp GGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 88765 2567999999999999999985
No 297
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.12 E-value=7.8e-05 Score=73.74 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=64.8
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhh----hcccc---chhhccccCCCCCCCccchhhcccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVI----YDRGL---VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI----~~RGL---ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
-..|+|+++|.|.++..|...+-. +|+-++- +..+... -..|+ |-+.+.=.+.++.-+.+||+|++.++|
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTG--QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCC--EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 357999999999999999876421 2333332 2333222 22333 222222234555556899999999998
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
... + ...+|-++-|+|+|||+++|.+
T Consensus 125 ~~~----~-~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 125 YNI----G-FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GGT----C-HHHHHHHHGGGEEEEEEEEEEE
T ss_pred eec----C-HHHHHHHHHHHcCCCCEEEEEE
Confidence 776 3 3668999999999999999975
No 298
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.12 E-value=0.00015 Score=67.48 Aligned_cols=114 Identities=17% Similarity=0.226 Sum_probs=72.5
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhh----cccc--chhh-ccccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIY----DRGL--VGIY-HDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~----~RGL--ig~y-hdwce~f~typrTyDLlHa~~lfs 619 (689)
.+|+|+++|.|.++..|..... +|+-++.. ..+...- ..|+ |-+. .|.. .++. +.+||+|.+.++|.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCCC-CCCEEEEEEESCGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCCC-CCCceEEEEcchhh
Confidence 4899999999999999987653 34444432 2222221 2232 2222 2333 3444 89999999999887
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeCch--------------hhHHHHHHHHhhcceeEEE
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV--------------EILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD~~--------------~~l~~v~~i~~~lrW~~~~ 670 (689)
.... -. ...+|-++-|+|+|||.++|-+.. --...++.++.. |+...
T Consensus 109 ~~~~-~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~ 169 (199)
T 2xvm_A 109 FLEA-KT-IPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVK 169 (199)
T ss_dssp GSCG-GG-HHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEE
T ss_pred hCCH-HH-HHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEE
Confidence 6542 22 256889999999999997764311 134567777766 76643
No 299
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.11 E-value=4.8e-05 Score=74.15 Aligned_cols=93 Identities=17% Similarity=0.226 Sum_probs=64.2
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhh----hcccc---chhh-ccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVI----YDRGL---VGIY-HDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI----~~RGL---ig~y-hdwce~f~typrTyDLlHa~~l 617 (689)
..|+|+++|.|.++..|... +. .|+-++- +..+... -..|+ |-+. .|+ +.++.-+.+||+|++.++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecCh
Confidence 37999999999999998764 22 3444443 2333322 23343 2222 333 555655689999999999
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
|... + ...+|-++-|+|+|||+++|.+
T Consensus 124 l~~~----~-~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 124 IYNI----G-FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCCC----C-HHHHHHHHHTTEEEEEEEEEEE
T ss_pred Hhhc----C-HHHHHHHHHHHcCCCcEEEEEE
Confidence 8776 3 3678999999999999999986
No 300
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.10 E-value=0.00019 Score=72.93 Aligned_cols=72 Identities=14% Similarity=-0.047 Sum_probs=46.0
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccH--HHHHHHHHHc----CCC--cEEecCCCCC-CC-CCC--CCcc
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDL--VDLAQVALER----GFP--AVVSPLGNRR-LP-FPS--GVFD 374 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~s--eamlq~A~eR----GL~--~i~~~~dt~~-LP-FpD--~SFD 374 (689)
..+|||+|||+|.++..|+.. .|+++|+++.... ..+++.|.++ ++. ..+...+... ++ +++ ++||
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 468999999999998888754 5999999872110 1345555432 321 3344445433 23 555 7999
Q ss_pred eEEecc
Q 044932 375 AIHCDG 380 (689)
Q Consensus 375 lVhcs~ 380 (689)
+|++..
T Consensus 164 ~V~~dP 169 (258)
T 2r6z_A 164 IVYLDP 169 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999853
No 301
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.09 E-value=0.00013 Score=71.24 Aligned_cols=105 Identities=19% Similarity=0.228 Sum_probs=69.4
Q ss_pred hhcccCCCCCCeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhh----cccc--chhhccccCCCCCCCcc
Q 044932 536 YLTGLGIDWSKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIY----DRGL--VGIYHDWCESFGTYPRS 608 (689)
Q Consensus 536 y~~~l~~~~~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~----~RGL--ig~yhdwce~f~typrT 608 (689)
++..+.+.. -..|+|+++|.|.++.+|....- +|+-++.. ..+...- .+|+ |-+.+.=.+.++.-+.+
T Consensus 13 ~~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 13 MIKTAECRA--EHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHTCCT--TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTC
T ss_pred HHHHhCcCC--CCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCc
Confidence 444445543 35799999999999999976532 44444432 3333222 2232 22233333556655689
Q ss_pred chhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 609 YDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 609 yDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
||+|.+.+++..+.+ ...+|-+|-|+|+|||+++|-+
T Consensus 88 fD~v~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 88 FDIITCRYAAHHFSD----VRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEECCchhhccC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 999999988877643 2567999999999999999964
No 302
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.07 E-value=5.2e-05 Score=73.80 Aligned_cols=95 Identities=15% Similarity=0.226 Sum_probs=63.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccccchhhc-cccCCC-CCCCccchhhccccccccccCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRGLVGIYH-DWCESF-GTYPRSYDLLHADHLFSRLKSR 624 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RGLig~yh-dwce~f-~typrTyDLlHa~~lfs~~~~~ 624 (689)
..|||+++|.|.|+.+|..... +|+-++- +..+...-.+ +-+.+ |..+-+ +.-+.+||+|.+.++|....+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~ 117 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPE 117 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGG
T ss_pred CeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcH
Confidence 5699999999999999987643 2333333 2334443333 22221 222211 2245899999999999877532
Q ss_pred cCCccceeeeeccccccCcEEEEeC
Q 044932 625 CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 625 c~~~~~illEmDRILRP~G~~iirD 649 (689)
. +..+|-+|-|+|+|||+++|..
T Consensus 118 -~-~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 118 -R-LFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp -G-HHHHHHHHHHHBCTTCCEEEEE
T ss_pred -H-HHHHHHHHHHHcCCCcEEEEEe
Confidence 2 2467999999999999999974
No 303
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.07 E-value=0.0001 Score=67.82 Aligned_cols=129 Identities=15% Similarity=0.178 Sum_probs=76.5
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----cc----c-hhhccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----GL----V-GIYHDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----GL----i-g~yhdwce~f~typrTyDLlHa~~l 617 (689)
..|+|+++|.|.++.+|..... +|+-++. +..+...-.+ |+ + -+..|+.+.++ +.+||+|.++..
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~ 128 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPP 128 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCC
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCC
Confidence 4799999999999998887632 3443332 2222222221 32 1 12234445433 679999999877
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeCchh-hHHHHHHHHhhcceeEEEeecCCCceEEEEEe
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE-ILDPLEGILRSLHWEIRMTYAQDKEGILCAQK 684 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~-~l~~v~~i~~~lrW~~~~~~~~~~E~iL~~~K 684 (689)
|... .-. +..+|-++-|+|+|||.+++-+... ....+...+...-+++.+....+.-.++.++|
T Consensus 129 ~~~~--~~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 129 IRAG--KEV-LHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp STTC--HHH-HHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEETTEEEEEEEC
T ss_pred cccc--hhH-HHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCCcEEEEEEee
Confidence 6531 112 3567889999999999999875443 44445555544434555443333345555554
No 304
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.06 E-value=0.00017 Score=73.27 Aligned_cols=106 Identities=10% Similarity=0.103 Sum_probs=66.8
Q ss_pred hcccCCCCCCeeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhhc----cccchhhccccCCCCCCCccch
Q 044932 537 LTGLGIDWSKIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIYD----RGLVGIYHDWCESFGTYPRSYD 610 (689)
Q Consensus 537 ~~~l~~~~~~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~~----RGLig~yhdwce~f~typrTyD 610 (689)
+..+.+..+ ..|+|+++|.|+++..|... +. +|+-++- +..+...-. .|+-....-.+..+..+|.+||
T Consensus 83 ~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD 157 (318)
T 2fk8_A 83 LDKLDLKPG--MTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVD 157 (318)
T ss_dssp HTTSCCCTT--CEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCS
T ss_pred HHhcCCCCc--CEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcC
Confidence 334455443 47999999999999988765 43 3444433 233333322 2442211111222333468999
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+|.+.++|..... -. ...+|-++-|+|+|||.++|.+
T Consensus 158 ~v~~~~~l~~~~~-~~-~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 158 RIVSIEAFEHFGH-EN-YDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEEEESCGGGTCG-GG-HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEeChHHhcCH-HH-HHHHHHHHHHhcCCCcEEEEEE
Confidence 9999999886643 22 2567899999999999999875
No 305
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.06 E-value=0.00032 Score=66.96 Aligned_cols=135 Identities=13% Similarity=0.141 Sum_probs=83.7
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----cc-------chhhc-cccCCCCCCCccchhhc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GL-------VGIYH-DWCESFGTYPRSYDLLH 613 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GL-------ig~yh-dwce~f~typrTyDLlH 613 (689)
-..|+|+++|.|.|+.+|.... ...+|+-++-. ..+...-.+ |+ |-+++ |. +.++..+.+||+|-
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAAT 107 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEE
Confidence 3579999999999999998643 11234434332 223222221 21 22222 33 33344457999999
Q ss_pred cccccccccCCcCCccceeeeeccccccCcEEEEeCchhh----------------------HHHH----HHHHhhccee
Q 044932 614 ADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVEI----------------------LDPL----EGILRSLHWE 667 (689)
Q Consensus 614 a~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~~----------------------l~~v----~~i~~~lrW~ 667 (689)
+..+|....+. . +..+|-++-|+|+|||++++-...+. ...+ +.++....++
T Consensus 108 ~~~~l~~~~~~-~-~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~ 185 (219)
T 3jwg_A 108 VIEVIEHLDEN-R-LQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYS 185 (219)
T ss_dssp EESCGGGCCHH-H-HHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEE
T ss_pred EHHHHHhCCHH-H-HHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcE
Confidence 99999877432 1 14578899999999998887644332 2233 3778777888
Q ss_pred EEEee---c----CCCceEEEEEec
Q 044932 668 IRMTY---A----QDKEGILCAQKT 685 (689)
Q Consensus 668 ~~~~~---~----~~~E~iL~~~K~ 685 (689)
+.... . ...-+|-|++|+
T Consensus 186 v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 186 VRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEEecCCccccCCCCeEEEEEecc
Confidence 77652 1 125689999886
No 306
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.05 E-value=0.00047 Score=64.98 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=64.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccccchh---hccccCCCCCCCccchhhccccccccccC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRGLVGI---YHDWCESFGTYPRSYDLLHADHLFSRLKS 623 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RGLig~---yhdwce~f~typrTyDLlHa~~lfs~~~~ 623 (689)
..|+|+++|.|.++.+|..... +|+-++- +..+...-.+|+-.+ ..|..+ + .-+.+||+|.+.++|....+
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~-~-~~~~~~D~v~~~~~l~~~~~ 122 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD-W-TPDRQWDAVFFAHWLAHVPD 122 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS-C-CCSSCEEEEEEESCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc-C-CCCCceeEEEEechhhcCCH
Confidence 3899999999999999987643 3444432 234444444443221 122222 2 35689999999998887654
Q ss_pred CcCCccceeeeeccccccCcEEEEeCc
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRDK 650 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD~ 650 (689)
. . +..+|-++-|+|+|||.++|.+.
T Consensus 123 ~-~-~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 D-R-FEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp H-H-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred H-H-HHHHHHHHHHHcCCCeEEEEEeC
Confidence 2 1 14578999999999999998853
No 307
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.05 E-value=0.00014 Score=71.64 Aligned_cols=103 Identities=23% Similarity=0.258 Sum_probs=65.3
Q ss_pred cccCCCCCCeeEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhh----cccc---chhhccccCCCCCCCcc
Q 044932 538 TGLGIDWSKIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIY----DRGL---VGIYHDWCESFGTYPRS 608 (689)
Q Consensus 538 ~~l~~~~~~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~----~RGL---ig~yhdwce~f~typrT 608 (689)
..+.+..+ ..|+|+++|.|.++..|... .. +|+-++-. ..+...- ..|+ |-+.+.--+.++.-+.+
T Consensus 55 ~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (273)
T 3bus_A 55 ALLDVRSG--DRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDAS 129 (273)
T ss_dssp HHSCCCTT--CEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTC
T ss_pred HhcCCCCC--CEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCC
Confidence 33444433 47999999999999988753 32 33333322 2222222 2243 22222212234444589
Q ss_pred chhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 609 YDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 609 yDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
||+|.+.++|....+. ..+|-++-|+|+|||.++|.+
T Consensus 130 fD~v~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 130 FDAVWALESLHHMPDR----GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEEEEESCTTTSSCH----HHHHHHHHTTEEEEEEEEEEE
T ss_pred ccEEEEechhhhCCCH----HHHHHHHHHHcCCCeEEEEEE
Confidence 9999999998876443 457899999999999999976
No 308
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.03 E-value=0.00014 Score=73.63 Aligned_cols=93 Identities=19% Similarity=0.108 Sum_probs=62.1
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-CchhhhhccccchhhccccCCCCCCCccchhhccccccccccCCcC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRCR 626 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c~ 626 (689)
..|+|.++|.|.++..|....- +|+-++-. .-|...-.+.=|-..+.=.|.++.-+.+||||.+...| +|. +
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~---~ 113 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF---D 113 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC---C
T ss_pred CCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHh---h
Confidence 3699999999999999987642 34444321 11211111222233333356677778999999998888 443 3
Q ss_pred CccceeeeeccccccCcEEEEe
Q 044932 627 QPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 627 ~~~~illEmDRILRP~G~~iir 648 (689)
....+-|+-|||||||.+++-
T Consensus 114 -~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 114 -LDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEE
Confidence 255789999999999998764
No 309
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.02 E-value=0.00014 Score=68.92 Aligned_cols=95 Identities=12% Similarity=0.153 Sum_probs=63.3
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccccchhh-ccccCC-CCCCCccchhhccccccccccC
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRGLVGIY-HDWCES-FGTYPRSYDLLHADHLFSRLKS 623 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RGLig~y-hdwce~-f~typrTyDLlHa~~lfs~~~~ 623 (689)
-.+|+|+++|.|.++.+|...+ .+|+-++-. ..+...-.+. .-++ .|..+. .+.-+.+||+|.+.++|....+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~ 108 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFD 108 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEECChhhhcCC
Confidence 4589999999999999998875 244444432 2333332222 1111 233321 2323489999999998877653
Q ss_pred CcCCccceeeeeccccccCcEEEEeC
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD 649 (689)
. ..+|-++-|+|+|||.+++..
T Consensus 109 ~----~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 109 P----WAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp H----HHHHHHTGGGEEEEEEEEEEE
T ss_pred H----HHHHHHHHHHcCCCCEEEEEe
Confidence 2 467899999999999999964
No 310
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.02 E-value=0.0037 Score=73.49 Aligned_cols=143 Identities=8% Similarity=-0.002 Sum_probs=79.6
Q ss_pred CCeEEEECCccchhHHHhhcC-------CeEEEEcCCcccHHHHHHHHHH-----cCCCc-EEecCCCCCC-CCCCCCcc
Q 044932 309 IRVVLEIGSADLSFVASLLAK-------EVLTLTVGLKDDLVDLAQVALE-----RGFPA-VVSPLGNRRL-PFPSGVFD 374 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~-------~V~gmDIsp~D~seamlq~A~e-----RGL~~-i~~~~dt~~L-PFpD~SFD 374 (689)
..+|||.|||+|.|+..++.. .++|+|+++.....+....... .++.. .+...+...+ +++...||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 568999999999988776532 4899999985221110111111 23322 2222222221 23467899
Q ss_pred eEEecccccc-ccc--------------------------c-HHHHHHHHHhccCCCcEEEEEcCCCchh----HHHHHH
Q 044932 375 AIHCDGCSIT-WHA--------------------------H-GGKLLLEMNRILRPSGYFILSTKHDSIE----EEEALT 422 (689)
Q Consensus 375 lVhcs~cli~-W~~--------------------------d-~~~aL~EI~RVLRPGG~fVIsdp~~~le----~~~~ie 422 (689)
+|++.-=... +.. + ...++..+.+.|+|||++++..|...+. ....+.
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLR 481 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFR 481 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHH
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHH
Confidence 9998521100 000 0 1235677899999999999999987663 234455
Q ss_pred HH-HHhcceeEEEeecc--cc----CceeEEEEEeC
Q 044932 423 TL-TASICWNILAHKTD--EI----SEMGVKIYQKP 451 (689)
Q Consensus 423 ~L-a~~l~W~~v~~~~~--~~----g~~~i~IwqKp 451 (689)
+. ++......+..-.. .+ ....|++++|.
T Consensus 482 k~LLe~~~I~aIIdLP~~~~F~~asv~T~ILIlrK~ 517 (878)
T 3s1s_A 482 EFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKG 517 (878)
T ss_dssp HHHTTTTCEEEEEECCBCCSSCSCBCCEEEEEEETT
T ss_pred HHHHhCCCeEEEEECCCccccCCCCCcEEEEEEEcC
Confidence 54 44444444332222 11 12347777775
No 311
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.01 E-value=7.9e-05 Score=72.59 Aligned_cols=93 Identities=14% Similarity=0.139 Sum_probs=60.9
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhh----hcccc---chhh-ccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVI----YDRGL---VGIY-HDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI----~~RGL---ig~y-hdwce~f~typrTyDLlHa~~l 617 (689)
..|+|+++|.|.++.+|... +. +|+-++. +..|... ...|+ |-+. .|+ +.++. +.+||+|.+.++
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~-~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA-AGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC-TTCCC-SSCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh-HhCCc-CCCCCEEEECCC
Confidence 47999999999999888753 32 2333332 2223222 22343 2222 233 33443 789999999888
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+-...+ ...+|-||-|+|||||.++|.+
T Consensus 113 ~~~~~~----~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 113 TWIAGG----FAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp GGGTSS----SHHHHHHHTTSEEEEEEEEEEE
T ss_pred hHhcCC----HHHHHHHHHHHcCCCeEEEEec
Confidence 765543 2567999999999999999975
No 312
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.00 E-value=0.0012 Score=69.20 Aligned_cols=105 Identities=16% Similarity=0.141 Sum_probs=57.8
Q ss_pred CCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEecccc-
Q 044932 308 NIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCS- 382 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cl- 382 (689)
..++|||+||++|+|+.+++.. .|.++|+...+...... ....+...+....+..-.-++...||+|+|...-
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeecCceeeecCCCCcCEEeecCcCC
Confidence 4689999999999999999874 36677775421000000 0000111111111112223556899999985321
Q ss_pred --ccccccH--HHHHHHHHhccCCC-cEEEEEcCCCc
Q 044932 383 --ITWHAHG--GKLLLEMNRILRPS-GYFILSTKHDS 414 (689)
Q Consensus 383 --i~W~~d~--~~aL~EI~RVLRPG-G~fVIsdp~~~ 414 (689)
++..+.. ..+|.=+.++|+|| |.|++-.-..+
T Consensus 159 sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y 195 (300)
T 3eld_A 159 SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY 195 (300)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc
Confidence 1111111 12344446899999 99999865533
No 313
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.00 E-value=0.00014 Score=71.56 Aligned_cols=97 Identities=24% Similarity=0.269 Sum_probs=63.6
Q ss_pred CeeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhh----cccc--chhhccccCCCCCCCccchhhcccccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIY----DRGL--VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~----~RGL--ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
.-..|+|+++|.|.++.+|....- .|+-++- +.-|...- .+|+ |-..+.=.+.++.-+.+||+|.+..+|
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhh
Confidence 345899999999999999987532 4444443 23332222 2232 112221123355445899999999888
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..+.+ ...+|-+|-|+|||||+++|.+
T Consensus 114 ~~~~d----~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 114 HHFPN----PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhcCC----HHHHHHHHHHHcCCCCEEEEEE
Confidence 77653 2467899999999999999964
No 314
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.00 E-value=0.0001 Score=71.73 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=64.1
Q ss_pred eeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhhccc----cch-hhccccCCCCCCCccchhhccccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIYDRG----LVG-IYHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~~RG----Lig-~yhdwce~f~typrTyDLlHa~~lfs 619 (689)
-..|+|+++|.|.++..|... .. +|+-++- +..+...-.+. -|- +..|.. .++.-+.+||+|++.++|.
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDIL-TKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT-TCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc-cCCCCCCcEEEEeHHHHHH
Confidence 357999999999999999765 32 2333332 23333333332 122 222333 3454578999999999988
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.... -+ ...+|-++-|+|+|||.++|.+
T Consensus 132 ~~~~-~~-~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 132 ALSL-EN-KNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GSCH-HH-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCh-HH-HHHHHHHHHHHcCCCCEEEEEE
Confidence 7632 22 2467899999999999999985
No 315
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.96 E-value=0.00062 Score=65.22 Aligned_cols=114 Identities=14% Similarity=0.180 Sum_probs=69.5
Q ss_pred hHHHHHHHHHhhhcccCCCCCCeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----cc-chhhccc
Q 044932 525 TRHWKAIVDRSYLTGLGIDWSKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GL-VGIYHDW 598 (689)
Q Consensus 525 ~~~W~~~v~~~y~~~l~~~~~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GL-ig~yhdw 598 (689)
...|...+.+ ++..... .-..|||+++|.|.++..|..... +|+-++.. ..+...-.+ |+ +-+++.=
T Consensus 20 ~~~~~~~~~~-~l~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d 92 (246)
T 1y8c_A 20 YKKWSDFIIE-KCVENNL---VFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHH-HHHTTTC---CTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCC
T ss_pred HHHHHHHHHH-HHHHhCC---CCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecc
Confidence 3456666653 3332211 234799999999999999987643 34444432 333222222 21 1112211
Q ss_pred cCCCCCCCccchhhcccc-ccccccCCcCCccceeeeeccccccCcEEEE
Q 044932 599 CESFGTYPRSYDLLHADH-LFSRLKSRCRQPVSIVVEMDRILRPGGWAIV 647 (689)
Q Consensus 599 ce~f~typrTyDLlHa~~-lfs~~~~~c~~~~~illEmDRILRP~G~~ii 647 (689)
.+.++ +|.+||+|.+.+ +|....+.-. +..+|-+|-|+|+|||.+++
T Consensus 93 ~~~~~-~~~~fD~v~~~~~~l~~~~~~~~-~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 93 ISNLN-INRKFDLITCCLDSTNYIIDSDD-LKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGCC-CSCCEEEEEECTTGGGGCCSHHH-HHHHHHHHHTTEEEEEEEEE
T ss_pred cccCC-ccCCceEEEEcCccccccCCHHH-HHHHHHHHHHhcCCCcEEEE
Confidence 22233 458999999998 8887643334 35688999999999999998
No 316
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.95 E-value=0.0013 Score=66.95 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=36.9
Q ss_pred CcceEEecccc---cc--ccccHHHHHHHHHhccCCCcEEEEEcCCCchhHHHHHHHHHHhcceeEEEe
Q 044932 372 VFDAIHCDGCS---IT--WHAHGGKLLLEMNRILRPSGYFILSTKHDSIEEEEALTTLTASICWNILAH 435 (689)
Q Consensus 372 SFDlVhcs~cl---i~--W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~le~~~~ie~La~~l~W~~v~~ 435 (689)
.||+|+.-... .+ |. ..+|.++.|+|||||+|+.-.... .+...+...+|.+...
T Consensus 173 ~~D~iflD~fsp~~~p~lw~---~~~l~~l~~~L~pGG~l~tysaa~------~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWT---QNLFNAMARLARPGGTLATFTSAG------FVRRGLQEAGFTMQKR 232 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCC---HHHHHHHHHHEEEEEEEEESCCBH------HHHHHHHHHTEEEEEE
T ss_pred eEEEEEECCCCcccChhhcC---HHHHHHHHHHcCCCcEEEEEeCCH------HHHHHHHHCCCEEEeC
Confidence 79999863211 11 22 379999999999999998644322 2555666678987643
No 317
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=96.95 E-value=9e-05 Score=78.52 Aligned_cols=138 Identities=9% Similarity=0.123 Sum_probs=89.1
Q ss_pred hhhHHHHHHHHH---hhhcccCCCCCCeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccccchhhc--
Q 044932 523 SDTRHWKAIVDR---SYLTGLGIDWSKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRGLVGIYH-- 596 (689)
Q Consensus 523 ~D~~~W~~~v~~---~y~~~l~~~~~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RGLig~yh-- 596 (689)
..+..|..+... ..+..+.+.. =..|+|+++|.|.|+.+|..... +|+=++-. +.+...-.+|+-....
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~--~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~ 157 (416)
T 4e2x_A 83 SGSSVMREHFAMLARDFLATELTGP--DPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFF 157 (416)
T ss_dssp GGCHHHHHHHHHHHHHHHHTTTCSS--SCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCC
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCC--CCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeee
Confidence 344566666542 2334444433 34799999999999999988754 45555543 4555555564322111
Q ss_pred --cccCCCCCCCccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeCch----------h----------hH
Q 044932 597 --DWCESFGTYPRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV----------E----------IL 654 (689)
Q Consensus 597 --dwce~f~typrTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~----------~----------~l 654 (689)
+-.+.++.-+.+||+|.+.++|.... + +..+|-++-|+|+|||.++|.... + ..
T Consensus 158 ~~~~~~~l~~~~~~fD~I~~~~vl~h~~---d-~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 233 (416)
T 4e2x_A 158 EKATADDVRRTEGPANVIYAANTLCHIP---Y-VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSA 233 (416)
T ss_dssp SHHHHHHHHHHHCCEEEEEEESCGGGCT---T-HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCH
T ss_pred chhhHhhcccCCCCEEEEEECChHHhcC---C-HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCH
Confidence 11122222358999999999999886 3 366899999999999999997321 0 23
Q ss_pred HHHHHHHhhcceeEE
Q 044932 655 DPLEGILRSLHWEIR 669 (689)
Q Consensus 655 ~~v~~i~~~lrW~~~ 669 (689)
..++.++....+++.
T Consensus 234 ~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 234 TSVQGMAQRCGFELV 248 (416)
T ss_dssp HHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 567777777777653
No 318
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.92 E-value=0.00016 Score=68.83 Aligned_cols=98 Identities=16% Similarity=0.299 Sum_probs=65.5
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----ccc-------chhhccccCCCCCCCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGL-------VGIYHDWCESFGTYPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGL-------ig~yhdwce~f~typrTyDLlHa~ 615 (689)
..|+|+++|.|.++.+|..... +|+-++- +..+...-. .|+ +-+...=.+.++.-+.+||+|.+.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4699999999999999987743 3444443 222222222 333 222222233455557899999999
Q ss_pred cccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 616 HLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
++|....+.-.. ..+|-++-|+|||||.++|.+
T Consensus 109 ~~l~~~~~~~~~-~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 109 AFLTSVPDPKER-SRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp SCGGGCCCHHHH-HHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCCCHHHH-HHHHHHHHHHcCCCeEEEEEE
Confidence 998877654431 367889999999999999974
No 319
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.91 E-value=0.00035 Score=68.02 Aligned_cols=122 Identities=12% Similarity=0.104 Sum_probs=73.7
Q ss_pred CeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----c------------------------------
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----G------------------------------ 590 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----G------------------------------ 590 (689)
.-..|||+++|.|.++..|..... -+|+-++-. ..|...-.+ +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 346799999999999988876543 245544432 222222111 1
Q ss_pred -cc-hh-hccccCCCCCCC---ccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeCchh------------
Q 044932 591 -LV-GI-YHDWCESFGTYP---RSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE------------ 652 (689)
Q Consensus 591 -Li-g~-yhdwce~f~typ---rTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~------------ 652 (689)
-| -+ -.|..+..+..+ .+||+|.+..+|......-..+..+|-+|-|+|+|||++++.+...
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 02 11 123333222233 7999999998887433221113567889999999999999976211
Q ss_pred ----hHHHHHHHHhhcceeEE
Q 044932 653 ----ILDPLEGILRSLHWEIR 669 (689)
Q Consensus 653 ----~l~~v~~i~~~lrW~~~ 669 (689)
-...+..++....+.+.
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEE
T ss_pred ccccCHHHHHHHHHHCCCEEE
Confidence 23377777776667653
No 320
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.91 E-value=0.00032 Score=73.09 Aligned_cols=39 Identities=13% Similarity=0.334 Sum_probs=31.6
Q ss_pred CCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc
Q 044932 309 IRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER 352 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR 352 (689)
..+|||+|||+|.++.+++.. .|+++|+++ .|++.|.++
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~-----~al~~A~~~ 69 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDS-----EVLRIAEEK 69 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCH-----HHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCH-----HHHHHHHHH
Confidence 468999999999998887753 589999876 577777765
No 321
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.88 E-value=0.00039 Score=66.62 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=61.4
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccc-cchhhccccCCCCCCCccchhhc-cccccccccC
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRG-LVGIYHDWCESFGTYPRSYDLLH-ADHLFSRLKS 623 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RG-Lig~yhdwce~f~typrTyDLlH-a~~lfs~~~~ 623 (689)
-..|+|+++|.|.++..|..... +|+-++. +..+...-.+. =+-+++.=.+.++. +.+||+|. +.++|....+
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 35799999999999999876532 3444443 23333332221 01122211223443 78999999 4557766544
Q ss_pred CcCCccceeeeeccccccCcEEEEeC
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.-. +..+|-++-|+|+|||.++|.+
T Consensus 117 ~~~-~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 117 TEE-LGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHH-HHHHHHHHHHTEEEEEEEEECC
T ss_pred HHH-HHHHHHHHHHhcCCCeEEEEEe
Confidence 334 2568899999999999999974
No 322
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.86 E-value=0.0041 Score=67.18 Aligned_cols=84 Identities=13% Similarity=0.154 Sum_probs=55.5
Q ss_pred CCCeEEEECCccchhHHHhhcCC--eEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEeccccccc
Q 044932 308 NIRVVLEIGSADLSFVASLLAKE--VLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHCDGCSITW 385 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La~~~--V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhcs~cli~W 385 (689)
++.+|||+||.+|+|+..|++++ |+++|..+-+. . ....+ ...+...|+..+..+.+.||+|+|-...
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~--~----l~~~~-~V~~~~~d~~~~~~~~~~~D~vvsDm~~--- 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQ--S----LMDTG-QVTWLREDGFKFRPTRSNISWMVCDMVE--- 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCH--H----HHTTT-CEEEECSCTTTCCCCSSCEEEEEECCSS---
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcCh--h----hccCC-CeEEEeCccccccCCCCCcCEEEEcCCC---
Confidence 46899999999999999998775 88898876322 1 11111 2234445555666667889999986432
Q ss_pred cccHHHHHHHHHhccCCC
Q 044932 386 HAHGGKLLLEMNRILRPS 403 (689)
Q Consensus 386 ~~d~~~aL~EI~RVLRPG 403 (689)
++..++.-+.+.|..|
T Consensus 281 --~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 281 --KPAKVAALMAQWLVNG 296 (375)
T ss_dssp --CHHHHHHHHHHHHHTT
T ss_pred --ChHHhHHHHHHHHhcc
Confidence 3455666666655554
No 323
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.85 E-value=0.00022 Score=68.70 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=76.9
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcccc---chhhccccCCCCCCCccchhhccccccccccC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSRLKS 623 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~~~~ 623 (689)
..|+|+++|.|.++.+|..... +|+-++- +..+...-.++. |-+.+.-.+.++.-+.+||+|.+.++|....+
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 131 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEE 131 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSC
T ss_pred CeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccC
Confidence 3799999999999999988754 3444443 234444444421 11222222345545789999999999887643
Q ss_pred CcCCccceeeeeccccccCcEEEEeCch----------------------hhHHHHHHHHhhcceeEE
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRDKV----------------------EILDPLEGILRSLHWEIR 669 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD~~----------------------~~l~~v~~i~~~lrW~~~ 669 (689)
...+|-++-|+|+|||.++|.+.. .....++.++....+++.
T Consensus 132 ----~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 132 ----PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred ----HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 245789999999999999997511 123467788877778754
No 324
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=96.85 E-value=0.00015 Score=72.25 Aligned_cols=97 Identities=16% Similarity=0.302 Sum_probs=64.6
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----ccchhh-------ccccCCCC---CCCccchhh
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GLVGIY-------HDWCESFG---TYPRSYDLL 612 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GLig~y-------hdwce~f~---typrTyDLl 612 (689)
..|||+++|.|.++..|..... +|+-++-. ..|.....+ +.-+.+ .|+. .++ ..+.+||+|
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDAV 134 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEEE
Confidence 5799999999999999988754 56666543 344333222 111111 1111 112 346899999
Q ss_pred ccc-cccccccC----CcCCccceeeeeccccccCcEEEEeC
Q 044932 613 HAD-HLFSRLKS----RCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 613 Ha~-~lfs~~~~----~c~~~~~illEmDRILRP~G~~iirD 649 (689)
++. .+|....+ .-. ...+|-++-|+|+|||+++|..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSE-HRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EECTTCGGGSCCSSSSSHH-HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHH-HHHHHHHHHHHcCCCeEEEEEe
Confidence 998 67776655 233 2567899999999999999874
No 325
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.85 E-value=0.00016 Score=71.48 Aligned_cols=95 Identities=19% Similarity=0.306 Sum_probs=62.7
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhc----ccc--chhhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYD----RGL--VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~----RGL--ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++..|... ..- |+-++. +..+...-. .|+ +-+...=.+.++.-+.+||+|++..+|
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~---v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDAE---ITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTSE---EEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCE---EEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 57999999999999998764 222 333332 222322222 232 222222233455557899999999998
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
....+. ..+|-+|-|+|+|||+++|.+
T Consensus 116 ~~~~~~----~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 116 EHLQSP----EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCCH----HHHHHHHHHHcCCCcEEEEEE
Confidence 876543 457889999999999999975
No 326
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.84 E-value=0.0014 Score=59.84 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=70.9
Q ss_pred eeEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhh----cccc---chhhccccCCCCCCCccchhhccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIY----DRGL---VGIYHDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~----~RGL---ig~yhdwce~f~typrTyDLlHa~~l 617 (689)
-..|+|+++|.|.++..|... +-. .|+-++-. ..+...- ..|+ +-+..|..+.|+..+.+||+|.+.+.
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQT--TAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSE--EEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCC--eEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc
Confidence 357999999999999988765 221 23333322 2332222 2233 22223444566655589999998877
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhcceeE
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWEI 668 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~~ 668 (689)
+.. ..+|-++-|+|+|||.+++.+- .+-...+..+.....+++
T Consensus 104 ~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 104 LTA--------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTI 147 (178)
T ss_dssp TTC--------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEE
T ss_pred ccH--------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCee
Confidence 754 2478889999999999999753 445556666666665554
No 327
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.84 E-value=0.00026 Score=68.83 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=62.5
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc------ccchhhccccCCCCCCCccchhhccccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR------GLVGIYHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R------GLig~yhdwce~f~typrTyDLlHa~~lfs 619 (689)
-..|+|+++|.|.++..|..... +|+-++-. ..+...-.+ .+--+..|+ +.++.-+.+||+|++..+|.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchh
Confidence 35799999999999999987643 34444332 233322222 111122233 44554467999999998887
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEe
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
...+ ...+|-+|-|+|+|||++++.
