Query 044934
Match_columns 115
No_of_seqs 113 out of 620
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 14:20:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wql_A Major allergen DAU C 1; 100.0 3.6E-39 1.2E-43 231.1 12.5 108 1-115 1-115 (154)
2 2vjg_A Major allergen DAU C 1; 100.0 6.5E-38 2.2E-42 224.3 12.5 108 1-115 1-115 (154)
3 3ie5_A Phenolic oxidative coup 100.0 2.2E-37 7.6E-42 224.1 12.8 108 1-115 7-121 (165)
4 3rws_A MTN13 protein; zeatin, 100.0 5E-37 1.7E-41 222.8 13.5 109 1-115 6-120 (168)
5 4a8u_A Major pollen allergen B 100.0 1.4E-36 4.9E-41 218.2 13.3 108 2-115 1-115 (159)
6 2flh_A Cytokinin-specific bind 100.0 1.5E-36 5.3E-41 216.8 13.0 108 1-115 1-115 (155)
7 2qim_A PR10.2B; trans-zeatin, 100.0 6E-34 2.1E-38 203.4 13.5 108 1-115 1-115 (158)
8 1e09_A PRU AV 1; allergen, maj 100.0 4.7E-34 1.6E-38 204.2 12.8 108 2-115 1-115 (159)
9 1tw0_A Pathogenesis-related cl 100.0 4E-33 1.4E-37 199.1 15.8 107 2-115 1-114 (157)
10 2vq5_A S-norcoclaurine synthas 100.0 1.5E-33 5.2E-38 209.8 13.6 106 3-115 28-141 (201)
11 1icx_A Protein LLR18A, LLPR10. 100.0 3.3E-33 1.1E-37 199.1 12.6 107 2-115 1-114 (155)
12 2i9y_A Major latex protein-lik 100.0 1.9E-31 6.6E-36 192.2 9.9 105 3-115 16-129 (166)
13 3kl1_A PYL2, putative uncharac 99.9 6.5E-25 2.2E-29 161.9 14.5 100 7-115 38-146 (190)
14 3oqu_A Abscisic acid receptor 99.9 1.1E-24 3.8E-29 162.5 11.8 92 3-101 49-149 (205)
15 3p51_A Uncharacterized protein 99.9 5.2E-24 1.8E-28 152.5 13.8 103 4-115 2-109 (160)
16 3rt2_A Abscisic acid receptor 99.9 5.2E-24 1.8E-28 156.3 11.9 96 6-114 29-135 (183)
17 3jrs_A PYL1, putative uncharac 99.9 1.4E-23 4.8E-28 156.8 10.7 89 7-101 57-153 (208)
18 3f08_A Uncharacterized protein 99.9 7.8E-23 2.7E-27 143.8 13.2 95 5-115 3-102 (146)
19 3oji_A Abscisic acid receptor 99.9 2.7E-22 9.1E-27 148.0 12.4 91 5-101 31-133 (189)
20 3k3k_A Abscisic acid receptor 99.9 1.5E-22 5E-27 151.6 10.5 93 7-111 53-153 (211)
21 3qrz_A Abscisic acid receptor 99.9 1.3E-23 4.4E-28 158.4 -1.7 95 9-115 83-185 (223)
22 2le1_A Uncharacterized protein 99.9 2.8E-20 9.7E-25 129.2 14.5 99 5-115 3-106 (151)
23 1vjh_A BET V I allergen family 99.8 9.5E-20 3.3E-24 125.3 10.9 82 1-115 1-84 (122)
24 3tfz_A Cyclase; helix-GRIP, BE 99.3 1.6E-10 5.5E-15 81.9 13.1 99 3-114 4-108 (172)
25 3tl1_A WHIE ORF VI, polyketide 99.2 4.4E-10 1.5E-14 79.8 12.9 96 4-114 3-106 (159)
26 2d4r_A Hypothetical protein TT 99.2 6.2E-10 2.1E-14 73.8 12.0 93 5-114 3-102 (147)
27 3ijt_A SMU.440, putative uncha 99.2 5.7E-10 1.9E-14 78.8 12.3 95 3-114 17-115 (155)
28 3tvq_A Multifunctional cyclase 99.1 8.5E-10 2.9E-14 79.0 11.9 97 3-114 2-106 (169)
29 1t17_A Conserved hypothetical 98.8 3.8E-08 1.3E-12 67.3 8.9 94 5-114 3-106 (148)
30 3ggn_A Uncharacterized protein 98.7 6.5E-08 2.2E-12 67.2 8.4 95 1-114 1-104 (155)
31 2ns9_A Hypothetical protein AP 98.7 3.7E-07 1.3E-11 62.1 11.2 96 5-114 14-115 (157)
32 2pcs_A Conserved protein; stru 98.7 5.2E-07 1.8E-11 62.1 11.6 98 5-114 4-107 (162)
33 1xn6_A Hypothetical protein BC 98.4 1E-06 3.5E-11 59.6 6.9 87 4-114 8-97 (143)
34 3p9v_A Uncharacterized protein 98.3 4.6E-06 1.6E-10 58.3 9.7 95 4-114 7-110 (161)
35 1z94_A Conserved hypothetical 98.2 3.6E-05 1.2E-09 51.4 11.2 99 4-114 3-110 (147)
36 3q6a_A Uncharacterized protein 98.1 2.7E-05 9.4E-10 52.2 9.9 84 5-114 2-90 (135)
37 2leq_A Uncharacterized protein 98.1 4.1E-05 1.4E-09 50.8 10.1 90 4-101 5-103 (146)
38 2lcg_A Uncharacterized protein 98.1 5.3E-05 1.8E-09 51.1 10.6 90 5-114 2-101 (142)
39 2il5_A Hypothetical protein; s 98.1 6.1E-05 2.1E-09 52.2 11.0 99 4-114 14-120 (171)
40 1xuv_A Hypothetical protein MM 98.1 0.0001 3.5E-09 51.8 12.2 100 4-114 22-130 (178)
41 1xn5_A BH1534 unknown conserve 97.9 5.4E-05 1.8E-09 51.5 8.4 81 3-101 4-87 (146)
42 2ldk_A Uncharacterized protein 97.9 0.00027 9.1E-09 49.1 12.0 101 4-114 12-123 (172)
43 3pu2_A Uncharacterized protein 97.9 0.00036 1.2E-08 48.6 12.2 99 3-114 12-119 (164)
44 2lak_A AHSA1-like protein RHE_ 97.8 1.9E-05 6.6E-10 54.4 4.9 96 3-114 8-107 (160)
45 3rd6_A MLL3558 protein; struct 97.8 0.00031 1.1E-08 48.6 11.1 98 3-114 7-116 (161)
46