T Consensus 116 ~~~~----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPD----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTT----HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC----HHHHHHHHHHHCCCCcEEEEE
Confidence 6653 256789999999999999885
No 328
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=96.82 E-value=0.00019 Score=72.57 Aligned_cols=103 Identities=12% Similarity=0.184 Sum_probs=67.7
Q ss_pred hcccCCCCCCeeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhh----ccccch---hh-ccccCCCCCCC
Q 044932 537 LTGLGIDWSKIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIY----DRGLVG---IY-HDWCESFGTYP 606 (689)
Q Consensus 537 ~~~l~~~~~~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~----~RGLig---~y-hdwce~f~typ 606 (689)
+..+.+..+ ..|+|+++|.|+++..|... +. +|+-++- +..+...- ..|+-+ +. .|+. .| +
T Consensus 65 ~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~ 135 (302)
T 3hem_A 65 LDKLNLEPG--MTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---D 135 (302)
T ss_dssp HHTTCCCTT--CEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GC---C
T ss_pred HHHcCCCCc--CEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHH-Hc---C
Confidence 334445443 47999999999999999775 53 3444443 23333322 234321 22 2332 22 8
Q ss_pred ccchhhccccccccccCC------cCCccceeeeeccccccCcEEEEeC
Q 044932 607 RSYDLLHADHLFSRLKSR------CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 607 rTyDLlHa~~lfs~~~~~------c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+||+|.+.++|....+. -. ...+|-++-|+|+|||.++|.+
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFER-YDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTH-HHHHHHHHHHSSCTTCEEEEEE
T ss_pred CCccEEEEcchHHhcCccccccchhH-HHHHHHHHHHhcCCCcEEEEEE
Confidence 999999999999877443 22 2567899999999999999975
No 329
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=96.82 E-value=0.00039 Score=68.90 Aligned_cols=95 Identities=20% Similarity=0.198 Sum_probs=63.0
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-CchhhhhccccchhhccccCCCCCCCccchhhccccccccccCCc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRC 625 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c 625 (689)
-..|||+++|.|.++..|.+... +|+-++-. ..+...-.+.-+-..+.=++.++.-+.+||+||+.++|..+.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--- 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFS--- 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCS---
T ss_pred CCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhcc---
Confidence 36799999999999999987543 23333321 122211122222233333455665668999999999988773
Q ss_pred CCccceeeeeccccccCcEEEEeC
Q 044932 626 RQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 626 ~~~~~illEmDRILRP~G~~iirD 649 (689)
+ ...+|-++-|+|+ ||+++|-+
T Consensus 109 ~-~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 109 H-LEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp S-HHHHHHHHHHHBC-SSCEEEEE
T ss_pred C-HHHHHHHHHHHhC-CcEEEEEE
Confidence 3 2567999999999 99777754
No 330
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.81 E-value=0.00057 Score=63.98 Aligned_cols=156 Identities=14% Similarity=0.046 Sum_probs=85.2
Q ss_pred hhhHHHHHHHHHhhhcccCCCCCCeeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhh----hhcccc--chh
Q 044932 523 SDTRHWKAIVDRSYLTGLGIDWSKIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPV----IYDRGL--VGI 594 (689)
Q Consensus 523 ~D~~~W~~~v~~~y~~~l~~~~~~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~v----I~~RGL--ig~ 594 (689)
.++..|...+-. ++..+ ..=..|+|+++|.|.++.+|... +-+ +|+-++- +..+.. +...|+ -=+
T Consensus 12 ~~~~~~~~~~~~-~l~~~----~~~~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 84 (215)
T 4dzr_A 12 PDTEVLVEEAIR-FLKRM----PSGTRVIDVGTGSGCIAVSIALACPGV--SVTAVDLSMDALAVARRNAERFGAVVDWA 84 (215)
T ss_dssp HHHHHHHHHHHH-HHTTC----CTTEEEEEEESSBCHHHHHHHHHCTTE--EEEEEECC-------------------CC
T ss_pred ccHHHHHHHHHH-Hhhhc----CCCCEEEEecCCHhHHHHHHHHhCCCC--eEEEEECCHHHHHHHHHHHHHhCCceEEE
Confidence 456666666643 22211 22357999999999999888764 111 2333322 111111 111121 122
Q ss_pred hccccCCCCC---CCccchhhccccccccccCC-------------cC---------CccceeeeeccccccCcE-EEEe
Q 044932 595 YHDWCESFGT---YPRSYDLLHADHLFSRLKSR-------------CR---------QPVSIVVEMDRILRPGGW-AIVR 648 (689)
Q Consensus 595 yhdwce~f~t---yprTyDLlHa~~lfs~~~~~-------------c~---------~~~~illEmDRILRP~G~-~iir 648 (689)
..|+.+.|+. .+.+||+|-++.-|...... .. ++..++-++-|+|+|||. +++.
T Consensus 85 ~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 85 AADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred EcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3355553332 23799999986544321110 00 014577899999999999 7776
Q ss_pred CchhhHHHHHHHHh--hcceeE-EE-eecCCCceEEEEEec
Q 044932 649 DKVEILDPLEGILR--SLHWEI-RM-TYAQDKEGILCAQKT 685 (689)
Q Consensus 649 D~~~~l~~v~~i~~--~lrW~~-~~-~~~~~~E~iL~~~K~ 685 (689)
-...-...+..++. ...|.. .+ .+..+.+++++++|.
T Consensus 165 ~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 165 VGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp CTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEEC
T ss_pred ECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEc
Confidence 55556677777777 555643 22 244556889998874
No 331
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.79 E-value=0.0043 Score=61.55 Aligned_cols=93 Identities=13% Similarity=-0.014 Sum_probs=54.2
Q ss_pred CCeEEEECCccchhHHHhh---cCCeEEEEcCCcccHHHHHHHHHHcCC--C--cEEecCCCCC---------------C
Q 044932 309 IRVVLEIGSADLSFVASLL---AKEVLTLTVGLKDDLVDLAQVALERGF--P--AVVSPLGNRR---------------L 366 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La---~~~V~gmDIsp~D~seamlq~A~eRGL--~--~i~~~~dt~~---------------L 366 (689)
.++||++|||.. +..|+ +..|++++.++.-. ..+.+...+.|+ . ..+...++.. +
T Consensus 31 a~~VLEiGtGyS--Tl~lA~~~~g~VvtvE~d~~~~-~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSGGS--TVVAAELPGKHVTSVESDRAWA-RMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCSHH--HHHHHTSTTCEEEEEESCHHHH-HHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECchHH--HHHHHHcCCCEEEEEeCCHHHH-HHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 579999999743 33333 34588999877422 222222333465 2 2233333211 2
Q ss_pred C--------C-CCCCcceEEeccccccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 367 P--------F-PSGVFDAIHCDGCSITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 367 P--------F-pD~SFDlVhcs~cli~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
+ + ..++||+|+.-.- .....+....+.|||||++++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEeC
Confidence 2 2 2378999987531 11256666779999999997765
No 332
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.79 E-value=0.00018 Score=68.34 Aligned_cols=115 Identities=16% Similarity=0.149 Sum_probs=76.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc-ccchhhccccCCCCCCCccchhhccccccccccCCc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR-GLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRC 625 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R-GLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c 625 (689)
..|||+++|.|.++..|..... +|+-++. +..+...-.+ ++--+..|. +.++ .+.+||+|.+.++|..... -
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~-~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVPR-D 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSCH-H
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcCH-H
Confidence 4799999999999999987753 3444443 2334333333 222222232 3344 6789999999998876542 1
Q ss_pred CCccceeeeeccccccCcEEEEeCch---------------hhHHHHHHHHhhcc-eeEE
Q 044932 626 RQPVSIVVEMDRILRPGGWAIVRDKV---------------EILDPLEGILRSLH-WEIR 669 (689)
Q Consensus 626 ~~~~~illEmDRILRP~G~~iirD~~---------------~~l~~v~~i~~~lr-W~~~ 669 (689)
. +..+|-++-|+|+|||.++|.... --...++.++.... |+..
T Consensus 119 ~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 119 E-LADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp H-HHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred H-HHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 2 246789999999999999997321 14667778887776 7653
No 333
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.77 E-value=0.00021 Score=71.37 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=64.5
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----ccc---chhhccccCCCC-CCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGL---VGIYHDWCESFG-TYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGL---ig~yhdwce~f~-typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++..|..... +|+-++- +..|...-. .|+ |-+++.=.+.++ ..+.+||+|.+.++|
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 4699999999999999987754 3444433 233333222 243 222332233344 456899999999999
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
....+. ..+|-++-|+|+|||.++|.+
T Consensus 147 ~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 147 EWVADP----RSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGCSCH----HHHHHHHHHTEEEEEEEEEEE
T ss_pred hcccCH----HHHHHHHHHHcCCCeEEEEEE
Confidence 877432 457899999999999999975
No 334
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.77 E-value=0.0018 Score=63.46 Aligned_cols=129 Identities=17% Similarity=0.195 Sum_probs=76.4
Q ss_pred eEEeecCCcchhHHHHhc--cCCceEEEeccCCCC-Cchhhh----hcccc--chhhccccCCCCC---CCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALA--QQKIWVMNVVPVHAP-DTLPVI----YDRGL--VGIYHDWCESFGT---YPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~--~~~vWVMNvvp~~~~-~tL~vI----~~RGL--ig~yhdwce~f~t---yprTyDLlHa~ 615 (689)
..|+|+++|.|.++..|. .... .|+-++.. .-+.+. -..|+ |-+++.=.+.++. ++.+||+|.+.
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 579999999998887776 3322 23333332 222222 22244 3333322233332 36789999987
Q ss_pred cccccccCCcCCccceeeeeccccccCcEEEEeCc---hhhHHHHHHHHhhcceeEEEe---ecC---CCceEEEEEecc
Q 044932 616 HLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK---VEILDPLEGILRSLHWEIRMT---YAQ---DKEGILCAQKTM 686 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~---~~~l~~v~~i~~~lrW~~~~~---~~~---~~E~iL~~~K~~ 686 (689)
.+ .. +..++-++-|+|+|||.+++-+. .+-+..+...+....+..... ... ..-.+++++|.=
T Consensus 149 ~~-------~~-~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~ 220 (240)
T 1xdz_A 149 AV-------AR-LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIK 220 (240)
T ss_dssp CC-------SC-HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred cc-------CC-HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecC
Confidence 63 23 36688889999999999998753 334556666677777765322 111 223466667654
Q ss_pred C
Q 044932 687 W 687 (689)
Q Consensus 687 w 687 (689)
.
T Consensus 221 ~ 221 (240)
T 1xdz_A 221 N 221 (240)
T ss_dssp C
T ss_pred C
Confidence 3
No 335
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=96.76 E-value=0.00022 Score=71.66 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=62.2
Q ss_pred CeeEEeecCCcchhHHHHhccC---CceEEEeccCCC-CCchhhhh----cccc-chhhccccCCCCCCCccchhhcccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHA-PDTLPVIY----DRGL-VGIYHDWCESFGTYPRSYDLLHADH 616 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~-~~tL~vI~----~RGL-ig~yhdwce~f~typrTyDLlHa~~ 616 (689)
.-.+|+|+++|.|.++..|.+. ..- |+-++- +..+...- ..|+ |-+++.=.+.++ +|.+||+||+.+
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~ 97 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSK---YTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAICHA 97 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCE---EEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-cCCCeeEEEECC
Confidence 3468999999999999999865 222 222222 11111111 1121 112222233344 488999999999
Q ss_pred ccccccCCcCCccceeeeeccccccCcEEEEeCch
Q 044932 617 LFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV 651 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~ 651 (689)
+|....+. ..+|-++-|+|+|||++++.+..
T Consensus 98 ~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMTTP----ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCSSH----HHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCCCH----HHHHHHHHHHcCCCCEEEEEecc
Confidence 98876433 45788999999999999987643
No 336
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.76 E-value=0.00029 Score=68.72 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=63.7
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccc---cchhhccccCCCCCCCccchhhcccccccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRG---LVGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RG---Lig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
=..|||+++|.|.++..|.....- +|+-++- +..+...-.+. -|-+...=.+.++.-+.+||+|.+.++|....
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 357999999999999999876431 3444443 22333332221 11111111234555568999999999988773
Q ss_pred CCcCCccceeeeeccccccCcEEEEe
Q 044932 623 SRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 623 ~~c~~~~~illEmDRILRP~G~~iir 648 (689)
+ +..+|-++-|+|+|||.++|.
T Consensus 123 ~----~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 123 S----FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp C----HHHHHHHHHHHEEEEEEEEEE
T ss_pred h----HHHHHHHHHHHcCCCcEEEEE
Confidence 3 256789999999999999996
No 337
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.75 E-value=0.00053 Score=68.32 Aligned_cols=95 Identities=13% Similarity=0.196 Sum_probs=62.0
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccc-cchhhccccCCCCCCCccchhhccccccccccCC
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRG-LVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSR 624 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RG-Lig~yhdwce~f~typrTyDLlHa~~lfs~~~~~ 624 (689)
-..|+|+++|.|.++.+|..... +|+-++- +..+...-.+. -+-+.+.=.+.++ ++.+||+|++..+|....
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~-- 131 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAMLHWVK-- 131 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESCGGGCS--
T ss_pred CCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcchhhhCc--
Confidence 35799999999999999987443 2333332 22333222221 0111221223355 488999999999887654
Q ss_pred cCCccceeeeeccccccCcEEEEeC
Q 044932 625 CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 625 c~~~~~illEmDRILRP~G~~iirD 649 (689)
+ ...+|-+|-|+|||||+++|..
T Consensus 132 -d-~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 132 -E-PEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp -C-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -C-HHHHHHHHHHhcCCCcEEEEEe
Confidence 3 2567899999999999999963
No 338
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.74 E-value=0.00042 Score=65.04 Aligned_cols=135 Identities=15% Similarity=0.111 Sum_probs=77.8
Q ss_pred EEeecCCcchhHHHHhccC--CceEEEeccCCCC-Cchhhh----hcccc---chhhccccCCCC-CCCccchhhccccc
Q 044932 549 NVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAP-DTLPVI----YDRGL---VGIYHDWCESFG-TYPRSYDLLHADHL 617 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~-~tL~vI----~~RGL---ig~yhdwce~f~-typrTyDLlHa~~l 617 (689)
.|+|+++|.|.++.+|... +-- +|+-++.. ..+... -..|+ |-+.+.=.+.++ ..+.+||+|-++..
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred EEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 7999999999999888754 211 34444432 333222 22233 222222222333 45689999998765
Q ss_pred cccccCCc------CCccceeeeeccccccCcEEEEeC------chhhHHHHHHHHhhc---ceeEEEeec----CCCce
Q 044932 618 FSRLKSRC------RQPVSIVVEMDRILRPGGWAIVRD------KVEILDPLEGILRSL---HWEIRMTYA----QDKEG 678 (689)
Q Consensus 618 fs~~~~~c------~~~~~illEmDRILRP~G~~iirD------~~~~l~~v~~i~~~l---rW~~~~~~~----~~~E~ 678 (689)
|-...+.. . ...+|-++-|+|+|||.+++-. ...-...+...+..+ .|.+..... ..+..
T Consensus 103 ~~~~~~~~~~~~~~~-~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~ 181 (197)
T 3eey_A 103 YLPSGDHSISTRPET-TIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPI 181 (197)
T ss_dssp BCTTSCTTCBCCHHH-HHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCE
T ss_pred cccCcccccccCccc-HHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCe
Confidence 51111111 1 1347889999999999999874 122345555666555 487765421 23556
Q ss_pred EEEEEecc
Q 044932 679 ILCAQKTM 686 (689)
Q Consensus 679 iL~~~K~~ 686 (689)
+++.+|..
T Consensus 182 ~~~~~~~~ 189 (197)
T 3eey_A 182 LVCIEKIS 189 (197)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 77777753
No 339
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.71 E-value=0.00066 Score=62.19 Aligned_cols=112 Identities=21% Similarity=0.221 Sum_probs=71.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhc----ccc---ch-hhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYD----RGL---VG-IYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~----RGL---ig-~yhdwce~f~typrTyDLlHa~~lf 618 (689)
.+|+|+++|.|.++..|.... -+|+-++.. ..+...-. .|+ +- +..|+.+.++.. .+||+|-+++.+
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 489999999999998887764 234444332 22222211 222 11 122333323322 389999888766
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEEE
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~~ 670 (689)
.. +..+|-++-|+|+|||.+++-+ ....+..+..++....|++..
T Consensus 111 ~~-------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 111 GE-------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp TC-------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred HH-------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 32 2567889999999999998875 456777888888776665443
No 340
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.71 E-value=0.00033 Score=66.34 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=61.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccc-cchhhccccCCCCCCCccchhhccccccccccCCc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRG-LVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRC 625 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RG-Lig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c 625 (689)
.+|+|+++|.|.++..| ... +|+-++-. ..+...-.+. -+-+.+.-.+.++.-+.+||+|.+.++|....
T Consensus 38 ~~vLdiG~G~G~~~~~l-~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--- 109 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL-PYP----QKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE--- 109 (211)
T ss_dssp SEEEEETCTTCHHHHHC-CCS----EEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS---
T ss_pred CeEEEECCCCCHhHHhC-CCC----eEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC---
Confidence 47999999999999998 220 23333322 2333333321 12222222334554567999999999887664
Q ss_pred CCccceeeeeccccccCcEEEEeC
Q 044932 626 RQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 626 ~~~~~illEmDRILRP~G~~iirD 649 (689)
+ ...+|-+|-|+|+|||.++|.+
T Consensus 110 ~-~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 110 D-VERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp C-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-HHHHHHHHHHHcCCCCEEEEEe
Confidence 3 3568999999999999999974
No 341
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.66 E-value=0.00065 Score=68.94 Aligned_cols=134 Identities=15% Similarity=0.059 Sum_probs=83.5
Q ss_pred eEEeecCCcchhHHHHhc--cCCceEEEeccCCC-CCchhhh----hcccc---chhhccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALA--QQKIWVMNVVPVHA-PDTLPVI----YDRGL---VGIYHDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~--~~~vWVMNvvp~~~-~~tL~vI----~~RGL---ig~yhdwce~f~typrTyDLlHa~~l 617 (689)
..|+|+++|.|.++.+|. ..+-. +|+-++- +..+... -..|+ |-+++.=.+.++ ++.+||+|.+.++
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD-TREGYDLLTSNGL 196 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC-CCSCEEEEECCSS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC-ccCCeEEEEECCh
Confidence 469999999999999984 33322 2333332 2222222 22333 222222222233 4599999999998
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeCch---------------------------------------hhHHHHH
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV---------------------------------------EILDPLE 658 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD~~---------------------------------------~~l~~v~ 658 (689)
|....+.-.. ..+|-++-|+|+|||.++|.+-. .....+.
T Consensus 197 ~~~~~~~~~~-~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 197 NIYEPDDARV-TELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp GGGCCCHHHH-HHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhcCCHHHH-HHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 8776544331 34788999999999999998711 2367788
Q ss_pred HHHhhcceeEEEee--cCCCceEEEEEec
Q 044932 659 GILRSLHWEIRMTY--AQDKEGILCAQKT 685 (689)
Q Consensus 659 ~i~~~lrW~~~~~~--~~~~E~iL~~~K~ 685 (689)
.++..-.++..-.. ....-..++|+|.
T Consensus 276 ~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 88888888764432 2223457888874
No 342
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.65 E-value=0.00042 Score=65.40 Aligned_cols=124 Identities=8% Similarity=0.028 Sum_probs=74.1
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhh----cccc--chhhc-cccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIY----DRGL--VGIYH-DWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~----~RGL--ig~yh-dwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++.+|... +-. +|+-++. +..+...- ..|+ |-+++ |+.+ +. .+.+||+|.+.++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA--HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 37999999999998888753 221 2333332 12222221 2243 22222 3322 22 2468999987653
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeCchhhHHHHHHHHhhcceeEEE----e--ecCCCceEEEEEec
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGILRSLHWEIRM----T--YAQDKEGILCAQKT 685 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~~~lrW~~~~----~--~~~~~E~iL~~~K~ 685 (689)
.. +..++-++-|+|+|||++++-.....-..++.+.. .|+... . +......++++.|+
T Consensus 142 ------~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ------AS-LNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ------SS-HHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ------CC-HHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 22 35678889999999999999876666677777776 565432 1 12334667777764
No 343
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.64 E-value=0.00051 Score=69.95 Aligned_cols=104 Identities=12% Similarity=-0.012 Sum_probs=66.3
Q ss_pred hhcccC-CCCCCeeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhh----hccccc---hhhccccCCCCCC
Q 044932 536 YLTGLG-IDWSKIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVI----YDRGLV---GIYHDWCESFGTY 605 (689)
Q Consensus 536 y~~~l~-~~~~~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI----~~RGLi---g~yhdwce~f~ty 605 (689)
++..+. +. .-..|||+++|.|.|+..|... .. .|+-++- +.-+... -..|+- -+++.=.+.++.-
T Consensus 108 l~~~l~~~~--~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 108 LMDHLGQAG--PDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHTTSCCCC--TTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHHhccCC--CCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC
Confidence 444444 43 3357999999999999998765 32 2333332 2223222 223432 2222222344433
Q ss_pred CccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 606 PRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 606 prTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+.+||+|.+.++|... + ...+|-++-|+|+|||.++|-+
T Consensus 183 ~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 183 KGAVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp TTCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEEEE
Confidence 4899999999988876 3 2678999999999999999874
No 344
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.62 E-value=0.00062 Score=64.55 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=75.1
Q ss_pred cCCCCCCeeEEeecCCcchhHHHHhccCC-ceEEEeccCCC-CCchhhhhc----ccc--ch-hhccccCCCCCCCccch
Q 044932 540 LGIDWSKIRNVMDMKSIYGGFAAALAQQK-IWVMNVVPVHA-PDTLPVIYD----RGL--VG-IYHDWCESFGTYPRSYD 610 (689)
Q Consensus 540 l~~~~~~iRNvmDMna~~GgFAAal~~~~-vWVMNvvp~~~-~~tL~vI~~----RGL--ig-~yhdwce~f~typrTyD 610 (689)
+.+..+ ..|+|+++|.|.++.+|.... -. +|+-++- +..+...-+ .|+ |- +..|..+.++.. .+||
T Consensus 36 l~~~~~--~~vLDiG~G~G~~~~~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D 110 (204)
T 3e05_A 36 LRLQDD--LVMWDIGAGSASVSIEASNLMPNG--RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPD 110 (204)
T ss_dssp TTCCTT--CEEEEETCTTCHHHHHHHHHCTTS--EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCS
T ss_pred cCCCCC--CEEEEECCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCC
Confidence 444433 579999999999999887542 11 2333332 223322222 233 11 122333433322 5799
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEEE
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~~ 670 (689)
+|-+++.+. . +..+|-++-|+|+|||.+++.. ..+-...+..++....|++.+
T Consensus 111 ~i~~~~~~~------~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 111 RVFIGGSGG------M-LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp EEEESCCTT------C-HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCCc------C-HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeE
Confidence 998877664 3 3678899999999999999984 446778888888888886544
No 345
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.61 E-value=0.023 Score=59.45 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=70.1
Q ss_pred HHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHc------C----CCc
Q 044932 291 HYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALER------G----FPA 356 (689)
Q Consensus 291 ~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eR------G----L~~ 356 (689)
.|.+.|.. +|.+.. +..++||=||-|.|+.+..++.. .|+.++|+| ..++.|++. + -..
T Consensus 68 ~YhE~l~h-~~l~~~-p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~-----~Vv~~a~~~lp~~~~~~~~dpRv 140 (294)
T 3o4f_A 68 IYHEMMTH-VPLLAH-GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-----GVVSFCRQYLPNHNAGSYDDPRF 140 (294)
T ss_dssp HHHHHHHH-HHHHHS-SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCH-----HHHHHHHHHCHHHHTTGGGCTTE
T ss_pred HHHHHHHH-HHHhhC-CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCH-----HHHHHHHhcCccccccccCCCcE
Confidence 55554442 232222 25789999999999999888764 477888876 345555432 1 112
Q ss_pred EEecCCCCC-CCCCCCCcceEEecccccccc----ccHHHHHHHHHhccCCCcEEEEEcCC
Q 044932 357 VVSPLGNRR-LPFPSGVFDAIHCDGCSITWH----AHGGKLLLEMNRILRPSGYFILSTKH 412 (689)
Q Consensus 357 i~~~~dt~~-LPFpD~SFDlVhcs~cli~W~----~d~~~aL~EI~RVLRPGG~fVIsdp~ 412 (689)
.+...|+.. |--..++||+|+.-.. -++. -.-..++..+.|+|+|||.++.....
T Consensus 141 ~v~~~Dg~~~l~~~~~~yDvIi~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 141 KLVIDDGVNFVNQTSQTFDVIISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEEESCTTTTTSCSSCCEEEEEESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEEechHHHHHhhccccCCEEEEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 233344322 2335689999985311 0111 01237899999999999999997543
No 346
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.61 E-value=0.00027 Score=68.80 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=75.7
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccc------cchhhccccCCCCCCCccchhhccccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRG------LVGIYHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RG------Lig~yhdwce~f~typrTyDLlHa~~lfs 619 (689)
-..|+|+++|.|.++.+|..... .+|+-++. +..+...-.+. -|-+++.=.+.++.-+.+||+|.+.++|.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46899999999999999877631 12333332 12222222111 01122222334454456899999999887
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeCchh---------------hHHHHHHHHhhcceeEEE
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE---------------ILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD~~~---------------~l~~v~~i~~~lrW~~~~ 670 (689)
...+.. +..+|-++-|+|+|||.++|.+... ....++.++....++..-
T Consensus 158 ~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 158 HLTDQH--LAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp GSCHHH--HHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred hCCHHH--HHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 664421 1357899999999999999965311 367788888777776543
No 347
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.60 E-value=0.0026 Score=73.63 Aligned_cols=115 Identities=14% Similarity=0.063 Sum_probs=63.9
Q ss_pred HHHHHHHHhhcccccC-CCCCCeEEEECCccchhHH------Hhhc-----------CCeEEEEcCCcccHHHHHHHHHH
Q 044932 290 LHYLESIEEMVPDIEW-GKNIRVVLEIGSADLSFVA------SLLA-----------KEVLTLTVGLKDDLVDLAQVALE 351 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~-G~~~R~VLDVGCGtGsfaa------~La~-----------~~V~gmDIsp~D~seamlq~A~e 351 (689)
..|-+.|...+.++.. +....+|||||||+|-+.. .-++ ..|++++-+|. ....++....
T Consensus 390 ~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~--A~~~l~~~~~ 467 (745)
T 3ua3_A 390 DVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPN--AIVTLKYMNV 467 (745)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChH--HHHHHHHHHh
Confidence 4565555554332211 1124589999999997631 1122 26899988763 1122232223
Q ss_pred cCCCc--EEecCCCCCCCCC-----CCCcceEEeccc--cccccccHHHHHHHHHhccCCCcEEE
Q 044932 352 RGFPA--VVSPLGNRRLPFP-----SGVFDAIHCDGC--SITWHAHGGKLLLEMNRILRPSGYFI 407 (689)
Q Consensus 352 RGL~~--i~~~~dt~~LPFp-----D~SFDlVhcs~c--li~W~~d~~~aL~EI~RVLRPGG~fV 407 (689)
.|+.. .+...+++.+.+| ...+|+|++-.. ... .+--...|.-+.|.|||||.++
T Consensus 468 Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~-nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 468 RTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGD-NELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBG-GGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccc-hhccHHHHHHHHHhCCCCcEEE
Confidence 45433 3334455555552 378999997421 111 1222357777889999999765
No 348
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.00053 Score=69.13 Aligned_cols=94 Identities=11% Similarity=0.006 Sum_probs=60.1
Q ss_pred CeeEEeecCCcchhHHHHhcc---CCceEEEeccCCC-CCchhhhhcc-----ccch---hhccccCCCCCCC------c
Q 044932 546 KIRNVMDMKSIYGGFAAALAQ---QKIWVMNVVPVHA-PDTLPVIYDR-----GLVG---IYHDWCESFGTYP------R 607 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~---~~vWVMNvvp~~~-~~tL~vI~~R-----GLig---~yhdwce~f~typ------r 607 (689)
.-..|+|+++|.|.++..|.. ... +|+-++- +..+...-.+ |+.. ..+.=.+.++.-+ .
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFE---QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCS---EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 346799999999999999983 332 2343332 2223222222 2111 1221123333222 7
Q ss_pred cchhhccccccccccCCcCCccceeeeeccccccCcEEEE
Q 044932 608 SYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIV 647 (689)
Q Consensus 608 TyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~ii 647 (689)
+||+|++..+|... + ...+|-++-|+|||||.++|
T Consensus 113 ~fD~V~~~~~l~~~----~-~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF----D-FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS----C-HHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh----C-HHHHHHHHHHhcCCCcEEEE
Confidence 99999999988766 4 36789999999999999998
No 349
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.58 E-value=0.00049 Score=66.15 Aligned_cols=97 Identities=13% Similarity=0.151 Sum_probs=62.5
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcccc---chhhccccCCCCCCCccchhhcccccccccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
-.+|+|+++|.|.++..|...+.- +|+-++- +..+...-.+.- |-+.+.=.+.++.-+.+||+|.+.++|....
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 357999999999999999876431 2333332 122222222210 2222222233554468999999999887664
Q ss_pred CCcCCccceeeeeccccccCcEEEEeC
Q 044932 623 SRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 623 ~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+ ...+|-++-|+|+|||.++|..
T Consensus 122 ---~-~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 122 ---D-VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---C-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---h-HHHHHHHHHHhcCcCcEEEEEe
Confidence 3 3567889999999999999864
No 350
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=96.52 E-value=0.0015 Score=58.60 Aligned_cols=128 Identities=18% Similarity=0.191 Sum_probs=71.1
Q ss_pred eEEeecCCcchhHHHHhccC-----CceEEEeccCCCCCchhhhhccccchhhccccCCCC--------CCCccchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-----KIWVMNVVPVHAPDTLPVIYDRGLVGIYHDWCESFG--------TYPRSYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-----~vWVMNvvp~~~~~tL~vI~~RGLig~yhdwce~f~--------typrTyDLlHa 614 (689)
.+|+|+++|.|+|+.+|... .|..+-+-| . +.+ ..+--+..|+.+ ++ .-+.+||+|.+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~--~---~~~---~~~~~~~~d~~~-~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP--M---DPI---VGVDFLQGDFRD-ELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC--C---CCC---TTEEEEESCTTS-HHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc--c---ccc---CcEEEEEccccc-chhhhhhhccCCCCceeEEEE
Confidence 47999999999999988654 233333322 1 111 111111122222 11 22478999999
Q ss_pred ccccccccCC-cC------CccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhcceeE-EEee-----cCCCceEE
Q 044932 615 DHLFSRLKSR-CR------QPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWEI-RMTY-----AQDKEGIL 680 (689)
Q Consensus 615 ~~lfs~~~~~-c~------~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~~-~~~~-----~~~~E~iL 680 (689)
+..|...... .. +...+|-++-|+|+|||.+++..- ..-...+...+.. .|.. .+.. ....|.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (180)
T 1ej0_A 95 DMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREVYI 173 (180)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEEEE
T ss_pred CCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceEEE
Confidence 8877643321 00 003578889999999999999632 2233344444443 3654 2221 12357888
Q ss_pred EEEec
Q 044932 681 CAQKT 685 (689)
Q Consensus 681 ~~~K~ 685 (689)
+|++.
T Consensus 174 ~~~~~ 178 (180)
T 1ej0_A 174 VATGR 178 (180)
T ss_dssp EEEEE
T ss_pred EEccC
Confidence 88763
No 351
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=96.47 E-value=0.00074 Score=63.49 Aligned_cols=94 Identities=17% Similarity=0.195 Sum_probs=59.7
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----cc-chhhccccCCCCCCCccchhhcccccccccc
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GL-VGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GL-ig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
.|+|+++|.|.++.+|..... +|+-++.. ..+...-.+ |+ +-+++.=.+.++.-+.+||+|.+. |..+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~- 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHL- 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCC-
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcC-
Confidence 799999999999999988753 45555542 333332222 32 222222223334335799999874 3332
Q ss_pred CCcCCccceeeeeccccccCcEEEEeC
Q 044932 623 SRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 623 ~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..-. ...+|-+|-|+|+|||.+++.+
T Consensus 106 ~~~~-~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 106 PSSL-RQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CHHH-HHHHHHHHHTTCCSSEEEEEEE
T ss_pred CHHH-HHHHHHHHHHhcCCCcEEEEEE
Confidence 2223 3568899999999999999984
No 352
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=96.45 E-value=0.00068 Score=63.59 Aligned_cols=119 Identities=14% Similarity=0.128 Sum_probs=69.4
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----ccch-hhccccCCCCCCCccchhhccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GLVG-IYHDWCESFGTYPRSYDLLHADHLFSRL 621 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GLig-~yhdwce~f~typrTyDLlHa~~lfs~~ 621 (689)
..|+|+++|.|.++..|.....- +|+-++-. ..+...-.+ .-|- +..|. ..++.-+.+||+|-+.++|...
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV-RKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT-TSCCSCSSCEEEEEEESHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch-hcCCCCCCcccEEEECcchhhh
Confidence 46999999999999998765321 23333321 222211111 1111 12232 2234345799999998888654
Q ss_pred cC------------CcCCccceeeeeccccccCcEEEEeCchhhHHHHHHHH--hhcceeEEEe
Q 044932 622 KS------------RCRQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGIL--RSLHWEIRMT 671 (689)
Q Consensus 622 ~~------------~c~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~--~~lrW~~~~~ 671 (689)
.. ... ...+|-++-|+|+|||.+++.+-..- ...+.++ .+..|.....
T Consensus 121 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~~~ 182 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHT-VDQVLSEVSRVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLRHA 182 (215)
T ss_dssp TTTCSCTTSCCHHHHHH-HHHHHHHHHHHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEEEE
T ss_pred ccccccccccccchhHH-HHHHHHHHHHhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEEEE
Confidence 31 112 25689999999999999999864331 1122333 4456876544
No 353
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.44 E-value=0.0015 Score=63.84 Aligned_cols=129 Identities=12% Similarity=0.215 Sum_probs=75.2
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhh----hhcccc---chhh-ccccCCCC-CCCccchhhcccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGL---VGIY-HDWCESFG-TYPRSYDLLHADH 616 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGL---ig~y-hdwce~f~-typrTyDLlHa~~ 616 (689)
-++|+|+++|.|.++.+|....- ...|+-++.. ..+.. +-..|+ |-++ .|..+.++ ..+.+||+|..+.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 45899999999999999987210 1234444432 22222 222233 2222 23344444 4568999998664
Q ss_pred ccccccCCcCCccceeeeeccccccCcEEEEeCc-----------------hhhHHHHHHHH----hhcceeEEEeecCC
Q 044932 617 LFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK-----------------VEILDPLEGIL----RSLHWEIRMTYAQD 675 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~-----------------~~~l~~v~~i~----~~lrW~~~~~~~~~ 675 (689)
-... ...++-++-|+|||||++++.+- ..+...++.+. ..-+|.+.+. .-
T Consensus 151 ~~~~-------~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~ 221 (232)
T 3ntv_A 151 AKAQ-------SKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFL--NI 221 (232)
T ss_dssp TSSS-------HHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEE--CS
T ss_pred cHHH-------HHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEE--Ec
Confidence 3222 24567778899999999999432 11223344333 3446776655 23
Q ss_pred CceEEEEEec
Q 044932 676 KEGILCAQKT 685 (689)
Q Consensus 676 ~E~iL~~~K~ 685 (689)
.+++++++|+
T Consensus 222 ~dG~~i~~k~ 231 (232)
T 3ntv_A 222 DDGLAISIKG 231 (232)
T ss_dssp TTCEEEEEEC
T ss_pred CCceEEEEEC
Confidence 4689999885
No 354
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=96.44 E-value=0.0012 Score=68.56 Aligned_cols=133 Identities=22% Similarity=0.267 Sum_probs=81.0
Q ss_pred CCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchhhh----hccccc----hhhccccCCCCCCCccchhhcc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLPVI----YDRGLV----GIYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~vI----~~RGLi----g~yhdwce~f~typrTyDLlHa 614 (689)
..-..|+|+++|.|.++.+|... .+-| +-++-+..+... -..|+- =+-+|..+ .+|..||+|.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRG---TLVELAGPAERARRRFADAGLADRVTVAEGDFFK---PLPVTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEE---EEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CCSCCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEE---EEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC---cCCCCCCEEEE
Confidence 45678999999999999998753 2222 222222222221 123332 12234444 35666999999
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeCc--h--h-----------------------hHHHHHHHHhhccee
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK--V--E-----------------------ILDPLEGILRSLHWE 667 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~--~--~-----------------------~l~~v~~i~~~lrW~ 667 (689)
.++|..+.+.-. ..+|-++-|+|+|||.++|-|. . + ....++.++..-.++
T Consensus 255 ~~vl~~~~~~~~--~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 332 (374)
T 1qzz_A 255 SFVLLNWSDEDA--LTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLA 332 (374)
T ss_dssp ESCGGGSCHHHH--HHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEE
T ss_pred eccccCCCHHHH--HHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 999887654311 2578999999999999988665 2 1 234566666666666
Q ss_pred EE-EeecCCCc-----eEEEEEec
Q 044932 668 IR-MTYAQDKE-----GILCAQKT 685 (689)
Q Consensus 668 ~~-~~~~~~~E-----~iL~~~K~ 685 (689)
.. +....... .++.|+|.
T Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 333 LASERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEEEEECCSSCSSCEEEEEEEEC
T ss_pred eEEEEECCCCcccCCcEEEEEEEC
Confidence 43 33323334 78888774
No 355
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=96.42 E-value=0.00048 Score=72.81 Aligned_cols=96 Identities=21% Similarity=0.285 Sum_probs=62.2
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhcc---------c-c----chhhccccCCC------CC
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYDR---------G-L----VGIYHDWCESF------GT 604 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~R---------G-L----ig~yhdwce~f------~t 604 (689)
..|||+++|.|.++..|... +-+ .|+-++- +..|...-.+ | + |-+.+.-.+.+ +.
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG--KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC--EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 47999999999998888653 221 2333333 2333333332 3 1 22222222222 44
Q ss_pred CCccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 605 YPRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 605 yprTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+.+||+|++..+|....+. ..+|-++-|+|||||+++|.+
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~----~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNK----LALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCH----HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCCH----HHHHHHHHHHcCCCCEEEEEE
Confidence 56799999999999876542 567999999999999999975
No 356
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.40 E-value=0.00047 Score=66.27 Aligned_cols=111 Identities=19% Similarity=0.210 Sum_probs=72.8
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCchhhhhccccchhhccccCCCCCCCccchhhccccccccccCCcCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTLPVIYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRCRQ 627 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL~vI~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c~~ 627 (689)
..|+|+++|.|.++.+|... ..+-. .+..+...-.+++- +++.-.+.++.-+.+||+|.+.++|....+
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~--~~vD~----s~~~~~~a~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---- 117 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK--IGVEP----SERMAEIARKRGVF-VLKGTAENLPLKDESFDFALMVTTICFVDD---- 117 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC--EEEES----CHHHHHHHHHTTCE-EEECBTTBCCSCTTCEEEEEEESCGGGSSC----
T ss_pred CcEEEeCCCCCHHHHHHHHH--hccCC----CHHHHHHHHhcCCE-EEEcccccCCCCCCCeeEEEEcchHhhccC----
Confidence 46999999999999999876 11111 12333334444322 222222345544579999999998876532
Q ss_pred ccceeeeeccccccCcEEEEeCch------------------------hhHHHHHHHHhhcceeEE
Q 044932 628 PVSIVVEMDRILRPGGWAIVRDKV------------------------EILDPLEGILRSLHWEIR 669 (689)
Q Consensus 628 ~~~illEmDRILRP~G~~iirD~~------------------------~~l~~v~~i~~~lrW~~~ 669 (689)
...+|-++-|+|+|||.++|.+-. -....+..++....++..
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEE
Confidence 256789999999999999997321 134677777777777653
No 357
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.38 E-value=0.0019 Score=62.50 Aligned_cols=107 Identities=11% Similarity=0.102 Sum_probs=68.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc--ccchhhccccCCCCCC-CccchhhccccccccccC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR--GLVGIYHDWCESFGTY-PRSYDLLHADHLFSRLKS 623 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R--GLig~yhdwce~f~ty-prTyDLlHa~~lfs~~~~ 623 (689)
..|+|+++|.|.++..|..... .|+-++-. ..|...-.+ .+-=+..|+.+.++.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 4699999999999999988743 35544432 334443333 1222234565666644 6899999876
Q ss_pred CcCCccceeeeeccccccCcEEEEeCchhhHHHHHHHHhhccee
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGILRSLHWE 667 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~~~lrW~ 667 (689)
-. ...+|-++-|+|+|||.++.-....-+..+...+....+.
T Consensus 119 -~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 119 -RG-PTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWD 160 (226)
T ss_dssp -SC-CSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCE
T ss_pred -CC-HHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCe
Confidence 13 3567889999999999999432222344555555554443
No 358
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.37 E-value=0.00043 Score=66.53 Aligned_cols=94 Identities=17% Similarity=0.254 Sum_probs=60.9
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----cc-chhh-ccccCCCCCCCccchhhcccc-ccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GL-VGIY-HDWCESFGTYPRSYDLLHADH-LFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GL-ig~y-hdwce~f~typrTyDLlHa~~-lfs 619 (689)
..|+|+++|.|.++..|... .+|+-++-. ..|...-.+ |. +-+. .|.. .++ +|.+||+|-+.+ +|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELE-LPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCC-CSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcC-CCCCcCEEEEeCCchh
Confidence 57999999999999999877 245544432 333322222 11 1111 1222 232 468999999875 776
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEe
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
...+.-. +..+|-++-|+|+|||.+++.
T Consensus 109 ~~~~~~~-~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQTEAD-VKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCCSHHH-HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHH-HHHHHHHHHHhcCCCeEEEEE
Confidence 6544444 356788999999999999983
No 359
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=96.36 E-value=0.0025 Score=59.75 Aligned_cols=78 Identities=19% Similarity=0.289 Sum_probs=44.1
Q ss_pred ccchhhccccccccccCC-------cCCccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhcceeEEEee-----c
Q 044932 607 RSYDLLHADHLFSRLKSR-------CRQPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWEIRMTY-----A 673 (689)
Q Consensus 607 rTyDLlHa~~lfs~~~~~-------c~~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~~~~~~-----~ 673 (689)
.+||+|-+++.+...... -.+...+|-++-|+|+|||.+++..- .+-+..+...+...-..+.+.. .
T Consensus 105 ~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~~v~~~~~~~~r~ 184 (201)
T 2plw_A 105 KKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQLVHTTKPKASRN 184 (201)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEEEEEECCCC----
T ss_pred CcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHheEEEECCcccCC
Confidence 689999988765431100 00012367789999999999998521 1223334444444322333331 1
Q ss_pred CCCceEEEEEe
Q 044932 674 QDKEGILCAQK 684 (689)
Q Consensus 674 ~~~E~iL~~~K 684 (689)
...|.+|||++
T Consensus 185 ~s~e~y~v~~~ 195 (201)
T 2plw_A 185 ESREIYLVCKN 195 (201)
T ss_dssp -CCEEEEEEEE
T ss_pred cCceEEEEEec
Confidence 34688999976
No 360
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.36 E-value=0.0019 Score=62.07 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=73.5
Q ss_pred eEEeecCCc-chhHHHHhccCCceEEEeccCCCC-Cchhh----hhcccc-chhhccccCCCCCC-Cccchhhccccccc
Q 044932 548 RNVMDMKSI-YGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGL-VGIYHDWCESFGTY-PRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~-~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGL-ig~yhdwce~f~ty-prTyDLlHa~~lfs 619 (689)
..|+|+++| .|.++.+|.... --+|+-++-. ..+.. +-..|+ |-+++.=...+..+ +.+||+|-++-.|.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 579999999 999998887652 1134444432 22222 122243 22222111123333 38999999875553
Q ss_pred cccC----------------CcCCccceeeeeccccccCcEEEE--eCchhhHHHHHHHHhhcceeEEEe
Q 044932 620 RLKS----------------RCRQPVSIVVEMDRILRPGGWAIV--RDKVEILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 620 ~~~~----------------~c~~~~~illEmDRILRP~G~~ii--rD~~~~l~~v~~i~~~lrW~~~~~ 671 (689)
.... ... +..+|-++-|+|+|||.+++ -.....+..+..++....|++...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEF-SVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp ---------------CCSSSCHH-HHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCccccccChhhhhccCccchHH-HHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEE
Confidence 3211 111 24578889999999999888 345567888888888888987665
No 361
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.35 E-value=0.00074 Score=66.70 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=62.9
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhccccchhhccccCCCCCCCccchhhccccccccccCCc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSRC 625 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~c 625 (689)
-..|||+++|.|.++..|..... +|+-++. +..+...-.+..--+.+.=.+.++.-+.+||+|-+.+.+-.+...
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~- 130 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN- 130 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC-
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc-
Confidence 35799999999999999987753 3444443 233443333332001111123345446799999988755544332
Q ss_pred CCccceeeeeccccccCcEEEEeC
Q 044932 626 RQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 626 ~~~~~illEmDRILRP~G~~iirD 649 (689)
...+|-+|-|+|+|||.++|..
T Consensus 131 --~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 131 --KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHcCCCeEEEEEe
Confidence 2568999999999999999874
No 362
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.33 E-value=0.0038 Score=60.30 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=76.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----cccch---h-hccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGLVG---I-YHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGLig---~-yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++..|..... +|+-++- +..+...-. .|+.. + -.|..+ ++ .+.+||+|.+.++|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 4899999999999999987653 3444443 223322222 22211 1 223333 22 45689999999988
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeCch-----------hhHHHHHHHHhhcceeEEEe
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-----------EILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD~~-----------~~l~~v~~i~~~lrW~~~~~ 671 (689)
.... .-. ...+|-++-|+|+|||.+++-+-. -....++.++....|+....
T Consensus 143 ~~~~-~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 143 CAIE-PEM-RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TTSC-GGG-HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred hcCC-HHH-HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 8664 223 256789999999999999985321 13578888888888886443
No 363
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.33 E-value=0.0014 Score=65.44 Aligned_cols=112 Identities=17% Similarity=0.180 Sum_probs=71.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----ccc-chhhc-cccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGL-VGIYH-DWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGL-ig~yh-dwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|+|+++|.|.++.++..... +|+-++- +..+...-+ .|+ +-+++ |+.+.|+ +.+||+|.++.++..
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAEL 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHHH
Confidence 4799999999999988876543 4444443 233322222 232 22222 2322221 468999998766542
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhcceeEEEe
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~~~~~ 671 (689)
+..++-++-|+|+|||.+++.+- ..-...+..++....++..-.
T Consensus 197 -------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 197 -------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred -------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 24678889999999999999753 335677777777777776443
No 364
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.33 E-value=0.0013 Score=68.95 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=63.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCch----hhhhcccc---chhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTL----PVIYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL----~vI~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|||+++|.|.++..|...+.. .|+-++...-+ ..+...|+ |-+.+.-.+.++.-+.+||+|.+..++..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~--~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGAR--KVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CEEEEEeccchHHHHHHHHCCCC--EEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 46999999999999998876531 23333332222 22333454 33444334444323489999999776554
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEe
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
+...-. +..+|-+++|+|+|||.+|+.
T Consensus 146 l~~~~~-~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 146 LFYESM-LNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTCC-HHHHHHHHHHHEEEEEEEESC
T ss_pred ccCchh-HHHHHHHHHHhCCCCCEEccc
Confidence 444344 467888999999999998754
No 365
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.32 E-value=0.0018 Score=64.34 Aligned_cols=130 Identities=8% Similarity=0.126 Sum_probs=72.4
Q ss_pred eeEEeecCCcchhHHHHhccC-----CceEEEeccCCCCCchhhhhccccc---hhhc-cccCCCCCC-----Cccchhh
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-----KIWVMNVVPVHAPDTLPVIYDRGLV---GIYH-DWCESFGTY-----PRSYDLL 612 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-----~vWVMNvvp~~~~~tL~vI~~RGLi---g~yh-dwce~f~ty-----prTyDLl 612 (689)
-++|+|+++|.|.++.+|... .|.-+-+-|......-..+-..|+- -+.+ |..+.++.+ +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 468999999999999888752 2332222222111111223333442 1222 222333333 5789999
Q ss_pred ccccccccccCCcCCccceeeeeccccccCcEEEEeCch------------hhHHHHHHHHh----hcceeEEEeecCCC
Q 044932 613 HADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV------------EILDPLEGILR----SLHWEIRMTYAQDK 676 (689)
Q Consensus 613 Ha~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~------------~~l~~v~~i~~----~lrW~~~~~~~~~~ 676 (689)
..++....+ ..+|-++=|+|||||++++.|-. .....++.+.. .=++++.+. .-.
T Consensus 141 ~~d~~~~~~-------~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~~ 211 (242)
T 3r3h_A 141 FIDADKTNY-------LNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL--AIA 211 (242)
T ss_dssp EEESCGGGH-------HHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE--SSS
T ss_pred EEcCChHHh-------HHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE--Ecc
Confidence 877642221 23466777999999999997533 11223344333 335555554 235
Q ss_pred ceEEEEEec
Q 044932 677 EGILCAQKT 685 (689)
Q Consensus 677 E~iL~~~K~ 685 (689)
+++++++|+
T Consensus 212 dG~~~~~k~ 220 (242)
T 3r3h_A 212 DGMFLVQPI 220 (242)
T ss_dssp SCEEEEEEC
T ss_pred CceEEEEEc
Confidence 789999875
No 366
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.32 E-value=0.00051 Score=66.81 Aligned_cols=94 Identities=18% Similarity=0.167 Sum_probs=60.7
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhccc-cchhhccccCCCCCCCccchhhccccccccccC
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYDRG-LVGIYHDWCESFGTYPRSYDLLHADHLFSRLKS 623 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~RG-Lig~yhdwce~f~typrTyDLlHa~~lfs~~~~ 623 (689)
.+|+|+++|.|.++.+|... .. +|+-++- +..+...-.+. -+-+.+.=.+.++ .+.+||+|++..+|....+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 110 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVPD 110 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTT
T ss_pred CEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCCC
Confidence 57999999999999988754 22 1222222 22333332221 0111222233445 5789999999998876642
Q ss_pred CcCCccceeeeeccccccCcEEEEeC
Q 044932 624 RCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 624 ~c~~~~~illEmDRILRP~G~~iirD 649 (689)
...+|-+|-|+|+|||+++|..
T Consensus 111 ----~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 111 ----HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ----HHHHHHHHGGGEEEEEEEEEEE
T ss_pred ----HHHHHHHHHHhcCCCeEEEEEe
Confidence 3567899999999999999974
No 367
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.31 E-value=0.0019 Score=64.75 Aligned_cols=133 Identities=13% Similarity=0.231 Sum_probs=81.7
Q ss_pred eEEeecCCcchhHHHHhcc-CCceEEEeccCCCC-Cchhhhhcc----cc--ch-hhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQ-QKIWVMNVVPVHAP-DTLPVIYDR----GL--VG-IYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~-~~vWVMNvvp~~~~-~tL~vI~~R----GL--ig-~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++.+|.. .+-+ +|+-++-. ..|.+.-.+ |+ |- +..|+.+.++ +.+||+|-++--|
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC--EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS--EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 4699999999999998873 2322 34444432 233322221 32 22 2235555443 5789999987433
Q ss_pred ccc------------cCCc---------CCccceeeeeccccccCcEEEEeCchhhHHHHHHHHhhcceeE-E-EeecCC
Q 044932 619 SRL------------KSRC---------RQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGILRSLHWEI-R-MTYAQD 675 (689)
Q Consensus 619 s~~------------~~~c---------~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~~~lrW~~-~-~~~~~~ 675 (689)
... .... ..+..++-++-|+|+|||++++-....-...++.++....|.. . ..|..+
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g 266 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGD 266 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTTS
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 221 1110 0124567788999999999999876666677778777666642 2 335566
Q ss_pred CceEEEEEe
Q 044932 676 KEGILCAQK 684 (689)
Q Consensus 676 ~E~iL~~~K 684 (689)
.+++++++|
T Consensus 267 ~~r~~~~~~ 275 (276)
T 2b3t_A 267 NERVTLGRY 275 (276)
T ss_dssp SEEEEEEEC
T ss_pred CCcEEEEEE
Confidence 789998875
No 368
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=96.29 E-value=0.0019 Score=67.89 Aligned_cols=135 Identities=17% Similarity=0.268 Sum_probs=84.9
Q ss_pred CCCCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchh----hhhccccch----hhccccCCCCCCCccchhh
Q 044932 543 DWSKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLP----VIYDRGLVG----IYHDWCESFGTYPRSYDLL 612 (689)
Q Consensus 543 ~~~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~----vI~~RGLig----~yhdwce~f~typrTyDLl 612 (689)
++.....|+|+++|.|.++.+|.+. .+-+ +-++-|..+. .+.+.|+-+ +-+|..+ .+|..||+|
T Consensus 199 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~---~~p~~~D~v 272 (369)
T 3gwz_A 199 DFSGAATAVDIGGGRGSLMAAVLDAFPGLRG---TLLERPPVAEEARELLTGRGLADRCEILPGDFFE---TIPDGADVY 272 (369)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTT---CCCSSCSEE
T ss_pred CCccCcEEEEeCCCccHHHHHHHHHCCCCeE---EEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCC---CCCCCceEE
Confidence 3456789999999999999999753 2222 2222222222 122234322 2234443 455589999
Q ss_pred ccccccccccCCcCCccceeeeeccccccCcEEEEeCch------------h------------hHHHHHHHHhhcceeE
Q 044932 613 HADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV------------E------------ILDPLEGILRSLHWEI 668 (689)
Q Consensus 613 Ha~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~------------~------------~l~~v~~i~~~lrW~~ 668 (689)
.+.++|..+.+.-. ..+|-++=|+|+|||.++|-|.. + ....++.++..-.|..
T Consensus 273 ~~~~vlh~~~d~~~--~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 273 LIKHVLHDWDDDDV--VRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEESCGGGSCHHHH--HHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EhhhhhccCCHHHH--HHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 99999977754321 24788999999999999996521 1 1455677777777775
Q ss_pred EEe-e-cCCCceEEEEEec
Q 044932 669 RMT-Y-AQDKEGILCAQKT 685 (689)
Q Consensus 669 ~~~-~-~~~~E~iL~~~K~ 685 (689)
.-. . ......|+.|+|.
T Consensus 351 ~~~~~~~~~~~svie~~~a 369 (369)
T 3gwz_A 351 ERSLPCGAGPVRIVEIRRA 369 (369)
T ss_dssp EEEEECSSSSEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEeC
Confidence 433 3 3445678888763
No 369
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.28 E-value=0.0021 Score=65.14 Aligned_cols=112 Identities=13% Similarity=0.136 Sum_probs=71.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhh----hccccch---hhccccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVI----YDRGLVG---IYHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI----~~RGLig---~yhdwce~f~typrTyDLlHa~~lfs 619 (689)
..|+|+.+|.|+|+..|....-- .|+-++.. ..+... -..|+-. +++.=+..+.. +.+||+|.++..++
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~~ 203 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVVR 203 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCSS
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCchh
Confidence 46999999999999888653211 24444432 222221 1224432 22222233333 67899997765432
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeCch-------hhHHHHHHHHhhcceeEEE
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-------EILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD~~-------~~l~~v~~i~~~lrW~~~~ 670 (689)
. ..++-++-|+|+|||++++-+.. +.+..+...+....|++..
T Consensus 204 ~--------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 204 T--------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp G--------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred H--------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 2 34677888999999999996543 5778899999999998876
No 370
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=96.27 E-value=0.00074 Score=70.79 Aligned_cols=98 Identities=12% Similarity=0.212 Sum_probs=62.9
Q ss_pred CeeEEeecCCcchhHHHHhcc--CCceEEEeccCCCCCchhhh----hccccch----hhccccCCCCCCCccchhhccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQ--QKIWVMNVVPVHAPDTLPVI----YDRGLVG----IYHDWCESFGTYPRSYDLLHAD 615 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~--~~vWVMNvvp~~~~~tL~vI----~~RGLig----~yhdwce~f~typrTyDLlHa~ 615 (689)
..+.|+|+++|.|.++.+|.. ..+ .|+-++-|..+... -+.|+-+ +-+|..+.-..+|.+||+|.+.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 467899999999999999975 232 12222223333222 2234322 1223222100367899999999
Q ss_pred cccccccCC-cCCccceeeeeccccccCcEEEEeC
Q 044932 616 HLFSRLKSR-CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 616 ~lfs~~~~~-c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+|..|.+. |. .||-++=|+|+|||.++|-|
T Consensus 256 ~vlh~~~~~~~~---~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSEEEVI---SILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCHHHHH---HHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCHHHHH---HHHHHHHHhcCCCcEEEEEe
Confidence 999877643 33 47889999999999998865
No 371
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=96.26 E-value=0.0075 Score=56.25 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=79.0
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCCC-CchhhhhccccchhhccccCCCCCCCccchhhccccccccccCC---
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLKSR--- 624 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~~~--- 624 (689)
.|+|+++|.|.++.+|.... +|+-++-. ..+.. ...+--+..|..+.+ -+.+||+|-++..|-.....
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~--~~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSI--NQESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTB--CGGGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhc--ccCCCCEEEECCCCccCCccccc
Confidence 79999999999999998875 56665543 22222 122222223333332 23899999998777643322
Q ss_pred ---cCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEEEe--ecCCCceEEEEE
Q 044932 625 ---CRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIRMT--YAQDKEGILCAQ 683 (689)
Q Consensus 625 ---c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~~~--~~~~~E~iL~~~ 683 (689)
... ..++-++=|.| |||.+++-. ...-...+..++....|..... ....-|.+++..
T Consensus 98 ~~~~~~-~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 98 GGGYLG-REVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp BCCGGG-CHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred cCCcch-HHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 111 23455555666 999999865 4456788888888888887544 334556766654
No 372
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.22 E-value=0.00063 Score=65.18 Aligned_cols=126 Identities=16% Similarity=0.176 Sum_probs=72.0
Q ss_pred eEEeecCCcchhHHHHhccC---CceEEEeccCCCC-Cchhh----hhccccch---hh-ccccCCCCCCC-----ccch
Q 044932 548 RNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHAP-DTLPV----IYDRGLVG---IY-HDWCESFGTYP-----RSYD 610 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~~-~tL~v----I~~RGLig---~y-hdwce~f~typ-----rTyD 610 (689)
.+|+|+++|.|.++..|... .. .|+-++.. ..+.. +-..|+-. ++ .|..+.++.++ .+||
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 47999999999999999764 22 23333321 22222 11223321 11 13333333333 7899
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeCchh------------hHHHHHHHH----hhcceeEEEeecC
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE------------ILDPLEGIL----RSLHWEIRMTYAQ 674 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~------------~l~~v~~i~----~~lrW~~~~~~~~ 674 (689)
+|..++-.. . ...++-++=|+|+|||++++.|-.- ....++.+. ..-+|.+.+. .
T Consensus 143 ~v~~~~~~~------~-~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p 213 (225)
T 3tr6_A 143 LIYIDADKA------N-TDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILI--P 213 (225)
T ss_dssp EEEECSCGG------G-HHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE--C
T ss_pred EEEECCCHH------H-HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEE--E
Confidence 998665322 1 1345667779999999999986431 122333333 3345766655 2
Q ss_pred CCceEEEEEec
Q 044932 675 DKEGILCAQKT 685 (689)
Q Consensus 675 ~~E~iL~~~K~ 685 (689)
...++++++|+
T Consensus 214 ~~dG~~~~~k~ 224 (225)
T 3tr6_A 214 IGDGLTLARKK 224 (225)
T ss_dssp STTCEEEEEEC
T ss_pred cCCccEEEEEC
Confidence 34689999885
No 373
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.21 E-value=0.00061 Score=64.11 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=59.5
Q ss_pred eEEeecCCcchhH-HHHhccCCceEEEeccCCCC-Cchhhhhc----ccc-chhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGF-AAALAQQKIWVMNVVPVHAP-DTLPVIYD----RGL-VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgF-AAal~~~~vWVMNvvp~~~~-~tL~vI~~----RGL-ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|+|+++|.|.+ ++.+..... +|+-++.. ..+...-. .|. +-+.+.=.+.++.-+.+||+|.+.++|..
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 4799999999998 444444443 34444432 22222221 121 12222222334544689999999888766
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.. .-. ...+|-++-|+|+|||.+++.+
T Consensus 102 ~~-~~~-~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 102 MR-KND-VKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SC-HHH-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-HHH-HHHHHHHHHHHcCCCcEEEEEE
Confidence 52 223 3567899999999999999975
No 374
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.21 E-value=0.00099 Score=66.44 Aligned_cols=115 Identities=17% Similarity=0.243 Sum_probs=72.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhh----hcccc-chhh-ccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVI----YDRGL-VGIY-HDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI----~~RGL-ig~y-hdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|+|+++|.|.++..|..... +|+-++-. ..+... -..|+ |-++ .|.. .++. +.+||+|.+..+|..
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDIN-AANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGG-GCCC-CSCEEEEEECSSGGG
T ss_pred CcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccc-cccc-cCCccEEEEccchhh
Confidence 4699999999999999987753 45555432 223222 22343 1111 2322 2333 889999999999876
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeCc--------------hhhHHHHHHHHhhcceeEEEe
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRDK--------------VEILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD~--------------~~~l~~v~~i~~~lrW~~~~~ 671 (689)
... -. +..+|-+|-|+|+|||.++|-.. .-....++.+... |++...
T Consensus 197 ~~~-~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 197 LNR-ER-VPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp SCG-GG-HHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred CCH-HH-HHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 532 23 24688899999999999776421 1124466666666 776443
No 375
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.20 E-value=0.0006 Score=67.52 Aligned_cols=99 Identities=16% Similarity=0.105 Sum_probs=61.6
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhc----ccc---chhhccccCCCCC-CCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYD----RGL---VGIYHDWCESFGT-YPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~----RGL---ig~yhdwce~f~t-yprTyDLlHa~~lf 618 (689)
..|||+++|.|.++..|...+.. +|+-++-. ..+...-. .|+ |-+.+.=++.++. -+.+||+|.+.++|
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 47999999999999888765421 23333332 22222222 232 2222322333333 46799999998887
Q ss_pred ccc-cCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRL-KSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~-~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
... .+.-. ...+|-++-|+|+|||.++|..
T Consensus 144 ~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 144 HYAFSTSES-LDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGGSSHHH-HHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhcCCHHH-HHHHHHHHHHhcCCCCEEEEEE
Confidence 531 22233 3568899999999999999875
No 376
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.18 E-value=0.0017 Score=60.30 Aligned_cols=133 Identities=14% Similarity=0.055 Sum_probs=73.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhh----hcccc--chhhccccCCCCC-CCccchhhccc-ccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVI----YDRGL--VGIYHDWCESFGT-YPRSYDLLHAD-HLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI----~~RGL--ig~yhdwce~f~t-yprTyDLlHa~-~lf 618 (689)
..|+|+++|.|.++..|..... +|+-++-. .-|... -..|+ |-+.++-.+.+.. .+.+||+|.++ +.+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 3699999999999999987632 34444432 233222 22344 3344444444332 36789999665 333
Q ss_pred cccc-----CCcCCccceeeeeccccccCcEEEEeCc------hhhHHHHHHHHhhcc---eeEEEee---c-CCCceEE
Q 044932 619 SRLK-----SRCRQPVSIVVEMDRILRPGGWAIVRDK------VEILDPLEGILRSLH---WEIRMTY---A-QDKEGIL 680 (689)
Q Consensus 619 s~~~-----~~c~~~~~illEmDRILRP~G~~iirD~------~~~l~~v~~i~~~lr---W~~~~~~---~-~~~E~iL 680 (689)
.... ..-. ...+|-++-|+|+|||.+++-.- .+-...+..++..+. |.+.... . .....++
T Consensus 101 ~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (185)
T 3mti_A 101 PSADKSVITKPHT-TLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLV 179 (185)
T ss_dssp ---------CHHH-HHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEE
T ss_pred CCcchhcccChhh-HHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEE
Confidence 2100 0011 12456788899999999988531 223445555555554 7764431 2 2334555
Q ss_pred EEEe
Q 044932 681 CAQK 684 (689)
Q Consensus 681 ~~~K 684 (689)
+..|
T Consensus 180 ~i~~ 183 (185)
T 3mti_A 180 MLEK 183 (185)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5555
No 377
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.17 E-value=0.0016 Score=66.50 Aligned_cols=93 Identities=11% Similarity=-0.082 Sum_probs=51.5
Q ss_pred CeEEEECCccchhHHHhhc--CCeEEEEcCCcccH--HHHHHHHHHc----C-C--CcEEecCCCCC-CCCCCCCcceEE
Q 044932 310 RVVLEIGSADLSFVASLLA--KEVLTLTVGLKDDL--VDLAQVALER----G-F--PAVVSPLGNRR-LPFPSGVFDAIH 377 (689)
Q Consensus 310 R~VLDVGCGtGsfaa~La~--~~V~gmDIsp~D~s--eamlq~A~eR----G-L--~~i~~~~dt~~-LPFpD~SFDlVh 377 (689)
.+|||+|||+|..+..|+. ..|+++|+++.... ...++.+..+ + + ...+...|... |+....+||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 6899999999998887774 46999999884211 1122222211 1 1 12233344333 442224799999
Q ss_pred eccccccccccHHHHHHHHHhccCCCc
Q 044932 378 CDGCSITWHAHGGKLLLEMNRILRPSG 404 (689)
Q Consensus 378 cs~cli~W~~d~~~aL~EI~RVLRPGG 404 (689)
+.-.. ++ .....++.+..|+||+.+
T Consensus 170 lDP~y-~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDPMF-PH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECCCC-CC-CCC-----HHHHHHHHHS
T ss_pred EcCCC-CC-cccchHHHHHHHHHHHhh
Confidence 75322 22 222356778888888866
No 378
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.16 E-value=0.00032 Score=67.55 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=60.1
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhcc----ccchhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYDR----GLVGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~R----GLig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|+|+++|.|.++.+|... .. +|+-++- +..+...-.+ |-|-+.+.=.+.++ ++.+||+|.+..+|..
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYD-FEEKYDMVVSALSIHH 121 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCC-CCSCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccC-CCCCceEEEEeCcccc
Confidence 67999999999999998764 22 2333332 2222222222 11112221122222 3389999999998887
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..+.-. ..+|-++-|+|+|||.++|.|
T Consensus 122 ~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 122 LEDEDK--KELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp SCHHHH--HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHH--HHHHHHHHHhcCCCcEEEEEE
Confidence 642211 247889999999999999976
No 379
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.14 E-value=0.0039 Score=61.81 Aligned_cols=120 Identities=17% Similarity=0.171 Sum_probs=77.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhh----hhcccc---chhhc-cccCCCCCC-Cccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGL---VGIYH-DWCESFGTY-PRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGL---ig~yh-dwce~f~ty-prTyDLlHa~~l 617 (689)
..|+|+++|.|.++..|....-. +|+-++-. ..+.. +...|+ |-+++ |..+....+ +.+||+|-++--
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 47999999999999998876433 45555542 22221 122243 22222 333332223 589999999755
Q ss_pred cccc-----------------cCCcCCccceeeeeccccccCcEEEEeCchhhHHHHHHHHhhcceeEEE
Q 044932 618 FSRL-----------------KSRCRQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 618 fs~~-----------------~~~c~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~~~lrW~~~~ 670 (689)
|... ...+. +..++-++-|+|+|||.+++--..+-+..+..++....|....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCT-LEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp C-----------------------HH-HHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCC-HHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 4322 11244 3678889999999999999976677888888888888887643
No 380
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.13 E-value=0.0023 Score=63.40 Aligned_cols=129 Identities=13% Similarity=0.122 Sum_probs=75.3
Q ss_pred eeEEeecCCcchhHHHHhccC---CceEEEeccCCC-CCchhhhhc----cccch----hhccccCCCCCCCc--cchhh
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHA-PDTLPVIYD----RGLVG----IYHDWCESFGTYPR--SYDLL 612 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~-~~tL~vI~~----RGLig----~yhdwce~f~typr--TyDLl 612 (689)
-++|+|+++|.|+++.+|... .. .|+-++- +..+...-. .|+-. +..|..+.++..+. +||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 468999999999999998764 21 2333332 233332222 24321 12344443444444 89999
Q ss_pred ccccccccccCCcCCccceeeeeccccccCcEEEEeCchh------------hHHHHHHHH----hhcceeEEEeec---
Q 044932 613 HADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE------------ILDPLEGIL----RSLHWEIRMTYA--- 673 (689)
Q Consensus 613 Ha~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~------------~l~~v~~i~----~~lrW~~~~~~~--- 673 (689)
.+++-... ...+|-++=|+|||||++++.|-.- ....++.+. ..-+|.+.+...
T Consensus 141 ~~d~~~~~-------~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~ 213 (248)
T 3tfw_A 141 FIDADKPN-------NPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGT 213 (248)
T ss_dssp EECSCGGG-------HHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECST
T ss_pred EECCchHH-------HHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCC
Confidence 87663221 1345667789999999999986431 223333333 444676655421
Q ss_pred CCCceEEEEEec
Q 044932 674 QDKEGILCAQKT 685 (689)
Q Consensus 674 ~~~E~iL~~~K~ 685 (689)
...+++++|+|+
T Consensus 214 ~~~DG~~i~~~~ 225 (248)
T 3tfw_A 214 KGWDGFTLAWVN 225 (248)
T ss_dssp TCSEEEEEEEEC
T ss_pred CCCCeeEEEEEe
Confidence 235789999875
No 381
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.11 E-value=0.00085 Score=64.34 Aligned_cols=128 Identities=15% Similarity=0.127 Sum_probs=72.6
Q ss_pred eEEeecCCcchhHHHHhccC---CceEEEeccCCC-CCchhhh----hccccch---hh-ccccCCCCCCC----ccchh
Q 044932 548 RNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHA-PDTLPVI----YDRGLVG---IY-HDWCESFGTYP----RSYDL 611 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~-~~tL~vI----~~RGLig---~y-hdwce~f~typ----rTyDL 611 (689)
.+|+|+++|.|+++.+|... .. .|+-++- +..+... -..|+-. +. .|..+.++.++ .+||+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 57999999999999998764 22 2444432 2223222 1224321 11 22223222222 57999
Q ss_pred hccccccccccCCcCCccceeeeeccccccCcEEEEeCchh------------hHHHHHHHH----hhcceeEEEee---
Q 044932 612 LHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE------------ILDPLEGIL----RSLHWEIRMTY--- 672 (689)
Q Consensus 612 lHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~------------~l~~v~~i~----~~lrW~~~~~~--- 672 (689)
|..++.... ...+|-++-|+|||||++++.+-.- ....++.+. ..-+|.+.+.-
T Consensus 137 v~~d~~~~~-------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 209 (223)
T 3duw_A 137 IFIDADKQN-------NPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVG 209 (223)
T ss_dssp EEECSCGGG-------HHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEE
T ss_pred EEEcCCcHH-------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccC
Confidence 987765332 2346777889999999999975332 122333333 34456665542
Q ss_pred cCCCceEEEEEec
Q 044932 673 AQDKEGILCAQKT 685 (689)
Q Consensus 673 ~~~~E~iL~~~K~ 685 (689)
..+.+++++|+++
T Consensus 210 ~~~~dG~~~~~~~ 222 (223)
T 3duw_A 210 SKGYDGFIMAVVK 222 (223)
T ss_dssp TTEEEEEEEEEEC
T ss_pred CCCCCeeEEEEEe
Confidence 2335788988864
No 382
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=96.09 E-value=0.0013 Score=68.26 Aligned_cols=98 Identities=17% Similarity=0.278 Sum_probs=62.6
Q ss_pred CCCCeeEEeecCCcchhHHHHhcc--CCceEEEeccCCCCCchh--hhhccccch----hhccccCCCCCCCccchhhcc
Q 044932 543 DWSKIRNVMDMKSIYGGFAAALAQ--QKIWVMNVVPVHAPDTLP--VIYDRGLVG----IYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 543 ~~~~iRNvmDMna~~GgFAAal~~--~~vWVMNvvp~~~~~tL~--vI~~RGLig----~yhdwce~f~typrTyDLlHa 614 (689)
++.....|+|+++|.|.++.+|.. ..+-+ +-++-+..+. .+-..|+-+ +-+|.. ...| +||+|.+
T Consensus 181 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~---~~~p-~~D~v~~ 253 (348)
T 3lst_A 181 DFPATGTVADVGGGRGGFLLTVLREHPGLQG---VLLDRAEVVARHRLDAPDVAGRWKVVEGDFL---REVP-HADVHVL 253 (348)
T ss_dssp CCCSSEEEEEETCTTSHHHHHHHHHCTTEEE---EEEECHHHHTTCCCCCGGGTTSEEEEECCTT---TCCC-CCSEEEE
T ss_pred CccCCceEEEECCccCHHHHHHHHHCCCCEE---EEecCHHHhhcccccccCCCCCeEEEecCCC---CCCC-CCcEEEE
Confidence 345678999999999999999975 23322 2222121000 011123322 223433 3456 9999999
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.++|..+.+.-. ..+|-++=|+|+|||.++|-|
T Consensus 254 ~~vlh~~~d~~~--~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 254 KRILHNWGDEDS--VRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp ESCGGGSCHHHH--HHHHHHHHHTCCTTCEEEEEE
T ss_pred ehhccCCCHHHH--HHHHHHHHHhcCCCCEEEEEE
Confidence 999988765321 258999999999999999965
No 383
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.08 E-value=0.00095 Score=63.44 Aligned_cols=97 Identities=20% Similarity=0.227 Sum_probs=60.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----c--cchhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----G--LVGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----G--Lig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|+|+++|.|.++..|....- +|+-++- +..+...-.+ | +--+..|..+ ++.-+.+||+|.+..++..
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESCGGG
T ss_pred CeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CCCCCCcEEEEEEcCchHh
Confidence 4799999999999999876643 3444443 2222222221 1 1112223332 3433579999999887443
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEeCc
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVRDK 650 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iirD~ 650 (689)
+.. -+ ...+|-++-|+|+|||.+++-+.
T Consensus 116 ~~~-~~-~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 116 FEP-LE-LNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCH-HH-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCH-HH-HHHHHHHHHHHcCCCcEEEEEec
Confidence 321 12 24578899999999999998754
No 384
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.08 E-value=0.00099 Score=64.32 Aligned_cols=129 Identities=16% Similarity=0.143 Sum_probs=74.9
Q ss_pred eeEEeecCCcchhHHHHhccC--CceEEEeccCCCC-Cchhhhh----ccccch---h-hccccCCCCCCC-----ccch
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAP-DTLPVIY----DRGLVG---I-YHDWCESFGTYP-----RSYD 610 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~-~tL~vI~----~RGLig---~-yhdwce~f~typ-----rTyD 610 (689)
-++|+|+++|.|.++..|... +-. .|+-++.. ..+.+.- ..|+-. + ..|..+.++.++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA--RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC--EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 468999999999999988762 111 23333332 2232221 224321 1 224444455555 6999
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeCch-----hhHHHHHHHHhhcceeEEEee-----cCCCceEE
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-----EILDPLEGILRSLHWEIRMTY-----AQDKEGIL 680 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~-----~~l~~v~~i~~~lrW~~~~~~-----~~~~E~iL 680 (689)
+|..++....+.. ...++.++ |+|+|||.+++.|-. +++..++ ..=++.+.+.. ....+++.
T Consensus 137 ~V~~d~~~~~~~~----~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~dG~~ 208 (221)
T 3u81_A 137 MVFLDHWKDRYLP----DTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR---GSSSFECTHYSSYLEYMKVVDGLE 208 (221)
T ss_dssp EEEECSCGGGHHH----HHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH---HCTTEEEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCcccchH----HHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh---hCCCceEEEcccccccCCCCCceE
Confidence 9988876655421 12345567 999999999998643 3444333 33356665542 12246788
Q ss_pred EEEec
Q 044932 681 CAQKT 685 (689)
Q Consensus 681 ~~~K~ 685 (689)
++++.
T Consensus 209 ~~~~~ 213 (221)
T 3u81_A 209 KAIYQ 213 (221)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 87763
No 385
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.08 E-value=0.0036 Score=56.94 Aligned_cols=109 Identities=11% Similarity=0.079 Sum_probs=71.8
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhh----cccc--ch-hhccccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIY----DRGL--VG-IYHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~----~RGL--ig-~yhdwce~f~typrTyDLlHa~~lfs 619 (689)
..|+|+++|.|.++.+|..... +|+-++- +..+...- ..|+ +- +..|+.+.|+. .+||+|.+++.
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~-- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT-- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC--
T ss_pred CEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc--
Confidence 4799999999999999987332 2333332 12222221 1232 11 22344443322 58999998887
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEEEe
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIRMT 671 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~~~ 671 (689)
.. +..+|-++-|+ |||.+++-+ ..+-+.++..+++...|++...
T Consensus 110 -----~~-~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 -----KN-IEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp -----SC-HHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred -----cc-HHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 33 36678888888 999999986 6777888888888888888765
No 386
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.02 E-value=0.0019 Score=61.93 Aligned_cols=118 Identities=15% Similarity=0.135 Sum_probs=70.2
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhh----cccc--chhh-ccccCCCC--CCCccchhhcccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIY----DRGL--VGIY-HDWCESFG--TYPRSYDLLHADH 616 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~----~RGL--ig~y-hdwce~f~--typrTyDLlHa~~ 616 (689)
..|+|+++|.|.|+.+|... |-+ +|+-++-. ..+...- ..|+ |-++ .|+.+ ++ .-+.+||+|.++.
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI--NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS--EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEES
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC--CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEEC
Confidence 35999999999999888653 211 34444432 2332221 2233 2222 23322 33 2357899999874
Q ss_pred cccccc-----CCcCCccceeeeeccccccCcEEEEe-CchhhHHHHHHHHhhcceeEE
Q 044932 617 LFSRLK-----SRCRQPVSIVVEMDRILRPGGWAIVR-DKVEILDPLEGILRSLHWEIR 669 (689)
Q Consensus 617 lfs~~~-----~~c~~~~~illEmDRILRP~G~~iir-D~~~~l~~v~~i~~~lrW~~~ 669 (689)
.....+ .+-. ...+|-++-|+|+|||.+++. |..+....+..++....|...
T Consensus 120 ~~~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLT-YKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp CCCCCSGGGGGGSTT-SHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCccccchhhhccC-CHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 321111 1112 246888999999999999997 465677777777766667653
No 387
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=96.02 E-value=0.002 Score=65.99 Aligned_cols=129 Identities=13% Similarity=0.151 Sum_probs=80.3
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCCCchhhhhc----ccc----chhhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAPDTLPVIYD----RGL----VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~~tL~vI~~----RGL----ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++.+|... |-. .++-++-+..+...-. .|+ --+-+|..+ .+|..||+|.+..+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~~~vl 243 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSA--RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNGDIYLLSRII 243 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTC--EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSCSEEEEESCG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCC--EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCCCEEEEchhc
Confidence 89999999999999998753 211 2222332444433222 232 112344444 367889999999999
Q ss_pred ccccCC-cCCccceeeeeccccccCcEEEEeCch-------------h------------hHHHHHHHHhhcceeEE-Ee
Q 044932 619 SRLKSR-CRQPVSIVVEMDRILRPGGWAIVRDKV-------------E------------ILDPLEGILRSLHWEIR-MT 671 (689)
Q Consensus 619 s~~~~~-c~~~~~illEmDRILRP~G~~iirD~~-------------~------------~l~~v~~i~~~lrW~~~-~~ 671 (689)
..+.+. |. .+|-++-|+|+|||.++|-|.. + ....++.++..-.+... +.
T Consensus 244 ~~~~~~~~~---~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 244 GDLDEAASL---RLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp GGCCHHHHH---HHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCHHHHH---HHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 877542 32 5889999999999999987521 0 13345556655566542 22
Q ss_pred ecCCCceEEEEEe
Q 044932 672 YAQDKEGILCAQK 684 (689)
Q Consensus 672 ~~~~~E~iL~~~K 684 (689)
.......|+.|+|
T Consensus 321 ~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 321 DLPMETRMIVAAR 333 (334)
T ss_dssp EETTTEEEEEEEE
T ss_pred ECCCCCEEEEEEe
Confidence 2233467888876
No 388
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=95.99 E-value=0.002 Score=66.88 Aligned_cols=97 Identities=14% Similarity=0.124 Sum_probs=60.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCchh----hhhcccc---chhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTLP----VIYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL~----vI~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|||+++|.|.++..+...+.- .|+-++....+. .+...|+ |-+.+.-.+.++.-+..||+|.+..++..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~--~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CEEEEecCccHHHHHHHHHCCCC--EEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 47999999999998888765431 233333322222 2223354 33344333444322389999999866554
Q ss_pred ccCCcCCccceeeeeccccccCcEEEE
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIV 647 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~ii 647 (689)
....-. +..+|-+++|+|+|||.+++
T Consensus 118 l~~~~~-~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 118 LLYESM-MDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BSTTCC-HHHHHHHHHHHEEEEEEEES
T ss_pred cccHHH-HHHHHHHHHhhcCCCeEEEE
Confidence 444334 46788899999999999983
No 389
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.97 E-value=0.0026 Score=65.75 Aligned_cols=133 Identities=22% Similarity=0.345 Sum_probs=80.9
Q ss_pred CCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchhhhh----ccccc----hhhccccCCCCCCCccchhhcc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLPVIY----DRGLV----GIYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~vI~----~RGLi----g~yhdwce~f~typrTyDLlHa 614 (689)
..-..|+|+++|.|.++.+|... .+- ++-++-+..+...- ..|+- =+-+|+.+ .+|..||+|.+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVS---ATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE---PLPRKADAIIL 255 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS---CCSSCEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCE---EEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC---CCCCCccEEEE
Confidence 34568999999999999988753 232 22222233333222 22332 12334444 35667999999
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeCch--------h------------------hHHHHHHHHhhcceeE
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV--------E------------------ILDPLEGILRSLHWEI 668 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~--------~------------------~l~~v~~i~~~lrW~~ 668 (689)
.++|..+.+.-. ..+|-++-|+|+|||.++|-|.. . ....++.++..-.++.
T Consensus 256 ~~vl~~~~~~~~--~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 333 (360)
T 1tw3_A 256 SFVLLNWPDHDA--VRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVV 333 (360)
T ss_dssp ESCGGGSCHHHH--HHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred cccccCCCHHHH--HHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeE
Confidence 999877654211 24788999999999999987543 0 1345566666666665
Q ss_pred EEe-ecCCC-----ceEEEEEec
Q 044932 669 RMT-YAQDK-----EGILCAQKT 685 (689)
Q Consensus 669 ~~~-~~~~~-----E~iL~~~K~ 685 (689)
.-. ..... ..|+.|+|.
T Consensus 334 ~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 334 EEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEEeCCCCcccCccEEEEEEeC
Confidence 322 22222 567888774
No 390
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.96 E-value=0.0026 Score=61.76 Aligned_cols=95 Identities=21% Similarity=0.286 Sum_probs=58.3
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhc----ccc-chhh-ccccCCCCCCCccchhhcccc-cc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYD----RGL-VGIY-HDWCESFGTYPRSYDLLHADH-LF 618 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~----RGL-ig~y-hdwce~f~typrTyDLlHa~~-lf 618 (689)
-..|+|+++|.|.++..|..... +|+-++.. ..|...-. .|+ |-+. .|..+ ++ ++.+||+|.+.. .+
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFSTI 116 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSSGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCCch
Confidence 35899999999999999987753 45555432 33322221 232 1112 23322 33 468899997642 22
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEe
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
... ..-. +..+|-++-|+|+|||.+++.
T Consensus 117 ~~~-~~~~-~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 117 MYF-DEED-LRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGS-CHHH-HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC-CHHH-HHHHHHHHHHHcCCCeEEEEe
Confidence 222 2222 256788999999999999985
No 391
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.95 E-value=0.0044 Score=62.05 Aligned_cols=157 Identities=18% Similarity=0.086 Sum_probs=86.2
Q ss_pred hhhHHHHHHHHHhhhcccCCCCCCeeEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchh----hhhcccc--chh
Q 044932 523 SDTRHWKAIVDRSYLTGLGIDWSKIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLP----VIYDRGL--VGI 594 (689)
Q Consensus 523 ~D~~~W~~~v~~~y~~~l~~~~~~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~----vI~~RGL--ig~ 594 (689)
.....|.+++-.+......+....-..|+|+++|.|.++.+|... +-+ .|+-++.. .-+. .+-.-|| |=+
T Consensus 57 ~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~l~~v~~ 134 (249)
T 3g89_A 57 GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPEL--ELVLVDATRKKVAFVERAIEVLGLKGARA 134 (249)
T ss_dssp CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHCTTC--EEEEEESCHHHHHHHHHHHHHHTCSSEEE
T ss_pred CHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCceEE
Confidence 344677776654332111111123457999999999887776532 222 23333322 2221 2222354 333
Q ss_pred hccccCCCC---CCCccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeCc---hhhHHHHHHHHhhcceeE
Q 044932 595 YHDWCESFG---TYPRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK---VEILDPLEGILRSLHWEI 668 (689)
Q Consensus 595 yhdwce~f~---typrTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~---~~~l~~v~~i~~~lrW~~ 668 (689)
+|.-.+.++ .++.+||+|-+..+ .. +..++-++-|+|+|||.+++-.. .+-+..+...+..+.|..
T Consensus 135 ~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~-~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 135 LWGRAEVLAREAGHREAYARAVARAV-------AP-LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRL 206 (249)
T ss_dssp EECCHHHHTTSTTTTTCEEEEEEESS-------CC-HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEE
T ss_pred EECcHHHhhcccccCCCceEEEECCc-------CC-HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeE
Confidence 343334333 35689999987654 23 25677789999999998887543 445566666667777775
Q ss_pred EEee---c--CCCc-eEEEEEeccCCC
Q 044932 669 RMTY---A--QDKE-GILCAQKTMWRP 689 (689)
Q Consensus 669 ~~~~---~--~~~E-~iL~~~K~~w~p 689 (689)
.-.. . .+.+ .+++.+|.-.+|
T Consensus 207 ~~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 207 GEVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EEEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 3321 1 1223 466667654443
No 392
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.93 E-value=0.028 Score=58.54 Aligned_cols=126 Identities=15% Similarity=0.161 Sum_probs=78.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc--cccc---hh-hcccc-CCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD--RGLV---GI-YHDWC-ESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~--RGLi---g~-yhdwc-e~f~typrTyDLlHa~~lfs 619 (689)
+.|||+++|+|+|+..|...+. -.|+-++- ++-|-.-.. ..++ .+ ..... +.|+ ..+||++-++-.|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~--~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFT--EGLPSFASIDVSFI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCT--TCCCSEEEECCSSS
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCC--CCCCCEEEEEeeHh
Confidence 5799999999999988876642 12444443 344433111 0111 00 01111 2222 23599999888776
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEe---------Cc-------------hhhHHHHHHHHhhcceeEEEee-c---
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVR---------DK-------------VEILDPLEGILRSLHWEIRMTY-A--- 673 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iir---------D~-------------~~~l~~v~~i~~~lrW~~~~~~-~--- 673 (689)
. +..+|-||-|+|+|||.+++= +. ..++.+|..++....|.+.-.. +
T Consensus 163 s-------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~ 235 (291)
T 3hp7_A 163 S-------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQ 235 (291)
T ss_dssp C-------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSC
T ss_pred h-------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 3 256899999999999998774 11 1377889999989999875442 1
Q ss_pred ---CCCceEEEEEe
Q 044932 674 ---QDKEGILCAQK 684 (689)
Q Consensus 674 ---~~~E~iL~~~K 684 (689)
.+.|=++.++|
T Consensus 236 g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 236 GGHGNIEFLAHLEK 249 (291)
T ss_dssp CGGGCCCEEEEEEE
T ss_pred CCCcCHHHHHHhhh
Confidence 23466666666
No 393
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=95.91 E-value=0.013 Score=56.04 Aligned_cols=80 Identities=10% Similarity=0.022 Sum_probs=49.0
Q ss_pred CCeEEEECCccc-hhHHHhhc-C--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCC--CCcceEEecccc
Q 044932 309 IRVVLEIGSADL-SFVASLLA-K--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPS--GVFDAIHCDGCS 382 (689)
Q Consensus 309 ~R~VLDVGCGtG-sfaa~La~-~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD--~SFDlVhcs~cl 382 (689)
..+|||||||.| ..|.+|++ . .|+++|++|.... +..-|.-. |..+ ..||+|.+.+.-
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRPP 99 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESCC
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCCC
Confidence 358999999999 68999975 4 4899999985321 22222211 3332 389999876532
Q ss_pred ccccccHHHHHHHHHhccCCCcEEEEEc
Q 044932 383 ITWHAHGGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 383 i~W~~d~~~aL~EI~RVLRPGG~fVIsd 410 (689)
.+....+.++.+-+ |.-++|..
T Consensus 100 ----~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 100 ----AEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp ----TTTHHHHHHHHHHH--TCEEEEEC
T ss_pred ----HHHHHHHHHHHHHc--CCCEEEEc
Confidence 23345555655543 34455543
No 394
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=95.91 E-value=0.0013 Score=66.73 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=61.1
Q ss_pred eeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccc-------------cchhhccccCCCC------CCC
Q 044932 547 IRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRG-------------LVGIYHDWCESFG------TYP 606 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RG-------------Lig~yhdwce~f~------typ 606 (689)
-..|+|+++|.|+++..|...+.. +|+-++-. ..|...-.|- -+-..+.=++.++ .-+
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 457999999999999999865432 34444432 2332222220 0112222233332 234
Q ss_pred ccchhhccccccccc-cCCcCCccceeeeeccccccCcEEEEeC
Q 044932 607 RSYDLLHADHLFSRL-KSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 607 rTyDLlHa~~lfs~~-~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+||+|-+..+|... .+.-. ...+|-++-|+|+|||.+++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~-~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQ-ADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHH-HHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHH-HHHHHHHHHHHhCCCcEEEEec
Confidence 599999988776433 23223 2467899999999999999874
No 395
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.89 E-value=0.0017 Score=66.56 Aligned_cols=132 Identities=17% Similarity=0.245 Sum_probs=82.4
Q ss_pred CCCCeeEEeecCCcchhHHHHhcc--CCceEEEeccCCCCCchhh----hhccccch----hhccccCCCCCCCccchhh
Q 044932 543 DWSKIRNVMDMKSIYGGFAAALAQ--QKIWVMNVVPVHAPDTLPV----IYDRGLVG----IYHDWCESFGTYPRSYDLL 612 (689)
Q Consensus 543 ~~~~iRNvmDMna~~GgFAAal~~--~~vWVMNvvp~~~~~tL~v----I~~RGLig----~yhdwce~f~typrTyDLl 612 (689)
++.....|+|.++|.|.++.+|.+ ..+-+. -++-|..+.. +.+.|+-+ +-+|..++ +|-.||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~p~~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGT---VLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDP---LPAGAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEE---EEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSC---CCCSCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEE---EecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCC---CCCCCcEE
Confidence 445678999999999999999875 222222 1122323222 22234322 22344444 45589999
Q ss_pred ccccccccccCC-cCCccceeeeeccccccCcEEEEeCch----------h------------hHHHHHHHHhhcceeEE
Q 044932 613 HADHLFSRLKSR-CRQPVSIVVEMDRILRPGGWAIVRDKV----------E------------ILDPLEGILRSLHWEIR 669 (689)
Q Consensus 613 Ha~~lfs~~~~~-c~~~~~illEmDRILRP~G~~iirD~~----------~------------~l~~v~~i~~~lrW~~~ 669 (689)
.+.++|..+.+. |. .+|-++=|+|+|||+++|-|.. + ....++.++..-.++..
T Consensus 240 ~~~~vlh~~~~~~~~---~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 316 (332)
T 3i53_A 240 VLSAVLHDWDDLSAV---AILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR 316 (332)
T ss_dssp EEESCGGGSCHHHHH---HHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE
T ss_pred EEehhhccCCHHHHH---HHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE
Confidence 999999887654 33 4899999999999999997631 0 13456666666666653
Q ss_pred E-eecCCCceEEEEEe
Q 044932 670 M-TYAQDKEGILCAQK 684 (689)
Q Consensus 670 ~-~~~~~~E~iL~~~K 684 (689)
- ..... ..|+.|+|
T Consensus 317 ~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 317 AAHPISY-VSIVEMTA 331 (332)
T ss_dssp EEEECSS-SEEEEEEE
T ss_pred EEEECCC-cEEEEEee
Confidence 2 22233 66777765
No 396
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.85 E-value=0.14 Score=57.22 Aligned_cols=133 Identities=13% Similarity=0.077 Sum_probs=72.5
Q ss_pred HHHHHhhcccccCCCCCCeEEEECCccchhHHHhh-----------------cCCeEEEEcCCcccHHHHHHHHHHcCCC
Q 044932 293 LESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLL-----------------AKEVLTLTVGLKDDLVDLAQVALERGFP 355 (689)
Q Consensus 293 id~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La-----------------~~~V~gmDIsp~D~seamlq~A~eRGL~ 355 (689)
++.|.+++.. . ...+|+|-+||+|+|..... ...++|+++.+....-+...... +|+.
T Consensus 206 v~lmv~l~~p---~-~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l-hg~~ 280 (530)
T 3ufb_A 206 VRFMVEVMDP---Q-LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL-HGLE 280 (530)
T ss_dssp HHHHHHHHCC---C-TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH-HTCS
T ss_pred HHHHHHhhcc---C-CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh-cCCc
Confidence 4555565531 1 34689999999999864332 23588999887432222222222 3443
Q ss_pred -cEEecCCCCCCCC----CCCCcceEEeccc-ccccc-------------ccH-HHHHHHHHhccC-------CCcEEEE
Q 044932 356 -AVVSPLGNRRLPF----PSGVFDAIHCDGC-SITWH-------------AHG-GKLLLEMNRILR-------PSGYFIL 408 (689)
Q Consensus 356 -~i~~~~dt~~LPF----pD~SFDlVhcs~c-li~W~-------------~d~-~~aL~EI~RVLR-------PGG~fVI 408 (689)
..+...++...|+ +...||+|++.-= ...|. .+. -.++.-+.+.|| |||++.+
T Consensus 281 ~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~av 360 (530)
T 3ufb_A 281 YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAV 360 (530)
T ss_dssp CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEE
T ss_pred cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEE
Confidence 2344445544443 3457999998510 00010 111 134556667675 7999999
Q ss_pred EcCCCchh---HHHHHHHHHHhcce
Q 044932 409 STKHDSIE---EEEALTTLTASICW 430 (689)
Q Consensus 409 sdp~~~le---~~~~ie~La~~l~W 430 (689)
..|+..+. ....+++.+-.-++
T Consensus 361 VlP~g~Lf~~~~~~~iRk~Lle~~~ 385 (530)
T 3ufb_A 361 VVPNGTLFSDGISARIKEELLKNFN 385 (530)
T ss_dssp EEEHHHHHCCTHHHHHHHHHHHHSE
T ss_pred EecchhhhccchHHHHHHHHhhcCE
Confidence 99876552 12335544433344
No 397
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=95.83 E-value=0.00082 Score=67.73 Aligned_cols=95 Identities=11% Similarity=0.169 Sum_probs=60.2
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----cc-----chhhccccCCCCCCCccchhhccc-cc
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----GL-----VGIYHDWCESFGTYPRSYDLLHAD-HL 617 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----GL-----ig~yhdwce~f~typrTyDLlHa~-~l 617 (689)
.|||+++|.|.|+.+|..... +|+-++- +..|...-.+ |+ |-+.+.=.+.++. +.+||+|.+. .+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 699999999999999988753 3444443 2333322222 21 2222222333554 8999998854 44
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
|.. .+.-. +..+|-+|-|+|||||.++|..
T Consensus 161 ~~~-~~~~~-~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 161 INE-LDEAD-RRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HTT-SCHHH-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc-CCHHH-HHHHHHHHHHHcCCCcEEEEEe
Confidence 543 33222 2568899999999999999974
No 398
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.79 E-value=0.003 Score=60.22 Aligned_cols=91 Identities=19% Similarity=0.146 Sum_probs=54.8
Q ss_pred eEEeecCCcchhHHHHhccC---CceEEEeccCCCC-Cchhh----hhccccch---hhc-cccCCCCCCCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHAP-DTLPV----IYDRGLVG---IYH-DWCESFGTYPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~~-~tL~v----I~~RGLig---~yh-dwce~f~typrTyDLlHa~ 615 (689)
++|+|+++|.|.++.+|... .. .|+-++-. ..+.+ +-..|+-. +++ |..+.++..+. ||+|.++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 47999999999999988754 21 23333321 22221 12224321 222 33343455567 9999776
Q ss_pred cccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 616 HLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.- ... ...++-++-|+|+|||.+++.+
T Consensus 134 ~~------~~~-~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD------VFN-GADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT------TSC-HHHHHHHHGGGEEEEEEEEEES
T ss_pred CC------hhh-hHHHHHHHHHhcCCCeEEEEEC
Confidence 32 122 2456778889999999999975
No 399
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.79 E-value=0.0019 Score=61.63 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=62.4
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhhcc----cc-------chhhc-cccCCCCCCCccchhhc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIYDR----GL-------VGIYH-DWCESFGTYPRSYDLLH 613 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~~R----GL-------ig~yh-dwce~f~typrTyDLlH 613 (689)
..|+|+++|.|.|+.+|... +.. +|+-++- +..+.....+ |+ |-+++ |. +.++..+.+||+|-
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFE--QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCS--EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCC--EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEEe
Confidence 47999999999999999864 211 2333332 2333322222 22 11111 22 22233346999999
Q ss_pred cccccccccCCcCCccceeeeeccccccCcEEEEeCchh
Q 044932 614 ADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE 652 (689)
Q Consensus 614 a~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~ 652 (689)
+..+|....+ -. +..+|-++-|+|+|||++++-+..+
T Consensus 108 ~~~~l~~~~~-~~-~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 108 VIEVIEHLDL-SR-LGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp EESCGGGCCH-HH-HHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred eHHHHHcCCH-HH-HHHHHHHHHHHcCCCEEEEEccCcc
Confidence 9999987632 22 2457889999999999998876654
No 400
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=95.76 E-value=0.026 Score=56.03 Aligned_cols=126 Identities=16% Similarity=0.143 Sum_probs=74.6
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc-c------cchhhcccc-CCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR-G------LVGIYHDWC-ESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R-G------Lig~yhdwc-e~f~typrTyDLlHa~~lf 618 (689)
..|||+++|.|+|+..|...... .|+-++- ++-|..-..+ . ...+ ...+ +.++.- -+|.+-.+.+|
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~d~~~~D~v~ 113 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNF-RNAVLADFEQG--RPSFTSIDVSF 113 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCG-GGCCGGGCCSC--CCSEEEECCSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceE-EEeCHhHcCcC--CCCEEEEEEEh
Confidence 46999999999999988876532 3444443 3444331111 1 1111 1112 333320 13555555555
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEe-------------------Cc---hhhHHHHHHHHhhcceeEEEeec---
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVR-------------------DK---VEILDPLEGILRSLHWEIRMTYA--- 673 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iir-------------------D~---~~~l~~v~~i~~~lrW~~~~~~~--- 673 (689)
+.. ..+|-|+-|+|+|||.+++- |. ...+..+..++....|.+.-.+.
T Consensus 114 ~~l-------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi 186 (232)
T 3opn_A 114 ISL-------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPI 186 (232)
T ss_dssp SCG-------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSS
T ss_pred hhH-------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccC
Confidence 543 45899999999999998874 11 12567788888888888754421
Q ss_pred ----CCCceEEEEEec
Q 044932 674 ----QDKEGILCAQKT 685 (689)
Q Consensus 674 ----~~~E~iL~~~K~ 685 (689)
.+-|-+|.++|.
T Consensus 187 ~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 187 KGGAGNVEFLVHLLKD 202 (232)
T ss_dssp CBTTTBCCEEEEEEES
T ss_pred CCCCCCHHHHHHHhhc
Confidence 234678888773
No 401
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.76 E-value=0.0012 Score=64.33 Aligned_cols=99 Identities=15% Similarity=0.047 Sum_probs=56.8
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----cc-chhhc-cccCCC-CCCCccchhhccc-ccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GL-VGIYH-DWCESF-GTYPRSYDLLHAD-HLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GL-ig~yh-dwce~f-~typrTyDLlHa~-~lf 618 (689)
..|||+++|.|.++..|.....- +|+-++.. .-|...-.+ |. +-+++ |+.+-. +.-+.+||+|.++ ..+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 46999999999999999775432 44444432 333222222 11 11111 222211 2235799999883 221
Q ss_pred cc-ccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SR-LKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~-~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+. ..+.-. ...+|-|+-|+|||||.+++-+
T Consensus 140 ~~~~~~~~~-~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 140 SEETWHTHQ-FNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGGGTTTHH-HHHHHHTHHHHEEEEEEEEECC
T ss_pred chhhhhhhh-HHHHHHHHHHhcCCCeEEEEEe
Confidence 11 111112 2356889999999999999865
No 402
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.71 E-value=0.0034 Score=66.51 Aligned_cols=97 Identities=22% Similarity=0.225 Sum_probs=62.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCch----hhhhcccc---chhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTL----PVIYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL----~vI~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|||+++|.|.++..|..... -.|+-++..+-+ ..+-..|+ |-+++.=.+.++ +|..||+|.+..++..
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~~~~ 141 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGA--RKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWMGYF 141 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC--SEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCCBTT
T ss_pred CEEEEeccCcCHHHHHHHhcCC--CEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcChhhc
Confidence 5799999999999988876642 123433333222 22333444 334443334443 5699999999665443
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEe
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
....-. +..++-+++|+|+|||.+|+.
T Consensus 142 l~~e~~-~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 142 LLRESM-FDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTTCT-HHHHHHHHHHHEEEEEEEESS
T ss_pred ccchHH-HHHHHHHHHhhCCCCeEEEEe
Confidence 333233 466888999999999999876
No 403
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=95.71 E-value=0.0016 Score=65.72 Aligned_cols=39 Identities=10% Similarity=0.195 Sum_probs=33.4
Q ss_pred CccchhhccccccccccCCcCCccceeeeeccccccCcEEEEe
Q 044932 606 PRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 606 prTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
+.+||+|++..+|-.+.+. ...|-||-|+|+|||+++|-
T Consensus 133 ~~~fD~V~~~~~l~~~~d~----~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDI----PATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGCSCH----HHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecCCH----HHHHHHHHHHcCCCcEEEEE
Confidence 5899999999999877643 45799999999999999985
No 404
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.70 E-value=0.019 Score=59.45 Aligned_cols=124 Identities=16% Similarity=0.087 Sum_probs=65.3
Q ss_pred ccchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHH-cCCCcEE
Q 044932 284 EFKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALE-RGFPAVV 358 (689)
Q Consensus 284 ~F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~e-RGL~~i~ 358 (689)
.|..++..-+..|.+-. .++ +..+|||+||+.|+|+.+.+.. .|.|..+.. |.+ ...+... .|...+.
T Consensus 53 ~yRSRAayKL~EIdeK~-lik---pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~-D~~--~~P~~~~~~Gv~~i~ 125 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERR-FVQ---PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGG-PGH--EEPMLMQSYGWNIVT 125 (269)
T ss_dssp CCSSTHHHHHHHHHHTT-SCC---CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCS-TTS--CCCCCCCSTTGGGEE
T ss_pred CcccHHHHHHHHHHHcC-CCC---CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcc-ccc--cCCCcccCCCceEEE
Confidence 35555554455555542 344 3579999999999999988775 234554443 210 0000000 1222222
Q ss_pred -ecC-CCCCCCCCCCCcceEEecc--ccccccccHH---HHHHHHHhccCCCc-EEEEEcCCCchh
Q 044932 359 -SPL-GNRRLPFPSGVFDAIHCDG--CSITWHAHGG---KLLLEMNRILRPSG-YFILSTKHDSIE 416 (689)
Q Consensus 359 -~~~-dt~~LPFpD~SFDlVhcs~--cli~W~~d~~---~aL~EI~RVLRPGG-~fVIsdp~~~le 416 (689)
... |... .+...||+|+|-. +.-++.-|.. .+|.=+.++|+||| .|++-.-..+..
T Consensus 126 ~~~G~Df~~--~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~ 189 (269)
T 2px2_A 126 MKSGVDVFY--KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMP 189 (269)
T ss_dssp EECSCCGGG--SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSH
T ss_pred eeccCCccC--CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCch
Confidence 112 3333 2346899999842 1111111221 23433448999999 888876555443
No 405
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.65 E-value=0.022 Score=60.05 Aligned_cols=133 Identities=17% Similarity=0.102 Sum_probs=70.4
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHH-HHHHHHHcCCC-cEE
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVD-LAQVALERGFP-AVV 358 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~sea-mlq~A~eRGL~-~i~ 358 (689)
|..++..-+..|.+.. .+. ...+|||+||++|+|+.+.+.. .|.|+|+-.....+. +.+ ..+-. +.+
T Consensus 75 y~SR~~~KL~ei~~~~-~l~---~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~---ql~w~lV~~ 147 (321)
T 3lkz_A 75 PVSRGTAKLRWLVERR-FLE---PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQ---SYGWNIVTM 147 (321)
T ss_dssp CSSTHHHHHHHHHHTT-SCC---CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCC---BTTGGGEEE
T ss_pred ccchHHHHHHHHHHhc-CCC---CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhh---hcCCcceEE
Confidence 4444443344444432 233 3459999999999999866643 388999876421100 000 01111 112
Q ss_pred e-cCCCCCCCCCCCCcceEEeccc---cccccccH--HHHHHHHHhccCCC-cEEEEEcCCCchhHH-HHHHHHHH
Q 044932 359 S-PLGNRRLPFPSGVFDAIHCDGC---SITWHAHG--GKLLLEMNRILRPS-GYFILSTKHDSIEEE-EALTTLTA 426 (689)
Q Consensus 359 ~-~~dt~~LPFpD~SFDlVhcs~c---li~W~~d~--~~aL~EI~RVLRPG-G~fVIsdp~~~le~~-~~ie~La~ 426 (689)
. -.|...|+- ..+|+|+|-.. -.++.+.. ..+|.=+-+.|++| |-|++-.-.+|..+. +.++.+-.
T Consensus 148 ~~~~Dv~~l~~--~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~ 221 (321)
T 3lkz_A 148 KSGVDVFYRPS--ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQR 221 (321)
T ss_dssp ECSCCTTSSCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHH
T ss_pred EeccCHhhCCC--CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHH
Confidence 2 123344432 56999998532 11222111 12444456788999 999998766665443 33444433
No 406
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=95.64 E-value=0.0013 Score=67.78 Aligned_cols=97 Identities=16% Similarity=0.255 Sum_probs=63.7
Q ss_pred eeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchhh----hhccccch----hhccccCCCCCCCccchhhcccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLPV----IYDRGLVG----IYHDWCESFGTYPRSYDLLHADH 616 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~v----I~~RGLig----~yhdwce~f~typrTyDLlHa~~ 616 (689)
.+.|+|+++|.|.++.+|... .+-+. -++-|..+.. +-..|+-+ +-+|..+.-++.|..||+|.+.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQ---IWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEE---EEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEE---EEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 788999999999999998753 23222 2222333322 22234322 22333332112678899999999
Q ss_pred ccccccCC-cCCccceeeeeccccccCcEEEEeC
Q 044932 617 LFSRLKSR-CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 617 lfs~~~~~-c~~~~~illEmDRILRP~G~~iirD 649 (689)
+|..+.+. |. .+|-++-|+|+|||.++|-|
T Consensus 257 vlh~~~~~~~~---~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 257 CLHYFDAREAR---EVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp CGGGSCHHHHH---HHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCHHHHH---HHHHHHHHHcCCCCEEEEEE
Confidence 99887653 43 58899999999999999975
No 407
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.61 E-value=0.0051 Score=63.91 Aligned_cols=97 Identities=15% Similarity=0.322 Sum_probs=61.0
Q ss_pred CCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchhhhhc----cccch----hhccccCCCCCCCccchhhcc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLPVIYD----RGLVG----IYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~vI~~----RGLig----~yhdwce~f~typrTyDLlHa 614 (689)
.....|+|+++|.|.++.+|... .+-| +-++-+..+...-. .|+-+ +-+|..+. .+|. +|+|.+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v~~ 262 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDS---TILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAVLF 262 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEE---EEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeE---EEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEEEE
Confidence 45678999999999999999753 2222 22222333332222 24422 22333332 2343 499999
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..+|..+.+.-. ..+|-++-|+|+|||.++|-|
T Consensus 263 ~~vlh~~~d~~~--~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 263 CRILYSANEQLS--TIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ESCGGGSCHHHH--HHHHHHHHTTCCTTCEEEEEE
T ss_pred echhccCCHHHH--HHHHHHHHHhcCCCCEEEEEe
Confidence 999987765211 357899999999999998865
No 408
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.51 E-value=0.0018 Score=62.86 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=58.8
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhh----hhcccc---chhh-ccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGL---VGIY-HDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGL---ig~y-hdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|+++..|.... ..|+-++-. ..+.. +-..|+ |-+. .|+.+ ++ .+.+||+|.++..|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCCC
T ss_pred CEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCCc
Confidence 469999999999999998765 234444432 22221 122233 2122 22222 22 35699999999888
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
...... ...+.++-|+|+|||++++..
T Consensus 155 ~~~~~~----~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 155 GGPDYA----TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSGGGG----GSSSBCTTTSCSSCHHHHHHH
T ss_pred CCcchh----hhHHHHHHhhcCCcceeHHHH
Confidence 764432 235779999999999988774
No 409
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.46 E-value=0.0048 Score=59.43 Aligned_cols=109 Identities=10% Similarity=0.036 Sum_probs=67.1
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhh----ccccc---hhhc-cccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIY----DRGLV---GIYH-DWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~----~RGLi---g~yh-dwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++..|..... .|+-++- +..+...- ..|+- -+++ |..+.+... ..||+|-+++.+
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~ 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGG 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCC
T ss_pred CEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCcc
Confidence 5699999999999988876532 2443433 22332221 22332 1222 222223333 368888765522
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEE
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIR 669 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~ 669 (689)
. .. ++-++-|+|||||.+++.. ..+-+..+..+++...+++.
T Consensus 133 -------~-~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 133 -------S-QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLL 175 (204)
T ss_dssp -------C-HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEE
T ss_pred -------c-HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEE
Confidence 3 35 7889999999999999975 45677777777777666654
No 410
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=95.41 E-value=0.0072 Score=58.49 Aligned_cols=117 Identities=12% Similarity=0.094 Sum_probs=67.8
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhh----hhcccc--chhh-ccccCCCC--CCCccchhhcccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPV----IYDRGL--VGIY-HDWCESFG--TYPRSYDLLHADH 616 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~v----I~~RGL--ig~y-hdwce~f~--typrTyDLlHa~~ 616 (689)
..|+|+++|.|.|+.+|... |-+ ||+-++-. .-+.. +-..|+ |-+. .|..+ ++ .-+.+||+|++..
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~--~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDI--NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTS--EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEES
T ss_pred ceEEEEecCCCHHHHHHHHHCCCC--CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEEC
Confidence 35999999999999998753 322 45544432 22222 112243 1112 23322 22 2256889887532
Q ss_pred ccc-----cccCCcCCccceeeeeccccccCcEEEEe-CchhhHHHHHHHHhhcceeE
Q 044932 617 LFS-----RLKSRCRQPVSIVVEMDRILRPGGWAIVR-DKVEILDPLEGILRSLHWEI 668 (689)
Q Consensus 617 lfs-----~~~~~c~~~~~illEmDRILRP~G~~iir-D~~~~l~~v~~i~~~lrW~~ 668 (689)
-.. ....+-. ...+|-++-|+|+|||.++|. |..+....+..++....|..
T Consensus 117 ~~p~~~~~~~~~rl~-~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 117 SDPWPKKRHEKRRLT-YSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp CCCCCSGGGGGGSTT-SHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred CCCCcCccccccccC-cHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 111 1112222 256788999999999999987 56667777666665556654
No 411
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=95.36 E-value=0.011 Score=61.76 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=57.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCchhh----hhcccc---chhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTLPV----IYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL~v----I~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|||+++|.|.++..|...+.- .|+-++...-+.. +...|+ |-+++.=.+.++.-+.+||+|-+..+...
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~--~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 143 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAK--KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYF 143 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTT
T ss_pred CEEEEeeccCcHHHHHHHHcCCC--EEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhh
Confidence 47999999999999888766421 2333332222221 223343 23333323344322379999998764333
Q ss_pred ccCCcCCccceeeeeccccccCcEEE
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAI 646 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~i 646 (689)
....-. +..+|-++.|+|+|||.++
T Consensus 144 l~~~~~-~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 144 LLFESM-LDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTTCH-HHHHHHHHHHHEEEEEEEE
T ss_pred ccCHHH-HHHHHHHHHhhcCCCcEEE
Confidence 322223 3568889999999999998
No 412
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=95.35 E-value=0.0017 Score=65.08 Aligned_cols=62 Identities=15% Similarity=0.230 Sum_probs=45.1
Q ss_pred CccchhhccccccccccCCc-CCccceeeeeccccccCcEEEEeCch----------------hhHHHHHHHHhhcceeE
Q 044932 606 PRSYDLLHADHLFSRLKSRC-RQPVSIVVEMDRILRPGGWAIVRDKV----------------EILDPLEGILRSLHWEI 668 (689)
Q Consensus 606 prTyDLlHa~~lfs~~~~~c-~~~~~illEmDRILRP~G~~iirD~~----------------~~l~~v~~i~~~lrW~~ 668 (689)
+.+||+|-+..+|....... + +..+|-||-|+|||||+++|.+.. -....+..++..-.++.
T Consensus 172 ~~~fD~V~~~~~l~~~~~~~~~-~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 172 PLPADALVSAFCLEAVSPDLAS-FQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp CSSEEEEEEESCHHHHCSSHHH-HHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCCEEEehhhhhhhcCCHHH-HHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 46799999999887644332 3 366899999999999999986311 13567777777666654
No 413
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.26 E-value=0.0071 Score=61.47 Aligned_cols=133 Identities=17% Similarity=0.208 Sum_probs=79.0
Q ss_pred CeeEEeecCCcchhHHHHhccC-CceEEEeccCCCCCchhhh----hccccch----hhccccCCCCCCCccchhhcccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAPDTLPVI----YDRGLVG----IYHDWCESFGTYPRSYDLLHADH 616 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~~tL~vI----~~RGLig----~yhdwce~f~typrTyDLlHa~~ 616 (689)
.-..|+|+++|.|.++.+|... |-. .|+-++-+..+... -..|+-+ +-+|..+. .+|..||+|.+.+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~--~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~~ 240 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNA--EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLLPN 240 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTC--EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC--eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEEcc
Confidence 4568999999999999999754 211 23333322222211 1223322 12233321 3566799999999
Q ss_pred ccccccCCcCCccceeeeeccccccCcEEEEeCchh---------------------------hHHHHHHHHhhcceeE-
Q 044932 617 LFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE---------------------------ILDPLEGILRSLHWEI- 668 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~---------------------------~l~~v~~i~~~lrW~~- 668 (689)
+|..+.+.-. ..+|-++-|+|+|||+++|-|... ....++.++..-.++.
T Consensus 241 ~l~~~~~~~~--~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 241 FLHHFDVATC--EQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHS 318 (335)
T ss_dssp CGGGSCHHHH--HHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEE
T ss_pred hhccCCHHHH--HHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCee
Confidence 9887743211 357889999999999888864210 1455666666666654
Q ss_pred EEeecCCCceEEEEEe
Q 044932 669 RMTYAQDKEGILCAQK 684 (689)
Q Consensus 669 ~~~~~~~~E~iL~~~K 684 (689)
++........++++++
T Consensus 319 ~~~~~~~~~~~i~~~~ 334 (335)
T 2r3s_A 319 QLHSLPTTQQQVIVAY 334 (335)
T ss_dssp EEECCTTSSSEEEEEE
T ss_pred eEEECCCCceeEEEec
Confidence 3333333456777765
No 414
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=95.21 E-value=0.0096 Score=62.27 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=58.9
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCchhh----hhcccc---chhhccccCCCCCCCccchhhcccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTLPV----IYDRGL---VGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL~v----I~~RGL---ig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
..|||+++|.|.++..+...+.- .|+-++....+.. +-..|| |-+.+.=.+.+ ..|..||+|-+..++..
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~--~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~~~~~D~Ivs~~~~~~ 128 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQVDIIISEPMGYM 128 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEEECCCBTT
T ss_pred CEEEEcCCCccHHHHHHHhCCCC--EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhC-CCCCceeEEEEeCchhc
Confidence 47999999999999888765431 2333332212211 222244 22333222223 24678999999888776
Q ss_pred ccCCcCCccceeeeeccccccCcEEEEe
Q 044932 621 LKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 621 ~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
+...-. ...+.++-|+|+|||.+++.
T Consensus 129 ~~~~~~--~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 129 LFNERM--LESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTTSH--HHHHHHGGGGEEEEEEEESC
T ss_pred CChHHH--HHHHHHHHhhcCCCeEEEEe
Confidence 543222 34677899999999999854
No 415
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.16 E-value=0.003 Score=60.74 Aligned_cols=89 Identities=18% Similarity=0.158 Sum_probs=54.4
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----c-cchhhccccCCCCCCCccchhhccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----G-LVGIYHDWCESFGTYPRSYDLLHADHLFSRL 621 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----G-Lig~yhdwce~f~typrTyDLlHa~~lfs~~ 621 (689)
..|+|+++|.|.++..|..... +|+-++- +..+...-.+ | +--+..|..+.++ .+.+||+|.+++++...
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 3799999999999999976532 3433332 2222222222 1 1112223333222 24689999988777532
Q ss_pred cCCcCCccceeeeeccccccCcEEEEeCc
Q 044932 622 KSRCRQPVSIVVEMDRILRPGGWAIVRDK 650 (689)
Q Consensus 622 ~~~c~~~~~illEmDRILRP~G~~iirD~ 650 (689)
.-++-|+|+|||.+++-..
T Consensus 148 ----------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 148 ----------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ----------CHHHHHTEEEEEEEEEEEC
T ss_pred ----------HHHHHHHcCCCcEEEEEEc
Confidence 2367899999999998754
No 416
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.13 E-value=0.014 Score=60.51 Aligned_cols=99 Identities=18% Similarity=0.152 Sum_probs=53.8
Q ss_pred eEEeecCCcchhHHHHhccCC-ceEEEeccCCCCCchhhh--hcccc--chhhccccCCCCCCCccchhhcccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQK-IWVMNVVPVHAPDTLPVI--YDRGL--VGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~-vWVMNvvp~~~~~tL~vI--~~RGL--ig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
..|+|++||.|+|+..|.... |.-+-+.+..++..+-.+ -..|. |-+... ...+..-+.+||+|.++..|+...
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~~g~ 162 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGESSPN 162 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCCCSS
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccccCc
Confidence 579999999999998887762 322222111111111000 00111 111111 122333357899999988775110
Q ss_pred ---CCcCCccceeeeeccccccCcEEEEe
Q 044932 623 ---SRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 623 ---~~c~~~~~illEmDRILRP~G~~iir 648 (689)
+.-.+ ..+|-++-|+|+|||.+++.
T Consensus 163 ~~~d~~~~-l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 163 PTVEAGRT-LRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp HHHHHHHH-HHHHHHHHHHCCTTCEEEEE
T ss_pred chhhHHHH-HHHHHHHHHHhCCCCEEEEE
Confidence 00001 13677889999999999995
No 417
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=95.05 E-value=0.0032 Score=61.65 Aligned_cols=127 Identities=16% Similarity=0.171 Sum_probs=70.1
Q ss_pred eEEeecCCcchhHHHHhccC-C-ceEEEeccCCC-CCchhhh----hccccch---hh-ccccCCCCCCC-----ccchh
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-K-IWVMNVVPVHA-PDTLPVI----YDRGLVG---IY-HDWCESFGTYP-----RSYDL 611 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~-vWVMNvvp~~~-~~tL~vI----~~RGLig---~y-hdwce~f~typ-----rTyDL 611 (689)
++|+|+++|.|.++.+|... + -. .|+-++. +..+.+. -..|+-. +. .|..+.++.+| .+||+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~--~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG--QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 47999999999999888753 1 11 1232322 1222221 1223321 11 12222222222 68999
Q ss_pred hccccccccccCCcCCccceeeeeccccccCcEEEEeCch------------hhHHHHHHHH----hhcceeEEEeecCC
Q 044932 612 LHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV------------EILDPLEGIL----RSLHWEIRMTYAQD 675 (689)
Q Consensus 612 lHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~------------~~l~~v~~i~----~~lrW~~~~~~~~~ 675 (689)
|..+.... . ...++-++-|+|||||++++.+.. .....++.+. ..-++.+.+.. -
T Consensus 152 V~~d~~~~------~-~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp--~ 222 (232)
T 3cbg_A 152 IFIDADKR------N-YPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP--L 222 (232)
T ss_dssp EEECSCGG------G-HHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC--S
T ss_pred EEECCCHH------H-HHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE--c
Confidence 98765422 1 234567778999999999997532 1223334433 34466666542 2
Q ss_pred CceEEEEEec
Q 044932 676 KEGILCAQKT 685 (689)
Q Consensus 676 ~E~iL~~~K~ 685 (689)
.+++.+++|.
T Consensus 223 ~dG~~~~~~~ 232 (232)
T 3cbg_A 223 GDGMTLALKK 232 (232)
T ss_dssp BTCEEEEEEC
T ss_pred CCeEEEEEeC
Confidence 4679998874
No 418
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.04 E-value=0.015 Score=54.15 Aligned_cols=78 Identities=18% Similarity=0.162 Sum_probs=40.0
Q ss_pred ccchhhccccccccccCCc-C------CccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhcceeEEEee-----c
Q 044932 607 RSYDLLHADHLFSRLKSRC-R------QPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWEIRMTY-----A 673 (689)
Q Consensus 607 rTyDLlHa~~lfs~~~~~c-~------~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~~~~~~-----~ 673 (689)
.+||+|-++..+....... + +...+|-++-|+|||||.+++.+- ..-...+...+...--.+.+.. .
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~~ 175 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRK 175 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC----
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccCc
Confidence 5899998876443211100 0 013567889999999999999732 1222333333333212233321 1
Q ss_pred CCCceEEEEEe
Q 044932 674 QDKEGILCAQK 684 (689)
Q Consensus 674 ~~~E~iL~~~K 684 (689)
...|.+|+|..
T Consensus 176 ~~~e~~~v~~g 186 (196)
T 2nyu_A 176 ESSEVYFLATQ 186 (196)
T ss_dssp ----EEEEEEE
T ss_pred cCceEEEEeee
Confidence 23577777764
No 419
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=94.96 E-value=0.0036 Score=59.28 Aligned_cols=88 Identities=17% Similarity=0.135 Sum_probs=53.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----cc--chhh-ccccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----GL--VGIY-HDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----GL--ig~y-hdwce~f~typrTyDLlHa~~lfs 619 (689)
..|+|+++|.|.+++.|..... +|+-++- +..+...-.+ |+ |-+. .|..+.+ .-+.+||+|.+++.+.
T Consensus 79 ~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTAAPP 154 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESSBCS
T ss_pred CEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEccchh
Confidence 4799999999999999876532 2333332 2222222221 32 1122 2333322 2246899999987765
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
... =++-|+|+|||.+++--
T Consensus 155 ~~~----------~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 155 EIP----------TALMTQLDEGGILVLPV 174 (210)
T ss_dssp SCC----------THHHHTEEEEEEEEEEE
T ss_pred hhh----------HHHHHhcccCcEEEEEE
Confidence 432 25678999999999863
No 420
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=94.89 E-value=0.0039 Score=63.51 Aligned_cols=134 Identities=13% Similarity=0.077 Sum_probs=66.6
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCC--CC-Cchhhhhcccc-chhhccccCCCCCCCccchhhcccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVH--AP-DTLPVIYDRGL-VGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~--~~-~tL~vI~~RGL-ig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
..|+|++||.|+|+..|... .|.-+-+-|.. +. +.++ .-..|. |-+.++-+..+..-+.+||+|-++..+....
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~-~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~~~~~~ 154 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRI-TESYGWNIVKFKSRVDIHTLPVERTDVIMCDVGESSPK 154 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCC-CCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSC
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhh-hhccCCCeEEEecccCHhHCCCCCCcEEEEeCcccCCc
Confidence 57999999999998888765 34333343420 00 1000 000010 0011111112112268999998875522100
Q ss_pred ---CCcCCccceeeeeccccccCc--EEEEe----CchhhHHHHHHHHhhcceeEEEee----cCCCceEEEEEe
Q 044932 623 ---SRCRQPVSIVVEMDRILRPGG--WAIVR----DKVEILDPLEGILRSLHWEIRMTY----AQDKEGILCAQK 684 (689)
Q Consensus 623 ---~~c~~~~~illEmDRILRP~G--~~iir----D~~~~l~~v~~i~~~lrW~~~~~~----~~~~E~iL~~~K 684 (689)
+.-..+ .+|-++.|+|+||| .+++. +..+++..++.+...+. .+.+.. ....|.+++|..
T Consensus 155 ~~~d~~~~l-~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 155 WSVESERTI-KILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred cchhHHHHH-HHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 000001 25677899999999 88885 34434444444443322 222221 133577777743
No 421
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=94.89 E-value=0.0048 Score=63.07 Aligned_cols=103 Identities=10% Similarity=-0.001 Sum_probs=63.6
Q ss_pred ccCCCCCCeeEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccccc-hhhccccCCC----CCCCccchhh
Q 044932 539 GLGIDWSKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRGLV-GIYHDWCESF----GTYPRSYDLL 612 (689)
Q Consensus 539 ~l~~~~~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RGLi-g~yhdwce~f----~typrTyDLl 612 (689)
.+.+..+ ..|+|+++|.|.++..|....- .|+-++.. .-|.+.-++--- .+-.+|.+.- ...+.+||+|
T Consensus 40 ~l~l~~g--~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 40 LENIVPG--STVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp TTTCCTT--CEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEE
T ss_pred hcCCCCc--CEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEE
Confidence 3444433 4799999999999999987642 34444432 333332222100 1223333211 1235789999
Q ss_pred ccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 613 HADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 613 Ha~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
-++.+|..+... . +..+|-+|-|+| |||.+++.-
T Consensus 115 v~~~~l~~~~~~-~-~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 115 LNDRLINRFTTE-E-ARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEESCGGGSCHH-H-HHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEhhhhHhCCHH-H-HHHHHHHHHHhC-cCcEEEEEe
Confidence 999888765322 2 245788999999 999999973
No 422
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=94.86 E-value=0.0027 Score=61.62 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=57.8
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhccc---cchh-hccccCCCC---CCC--ccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDRG---LVGI-YHDWCESFG---TYP--RSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~RG---Lig~-yhdwce~f~---typ--rTyDLlHa~~l 617 (689)
..|+|+++|.|.++..|....- +|+-++-. ..+...-.+- =|-+ -.|..+ ++ .|+ ..||+|.+..+
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLV-PEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTC-HHHHHHHHHHHCSCEEEEESS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccc-cccccccccccCccEEEEcch
Confidence 4599999999999999876432 34444432 2332222221 0111 112221 11 111 23899999988
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
|..... -. ...+|-++-|+|+|||+++|-+
T Consensus 134 ~~~~~~-~~-~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIPV-EK-RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSCG-GG-HHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCCH-HH-HHHHHHHHHHHcCCCCEEEEEe
Confidence 876642 22 2568999999999999988775
No 423
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=94.84 E-value=0.0026 Score=64.58 Aligned_cols=45 Identities=20% Similarity=0.281 Sum_probs=34.3
Q ss_pred CCCccchhhcccccccccc---CCcCCccceeeeeccccccCcEEEEeC
Q 044932 604 TYPRSYDLLHADHLFSRLK---SRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 604 typrTyDLlHa~~lfs~~~---~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..+.+||+|.+.+++.... .... +..+|-+|-|+|+|||++||..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl~~~~~~-~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHLNWGDEG-LKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHHHHHHHH-HHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhhcCCHHH-HHHHHHHHHHHhCCCcEEEEec
Confidence 3578999999988874321 2234 3568999999999999999974
No 424
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.79 E-value=0.007 Score=59.60 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=58.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----ccc-----chhhccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGL-----VGIYHDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGL-----ig~yhdwce~f~typrTyDLlHa~~l 617 (689)
..|||+++|.|.+|..|..... -+|+-++. |.-|...-+ .|+ .|-..+....| -..+||.|..+.+
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~FD~i~~D~~ 137 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTL--PDGHFDGILYDTY 137 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGS--CTTCEEEEEECCC
T ss_pred CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccc--cccCCceEEEeee
Confidence 4699999999999999987642 23333332 222322211 121 12222223333 3467999977666
Q ss_pred cccccC--CcCCccceeeeeccccccCcEEEEeC
Q 044932 618 FSRLKS--RCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 618 fs~~~~--~c~~~~~illEmDRILRP~G~~iirD 649 (689)
++.+.. .-. ...++-|+=|+|||||.+++-+
T Consensus 138 ~~~~~~~~~~~-~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTHQ-FNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTHH-HHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhcc-hhhhhhhhhheeCCCCEEEEEe
Confidence 554432 223 3567889999999999998853
No 425
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=94.77 E-value=0.0018 Score=62.20 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=69.1
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc-cc--------------chhhccccCCCCCCC----c
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR-GL--------------VGIYHDWCESFGTYP----R 607 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R-GL--------------ig~yhdwce~f~typ----r 607 (689)
..|||.++|.|.++..|.+... +|+-++-. .-|.....| ++ .+-..=.|-.+..+| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 3699999999999999987653 45555532 333333332 11 000111122222333 6
Q ss_pred cchhhccccccccccCCcCCccceeeeeccccccCcE--EEEeCch----------hhHHHHHHHHhhcceeEEE
Q 044932 608 SYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGW--AIVRDKV----------EILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 608 TyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~--~iirD~~----------~~l~~v~~i~~~lrW~~~~ 670 (689)
+||+|-+.++|.... ... ...++-||-|+|||||. ++.-+-. -..+.++.+... .|++..
T Consensus 101 ~fD~v~~~~~l~~l~-~~~-~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~ 172 (203)
T 1pjz_A 101 HCAAFYDRAAMIALP-ADM-RERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTK 172 (203)
T ss_dssp SEEEEEEESCGGGSC-HHH-HHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEE
T ss_pred CEEEEEECcchhhCC-HHH-HHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEE
Confidence 899999887776543 222 23468899999999997 3332211 135677777776 677643
No 426
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.76 E-value=0.014 Score=57.47 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=56.1
Q ss_pred eEEeecCCcchhHHHHhccC--C-ceEEEeccCCC----CCchhhh----hcccc---chhhc-c-c-cCCCCCCCccch
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--K-IWVMNVVPVHA----PDTLPVI----YDRGL---VGIYH-D-W-CESFGTYPRSYD 610 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~-vWVMNvvp~~~----~~tL~vI----~~RGL---ig~yh-d-w-ce~f~typrTyD 610 (689)
..|+|+++|.|.++..|... + .-|.-|=+... |..+... ...|+ |-+.+ | . .+.++..+.+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 47999999999999988754 2 33322222211 2244332 22233 21222 1 2 123333458999
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+|++.++|....+. ..++-.+.++|+|||+++|.+
T Consensus 125 ~v~~~~~l~~~~~~----~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 125 RVVLAHSLWYFASA----NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEEESCGGGSSCH----HHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEccchhhCCCH----HHHHHHHHHHhCCCCEEEEEE
Confidence 99999998765432 233334455666699999964
No 427
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.74 E-value=0.0047 Score=59.27 Aligned_cols=128 Identities=17% Similarity=0.125 Sum_probs=70.1
Q ss_pred eeEEeecCCcchhHHHHhccC-C-ceEEEeccCCC-CCchhhh----hccccc---hhhc-cccCCCCCCC-----ccch
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-K-IWVMNVVPVHA-PDTLPVI----YDRGLV---GIYH-DWCESFGTYP-----RSYD 610 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~-vWVMNvvp~~~-~~tL~vI----~~RGLi---g~yh-dwce~f~typ-----rTyD 610 (689)
-++|+|+++|.|.++.+|... + -. +|+-++. +..+.+. -..|+- -+.+ |..+.++..+ .+||
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADG--RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTC--EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 358999999999999988763 1 11 2333332 2222221 222431 1111 2222222222 6899
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeCch------------hhHHHHHHH----HhhcceeEEEeecC
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV------------EILDPLEGI----LRSLHWEIRMTYAQ 674 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~------------~~l~~v~~i----~~~lrW~~~~~~~~ 674 (689)
+|.++.. ... ...++-++=|+|||||.+++.+.. .....++.+ ...-++.+.+..
T Consensus 148 ~v~~d~~------~~~-~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp-- 218 (229)
T 2avd_A 148 VAVVDAD------KEN-CSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLP-- 218 (229)
T ss_dssp EEEECSC------STT-HHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEEC--
T ss_pred EEEECCC------HHH-HHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEe--
Confidence 9887654 122 134667777999999999996522 123333333 334456665542
Q ss_pred CCceEEEEEec
Q 044932 675 DKEGILCAQKT 685 (689)
Q Consensus 675 ~~E~iL~~~K~ 685 (689)
-.+++++++|.
T Consensus 219 ~~dGl~~~~k~ 229 (229)
T 2avd_A 219 LGDGLTLAFKI 229 (229)
T ss_dssp STTCEEEEEEC
T ss_pred cCCceEEEEEC
Confidence 24689999874
No 428
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=94.67 E-value=0.0018 Score=59.76 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=58.9
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhh----hhccccc----hhhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGLV----GIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGLi----g~yhdwce~f~typrTyDLlHa~~lf 618 (689)
.+|+|+++|.|.++.+|...+.. +|+-++-. ..+.. +-..|+- =+..|+.+.++..+..||+|.++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMS--AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCC--EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 47999999999999988776532 34444432 22221 1222321 11234444344456789999988776
Q ss_pred ccccCCcCCccceeeee--ccccccCcEEEEeCchh
Q 044932 619 SRLKSRCRQPVSIVVEM--DRILRPGGWAIVRDKVE 652 (689)
Q Consensus 619 s~~~~~c~~~~~illEm--DRILRP~G~~iirD~~~ 652 (689)
.. .. ...++-.+ -|+|+|||.+++.....
T Consensus 111 ~~----~~-~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 111 AK----ET-IVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HH----HH-HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred Cc----ch-HHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 32 11 13344444 49999999999975443
No 429
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=94.66 E-value=0.077 Score=54.61 Aligned_cols=122 Identities=15% Similarity=0.041 Sum_probs=65.4
Q ss_pred cchhHHHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC----CeEEEEcCCcccHHHHHHHHHHcCCCcE-Ee
Q 044932 285 FKGGVLHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK----EVLTLTVGLKDDLVDLAQVALERGFPAV-VS 359 (689)
Q Consensus 285 F~~ga~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~----~V~gmDIsp~D~seamlq~A~eRGL~~i-~~ 359 (689)
|..++..-+..|.+.. .+.. ..+|||+||++|+|+.+.+.. .|.++|+-+....+.++ ....|-..+ +.
T Consensus 59 yrSRa~~KL~ei~ek~-~l~~---g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~--~~s~gwn~v~fk 132 (267)
T 3p8z_A 59 AVSRGSAKLQWFVERN-MVIP---EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP--MSTYGWNIVKLM 132 (267)
T ss_dssp CSSTHHHHHHHHHHTT-SSCC---CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC--CCCTTTTSEEEE
T ss_pred ccchHHHHHHHHHHhc-CCCC---CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch--hhhcCcCceEEE
Confidence 3344433344444433 3443 459999999999999866643 48899987742211110 011232322 22
Q ss_pred cC-CCCCCCCCCCCcceEEeccc---cccccccH--HHHHHHHHhccCCCcEEEEEcCCCch
Q 044932 360 PL-GNRRLPFPSGVFDAIHCDGC---SITWHAHG--GKLLLEMNRILRPSGYFILSTKHDSI 415 (689)
Q Consensus 360 ~~-dt~~LPFpD~SFDlVhcs~c---li~W~~d~--~~aL~EI~RVLRPGG~fVIsdp~~~l 415 (689)
.. |...++ ...||.|+|-.. -.++.+.. ..+|.=+.+.|++ |-|++-.-.++.
T Consensus 133 ~gvDv~~~~--~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 133 SGKDVFYLP--PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CSCCGGGCC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred eccceeecC--CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 22 433332 256999999531 12222111 1244455688998 788887655444
No 430
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.65 E-value=0.0068 Score=59.16 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=45.0
Q ss_pred ccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeCc------------hhhHHHHHHH----HhhcceeEEE
Q 044932 607 RSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK------------VEILDPLEGI----LRSLHWEIRM 670 (689)
Q Consensus 607 rTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~------------~~~l~~v~~i----~~~lrW~~~~ 670 (689)
.+||+|.+++.... ...++-++-|+|||||.+++.+- ......++.+ ...-++.+.+
T Consensus 146 ~~fD~I~~~~~~~~-------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (239)
T 2hnk_A 146 SSIDLFFLDADKEN-------YPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSL 218 (239)
T ss_dssp TCEEEEEECSCGGG-------HHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCcCEEEEeCCHHH-------HHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEE
Confidence 68999977643222 13467778899999999999861 1123333333 3445566665
Q ss_pred eecCCCceEEEEEecc
Q 044932 671 TYAQDKEGILCAQKTM 686 (689)
Q Consensus 671 ~~~~~~E~iL~~~K~~ 686 (689)
.- -..++.+++|++
T Consensus 219 ~p--~~~g~~~~~~~~ 232 (239)
T 2hnk_A 219 VP--IADGVSLVRKRL 232 (239)
T ss_dssp EC--STTCEEEEEECC
T ss_pred EE--cCCceEeeeehh
Confidence 42 236799999875
No 431
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=94.62 E-value=0.015 Score=57.53 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=63.3
Q ss_pred eEEeecCCcchhHHHHhccC-----CceEEEeccCCC-CCchhhhhcccc---ch-hhccccCC--CCCCCc-cchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-----KIWVMNVVPVHA-PDTLPVIYDRGL---VG-IYHDWCES--FGTYPR-SYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-----~vWVMNvvp~~~-~~tL~vI~~RGL---ig-~yhdwce~--f~typr-TyDLlHa 614 (689)
..|+|+++|.|++++.|... +-. .|+-++- +.-+.+. |++ |= +..|..+. ++..+. +||+|+.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~--~V~gvD~s~~~l~~a--~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDC--QVIGIDRDLSRCQIP--ASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCC--EEEEEESCCTTCCCC--GGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCC--EEEEEeCChHHHHHH--hccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 47999999999999988653 211 1333322 1111111 122 11 11233332 222233 6999997
Q ss_pred ccccccccCCcCCccceeeeecc-ccccCcEEEEeCch-----hhHHHHHHHHhhc--ceeEE
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDR-ILRPGGWAIVRDKV-----EILDPLEGILRSL--HWEIR 669 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDR-ILRP~G~~iirD~~-----~~l~~v~~i~~~l--rW~~~ 669 (689)
++.- -. ...+|-++-| +|+|||++++.|.. .--..+..+++.. ++...
T Consensus 159 d~~~------~~-~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 159 DNAH------AN-TFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp ESSC------SS-HHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred CCch------Hh-HHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 6541 14 3567889998 99999999997631 1123566666666 56553
No 432
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=94.51 E-value=0.0076 Score=57.86 Aligned_cols=128 Identities=14% Similarity=0.156 Sum_probs=67.2
Q ss_pred eEEeecCCcchhHHHHhccCCceE--EEeccCCCCCchhhhhccccchhhccccCCCCC-------CC----ccchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWV--MNVVPVHAPDTLPVIYDRGLVGIYHDWCESFGT-------YP----RSYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWV--MNvvp~~~~~tL~vI~~RGLig~yhdwce~f~t-------yp----rTyDLlHa 614 (689)
.+|+|+++|.|+|+..|....--| +-+.|... + .|+.=+-.|..+. .+ ++ .+||+|-+
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~---~-----~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE---I-----AGVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC---C-----TTCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEecccccc---C-----CCeEEEEccccCH-HHHHHHHHHhhcccCCcceEEec
Confidence 579999999999999998764322 22222211 1 1211112232221 11 11 38999988
Q ss_pred ccccccccCC-------cCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcceeEEEee-----cCCCceEEE
Q 044932 615 DHLFSRLKSR-------CRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHWEIRMTY-----AQDKEGILC 681 (689)
Q Consensus 615 ~~lfs~~~~~-------c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW~~~~~~-----~~~~E~iL~ 681 (689)
+.-....... -.+.+.+|-++-|+|||||.+++-- ...-...+..+++..==++.+.. ....|.++|
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v 177 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPPASRGSSSEIYIM 177 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEEEEEECC------CCEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCEEEEECCCCccCCCceEEEE
Confidence 7643211100 0001346777889999999998752 11122344444443312233331 134799999
Q ss_pred EEe
Q 044932 682 AQK 684 (689)
Q Consensus 682 ~~K 684 (689)
|+.
T Consensus 178 ~~~ 180 (191)
T 3dou_A 178 FFG 180 (191)
T ss_dssp EEE
T ss_pred Eee
Confidence 975
No 433
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=94.50 E-value=0.0095 Score=57.75 Aligned_cols=135 Identities=12% Similarity=0.125 Sum_probs=70.3
Q ss_pred cCCCCCCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCC-C----chhhhhcc-ccchhhccccCC--CCCCCccc
Q 044932 540 LGIDWSKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAP-D----TLPVIYDR-GLVGIYHDWCES--FGTYPRSY 609 (689)
Q Consensus 540 l~~~~~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~-~----tL~vI~~R-GLig~yhdwce~--f~typrTy 609 (689)
+.+..+ ..|+|+++|.|+|+..|... +-. .|+-++-. . .+...-.+ ++.-+..|..+. ++..+.+|
T Consensus 73 ~~~~~~--~~vLDlG~G~G~~~~~la~~~g~~~--~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 73 IHIKPG--AKVLYLGAASGTTVSHVSDIVGPDG--LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCCTT--CEEEEECCTTSHHHHHHHHHHCTTC--EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCE
T ss_pred ecCCCC--CEEEEEcccCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcE
Confidence 344433 47999999999999988754 211 12222221 1 11111111 222222333331 23345789
Q ss_pred hhhccccccccccCCcCCccceeeeeccccccCcEEEEeCchh----------hHHHHHHHHhhcceeEEE-ee--cC-C
Q 044932 610 DLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE----------ILDPLEGILRSLHWEIRM-TY--AQ-D 675 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~----------~l~~v~~i~~~lrW~~~~-~~--~~-~ 675 (689)
|+|.++.. .......++.++-|+|+|||.++|.=... ++.+-..++....|...- .. .. .
T Consensus 149 D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 222 (233)
T 2ipx_A 149 DVIFADVA------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYER 222 (233)
T ss_dssp EEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSS
T ss_pred EEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccC
Confidence 99988543 12211234667999999999999953221 132324555666676543 21 11 1
Q ss_pred CceEEEEEe
Q 044932 676 KEGILCAQK 684 (689)
Q Consensus 676 ~E~iL~~~K 684 (689)
.--++++++
T Consensus 223 ~~~~v~~~~ 231 (233)
T 2ipx_A 223 DHAVVVGVY 231 (233)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEEe
Confidence 234666665
No 434
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=94.43 E-value=0.0053 Score=62.03 Aligned_cols=97 Identities=9% Similarity=0.137 Sum_probs=55.3
Q ss_pred EEeecCCcchhHHHHhccC---CceEEEeccCCCC-Cchhh----hhccccchhhccccCCCCCCC-ccchhhccccccc
Q 044932 549 NVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHAP-DTLPV----IYDRGLVGIYHDWCESFGTYP-RSYDLLHADHLFS 619 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~---~vWVMNvvp~~~~-~tL~v----I~~RGLig~yhdwce~f~typ-rTyDLlHa~~lfs 619 (689)
.|+|+++|+|.++.+|... +=+ +|+=++-. .-|.. +-..|+..-..=.|.-+..+| ..||+|-+..+|.
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~--~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNC--KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSC--EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCC--EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 6999999999999888643 211 23333321 22221 112233221111122122222 4599998887776
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.... -. ...+|-+|-|+|+|||.+||.|
T Consensus 151 ~~~~-~~-~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 151 FLEP-SE-RQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GSCH-HH-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecCc-hh-HhHHHHHHHHHcCCCcEEEEEe
Confidence 4422 12 1347889999999999999975
No 435
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=94.35 E-value=0.0025 Score=57.69 Aligned_cols=95 Identities=11% Similarity=0.111 Sum_probs=55.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhh----hcccc-chhh-ccccCCCCCCC---ccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVI----YDRGL-VGIY-HDWCESFGTYP---RSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI----~~RGL-ig~y-hdwce~f~typ---rTyDLlHa~~l 617 (689)
..|+|+++|.|.++.+|.....- |+-++.. ..+... -..|+ +-++ .|+.+.++.++ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 46999999999999988765322 4444432 222211 11232 1111 22222222222 37999999887
Q ss_pred cccccCCcCCccceeeeec--cccccCcEEEEeCch
Q 044932 618 FSRLKSRCRQPVSIVVEMD--RILRPGGWAIVRDKV 651 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmD--RILRP~G~~iirD~~ 651 (689)
|. . . ...++-.+- |+|+|||.+++....
T Consensus 120 ~~--~---~-~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 120 YA--M---D-LAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp TT--S---C-TTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred Cc--h---h-HHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 76 1 1 134455555 999999999997543
No 436
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=94.34 E-value=0.0087 Score=58.74 Aligned_cols=128 Identities=11% Similarity=0.089 Sum_probs=72.3
Q ss_pred EEeecCCcchhHHHHhccC---CceEEEeccCCCC-Cchh----hhhccccc----hhh-ccccCCCCCC-Cccchhhcc
Q 044932 549 NVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHAP-DTLP----VIYDRGLV----GIY-HDWCESFGTY-PRSYDLLHA 614 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~---~vWVMNvvp~~~~-~tL~----vI~~RGLi----g~y-hdwce~f~ty-prTyDLlHa 614 (689)
+|+|+++|.|.++.+|... ..- |+-++.. ..+. .+-..|+- -+. -|..+.++.+ +.+||+|-.
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~---v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTT---LTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSE---EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 7999999999998888652 221 3333321 1221 12222332 111 1222333344 578999976
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeCch------------hhHHHHHHHHhhcceeEEE--eecCCCceEE
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV------------EILDPLEGILRSLHWEIRM--TYAQDKEGIL 680 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~------------~~l~~v~~i~~~lrW~~~~--~~~~~~E~iL 680 (689)
+.-...+ ..++-++-|+|||||++++.|-. .....++.+...+++.-++ .-..-.++++
T Consensus 136 d~~~~~~-------~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~ 208 (221)
T 3dr5_A 136 QVSPMDL-------KALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLT 208 (221)
T ss_dssp CCCTTTH-------HHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEE
T ss_pred cCcHHHH-------HHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHH
Confidence 6432221 33566777999999999997532 1233556666666665222 1123357899
Q ss_pred EEEecc
Q 044932 681 CAQKTM 686 (689)
Q Consensus 681 ~~~K~~ 686 (689)
+++|.+
T Consensus 209 ~~~~~~ 214 (221)
T 3dr5_A 209 VVTKAL 214 (221)
T ss_dssp EEEECC
T ss_pred HHHHHH
Confidence 999875
No 437
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=94.34 E-value=0.01 Score=59.71 Aligned_cols=117 Identities=13% Similarity=0.029 Sum_probs=70.3
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc-cc-------------------chhhccccCCCCCCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR-GL-------------------VGIYHDWCESFGTYP 606 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R-GL-------------------ig~yhdwce~f~typ 606 (689)
..|||.++|.|.++..|.+... +|+-++.. .-+.....+ ++ -+-..=.|-.+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 3699999999999999988764 46655543 222222211 11 000011122222222
Q ss_pred ----ccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeC---------ch---hhHHHHHHHHhhcceeEEE
Q 044932 607 ----RSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD---------KV---EILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 607 ----rTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD---------~~---~~l~~v~~i~~~lrW~~~~ 670 (689)
.+||+|-+.++|.... ... ...++-+|-|+|+|||.++|-. .. -..+.+..++.. .|++..
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~-~~~-~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAIN-PGD-HDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSC-GGG-HHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCC-HHH-HHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 7899999888887653 223 2457889999999999986321 11 134677777765 377644
No 438
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=94.33 E-value=0.0034 Score=60.81 Aligned_cols=93 Identities=16% Similarity=0.231 Sum_probs=57.3
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhhcc----cc---chh-hccccCCCCCC--Cccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIYDR----GL---VGI-YHDWCESFGTY--PRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~~R----GL---ig~-yhdwce~f~ty--prTyDLlHa~ 615 (689)
..|+|+++|.|.++.+|... +- -+|+-++.. ..+...-.+ |+ |-+ ..|..+.++.. +.+||+|-++
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPE--ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 47999999999999888753 11 124444432 333322222 43 211 22333322333 5789999877
Q ss_pred cccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 616 HLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..++ . ...+|-++-|+|+|||.+++.+
T Consensus 134 ~~~~------~-~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AAKG------Q-YRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GGGS------C-HHHHHHHHGGGEEEEEEEEEET
T ss_pred CCHH------H-HHHHHHHHHHHcCCCeEEEEEc
Confidence 6643 2 2457788889999999999975
No 439
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=94.28 E-value=0.0064 Score=63.67 Aligned_cols=96 Identities=15% Similarity=0.181 Sum_probs=60.8
Q ss_pred CCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchhhhhc-cccchhhccccCCCCCCCccchhhccccccccc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLPVIYD-RGLVGIYHDWCESFGTYPRSYDLLHADHLFSRL 621 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~vI~~-RGLig~yhdwce~f~typrTyDLlHa~~lfs~~ 621 (689)
.....|+|+++|.|.++.+|... .+-+. -++-|..+...-. .++--+-+|..++ +|. ||+|.+.++|..+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~---~~D~~~~~~~a~~~~~v~~~~~d~~~~---~~~-~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGI---NFDLPQVIENAPPLSGIEHVGGDMFAS---VPQ-GDAMILKAVCHNW 280 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEE---EEECHHHHTTCCCCTTEEEEECCTTTC---CCC-EEEEEEESSGGGS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEE---EeChHHHHHhhhhcCCCEEEeCCcccC---CCC-CCEEEEecccccC
Confidence 34678999999999999999753 33332 1111111111100 1222223344443 555 9999999999877
Q ss_pred cCCcCCccceeeeeccccccCcEEEEeC
Q 044932 622 KSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 622 ~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+.-. ..+|-++=|+|+|||.++|-|
T Consensus 281 ~d~~~--~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 281 SDEKC--IEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CHHHH--HHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHH--HHHHHHHHHhcCCCCEEEEEE
Confidence 65321 258999999999999999874
No 440
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.24 E-value=0.058 Score=55.17 Aligned_cols=75 Identities=13% Similarity=0.215 Sum_probs=47.4
Q ss_pred CCCCCcceEEecc--c-ccc----------------ccccHHHHHHHHHhccCCCcEEEEEcCCCc-----------hhH
Q 044932 368 FPSGVFDAIHCDG--C-SIT----------------WHAHGGKLLLEMNRILRPSGYFILSTKHDS-----------IEE 417 (689)
Q Consensus 368 FpD~SFDlVhcs~--c-li~----------------W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~-----------le~ 417 (689)
+++++||+|++.- . ... |......++.++.|+|||||.+++...... +..
T Consensus 36 l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~~~~~~g~~~~~~~ 115 (297)
T 2zig_A 36 FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAVARRRFGRHLVFPL 115 (297)
T ss_dssp SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEECC----EEEECH
T ss_pred CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCccccccCCccccccc
Confidence 5678999998852 1 000 111224578899999999999988754211 111
Q ss_pred HHHHHHHHHhcceeEEEeeccccCceeEEEEEeCC
Q 044932 418 EEALTTLTASICWNILAHKTDEISEMGVKIYQKPE 452 (689)
Q Consensus 418 ~~~ie~La~~l~W~~v~~~~~~~g~~~i~IwqKp~ 452 (689)
...+..+++..+|.... ..||.|+.
T Consensus 116 ~~~l~~~~~~~Gf~~~~----------~iiW~K~~ 140 (297)
T 2zig_A 116 HADIQVRCRKLGFDNLN----------PIIWHKHT 140 (297)
T ss_dssp HHHHHHHHHHTTCEEEE----------EEEEECC-
T ss_pred HHHHHHHHHHcCCeeec----------cEEEeCCC
Confidence 23466778888987653 36899974
No 441
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=94.22 E-value=0.016 Score=59.72 Aligned_cols=99 Identities=12% Similarity=0.123 Sum_probs=57.6
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhcc----ccc------h-hh-cccc------CCCC--CCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYDR----GLV------G-IY-HDWC------ESFG--TYP 606 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~R----GLi------g-~y-hdwc------e~f~--typ 606 (689)
..|||+++|.|+.++.+.....+ +|+=++.. .-|.+.-.| |+- . .| +..+ +.++ ..+
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 56999999999987776655543 35555543 333322222 210 0 01 1112 2221 235
Q ss_pred ccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 607 RSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 607 rTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+||+|-+..+|-..-+.-. ...+|-+|-|+|+|||++|+..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~-~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRH-YATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTT-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHH-HHHHHHHHHHHcCCCCEEEEEe
Confidence 89999987655432111113 2567999999999999999874
No 442
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=94.17 E-value=0.0045 Score=59.43 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=50.9
Q ss_pred eEEeecCCcchhHHHHhccC--C-ceEEEeccCCC-CCchhhhh----cccc-------ch-hhccccCCCCCCCccchh
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--K-IWVMNVVPVHA-PDTLPVIY----DRGL-------VG-IYHDWCESFGTYPRSYDL 611 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~-vWVMNvvp~~~-~~tL~vI~----~RGL-------ig-~yhdwce~f~typrTyDL 611 (689)
..|+|+++|.|++++.|... + . +|+-++- +..+...- ..|+ |- +..|..+.+ .-+.+||+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~ 154 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTG---KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-AEEAPYDA 154 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-GGGCCEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCc---EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-ccCCCcCE
Confidence 47999999999999988642 1 1 2333322 12222211 1111 11 122333222 22468999
Q ss_pred hccccccccccCCcCCccceeeeeccccccCcEEEEe
Q 044932 612 LHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 612 lHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
|+++..+. .++-++-|+|+|||.+++-
T Consensus 155 i~~~~~~~----------~~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 155 IHVGAAAP----------VVPQALIDQLKPGGRLILP 181 (226)
T ss_dssp EEECSBBS----------SCCHHHHHTEEEEEEEEEE
T ss_pred EEECCchH----------HHHHHHHHhcCCCcEEEEE
Confidence 99877652 3456778999999999986
No 443
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.12 E-value=0.013 Score=57.69 Aligned_cols=114 Identities=15% Similarity=0.160 Sum_probs=62.1
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhhcc------------ccchh---hccccCCCC--CCCcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIYDR------------GLVGI---YHDWCESFG--TYPRS 608 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~~R------------GLig~---yhdwce~f~--typrT 608 (689)
..|+|+++|.|+|+.+|... +- .+|+-++-. .-+...-.+ |+-.+ -.|..+.++ .-+.+
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE--DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT--SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC--CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 57999999999999888653 21 134444422 222222111 43221 122222222 12456
Q ss_pred chhhccccccc-cc------cCCcCCccceeeeeccccccCcEEEEe-CchhhHHHHHHHHhhcce
Q 044932 609 YDLLHADHLFS-RL------KSRCRQPVSIVVEMDRILRPGGWAIVR-DKVEILDPLEGILRSLHW 666 (689)
Q Consensus 609 yDLlHa~~lfs-~~------~~~c~~~~~illEmDRILRP~G~~iir-D~~~~l~~v~~i~~~lrW 666 (689)
+|.|... |. .+ +.+-. ...+|-++-|+|+|||.+++. |..++.+.+...+....+
T Consensus 129 ~d~v~~~--~p~p~~k~~~~~~r~~-~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFFC--FPDPHFKQRKHKARII-TNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEEE--SCCCC------CSSCC-CHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCEEEEE--CCCcccccchhHHhhc-cHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 6766422 22 11 11111 146888999999999998885 766677767666544433
No 444
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=94.09 E-value=0.028 Score=57.37 Aligned_cols=128 Identities=12% Similarity=0.176 Sum_probs=78.2
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhh----hcccc---chh-hccccCCCCCCCccc---hhhcccc
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVI----YDRGL---VGI-YHDWCESFGTYPRSY---DLLHADH 616 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI----~~RGL---ig~-yhdwce~f~typrTy---DLlHa~~ 616 (689)
.|+|+++|.|.++.+|...+-+ +|+-++- +..|.+. -..|+ |-+ ..||.+.+ +.+| |+|-++-
T Consensus 126 ~vLDlG~GsG~~~~~la~~~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---~~~f~~~D~IvsnP 200 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKFSDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---KEKFASIEMILSNP 200 (284)
T ss_dssp EEEEESCTTSHHHHHHHHHSSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---GGGTTTCCEEEECC
T ss_pred EEEEEeCchhHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---ccccCCCCEEEEcC
Confidence 6999999999999998765333 2443333 2233222 12244 222 23555543 4678 9998762
Q ss_pred cccccc----------------CCcCCccceeeeec-cccccCcEEEEeCchhhHHHHHHHHhhcceeEEEeecCCCceE
Q 044932 617 LFSRLK----------------SRCRQPVSIVVEMD-RILRPGGWAIVRDKVEILDPLEGILRSLHWEIRMTYAQDKEGI 679 (689)
Q Consensus 617 lfs~~~----------------~~c~~~~~illEmD-RILRP~G~~iirD~~~~l~~v~~i~~~lrW~~~~~~~~~~E~i 679 (689)
-+.... ..++- ..++-++= +.|+|||++++-=..+--..|..++... ....|..+.+++
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dg-l~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~g~~R~ 276 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDG-LDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSAGKYRF 276 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTS-CHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTTSSEEE
T ss_pred CCCCcccccChhhccCcHHHhcCCCcH-HHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccCCCceE
Confidence 222111 11221 24566777 8999999999986666666777777665 333456678899
Q ss_pred EEEEec
Q 044932 680 LCAQKT 685 (689)
Q Consensus 680 L~~~K~ 685 (689)
+++.++
T Consensus 277 ~~~~~k 282 (284)
T 1nv8_A 277 LLLNRR 282 (284)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 988875
No 445
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=93.98 E-value=0.034 Score=55.60 Aligned_cols=118 Identities=8% Similarity=0.017 Sum_probs=67.4
Q ss_pred eeEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhh----hhc---ccc---chhhccccCCC-C------CCCc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPV----IYD---RGL---VGIYHDWCESF-G------TYPR 607 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~v----I~~---RGL---ig~yhdwce~f-~------typr 607 (689)
-.+|+|+++|.|.++..|... +- .+|+-++-. ..+.. +.. .|+ |-+++.=...+ + .-+.
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 357999999999998877654 21 123333321 11111 111 233 22232222222 1 1257
Q ss_pred cchhhccccccccc---------------cCCcCCccceeeeeccccccCcEEEEeCchhhHHHHHHHHhhcceeE
Q 044932 608 SYDLLHADHLFSRL---------------KSRCRQPVSIVVEMDRILRPGGWAIVRDKVEILDPLEGILRSLHWEI 668 (689)
Q Consensus 608 TyDLlHa~~lfs~~---------------~~~c~~~~~illEmDRILRP~G~~iirD~~~~l~~v~~i~~~lrW~~ 668 (689)
+||+|-++--|... ...+. +..++-++-|+|+|||.+++--..+-+..+..+++.. |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGL-FEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CC-HHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCC-HHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 89999998444321 22344 3677888999999999998876666677777777663 653
No 446
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=93.91 E-value=0.012 Score=58.02 Aligned_cols=129 Identities=12% Similarity=0.124 Sum_probs=70.8
Q ss_pred eeEEeecCCcchhHHHHhccC-C-ceEEEeccCCC-CCchhh----hhccccch---hh-ccccCCCCCC------Cccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-K-IWVMNVVPVHA-PDTLPV----IYDRGLVG---IY-HDWCESFGTY------PRSY 609 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~-vWVMNvvp~~~-~~tL~v----I~~RGLig---~y-hdwce~f~ty------prTy 609 (689)
-++|+|+++|.|+++.+|... + -. .|+-++- +..+.+ +-..|+-. +. .|..+.++.+ +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~--~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDG--KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTC--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 468999999999998887642 1 11 2333332 122221 22234421 11 1333333333 5789
Q ss_pred hhhccccccccccCCcCCccceeeeeccccccCcEEEEeCch-----------------hhHHHHHHHHhh----cceeE
Q 044932 610 DLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-----------------EILDPLEGILRS----LHWEI 668 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~-----------------~~l~~v~~i~~~----lrW~~ 668 (689)
|+|-.++--. . ...++-++-|+|||||.+++.+.. .+...++.+.+. =++.+
T Consensus 149 D~I~~d~~~~------~-~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~ 221 (237)
T 3c3y_A 149 DFGFVDADKP------N-YIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEI 221 (237)
T ss_dssp EEEEECSCGG------G-HHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEE
T ss_pred CEEEECCchH------H-HHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9998764322 1 234566677999999999998621 012334344433 34444
Q ss_pred EEeecCCCceEEEEEecc
Q 044932 669 RMTYAQDKEGILCAQKTM 686 (689)
Q Consensus 669 ~~~~~~~~E~iL~~~K~~ 686 (689)
.+. ....++++++|.+
T Consensus 222 ~~l--p~~dG~~~~~~~~ 237 (237)
T 3c3y_A 222 VHL--PLGDGITFCRRLY 237 (237)
T ss_dssp EEE--CSTTCEEEEEECC
T ss_pred EEE--EeCCceEEEEEcC
Confidence 443 2246899999864
No 447
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=93.91 E-value=0.032 Score=55.34 Aligned_cols=113 Identities=15% Similarity=0.154 Sum_probs=63.0
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhh----------cccc--chhh-ccccCCCC--CCCccch
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIY----------DRGL--VGIY-HDWCESFG--TYPRSYD 610 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~----------~RGL--ig~y-hdwce~f~--typrTyD 610 (689)
..|+|+++|.|.|+.+|... +-+ ||+=++-. .-|...- ..|+ |-+. .|.-+.++ ..+.++|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~--~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDT--LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTS--EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 46999999999999999754 322 34433322 1111110 0122 1111 12222222 2367899
Q ss_pred hhccccccccc------cCCcCCccceeeeeccccccCcEEEEe-CchhhHHHHHHHHhhc
Q 044932 611 LLHADHLFSRL------KSRCRQPVSIVVEMDRILRPGGWAIVR-DKVEILDPLEGILRSL 664 (689)
Q Consensus 611 LlHa~~lfs~~------~~~c~~~~~illEmDRILRP~G~~iir-D~~~~l~~v~~i~~~l 664 (689)
+|..... ..| +.|.. ...+|-++-|+|+|||.++|. |..++...+...+...
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~-~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRII-SPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEH 184 (235)
T ss_dssp EEEEESC-C-----------CC-CHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred EEEEeCC-Cchhhhhhhhhhhh-hHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 8864321 112 22333 256888999999999999886 7777777666666443
No 448
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=93.88 E-value=0.014 Score=57.54 Aligned_cols=87 Identities=20% Similarity=0.254 Sum_probs=53.0
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhcccc-chhh-ccccCCCCCCCccchhhcccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYDRGL-VGIY-HDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~RGL-ig~y-hdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
..|+|+++|.|.++..|... .. +|+-++- +.-+...-.++- +-+. .|. +.++.-+.+||+|.+.+.
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESC-----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCC-----
Confidence 46999999999999988765 22 2333332 233333333320 1111 122 234444578999987533
Q ss_pred CCcCCccceeeeeccccccCcEEEEeC
Q 044932 623 SRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 623 ~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
...|-|+-|+|||||.+++-+
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEE
T ss_pred ------hhhHHHHHHhcCCCcEEEEEE
Confidence 125789999999999998874
No 449
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=93.85 E-value=0.0091 Score=62.12 Aligned_cols=129 Identities=15% Similarity=0.127 Sum_probs=71.7
Q ss_pred EEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhh----hhccccchhhccccCCCCCCCccchhhcccccccccc
Q 044932 549 NVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPV----IYDRGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~v----I~~RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
.|+|+++|.|.++.+|... +-+ +|+-++.. .-+.. +...|+-..+ -+...++..+.+||+|-++..|....
T Consensus 199 ~VLDlGcG~G~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~g~ 275 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSPKI--RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHDGM 275 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCTTC--BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCSSS
T ss_pred eEEEecCccCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCcccCc
Confidence 6999999999999888653 211 12222221 11211 1122332212 13344444578999999998886321
Q ss_pred --CCcCCccceeeeeccccccCcEEEEeCch--hhHHHHHHHHhhcceeEEEeecCCCceEEEEEec
Q 044932 623 --SRCRQPVSIVVEMDRILRPGGWAIVRDKV--EILDPLEGILRSLHWEIRMTYAQDKEGILCAQKT 685 (689)
Q Consensus 623 --~~c~~~~~illEmDRILRP~G~~iirD~~--~~l~~v~~i~~~lrW~~~~~~~~~~E~iL~~~K~ 685 (689)
..-. ...+|-++-|+|+|||.++|-... ..-..++.+.. ++.......+=+|+.++|.
T Consensus 276 ~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~----~~~~~~~~~gf~v~~~~k~ 337 (343)
T 2pjd_A 276 QTSLDA-AQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFG----FHEVIAQTGRFKVYRAIMT 337 (343)
T ss_dssp HHHHHH-HHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHS----CCEEEEECSSEEEEEEEC-
T ss_pred cCCHHH-HHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcC----ceEEEeeCCCEEEEEEEeC
Confidence 1112 256799999999999999986432 22233333333 2233323344567777663
No 450
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=93.82 E-value=0.0075 Score=60.02 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=43.2
Q ss_pred Cccchhhcccccccccc-CCcCCccceeeeeccccccCcEEEEeCchh----------------hHHHHHHHHhhcceeE
Q 044932 606 PRSYDLLHADHLFSRLK-SRCRQPVSIVVEMDRILRPGGWAIVRDKVE----------------ILDPLEGILRSLHWEI 668 (689)
Q Consensus 606 prTyDLlHa~~lfs~~~-~~c~~~~~illEmDRILRP~G~~iirD~~~----------------~l~~v~~i~~~lrW~~ 668 (689)
..+||+|-+..+|.... +.-+ +..+|-+|-|+|+|||.+++.+... -.+.+..++..-...+
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~~~-~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSLDA-YRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSHHH-HHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred cCCCCEeeehHHHHHhcCCHHH-HHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 35899999999987642 2233 2457889999999999999995211 2456666665555544
No 451
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=93.76 E-value=0.009 Score=58.53 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=64.0
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCCC-Cchh----hhhccccchh---hccccCCCC--CCCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAP-DTLP----VIYDRGLVGI---YHDWCESFG--TYPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~-~tL~----vI~~RGLig~---yhdwce~f~--typrTyDLlHa~ 615 (689)
..|+|+++|.|.++.+|... .. +|+-++-. .-+. -+-..|+-.+ -.|-.+-++ .-+.++|+|++.
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 46999999999999998743 22 24433322 2222 1223344221 122222222 236799998865
Q ss_pred cccccccCCcC----CccceeeeeccccccCcEEEEe-CchhhHHHHHHHHhh
Q 044932 616 HLFSRLKSRCR----QPVSIVVEMDRILRPGGWAIVR-DKVEILDPLEGILRS 663 (689)
Q Consensus 616 ~lfs~~~~~c~----~~~~illEmDRILRP~G~~iir-D~~~~l~~v~~i~~~ 663 (689)
....-.+.+.. +...+|-++-|+|+|||.++|. |...+...+..++..
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 32221111111 0124788999999999999887 556666666666543
No 452
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=93.65 E-value=0.017 Score=58.31 Aligned_cols=109 Identities=15% Similarity=0.054 Sum_probs=61.7
Q ss_pred eEEeecCCcchhHHHHhccC----CceEEEeccCCCCCchhh----hhcccc--chhhccccCCCCCCCccchhhccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ----KIWVMNVVPVHAPDTLPV----IYDRGL--VGIYHDWCESFGTYPRSYDLLHADHL 617 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~----~vWVMNvvp~~~~~tL~v----I~~RGL--ig~yhdwce~f~typrTyDLlHa~~l 617 (689)
..|+|+.+|.|+|+..|... .|+-+-..| ..+.. +-..|+ +-+++.=.+.++ .+.+||+|-++..
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~~~~~D~Vi~d~p 195 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRDVE-LKDVADRVIMGYV 195 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGGCC-CTTCEEEEEECCC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHHcC-ccCCceEEEECCc
Confidence 47999999999999888653 233222222 11111 111122 112221122232 2678999876654
Q ss_pred cccccCCcCCccceeeeeccccccCcEEEEeCchh------hHHH-HHHHHhhcceeEE
Q 044932 618 FSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE------ILDP-LEGILRSLHWEIR 669 (689)
Q Consensus 618 fs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~------~l~~-v~~i~~~lrW~~~ 669 (689)
. . ...+|.++=|+|+|||.+++.+... .+.+ ++.+...+.+++.
T Consensus 196 ~-------~-~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 196 H-------K-THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp S-------S-GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred c-------c-HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 3 3 2557888889999999999986532 4444 4444454555544
No 453
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=93.64 E-value=0.02 Score=56.37 Aligned_cols=97 Identities=13% Similarity=0.043 Sum_probs=50.9
Q ss_pred eEEeecCCcchhHHHHhcc-CCceEEEeccCCCC-Cch-hh-------hhccccchh--hccccCCCCC-CCccchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQ-QKIWVMNVVPVHAP-DTL-PV-------IYDRGLVGI--YHDWCESFGT-YPRSYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~-~~vWVMNvvp~~~~-~tL-~v-------I~~RGLig~--yhdwce~f~t-yprTyDLlHa 614 (689)
..|+|+++|.|.|+.+|.. .+-. +|+=++.. ..+ .+ +..+|+-.+ .+.=.+.++. +.-.+|.++.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~--~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNT--FYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTE--EEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCC--EEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 5699999999999999973 2322 34444432 222 11 123454222 1211233321 1134444444
Q ss_pred ccccccc--cCCcCCccceeeeeccccccCcEEEE
Q 044932 615 DHLFSRL--KSRCRQPVSIVVEMDRILRPGGWAIV 647 (689)
Q Consensus 615 ~~lfs~~--~~~c~~~~~illEmDRILRP~G~~ii 647 (689)
...+... ..+-. ...+|-||-|+|||||.++|
T Consensus 104 ~~~~~~~~~~~~~~-~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 104 LFPWGTLLEYVIKP-NRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ESCCHHHHHHHHTT-CHHHHHHHHTTEEEEEEEEE
T ss_pred eCCCcHHhhhhhcc-hHHHHHHHHHhcCCCcEEEE
Confidence 3221110 00112 13578899999999999999
No 454
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=93.63 E-value=0.0075 Score=57.98 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=54.3
Q ss_pred cccCCCCCCeeEEeecCCcchhHHHHhccC-----CceEEEeccCCCCCchhhhhcc-ccchhhccccC--CCCCCCccc
Q 044932 538 TGLGIDWSKIRNVMDMKSIYGGFAAALAQQ-----KIWVMNVVPVHAPDTLPVIYDR-GLVGIYHDWCE--SFGTYPRSY 609 (689)
Q Consensus 538 ~~l~~~~~~iRNvmDMna~~GgFAAal~~~-----~vWVMNvvp~~~~~tL~vI~~R-GLig~yhdwce--~f~typrTy 609 (689)
..+.+..+ ..|+|+++|.|.++..|... .|..+-+.|.........+-.+ ++.-+..|..+ .+...+.+|
T Consensus 67 ~~~~~~~~--~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 67 KNFPIKPG--KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCCCCCTT--CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCE
T ss_pred HhcCCCCC--CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCc
Confidence 33344444 37999999999999888643 2333322221000000000011 11112223333 112345689
Q ss_pred hhhccccccccccCCcCCccceeeeeccccccCcEEEEe
Q 044932 610 DLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
|+|-++.. ..-. ...+|-++-|+|+|||++++-
T Consensus 145 D~v~~~~~-----~~~~-~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 145 DVIFEDVA-----QPTQ-AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEECCC-----STTH-HHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCC-----CHhH-HHHHHHHHHHhcCCCCEEEEE
Confidence 99986543 1111 123488999999999999884
No 455
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=93.62 E-value=0.11 Score=53.46 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=70.8
Q ss_pred CeeEEeecCCcchhHHHHhccC-CceEEEeccCCCCCchhhhh-----------ccccchh-hccccCCCCCCCccchhh
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAPDTLPVIY-----------DRGLVGI-YHDWCESFGTYPRSYDLL 612 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~~tL~vI~-----------~RGLig~-yhdwce~f~typrTyDLl 612 (689)
.-++|+|+++|.|+++..|... ++.-+-+|=.+. .-+.+.- +..=+-+ .-|.-+.+...+.+||+|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~-~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDA-GVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCT-THHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCH-HHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 3578999999999999988775 343222333222 1211111 1000111 223333344457899999
Q ss_pred ccccccccccC-CcCCccceeeeeccccccCcEEEEeC-----chhhHHHHHHHHhhcceeEEEee------cCCCceEE
Q 044932 613 HADHLFSRLKS-RCRQPVSIVVEMDRILRPGGWAIVRD-----KVEILDPLEGILRSLHWEIRMTY------AQDKEGIL 680 (689)
Q Consensus 613 Ha~~lfs~~~~-~c~~~~~illEmDRILRP~G~~iirD-----~~~~l~~v~~i~~~lrW~~~~~~------~~~~E~iL 680 (689)
-++........ ..- ...++-++-|+|+|||.+++.- ..+.+..+...++..--.+.... ..+.-.++
T Consensus 162 i~D~~~p~~~~~~l~-~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 240 (294)
T 3adn_A 162 ISDCTDPIGPGESLF-TSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EECC----------C-CHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEE
T ss_pred EECCCCccCcchhcc-HHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEE
Confidence 88643221111 111 1446778899999999999963 22334444444433323333321 11223678
Q ss_pred EEEecc
Q 044932 681 CAQKTM 686 (689)
Q Consensus 681 ~~~K~~ 686 (689)
+|.|.+
T Consensus 241 ~as~~~ 246 (294)
T 3adn_A 241 WATDND 246 (294)
T ss_dssp EEESCT
T ss_pred EEeCCc
Confidence 888764
No 456
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.61 E-value=0.005 Score=64.48 Aligned_cols=142 Identities=11% Similarity=0.024 Sum_probs=75.2
Q ss_pred HHHHHHHhhhcccCCCCCCeeEEeecCCcchhHHHHhcc--CCceEEEeccCCC-CCchhh----hhccccchhhccccC
Q 044932 528 WKAIVDRSYLTGLGIDWSKIRNVMDMKSIYGGFAAALAQ--QKIWVMNVVPVHA-PDTLPV----IYDRGLVGIYHDWCE 600 (689)
Q Consensus 528 W~~~v~~~y~~~l~~~~~~iRNvmDMna~~GgFAAal~~--~~vWVMNvvp~~~-~~tL~v----I~~RGLig~yhdwce 600 (689)
|...+..-+ ..+++..+ ..|+|+++|.|+++|.+.. ... .|+-++- +.-|.. +...|+ .-..-.|.
T Consensus 107 ~~~l~~~E~-~la~l~~g--~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~g 179 (298)
T 3fpf_A 107 YLELLKNEA-ALGRFRRG--ERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITG 179 (298)
T ss_dssp HHHHHHHHH-HHTTCCTT--CEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEES
T ss_pred HHHHHHHHH-HHcCCCCc--CEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEEC
Confidence 555554322 13455544 5799999999999876532 222 2333332 122221 222354 21111121
Q ss_pred CCCCC-CccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeCchhhHH----HH-HHHHhhcceeEEEeec-
Q 044932 601 SFGTY-PRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVEILD----PL-EGILRSLHWEIRMTYA- 673 (689)
Q Consensus 601 ~f~ty-prTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~~l~----~v-~~i~~~lrW~~~~~~~- 673 (689)
-+..+ +.+||+|...++. -+ ...++-||=|+|||||.+++++...+-. .+ ..+.. .|+.....+
T Consensus 180 Da~~l~d~~FDvV~~~a~~------~d-~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p 250 (298)
T 3fpf_A 180 DETVIDGLEFDVLMVAALA------EP-KRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLP 250 (298)
T ss_dssp CGGGGGGCCCSEEEECTTC------SC-HHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECC
T ss_pred chhhCCCCCcCEEEECCCc------cC-HHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECC
Confidence 11112 5899999865541 22 3568999999999999999997432110 00 11233 455544322
Q ss_pred -C-CCceEEEEEec
Q 044932 674 -Q-DKEGILCAQKT 685 (689)
Q Consensus 674 -~-~~E~iL~~~K~ 685 (689)
. ....|.+++|.
T Consensus 251 ~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 251 SGKVNNTSVLVFKC 264 (298)
T ss_dssp CTTCCCEEEEEEEC
T ss_pred CCCcCcEEEEEEcc
Confidence 2 24568888874
No 457
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=93.60 E-value=0.007 Score=58.85 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=54.2
Q ss_pred cCCCCCCeeEEeecCCcchhHHHHhccC--CceEEEeccCCCC-Cc----hhhhhcc-ccchhhccccCC--CCCCCccc
Q 044932 540 LGIDWSKIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAP-DT----LPVIYDR-GLVGIYHDWCES--FGTYPRSY 609 (689)
Q Consensus 540 l~~~~~~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~-~t----L~vI~~R-GLig~yhdwce~--f~typrTy 609 (689)
+.+..+ ..|||+++|.|.++..|... .-- |+-++-. .- +...-.+ ++.-+..|..+. +..++.+|
T Consensus 53 ~~~~~g--~~VLDlGcGtG~~~~~la~~~~~~~---V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~f 127 (210)
T 1nt2_A 53 LKLRGD--ERVLYLGAASGTTVSHLADIVDEGI---IYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKV 127 (210)
T ss_dssp CCCCSS--CEEEEETCTTSHHHHHHHHHTTTSE---EEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCE
T ss_pred cCCCCC--CEEEEECCcCCHHHHHHHHHcCCCE---EEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccce
Confidence 344444 36999999999998877642 111 3333322 11 1111111 122222343332 12346899
Q ss_pred hhhccccccccccCCcCCccceeeeeccccccCcEEEEe
Q 044932 610 DLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iir 648 (689)
|+|-++. ... .....+|-|+-|+|+|||.++|-
T Consensus 128 D~V~~~~-----~~~-~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 128 DLIYQDI-----AQK-NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEEECC-----CST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEec-----cCh-hHHHHHHHHHHHHhCCCCEEEEE
Confidence 9998762 111 11123478999999999999986
No 458
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.45 E-value=0.12 Score=53.85 Aligned_cols=66 Identities=14% Similarity=0.186 Sum_probs=42.1
Q ss_pred CCCCCcceEEecc--ccc-----------cccccHHHHHHHHHhccCCCcEEEEEcCCCc--------hhHHHHHHHHHH
Q 044932 368 FPSGVFDAIHCDG--CSI-----------TWHAHGGKLLLEMNRILRPSGYFILSTKHDS--------IEEEEALTTLTA 426 (689)
Q Consensus 368 FpD~SFDlVhcs~--cli-----------~W~~d~~~aL~EI~RVLRPGG~fVIsdp~~~--------le~~~~ie~La~ 426 (689)
+++++||+|++.- ... .|.......|.++.|+|+|||.+++...... ......+..+++
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~ 108 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMID 108 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHH
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHH
Confidence 4578999998751 110 1222356789999999999999999754321 112233445667
Q ss_pred hcceeEE
Q 044932 427 SICWNIL 433 (689)
Q Consensus 427 ~l~W~~v 433 (689)
..+|...
T Consensus 109 ~~Gf~~~ 115 (323)
T 1boo_A 109 EVGFFLA 115 (323)
T ss_dssp TTCCEEE
T ss_pred hCCCEEE
Confidence 7888654
No 459
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=93.40 E-value=0.011 Score=61.44 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=60.3
Q ss_pred CeeEEeecCCcchhHHHHhccC--C--ceEEEeccCCCCCchhhhhc-cccchhhccccCCCCCCCccchhhcccccccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQ--K--IWVMNVVPVHAPDTLPVIYD-RGLVGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~--~--vWVMNvvp~~~~~tL~vI~~-RGLig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
....|+|+++|.|.++.+|... . +.+.-. | ..+...-. .++-=+-+|..+ .+|. ||+|.+.++|..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~---~~p~-~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFT---SIPN-ADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTT---CCCC-CSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccC---CCCC-ccEEEeehhhcc
Confidence 4578999999999999999753 2 333332 2 11111100 122222344444 3454 999999999988
Q ss_pred ccCC-cCCccceeeeecccccc---CcEEEEeC
Q 044932 621 LKSR-CRQPVSIVVEMDRILRP---GGWAIVRD 649 (689)
Q Consensus 621 ~~~~-c~~~~~illEmDRILRP---~G~~iirD 649 (689)
+.+. |. .+|-++=|+|+| ||.++|-|
T Consensus 259 ~~d~~~~---~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 259 WTDKDCL---RILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCHHHHH---HHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CCHHHHH---HHHHHHHHhCCCCCCCcEEEEEE
Confidence 8653 33 589999999999 99998875
No 460
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=93.35 E-value=0.05 Score=55.25 Aligned_cols=134 Identities=16% Similarity=0.103 Sum_probs=70.9
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc-----cc-----------chhhc-cccCCCCCCCccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR-----GL-----------VGIYH-DWCESFGTYPRSY 609 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R-----GL-----------ig~yh-dwce~f~typrTy 609 (689)
++|+|+++|.|+++..|...++ .+|+-++- +.-+.+.-++ || |-+.+ |-.+-+.. +.+|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 6899999999999999987653 12332222 1111111100 21 11111 11111122 6789
Q ss_pred hhhccccccccccCCcCC-ccceeeeeccccccCcEEEEeC-----chhhHHHHHHHHhhcceeEEEeec-----CCCce
Q 044932 610 DLLHADHLFSRLKSRCRQ-PVSIVVEMDRILRPGGWAIVRD-----KVEILDPLEGILRSLHWEIRMTYA-----QDKEG 678 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~-~~~illEmDRILRP~G~~iirD-----~~~~l~~v~~i~~~lrW~~~~~~~-----~~~E~ 678 (689)
|+|-++... .+...-.+ ...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+..... .+.-.
T Consensus 154 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~ 232 (281)
T 1mjf_A 154 DVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWA 232 (281)
T ss_dssp EEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEE
T ss_pred eEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEE
Confidence 999986543 22111010 1346778899999999999972 234455555544444334443211 23456
Q ss_pred EEEEEec
Q 044932 679 ILCAQKT 685 (689)
Q Consensus 679 iL~~~K~ 685 (689)
+++|.|.
T Consensus 233 ~~~as~~ 239 (281)
T 1mjf_A 233 FLVGVKG 239 (281)
T ss_dssp EEEEEES
T ss_pred EEEeeCC
Confidence 8888886
No 461
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=93.31 E-value=0.034 Score=72.36 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=41.1
Q ss_pred CCeEEEECCccchhHHHhh----c-----CCeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCC-CCCCCCcceEEe
Q 044932 309 IRVVLEIGSADLSFVASLL----A-----KEVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRL-PFPSGVFDAIHC 378 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La----~-----~~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~L-PFpD~SFDlVhc 378 (689)
..+||+||.|+|..+..++ . ...+..|+++.....+.-.+.. +......++.... +|...+||+|++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---~di~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---LHVTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---HTEEEECCCSSCCCC-----CCEEEE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---cccccccccccccccCCCCceeEEEE
Confidence 4589999999997654322 1 1345567776433211111111 1222222333222 456678999998
Q ss_pred ccccccccccHHHHHHHHHhccCCCcEEEEEcC
Q 044932 379 DGCSITWHAHGGKLLLEMNRILRPSGYFILSTK 411 (689)
Q Consensus 379 s~cli~W~~d~~~aL~EI~RVLRPGG~fVIsdp 411 (689)
+.++ |-..+....|..++++|||||++++...
T Consensus 1318 ~~vl-~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1318 NCAL-ATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ECC---------------------CCEEEEEEC
T ss_pred cccc-cccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 7544 4355777899999999999999998753
No 462
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=93.28 E-value=0.011 Score=56.14 Aligned_cols=89 Identities=19% Similarity=0.160 Sum_probs=51.6
Q ss_pred eEEeecCCcchhHHHHhccCC---ceEEEeccCCC-CCchhhhhcc----cc--chh-hccccCCCCCCCccchhhcccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQK---IWVMNVVPVHA-PDTLPVIYDR----GL--VGI-YHDWCESFGTYPRSYDLLHADH 616 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~---vWVMNvvp~~~-~~tL~vI~~R----GL--ig~-yhdwce~f~typrTyDLlHa~~ 616 (689)
..|+|+++|.|.+++.|...- . +|+-++. +..+...-++ |+ |-+ ..|..+.++ -+.+||+|.+.+
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECC
Confidence 479999999999998886531 1 1222222 1222222221 22 111 123322222 146899999887
Q ss_pred ccccccCCcCCccceeeeeccccccCcEEEEeCc
Q 044932 617 LFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK 650 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~ 650 (689)
.+.... -++-|+|+|||.+++--.
T Consensus 155 ~~~~~~----------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 155 AGPKIP----------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp BBSSCC----------HHHHHTEEEEEEEEEEES
T ss_pred chHHHH----------HHHHHHcCCCcEEEEEEC
Confidence 775322 367799999999988743
No 463
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=93.27 E-value=0.053 Score=56.74 Aligned_cols=136 Identities=14% Similarity=0.150 Sum_probs=84.5
Q ss_pred CCCCCeeEEeecCCcchhHHHHhccC-C-ceEEEeccCCCCCchhhh---hccccch----hhccccCCCCCCCccchhh
Q 044932 542 IDWSKIRNVMDMKSIYGGFAAALAQQ-K-IWVMNVVPVHAPDTLPVI---YDRGLVG----IYHDWCESFGTYPRSYDLL 612 (689)
Q Consensus 542 ~~~~~iRNvmDMna~~GgFAAal~~~-~-vWVMNvvp~~~~~tL~vI---~~RGLig----~yhdwce~f~typrTyDLl 612 (689)
++++.++.|+|.++|.|.++.+|... | +- ++-.+-|..+... ...++.+ +-||. |...+-.+|++
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~---~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~---~~~~~~~~D~~ 248 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPGCK---ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDF---FKDPLPEADLY 248 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSSCE---EEEEECHHHHHHHHHHSCC--CCSEEEEESCT---TTSCCCCCSEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCCce---eEeccCHHHHHHHHHhhhhcccCceeeecCcc---ccCCCCCceEE
Confidence 45667889999999999999999753 2 22 2222223222111 1111111 12332 32334468999
Q ss_pred ccccccccccC-CcCCccceeeeeccccccCcEEEEeCch--------------h------------hHHHHHHHHhhcc
Q 044932 613 HADHLFSRLKS-RCRQPVSIVVEMDRILRPGGWAIVRDKV--------------E------------ILDPLEGILRSLH 665 (689)
Q Consensus 613 Ha~~lfs~~~~-~c~~~~~illEmDRILRP~G~~iirD~~--------------~------------~l~~v~~i~~~lr 665 (689)
....+|-.|.+ .|. .||-++=|.|+|||.++|-|.+ + ...+.+.++..--
T Consensus 249 ~~~~vlh~~~d~~~~---~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 249 ILARVLHDWADGKCS---HLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAG 325 (353)
T ss_dssp EEESSGGGSCHHHHH---HHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT
T ss_pred EeeeecccCCHHHHH---HHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 99999998876 454 4889999999999999887521 1 1245666776666
Q ss_pred eeE-EEeecCCCceEEEEEecc
Q 044932 666 WEI-RMTYAQDKEGILCAQKTM 686 (689)
Q Consensus 666 W~~-~~~~~~~~E~iL~~~K~~ 686 (689)
|.. ++......-.+++|+|..
T Consensus 326 f~~v~v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 326 FRDFQFKKTGAIYDAILARKGT 347 (353)
T ss_dssp CEEEEEECCSSSCEEEEEECCC
T ss_pred CceEEEEEcCCceEEEEEEecC
Confidence 653 444334456789999975
No 464
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=93.19 E-value=0.05 Score=57.18 Aligned_cols=96 Identities=16% Similarity=0.264 Sum_probs=60.2
Q ss_pred CCCeeEEeecCCcchhHHHHhcc--CCceEEEeccCCCCCchhhhhcc-ccchhhccccCCCCCCCccchhhcccccccc
Q 044932 544 WSKIRNVMDMKSIYGGFAAALAQ--QKIWVMNVVPVHAPDTLPVIYDR-GLVGIYHDWCESFGTYPRSYDLLHADHLFSR 620 (689)
Q Consensus 544 ~~~iRNvmDMna~~GgFAAal~~--~~vWVMNvvp~~~~~tL~vI~~R-GLig~yhdwce~f~typrTyDLlHa~~lfs~ 620 (689)
....+.|+|.++|.|.++.+|.. ..+-+.. ++-|..+...-.+ ++-=+-+|.-++ +|.. |+|.+..+|..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~v~~~~~d~~~~---~p~~-D~v~~~~vlh~ 273 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAIN---FDLPHVIQDAPAFSGVEHLGGDMFDG---VPKG-DAIFIKWICHD 273 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE---EECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEE---EehHHHHHhhhhcCCCEEEecCCCCC---CCCC-CEEEEechhhc
Confidence 34578899999999999999975 2332211 1111111111011 111122344443 4544 99999999988
Q ss_pred ccCC-cCCccceeeeeccccccCcEEEEeC
Q 044932 621 LKSR-CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 621 ~~~~-c~~~~~illEmDRILRP~G~~iirD 649 (689)
|.+. |. .||-++=|.|+|||.++|-|
T Consensus 274 ~~~~~~~---~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 274 WSDEHCL---KLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp BCHHHHH---HHHHHHHHHSCTTCEEEEEE
T ss_pred CCHHHHH---HHHHHHHHHcCCCCEEEEEE
Confidence 7653 33 47889999999999999865
No 465
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=93.19 E-value=0.017 Score=57.55 Aligned_cols=94 Identities=14% Similarity=0.124 Sum_probs=54.0
Q ss_pred eeEEeecCCcchhHHHHhccC-C-ceEEEeccCCC-CCchhh----hhccccc---hhhc-cccCCCCCC------Cccc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-K-IWVMNVVPVHA-PDTLPV----IYDRGLV---GIYH-DWCESFGTY------PRSY 609 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~-vWVMNvvp~~~-~~tL~v----I~~RGLi---g~yh-dwce~f~ty------prTy 609 (689)
-++|+|+++|.|.++..|... + -. .|+-++. +..+.+ +-..|+- -+.+ |..+.++.+ +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDG--KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTC--EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 358999999999998887642 1 11 2333332 222221 2223441 1211 222322333 5789
Q ss_pred hhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 610 DLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 610 DLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
|+|-+++-.. . ...++-++-|+|||||.+++.+
T Consensus 158 D~V~~d~~~~------~-~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADKD------N-YLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCST------T-HHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCchH------H-HHHHHHHHHHhCCCCeEEEEec
Confidence 9997764311 1 2345667789999999999975
No 466
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=93.16 E-value=0.012 Score=56.30 Aligned_cols=98 Identities=9% Similarity=0.080 Sum_probs=57.0
Q ss_pred EEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhh----cccc----chhhc-cccCCCCCC-Ccc-chhhcccc
Q 044932 549 NVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIY----DRGL----VGIYH-DWCESFGTY-PRS-YDLLHADH 616 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~----~RGL----ig~yh-dwce~f~ty-prT-yDLlHa~~ 616 (689)
.|+|+.+|.|+|+.++..... -.|+-++.. ..+...- ..|+ |-+++ |..+.++.. +.+ ||+|-++.
T Consensus 56 ~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp EEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred eEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 699999999999887554432 134444432 2232221 1233 11121 222222222 568 99998887
Q ss_pred ccccccCCcCCccceeeee--ccccccCcEEEEeCchhh
Q 044932 617 LFSRLKSRCRQPVSIVVEM--DRILRPGGWAIVRDKVEI 653 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEm--DRILRP~G~~iirD~~~~ 653 (689)
.|. .-. ...++-++ -|+|+|||.+++......
T Consensus 134 ~~~----~~~-~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 134 PFH----FNL-AEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSS----SCH-HHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCC----Ccc-HHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 764 112 24556666 689999999999866554
No 467
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=93.12 E-value=0.014 Score=63.97 Aligned_cols=111 Identities=12% Similarity=0.157 Sum_probs=67.5
Q ss_pred eeEEeecCCc------chhHHHHhccC---CceEEEeccCCC-CCchhhhhccccchhhccccCCCCCC------Cccch
Q 044932 547 IRNVMDMKSI------YGGFAAALAQQ---KIWVMNVVPVHA-PDTLPVIYDRGLVGIYHDWCESFGTY------PRSYD 610 (689)
Q Consensus 547 iRNvmDMna~------~GgFAAal~~~---~vWVMNvvp~~~-~~tL~vI~~RGLig~yhdwce~f~ty------prTyD 610 (689)
-.+|||+++| .||.+..|... .. .|+=++- +.. ++...=|=+++-=++.+++- +.+||
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a---~V~GVDiSp~m---~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG---QIYGLDIMDKS---HVDELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC---EEEEEESSCCG---GGCBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC---EEEEEECCHHH---hhcCCCcEEEEecccccchhhhhhcccCCcc
Confidence 4689999999 78877777542 22 2333332 121 11111111111112222222 47899
Q ss_pred hhccccccccccCCcCCccceeeeeccccccCcEEEEeCc------------------hhhHHHHHHHHhhcceeE
Q 044932 611 LLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK------------------VEILDPLEGILRSLHWEI 668 (689)
Q Consensus 611 LlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~------------------~~~l~~v~~i~~~lrW~~ 668 (689)
+|.+++.. +. .. ....|-||=|+|||||+++|.|- ..++..++.++..++|..
T Consensus 291 lVisdgsH--~~--~d-~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 291 IVIDDGSH--IN--AH-VRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp EEEECSCC--CH--HH-HHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred EEEECCcc--cc--hh-HHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 99987642 21 23 24578899999999999999752 348999999999998763
No 468
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=93.11 E-value=0.053 Score=55.60 Aligned_cols=136 Identities=10% Similarity=0.056 Sum_probs=70.3
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhhc------ccc----chhh-ccccCCCCCCCccchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIYD------RGL----VGIY-HDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~~------RGL----ig~y-hdwce~f~typrTyDLlHa 614 (689)
++|+|+++|.|+++.+|... ++. +|+-++- +.-+.+.-+ .|+ +-+. .|..+.+...+.+||+|-+
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 68999999999999999876 432 2322222 111211111 111 1111 1222222334688999987
Q ss_pred cccccc-ccCCcC-CccceeeeeccccccCcEEEEeCc-----hhhHHHHHHHHhhcceeEEEee------cCCCceEEE
Q 044932 615 DHLFSR-LKSRCR-QPVSIVVEMDRILRPGGWAIVRDK-----VEILDPLEGILRSLHWEIRMTY------AQDKEGILC 681 (689)
Q Consensus 615 ~~lfs~-~~~~c~-~~~~illEmDRILRP~G~~iirD~-----~~~l~~v~~i~~~lrW~~~~~~------~~~~E~iL~ 681 (689)
+.. .. ....-. ....++-++-|+|+|||.+++.-. .+.+..+.+.++..--.+.... ..+.-.+++
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEE
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEE
Confidence 632 22 111000 013567788999999999999732 2334444443433333444332 123356888
Q ss_pred EEecc
Q 044932 682 AQKTM 686 (689)
Q Consensus 682 ~~K~~ 686 (689)
|.|++
T Consensus 249 as~~~ 253 (296)
T 1inl_A 249 ASKGI 253 (296)
T ss_dssp EESSC
T ss_pred ecCCC
Confidence 88864
No 469
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=93.07 E-value=0.021 Score=55.79 Aligned_cols=104 Identities=20% Similarity=0.235 Sum_probs=65.1
Q ss_pred eEEeecCCcchhHHHHhccC---CceEEEeccCCCC-Cchhhhh----ccccch----hhccccCCCCCCCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHAP-DTLPVIY----DRGLVG----IYHDWCESFGTYPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~~-~tL~vI~----~RGLig----~yhdwce~f~typrTyDLlHa~ 615 (689)
..|+|+++|.|+++.+|... ..- |+-++-. ..+...- ..|+-. +..|..+.|+ +.+||+|-++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~---v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~v~~~ 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGR---VVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIE--EENVDHVILD 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSE---EEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCC--CCSEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeE---EEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccC--CCCcCEEEEC
Confidence 46999999999999998754 222 3333322 2232222 224322 3345665543 4579998652
Q ss_pred cccccccCCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcc
Q 044932 616 HLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLH 665 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lr 665 (689)
. .. ...+|-++-|+|+|||.+++-. ..+-+.++...+....
T Consensus 170 -----~---~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 170 -----L---PQ-PERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp -----S---SC-GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred -----C---CC-HHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 1 12 2457889999999999999864 4556666777776655
No 470
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.06 E-value=0.024 Score=53.99 Aligned_cols=119 Identities=18% Similarity=0.149 Sum_probs=65.7
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhh--------hcccc--chhhccccCCCCCCCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVI--------YDRGL--VGIYHDWCESFGTYPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI--------~~RGL--ig~yhdwce~f~typrTyDLlHa~ 615 (689)
..|+|+++|.|.++..|... |-. +|+-++-. .-|..+ ..+|+ |-+.+.-.+.++..+.+ |.+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~--~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSR--LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTE--EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 46999999999999999764 111 24444432 333322 13443 22222223345544445 666521
Q ss_pred ccccccc--CCcCCccceeeeeccccccCcEEEEeC------------------chh-hHHHHHHHHhhcceeEEE
Q 044932 616 HLFSRLK--SRCRQPVSIVVEMDRILRPGGWAIVRD------------------KVE-ILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 616 ~lfs~~~--~~c~~~~~illEmDRILRP~G~~iirD------------------~~~-~l~~v~~i~~~lrW~~~~ 670 (689)
.-+.... ..-+ ...+|-+|-|+|+|||.++|.- ... +...++.++..-.|.+.-
T Consensus 106 ~~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 106 MPWGSLLRGVLGS-SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp SCCHHHHHHHHTS-SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccchhhhhhhhcc-HHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 1111100 0011 1457889999999999999952 112 234477788888887643
No 471
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=93.04 E-value=0.23 Score=53.69 Aligned_cols=113 Identities=13% Similarity=0.017 Sum_probs=65.4
Q ss_pred HHHHHHHHhhcccccCCCCCCeEEEECCccchhHHHhhcC---CeEEEEcCCcccHHHHHHHHHHcCC---------C--
Q 044932 290 LHYLESIEEMVPDIEWGKNIRVVLEIGSADLSFVASLLAK---EVLTLTVGLKDDLVDLAQVALERGF---------P-- 355 (689)
Q Consensus 290 ~~Yid~L~~~Lp~l~~G~~~R~VLDVGCGtGsfaa~La~~---~V~gmDIsp~D~seamlq~A~eRGL---------~-- 355 (689)
..|.+.|... +.+. . +.++||=||-|.|..+..++.. .|+.++|+| ..++.|++.-. +
T Consensus 190 ~~Y~e~l~h~-~l~~-~-~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp-----~VVe~ar~yfp~~~~~~~d~pr~ 261 (381)
T 3c6k_A 190 LAYTRAIMGS-GKED-Y-TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQ-----MVIDGCKKYMRKTCGDVLDNLKG 261 (381)
T ss_dssp HHHHHHHTTT-TCCC-C-TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCH-----HHHHHHHHHCCC----CCSSSEE
T ss_pred HHHHHHHHHH-Hhhc-C-CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCH-----HHHHHHHhhchhhhhhhhccccc
Confidence 3566655432 2222 2 4689999999999998888764 377788876 46677665310 0
Q ss_pred --cEEecCCCCC----CCCCCCCcceEEecccc-----cccccc----HHHHHHHHHhccCCCcEEEEEc
Q 044932 356 --AVVSPLGNRR----LPFPSGVFDAIHCDGCS-----ITWHAH----GGKLLLEMNRILRPSGYFILST 410 (689)
Q Consensus 356 --~i~~~~dt~~----LPFpD~SFDlVhcs~cl-----i~W~~d----~~~aL~EI~RVLRPGG~fVIsd 410 (689)
..+...|+.. .+=..+.||+|+.-... .+.... -..++..+.|+|+|||.++...
T Consensus 262 ~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 262 DCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp TTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 1122222210 00124679999853111 010000 1356778899999999999864
No 472
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.03 E-value=0.066 Score=54.78 Aligned_cols=40 Identities=23% Similarity=0.124 Sum_probs=29.9
Q ss_pred CCCeEEEECCccchhHHHhh--cCCeEEEEcCCcccHHHHHHHHHHc
Q 044932 308 NIRVVLEIGSADLSFVASLL--AKEVLTLTVGLKDDLVDLAQVALER 352 (689)
Q Consensus 308 ~~R~VLDVGCGtGsfaa~La--~~~V~gmDIsp~D~seamlq~A~eR 352 (689)
...+|||++||+|.++.+++ ++.++|+|+++ .+++.|.+|
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~-----~~~~~a~~r 276 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGRRALGVELVP-----RYAQLAKER 276 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCEEEEEESCH-----HHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCH-----HHHHHHHHH
Confidence 35689999999999776655 45799999886 355555554
No 473
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.02 E-value=0.05 Score=52.47 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=63.7
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhcc----cc---ch-hhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYDR----GL---VG-IYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~R----GL---ig-~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+|+++|.|.++.+|.... .+|+-++- +..+...-++ |+ +- +..|+.+.+ .-+.+||+|-++.
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVDV-- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEECS--
T ss_pred CEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEECC--
Confidence 379999999999998887652 23444443 2333332222 33 11 123344432 0236799886521
Q ss_pred ccccCCcCCccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhccee
Q 044932 619 SRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWE 667 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~ 667 (689)
-. ...+|-++-|+|+|||.+++-.. .+-+..+...+... |.
T Consensus 167 ------~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 167 ------RE-PWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp ------SC-GGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred ------cC-HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 12 24577888999999999988765 45666666666554 44
No 474
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=93.01 E-value=0.006 Score=57.14 Aligned_cols=99 Identities=18% Similarity=0.168 Sum_probs=58.2
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhh----hcccc--chhhc-cccCCCCCC-Cccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVI----YDRGL--VGIYH-DWCESFGTY-PRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI----~~RGL--ig~yh-dwce~f~ty-prTyDLlHa~~lf 618 (689)
..|+|+.+|.|.++.++...+.. .|+-++.. ..+... ...|+ +-+++ |+.+....+ +.+||+|-++..|
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 46999999999999866655432 23333322 222221 12233 11222 222211112 6799999988766
Q ss_pred ccccCCcCCccceeeeecc--ccccCcEEEEeCch
Q 044932 619 SRLKSRCRQPVSIVVEMDR--ILRPGGWAIVRDKV 651 (689)
Q Consensus 619 s~~~~~c~~~~~illEmDR--ILRP~G~~iirD~~ 651 (689)
.... -. +..++-++-| +|+|||.+++....
T Consensus 124 ~~~~--~~-~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 124 NVDS--AD-VDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TSCH--HH-HHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred Ccch--hh-HHHHHHHHHhcCccCCCeEEEEEecC
Confidence 5421 22 3567788888 99999999998543
No 475
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=92.96 E-value=0.1 Score=52.90 Aligned_cols=139 Identities=10% Similarity=0.122 Sum_probs=73.1
Q ss_pred CeeEEeecCCcchhHHHHhccC-CceEEEeccCCCCCchhhhhc------ccc----chhhc-cccCCCCCCCccchhhc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAPDTLPVIYD------RGL----VGIYH-DWCESFGTYPRSYDLLH 613 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~~tL~vI~~------RGL----ig~yh-dwce~f~typrTyDLlH 613 (689)
.-++|+|+++|.|+++..+... ++--+-+|=.+. .-+.+.-+ .++ +-+++ |--+-+...+.+||+|-
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~-~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDG-KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCH-HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCH-HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3578999999999999998876 432211222221 11111100 011 11111 11111223468999999
Q ss_pred cccccccccCCcC-CccceeeeeccccccCcEEEEeCc-----hhhHHHHHHHHhhcceeEEEee------cCCCceEEE
Q 044932 614 ADHLFSRLKSRCR-QPVSIVVEMDRILRPGGWAIVRDK-----VEILDPLEGILRSLHWEIRMTY------AQDKEGILC 681 (689)
Q Consensus 614 a~~lfs~~~~~c~-~~~~illEmDRILRP~G~~iirD~-----~~~l~~v~~i~~~lrW~~~~~~------~~~~E~iL~ 681 (689)
++... .....-. ....++-++-|+|+|||.+++.-. .+.+..+.+.++..=-.+.... ..+.-.+++
T Consensus 154 ~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 154 VDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp ESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEE
T ss_pred ECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEE
Confidence 86543 2211100 013467788999999999999832 3344555444544433444332 122346888
Q ss_pred EEecc
Q 044932 682 AQKTM 686 (689)
Q Consensus 682 ~~K~~ 686 (689)
|.|++
T Consensus 233 ask~~ 237 (275)
T 1iy9_A 233 GSKKY 237 (275)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 88864
No 476
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=92.93 E-value=0.047 Score=52.98 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=62.3
Q ss_pred eEEeecCCcchhHHHHhccC---CceEEEeccCCC-CCchhhhhcc-----cc--ch-hhccccCCCCCCCccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHA-PDTLPVIYDR-----GL--VG-IYHDWCESFGTYPRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~---~vWVMNvvp~~~-~~tL~vI~~R-----GL--ig-~yhdwce~f~typrTyDLlHa~ 615 (689)
..|+|+++|.|.++.+|... .. +|+-++. +..+...-.+ |. |- +..|..+. +.-+.+||+|-++
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAAYDGVALD 173 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTCEEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCCcCEEEEC
Confidence 47999999999999988754 22 2333332 2233222222 31 11 12244433 2223689998763
Q ss_pred cccccccCCcCCccceeeeeccccccCcEEEEeCch-hhHHHHHHHHhhccee
Q 044932 616 HLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-EILDPLEGILRSLHWE 667 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~-~~l~~v~~i~~~lrW~ 667 (689)
. -. ...+|-++-|+|+|||.+++-... +-+.++...+....|.
T Consensus 174 -----~---~~-~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 174 -----L---ME-PWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp -----S---SC-GGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred -----C---cC-HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 1 12 245788999999999998887643 3555555555555454
No 477
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=92.76 E-value=0.054 Score=56.89 Aligned_cols=95 Identities=16% Similarity=0.246 Sum_probs=60.2
Q ss_pred CCeeEEeecCCcchhHHHHhcc--CCceEEEeccCCCCCchhhhhcc-ccchhhccccCCCCCCCccchhhccccccccc
Q 044932 545 SKIRNVMDMKSIYGGFAAALAQ--QKIWVMNVVPVHAPDTLPVIYDR-GLVGIYHDWCESFGTYPRSYDLLHADHLFSRL 621 (689)
Q Consensus 545 ~~iRNvmDMna~~GgFAAal~~--~~vWVMNvvp~~~~~tL~vI~~R-GLig~yhdwce~f~typrTyDLlHa~~lfs~~ 621 (689)
...+.|+|+++|.|.++.+|.. ..+-+.. ++-|..+...-.+ ++-=+-+|..++ +|.. |+|.+..+|..|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~v~~~~~D~~~~---~p~~-D~v~~~~vlh~~ 272 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVN---FDLPHVISEAPQFPGVTHVGGDMFKE---VPSG-DTILMKWILHDW 272 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEE---EECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEE---ecCHHHHHhhhhcCCeEEEeCCcCCC---CCCC-CEEEehHHhccC
Confidence 4578899999999999999975 2332221 1111111111111 122223444444 4544 999999999888
Q ss_pred cCC-cCCccceeeeeccccccCcEEEEeC
Q 044932 622 KSR-CRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 622 ~~~-c~~~~~illEmDRILRP~G~~iirD 649 (689)
.+. |. .||-++=|.|+|||.++|-|
T Consensus 273 ~d~~~~---~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 273 SDQHCA---TLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp CHHHHH---HHHHHHHHHSCTTCEEEEEE
T ss_pred CHHHHH---HHHHHHHHHcCCCCEEEEEE
Confidence 643 43 47899999999999999865
No 478
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=92.62 E-value=0.0076 Score=57.85 Aligned_cols=90 Identities=16% Similarity=0.090 Sum_probs=50.9
Q ss_pred eEEeecCCcchhHHHHhccC------CceEEEeccCCC-CCchhhh----hcccc-------chh-hccccCCCC---CC
Q 044932 548 RNVMDMKSIYGGFAAALAQQ------KIWVMNVVPVHA-PDTLPVI----YDRGL-------VGI-YHDWCESFG---TY 605 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~------~vWVMNvvp~~~-~~tL~vI----~~RGL-------ig~-yhdwce~f~---ty 605 (689)
..|+|+++|.|.+++.|... +-. +|+-++. +..+... ...|+ |-+ ..|..+.+. .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNS--YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTC--EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCC--EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 47999999999999988753 111 1222222 1222111 11231 111 112222110 12
Q ss_pred CccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 606 PRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 606 prTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
+.+||+|+++..+. .++-++-|+|+|||.+++--
T Consensus 160 ~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASAS----------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 36799998877664 24567789999999998863
No 479
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=92.60 E-value=0.044 Score=55.03 Aligned_cols=138 Identities=15% Similarity=0.108 Sum_probs=69.1
Q ss_pred cCCCCCCeeEEeecCCcchhHHHHhccC-----CceEEEeccCCCCCchhhhhcc-ccchhhccccCCC--CCCCccchh
Q 044932 540 LGIDWSKIRNVMDMKSIYGGFAAALAQQ-----KIWVMNVVPVHAPDTLPVIYDR-GLVGIYHDWCESF--GTYPRSYDL 611 (689)
Q Consensus 540 l~~~~~~iRNvmDMna~~GgFAAal~~~-----~vWVMNvvp~~~~~tL~vI~~R-GLig~yhdwce~f--~typrTyDL 611 (689)
+.++++ -.|||++||.|+|++.|.+. .|.-+-+-|.-...-+.....| .+..+..|-..+. ...+.+||+
T Consensus 72 ~~l~~g--~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 72 NPIRKG--TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CSCCTT--CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred cCCCCC--CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEE
Confidence 446665 46999999999999887642 2332222110000001111122 2333334433321 123467899
Q ss_pred hccccccccccCCcCCccceee-eeccccccCcEEEEe----------CchhhHHHHHHHHh--hcceeEEEee-c-CCC
Q 044932 612 LHADHLFSRLKSRCRQPVSIVV-EMDRILRPGGWAIVR----------DKVEILDPLEGILR--SLHWEIRMTY-A-QDK 676 (689)
Q Consensus 612 lHa~~lfs~~~~~c~~~~~ill-EmDRILRP~G~~iir----------D~~~~l~~v~~i~~--~lrW~~~~~~-~-~~~ 676 (689)
|.++..+ ... ..+|+ .+.|+|+|||.+++- +..++...+...+. +++..-.+.- . +..
T Consensus 150 I~~d~a~------~~~-~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~ 222 (232)
T 3id6_C 150 LYVDIAQ------PDQ-TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKD 222 (232)
T ss_dssp EEECCCC------TTH-HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSS
T ss_pred EEecCCC------hhH-HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCc
Confidence 8776443 232 34454 456699999999975 11123333334443 3444333321 1 224
Q ss_pred ceEEEEEecc
Q 044932 677 EGILCAQKTM 686 (689)
Q Consensus 677 E~iL~~~K~~ 686 (689)
.-+++++|.+
T Consensus 223 h~~v~~~~~~ 232 (232)
T 3id6_C 223 HAIVLSKYKG 232 (232)
T ss_dssp CEEEEEEEC-
T ss_pred eEEEEEEeCC
Confidence 5688888763
No 480
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=92.29 E-value=0.096 Score=52.33 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=64.0
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhcc-----cc--ch-hhccccCCCCCCCccchhhcccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYDR-----GL--VG-IYHDWCESFGTYPRSYDLLHADH 616 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~R-----GL--ig-~yhdwce~f~typrTyDLlHa~~ 616 (689)
..|+|+++|.|+++..|... +-. +|+-++. +..+...-++ |+ |- +..|..+.|+ +.+||+|-++
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi~~- 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKG--TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVIAD- 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSS--EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEEEC-
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEEEc-
Confidence 47999999999999988754 211 2333332 2233222222 42 11 1234444332 3679998762
Q ss_pred ccccccCCcCCccceeeeeccccccCcEEEEeCchh-hHHHHHHHHhhcceeE
Q 044932 617 LFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE-ILDPLEGILRSLHWEI 668 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~-~l~~v~~i~~~lrW~~ 668 (689)
.. . ...+|-++-|+|+|||.+++-.... -+..+...+....|..
T Consensus 187 ----~~---~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 187 ----IP---D-PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp ----CS---C-GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred ----Cc---C-HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 11 2 2457888999999999998876443 5566666666555553
No 481
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=92.28 E-value=0.012 Score=56.90 Aligned_cols=87 Identities=16% Similarity=0.152 Sum_probs=50.4
Q ss_pred eEEeecCCcchhHHHHhccC----------CceEEEeccCCCCCchhhhh----cccc-------ch-hhccccCCCCCC
Q 044932 548 RNVMDMKSIYGGFAAALAQQ----------KIWVMNVVPVHAPDTLPVIY----DRGL-------VG-IYHDWCESFGTY 605 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~----------~vWVMNvvp~~~~~tL~vI~----~RGL-------ig-~yhdwce~f~ty 605 (689)
..|+|+++|.|.+++.|... .|...-+-| .-+...- ..|+ |- +..|..+.++.
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA----ELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP- 160 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH----HHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH----HHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-
Confidence 37999999999999988652 233222111 1221111 1110 11 12233333221
Q ss_pred CccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 606 PRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 606 prTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..+||+|++...+. .++-++-|+|+|||.+++--
T Consensus 161 ~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 NAPYNAIHVGAAAP----------DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp GCSEEEEEECSCBS----------SCCHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEECCchH----------HHHHHHHHHhcCCCEEEEEE
Confidence 26899999877653 24467789999999999863
No 482
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=92.19 E-value=0.011 Score=54.28 Aligned_cols=97 Identities=16% Similarity=0.190 Sum_probs=55.1
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhh----hhcccc---chhh-ccccCCCCCC---Cccchhhccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPV----IYDRGL---VGIY-HDWCESFGTY---PRSYDLLHAD 615 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~v----I~~RGL---ig~y-hdwce~f~ty---prTyDLlHa~ 615 (689)
..|+|+++|.|+|+.++...+.. +|+-++.. ..+.. +-..|+ +-++ .|+.+.++.. +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 47999999999998877655422 23333321 22211 112232 2222 2333322211 5789999988
Q ss_pred cccccccCCcCCccceeeee--ccccccCcEEEEeCch
Q 044932 616 HLFSRLKSRCRQPVSIVVEM--DRILRPGGWAIVRDKV 651 (689)
Q Consensus 616 ~lfs~~~~~c~~~~~illEm--DRILRP~G~~iirD~~ 651 (689)
..|... . ...++-.+ -|+|+|||.+++....
T Consensus 124 ~~~~~~----~-~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 124 PPYAKQ----E-IVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCGGGC----C-HHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCch----h-HHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 776521 1 13334444 8999999999997443
No 483
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=92.03 E-value=0.043 Score=56.20 Aligned_cols=91 Identities=19% Similarity=0.181 Sum_probs=51.1
Q ss_pred eEEeecCCcchhHHHHhccC-CceEEEeccCC--C---C---Cch--hhhhc--cccchhhccccCCCCCCCccchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVH--A---P---DTL--PVIYD--RGLVGIYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~-~vWVMNvvp~~--~---~---~tL--~vI~~--RGLig~yhdwce~f~typrTyDLlHa 614 (689)
..|+|+++|.|+|+..|... .|.-+-+-|.. + + +.+ .+.+- .| |. +.|+ +.+||+|-+
T Consensus 84 ~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~------D~-~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKV------DV-TKME--PFQADTVLC 154 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSC------CG-GGCC--CCCCSEEEE
T ss_pred CEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccC------cH-hhCC--CCCcCEEEE
Confidence 57999999999999888765 33333333320 0 0 000 11111 11 21 2244 689999988
Q ss_pred cccccccc---CCcCCccceeeeeccccccCc--EEEEe
Q 044932 615 DHLFSRLK---SRCRQPVSIVVEMDRILRPGG--WAIVR 648 (689)
Q Consensus 615 ~~lfs~~~---~~c~~~~~illEmDRILRP~G--~~iir 648 (689)
+..+.... +.-.. ..+|-++.|+|+||| .+++.
T Consensus 155 d~~~~~~~~~~d~~~~-l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 155 DIGESNPTAAVEASRT-LTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCCCCSCHHHHHHHH-HHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCCcCCCchhhhHHHH-HHHHHHHHHHhccCCCcEEEEE
Confidence 75422100 00000 125678899999999 88885
No 484
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=91.95 E-value=0.063 Score=49.45 Aligned_cols=59 Identities=25% Similarity=0.383 Sum_probs=41.7
Q ss_pred CCccchhhccccccccccCCcCCccceeeeeccccccCcEEEEeCchh----------hHHHHHHHHhhcce
Q 044932 605 YPRSYDLLHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKVE----------ILDPLEGILRSLHW 666 (689)
Q Consensus 605 yprTyDLlHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~~----------~l~~v~~i~~~lrW 666 (689)
-+.+||+|.+..+|.... .+ ...+|-|+-|+|||||++++.+... .+..+...+..-.+
T Consensus 60 ~~~~fD~V~~~~~l~~~~--~~-~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTT--LH-SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CSSCEEEEEECCSTTCCC--CC-CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCCCEeEEEECChhhhcc--cC-HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 367999999988776551 23 2568999999999999999964321 15566666654444
No 485
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=91.91 E-value=0.02 Score=59.57 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=59.7
Q ss_pred CeeEEeecCCcchhHHHHhccC--CceEEEeccCCCCCchhhhhc-cccchhhccccCCCCCCCccchhhcccccccccc
Q 044932 546 KIRNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAPDTLPVIYD-RGLVGIYHDWCESFGTYPRSYDLLHADHLFSRLK 622 (689)
Q Consensus 546 ~iRNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~~tL~vI~~-RGLig~yhdwce~f~typrTyDLlHa~~lfs~~~ 622 (689)
....|+|+++|.|.++.+|... .+-+..+ +-|..+...-. .++--+-+|..++ +| .||+|.+.++|..+.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~v~~~~~d~~~~---~~-~~D~v~~~~vlh~~~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVF---DQPQVVGNLTGNENLNFVGGDMFKS---IP-SADAVLLKWVLHDWN 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEE---ECHHHHSSCCCCSSEEEEECCTTTC---CC-CCSEEEEESCGGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEe---ccHHHHhhcccCCCcEEEeCccCCC---CC-CceEEEEcccccCCC
Confidence 4578999999999999999753 2322211 11111110000 1222223444443 45 499999999998886
Q ss_pred CC-cCCccceeeeecccccc---CcEEEEeC
Q 044932 623 SR-CRQPVSIVVEMDRILRP---GGWAIVRD 649 (689)
Q Consensus 623 ~~-c~~~~~illEmDRILRP---~G~~iirD 649 (689)
+. |. .+|-++-|+|+| ||.++|-|
T Consensus 266 d~~~~---~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 266 DEQSL---KILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp HHHHH---HHHHHHHHHTGGGGGGCEEEEEE
T ss_pred HHHHH---HHHHHHHHhCCCCCCCcEEEEEE
Confidence 53 33 488999999999 99998854
No 486
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=91.86 E-value=0.022 Score=55.29 Aligned_cols=89 Identities=18% Similarity=0.236 Sum_probs=48.9
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhhc----cccchh---hccccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIYD----RGLVGI---YHDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~~----RGLig~---yhdwce~f~typrTyDLlHa~~lfs 619 (689)
.+|+|+++|.|.+++.|...-- .+|+-++. +..+...-. .|+-.+ ..|....|+. ...||+|.++..+.
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIVTAGAP 169 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEECSBBS
T ss_pred CEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCCccEEEECCcHH
Confidence 4799999999999998875310 12232321 122221111 222111 1122222211 12499998876654
Q ss_pred cccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
. +.-++-|+|+|||.++|--
T Consensus 170 ~----------~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 170 K----------IPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp S----------CCHHHHHTEEEEEEEEEEE
T ss_pred H----------HHHHHHHhcCCCcEEEEEE
Confidence 3 2336778999999998864
No 487
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=91.77 E-value=0.045 Score=56.56 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=54.3
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCCC-Cchhhhhcc----cc--chhhccccCCCCCCCccchhhcccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHAP-DTLPVIYDR----GL--VGIYHDWCESFGTYPRSYDLLHADHLF 618 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~~-~tL~vI~~R----GL--ig~yhdwce~f~typrTyDLlHa~~lf 618 (689)
..|+||.||.|+++..|... +-. .|+-++-. .-|..+-.+ |+ |-+.+.=...++.++.+||+|-++--.
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~--~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDG--VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPC 197 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCS--EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCC
Confidence 36999999999999888742 111 13333322 233333222 43 112221122333356789999875333
Q ss_pred cccc---CCcC---------------CccceeeeeccccccCcEEEEe
Q 044932 619 SRLK---SRCR---------------QPVSIVVEMDRILRPGGWAIVR 648 (689)
Q Consensus 619 s~~~---~~c~---------------~~~~illEmDRILRP~G~~iir 648 (689)
|... ..=+ +...+|-++-|+|+|||.+++.
T Consensus 198 sg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 198 TGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp TSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 2211 0000 0035778899999999999995
No 488
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=91.75 E-value=0.19 Score=52.47 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=31.0
Q ss_pred CCeEEEECCccchhHHHhhcC--CeEEEEcCCcccHHHHHHHHHH
Q 044932 309 IRVVLEIGSADLSFVASLLAK--EVLTLTVGLKDDLVDLAQVALE 351 (689)
Q Consensus 309 ~R~VLDVGCGtGsfaa~La~~--~V~gmDIsp~D~seamlq~A~e 351 (689)
..++||.+||.|+.+.+|+.+ .|+|+|.+| .+++.|.+
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp-----~Ai~~A~~ 62 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGGRVIGLDQDP-----EAVARAKG 62 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCEEEEEESCH-----HHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCH-----HHHHHHHh
Confidence 468999999999999988875 599999886 46666654
No 489
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=91.63 E-value=0.28 Score=50.92 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=52.2
Q ss_pred hccccCCCCCCCccchhhcccccccccc-----C--CcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhhcce
Q 044932 595 YHDWCESFGTYPRSYDLLHADHLFSRLK-----S--RCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRSLHW 666 (689)
Q Consensus 595 yhdwce~f~typrTyDLlHa~~lfs~~~-----~--~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~lrW 666 (689)
..|+.+ ++ ++.+||+|.++....... + .-.++..+|-++-|+|+|||.+++-. ...-...+..+++...|
T Consensus 112 ~gD~~~-~~-~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF 189 (290)
T 2xyq_A 112 IGDCAT-VH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSW 189 (290)
T ss_dssp ESCGGG-CC-CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEE
T ss_pred ECcccc-CC-ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCC
Confidence 345544 22 458899999874322110 0 01111357778999999999999854 22233467777777644
Q ss_pred -eEEEee--cCCCceEEEEEe
Q 044932 667 -EIRMTY--AQDKEGILCAQK 684 (689)
Q Consensus 667 -~~~~~~--~~~~E~iL~~~K 684 (689)
.+++.. ....|.+|+|+.
T Consensus 190 ~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 190 WTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp EEEEEEGGGTTSSCEEEEEEE
T ss_pred cEEEEEEcCCCchheEEecCC
Confidence 455541 233688888875
No 490
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=91.56 E-value=0.023 Score=62.69 Aligned_cols=94 Identities=17% Similarity=0.207 Sum_probs=58.5
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCCCch----hhhhcccc---chhhc-cccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAPDTL----PVIYDRGL---VGIYH-DWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~~tL----~vI~~RGL---ig~yh-dwce~f~typrTyDLlHa~~lfs 619 (689)
..|||+++|.|.++..|...+.. .|+-++...-+ ..+...|| |-+.+ |+-+ + .+|..||+|-+..++.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPMGY 235 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCCHH
T ss_pred CEEEEecCcccHHHHHHHHcCCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCchH
Confidence 47999999999999888766531 23333322112 22334455 22222 3322 2 3577899999987765
Q ss_pred cccCCcCCccceeeeeccccccCcEEEE
Q 044932 620 RLKSRCRQPVSIVVEMDRILRPGGWAIV 647 (689)
Q Consensus 620 ~~~~~c~~~~~illEmDRILRP~G~~ii 647 (689)
.+... .+ ..+|.++-|+|+|||.+++
T Consensus 236 ~~~~e-~~-~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 236 MLFNE-RM-LESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHTCH-HH-HHHHHHGGGGEEEEEEEES
T ss_pred hcCcH-HH-HHHHHHHHHhcCCCCEEEE
Confidence 44322 22 3466789999999999985
No 491
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=91.41 E-value=0.05 Score=55.91 Aligned_cols=137 Identities=15% Similarity=0.166 Sum_probs=71.2
Q ss_pred eeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhhc------ccc----chhh-ccccCCCCC-CCccchhh
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIYD------RGL----VGIY-HDWCESFGT-YPRSYDLL 612 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~~------RGL----ig~y-hdwce~f~t-yprTyDLl 612 (689)
-++|+|+++|.|+++..|... ++- .|+=++- +.-+.+.-+ .++ +-++ .|..+-... -+.+||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 368999999999999999865 332 2222221 111111110 010 1111 122221111 36789999
Q ss_pred ccccccccccCCcCCccceeeeeccccccCcEEEEeCch-----hhHHHHHHHHhhccee-EEEeec------CCCceEE
Q 044932 613 HADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDKV-----EILDPLEGILRSLHWE-IRMTYA------QDKEGIL 680 (689)
Q Consensus 613 Ha~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~~-----~~l~~v~~i~~~lrW~-~~~~~~------~~~E~iL 680 (689)
-++.........-.....++-++-|+|+|||.+++.... ..+..+.+.++...+. +.+... .+.-.++
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~ 253 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTL 253 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEE
Confidence 986544322111100135677899999999999996322 3556666666655453 333321 2234588
Q ss_pred EEEec
Q 044932 681 CAQKT 685 (689)
Q Consensus 681 ~~~K~ 685 (689)
+|.|.
T Consensus 254 ~as~~ 258 (304)
T 3bwc_A 254 VCSKK 258 (304)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88875
No 492
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=91.40 E-value=0.09 Score=49.44 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=68.1
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhh----hcccc-chhhccccCCCCCCCccchhhccccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVI----YDRGL-VGIYHDWCESFGTYPRSYDLLHADHLFSRL 621 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI----~~RGL-ig~yhdwce~f~typrTyDLlHa~~lfs~~ 621 (689)
..|+|+++|.|+|+.+|...+.- +|+-++. +..+... -..|+ +-+. |..+..+|.+||+|-++.-|...
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCccc
Confidence 47999999999999998766321 2333332 1222211 12232 1122 22223356799999998887765
Q ss_pred cCCcCCccceeeeeccccccCcEEEEe-CchhhHHHHHHHHhhcceeEEE
Q 044932 622 KSRCRQPVSIVVEMDRILRPGGWAIVR-DKVEILDPLEGILRSLHWEIRM 670 (689)
Q Consensus 622 ~~~c~~~~~illEmDRILRP~G~~iir-D~~~~l~~v~~i~~~lrW~~~~ 670 (689)
..... ..+|-++-|+| ||.+++. ........+..++....|++..
T Consensus 126 ~~~~~--~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 126 RKHAD--RPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp STTTT--HHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred cCCch--HHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 44333 34556666777 5555444 2667778888888777777654
No 493
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=91.31 E-value=0.072 Score=55.09 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=71.4
Q ss_pred eeEEeecCCcchhHHHHhccC-CceEEEeccCCCC-Cchhhhhc------cc-c----chhh-ccccCCCCCCCccchhh
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHAP-DTLPVIYD------RG-L----VGIY-HDWCESFGTYPRSYDLL 612 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~~-~tL~vI~~------RG-L----ig~y-hdwce~f~typrTyDLl 612 (689)
-++|+|+++|.|+++..|... ++- +|+-++-. .-+.+.-+ .| + |-+. -|..+-+...+.+||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVE--KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCC--EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCC--EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 368999999999999999876 332 22222211 11111100 11 0 1111 11111122247889999
Q ss_pred ccccccccccCCcC---C-ccceeeeeccccccCcEEEEeC------chhhHHHHHHHHhhcceeEEEee----c-CCCc
Q 044932 613 HADHLFSRLKSRCR---Q-PVSIVVEMDRILRPGGWAIVRD------KVEILDPLEGILRSLHWEIRMTY----A-QDKE 677 (689)
Q Consensus 613 Ha~~lfs~~~~~c~---~-~~~illEmDRILRP~G~~iirD------~~~~l~~v~~i~~~lrW~~~~~~----~-~~~E 677 (689)
-++.... ....+. + ...++-++-|+|+|||.+++.- ..+.+..+.+.++..--.+.... . .+.-
T Consensus 156 i~d~~~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~ 234 (314)
T 1uir_A 156 IIDLTDP-VGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNF 234 (314)
T ss_dssp EEECCCC-BSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEE
T ss_pred EECCCCc-ccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeE
Confidence 9875432 200011 0 1456778999999999999872 23445555555544433333321 1 1223
Q ss_pred eEEEEEecc
Q 044932 678 GILCAQKTM 686 (689)
Q Consensus 678 ~iL~~~K~~ 686 (689)
.+++|.|.+
T Consensus 235 ~~~~as~~~ 243 (314)
T 1uir_A 235 GFLLASDAF 243 (314)
T ss_dssp EEEEEESSS
T ss_pred EEEEEECCC
Confidence 578888863
No 494
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=91.31 E-value=0.049 Score=55.89 Aligned_cols=98 Identities=18% Similarity=0.112 Sum_probs=55.0
Q ss_pred cCCCCCCeeEEeecCCcchhHHHHhccCCceEEEeccCCC-CCchhhhh----ccccch--h-hccccCCCCCCCccchh
Q 044932 540 LGIDWSKIRNVMDMKSIYGGFAAALAQQKIWVMNVVPVHA-PDTLPVIY----DRGLVG--I-YHDWCESFGTYPRSYDL 611 (689)
Q Consensus 540 l~~~~~~iRNvmDMna~~GgFAAal~~~~vWVMNvvp~~~-~~tL~vI~----~RGLig--~-yhdwce~f~typrTyDL 611 (689)
+.+..+ ..|+|+++|.|+|++.|.....=--+|+-++- +..+...- ..|+-. + ..|..+.+ ..+.+||+
T Consensus 71 l~~~~~--~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~ 147 (317)
T 1dl5_A 71 VGLDKG--MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFSPYDV 147 (317)
T ss_dssp TTCCTT--CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEE
T ss_pred cCCCCc--CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc-ccCCCeEE
Confidence 344444 47999999999999888653100001222221 22222222 224321 1 12332211 12468999
Q ss_pred hccccccccccCCcCCccceeeeeccccccCcEEEEeCc
Q 044932 612 LHADHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK 650 (689)
Q Consensus 612 lHa~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~ 650 (689)
|.+.+.+.... -++-|+|+|||.++|...
T Consensus 148 Iv~~~~~~~~~----------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 148 IFVTVGVDEVP----------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEECSBBSCCC----------HHHHHHEEEEEEEEEEBC
T ss_pred EEEcCCHHHHH----------HHHHHhcCCCcEEEEEEC
Confidence 99988775432 356789999999999754
No 495
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=91.26 E-value=0.45 Score=50.42 Aligned_cols=104 Identities=13% Similarity=-0.003 Sum_probs=57.4
Q ss_pred CCCeEEEECC------ccchhHHH-hhcC--CeEEEEcCCcccHHHHHHHHHHcCCCcEEecCCCCCCCCCCCCcceEEe
Q 044932 308 NIRVVLEIGS------ADLSFVAS-LLAK--EVLTLTVGLKDDLVDLAQVALERGFPAVVSPLGNRRLPFPSGVFDAIHC 378 (689)
Q Consensus 308 ~~R~VLDVGC------GtGsfaa~-La~~--~V~gmDIsp~D~seamlq~A~eRGL~~i~~~~dt~~LPFpD~SFDlVhc 378 (689)
...+|||+|| -.|++..+ +... -|+++|+.|... ....+...|...+ ...+.||+|++
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s------------da~~~IqGD~~~~-~~~~k~DLVIS 175 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS------------DADSTLIGDCATV-HTANKWDLIIS 175 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC------------SSSEEEESCGGGE-EESSCEEEEEE
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc------------CCCeEEEcccccc-ccCCCCCEEEe
Confidence 4689999996 67775433 3333 478889887532 1112233342222 22478999997
Q ss_pred cc----ccccccc-----cHHHHHHH-HHhccCCCcEEEEEcCCCchhHHHHHHHHHH
Q 044932 379 DG----CSITWHA-----HGGKLLLE-MNRILRPSGYFILSTKHDSIEEEEALTTLTA 426 (689)
Q Consensus 379 s~----cli~W~~-----d~~~aL~E-I~RVLRPGG~fVIsdp~~~le~~~~ie~La~ 426 (689)
-. .-+--.+ ....+..+ +.++|+|||.|++-....--. +.+.++.+
T Consensus 176 DMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~--~~L~~lrk 231 (344)
T 3r24_A 176 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMG 231 (344)
T ss_dssp CCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHT
T ss_pred cCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH--HHHHHHHh
Confidence 31 0000011 12233333 456899999999986543322 23555555
No 496
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=91.18 E-value=0.046 Score=64.76 Aligned_cols=99 Identities=11% Similarity=0.139 Sum_probs=63.4
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhhhc----------ccc--chhhccccCCCCCCCccchhhcc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVIYD----------RGL--VGIYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI~~----------RGL--ig~yhdwce~f~typrTyDLlHa 614 (689)
..|||+++|.|.|+.+|....-..-+|+-++-. .-|...-. .|+ |-+++.=-+.++..+.+||+|.+
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~ 802 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTC 802 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEE
Confidence 469999999999999998764111134444432 22222211 243 33334334456667799999999
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeC
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD 649 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD 649 (689)
..+|..+.+.-. ..++-+|-|+|||| ++||..
T Consensus 803 ~eVLeHL~dp~l--~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 803 LEVIEHMEEDQA--CEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp ESCGGGSCHHHH--HHHHHHHHHTTCCS-EEEEEE
T ss_pred eCchhhCChHHH--HHHHHHHHHHcCCC-EEEEEe
Confidence 999987654221 24677999999999 777753
No 497
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=91.05 E-value=0.13 Score=50.76 Aligned_cols=105 Identities=22% Similarity=0.269 Sum_probs=60.6
Q ss_pred EEeecCCcchhHHHHhccC---CceEEEeccCCC-CCchhhhhcc-----c-cch----hhccccCCCCCCCccchhhcc
Q 044932 549 NVMDMKSIYGGFAAALAQQ---KIWVMNVVPVHA-PDTLPVIYDR-----G-LVG----IYHDWCESFGTYPRSYDLLHA 614 (689)
Q Consensus 549 NvmDMna~~GgFAAal~~~---~vWVMNvvp~~~-~~tL~vI~~R-----G-Lig----~yhdwce~f~typrTyDLlHa 614 (689)
.|+|+++|.|.++++|... .. +|+-++- +..+...-.+ | +.. +..|.++. +.-+.+||+|-+
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~D~v~~ 177 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSVDRAVL 177 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCEEEEEE
T ss_pred EEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCceeEEEE
Confidence 6999999999999988753 22 2444443 2233222222 3 111 12233332 222578998876
Q ss_pred ccccccccCCcCCccceeeeeccccccCcEEEEeC-chhhHHHHHHHHhh-cce
Q 044932 615 DHLFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRD-KVEILDPLEGILRS-LHW 666 (689)
Q Consensus 615 ~~lfs~~~~~c~~~~~illEmDRILRP~G~~iirD-~~~~l~~v~~i~~~-lrW 666 (689)
+.. . ...+|-++-|+|+|||.+++-. ..+-+.++...+.. ..|
T Consensus 178 ~~~--------~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f 222 (280)
T 1i9g_A 178 DML--------A-PWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCW 222 (280)
T ss_dssp ESS--------C-GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSB
T ss_pred CCc--------C-HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCc
Confidence 321 2 2467889999999999988864 34444454444443 444
No 498
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=90.95 E-value=0.038 Score=52.84 Aligned_cols=98 Identities=9% Similarity=0.030 Sum_probs=56.0
Q ss_pred eEEeecCCcchhHHHHhccCCceEEEeccCCCC-Cchhhh----hcccc--chhh-ccccCCCCCCCccchhhccccccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQKIWVMNVVPVHAP-DTLPVI----YDRGL--VGIY-HDWCESFGTYPRSYDLLHADHLFS 619 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~~vWVMNvvp~~~~-~tL~vI----~~RGL--ig~y-hdwce~f~typrTyDLlHa~~lfs 619 (689)
..|+|+.+|.|.++.++.....- .|+-++.. ..+.+. -..|+ |-++ .|..+.++..+.+||+|=++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 46999999999998875544321 34444432 222222 12232 1122 233332344567899998876654
Q ss_pred cccCCcCCccceeeee--ccccccCcEEEEeCchh
Q 044932 620 RLKSRCRQPVSIVVEM--DRILRPGGWAIVRDKVE 652 (689)
Q Consensus 620 ~~~~~c~~~~~illEm--DRILRP~G~~iirD~~~ 652 (689)
. -. ...++-++ -|+|+|||.+++.....
T Consensus 134 ~----~~-~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 134 R----GL-LEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp T----TT-HHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C----Cc-HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 1 11 23445455 45799999999986543
No 499
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=90.83 E-value=0.15 Score=50.82 Aligned_cols=107 Identities=20% Similarity=0.171 Sum_probs=64.9
Q ss_pred eEEeecCCcchhHHHHhccC--CceEEEeccCCC-CCchhhhhcc----cc---c-hhhccccCCCCCCCccchhhcccc
Q 044932 548 RNVMDMKSIYGGFAAALAQQ--KIWVMNVVPVHA-PDTLPVIYDR----GL---V-GIYHDWCESFGTYPRSYDLLHADH 616 (689)
Q Consensus 548 RNvmDMna~~GgFAAal~~~--~vWVMNvvp~~~-~~tL~vI~~R----GL---i-g~yhdwce~f~typrTyDLlHa~~ 616 (689)
..|+|+++|.|.++.+|... +-. +|+-++. +..+.+.-.+ |+ + -+..|..+.|+ +.+||+|-++.
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~V~~~~ 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSG--KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD--EKDVDALFLDV 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTC--EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--CCSEEEEEECC
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc--CCccCEEEECC
Confidence 37999999999999888654 111 3444443 2333333222 33 1 12234444432 35799886531
Q ss_pred ccccccCCcCCccceeeeeccccccCcEEEEeCc-hhhHHHHHHHHhhccee
Q 044932 617 LFSRLKSRCRQPVSIVVEMDRILRPGGWAIVRDK-VEILDPLEGILRSLHWE 667 (689)
Q Consensus 617 lfs~~~~~c~~~~~illEmDRILRP~G~~iirD~-~~~l~~v~~i~~~lrW~ 667 (689)
.+ ...+|-++-|+|+|||.+++-.. .+-+.++...+....|.
T Consensus 190 -------~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 190 -------PD--PWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp -------SC--GGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred -------cC--HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 11 24578889999999999998765 34566666666666665
No 500
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=90.23 E-value=0.12 Score=53.31 Aligned_cols=136 Identities=16% Similarity=0.193 Sum_probs=68.7
Q ss_pred eeEEeecCCcchhHHHHhccC-CceEEEeccCCC-CCchhhhhc------ccc----chhh-ccccCCCCCCCccchhhc
Q 044932 547 IRNVMDMKSIYGGFAAALAQQ-KIWVMNVVPVHA-PDTLPVIYD------RGL----VGIY-HDWCESFGTYPRSYDLLH 613 (689)
Q Consensus 547 iRNvmDMna~~GgFAAal~~~-~vWVMNvvp~~~-~~tL~vI~~------RGL----ig~y-hdwce~f~typrTyDLlH 613 (689)
-++|+|+++|.|+++..|... ++- .|+-++- +.-+.+.-. .|+ |-++ -|-.+-++..+.+||+|-
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVE--SVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 478999999999999999876 332 2222221 111111110 122 1111 111111233468999998
Q ss_pred cccccccccC-CcCCccceeeeeccccccCcEEEEeCc-----hhhHHHHHHHHhhcceeEEEe------ecCCCceEEE
Q 044932 614 ADHLFSRLKS-RCRQPVSIVVEMDRILRPGGWAIVRDK-----VEILDPLEGILRSLHWEIRMT------YAQDKEGILC 681 (689)
Q Consensus 614 a~~lfs~~~~-~c~~~~~illEmDRILRP~G~~iirD~-----~~~l~~v~~i~~~lrW~~~~~------~~~~~E~iL~ 681 (689)
++........ .-. ...++-++-|+|+|||.+++... .+.+..+.+.++.+-=.++.. +..+.-.+++
T Consensus 174 ~d~~~~~~~~~~l~-~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~ 252 (304)
T 2o07_A 174 TDSSDPMGPAESLF-KESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFML 252 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECCCCCCCcchhhh-HHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEE
Confidence 8643221100 000 13456788899999999999752 234444544443332233322 1112235788
Q ss_pred EEec
Q 044932 682 AQKT 685 (689)
Q Consensus 682 ~~K~ 685 (689)
|.|.
T Consensus 253 as~~ 256 (304)
T 2o07_A 253 CSKN 256 (304)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8775
Done!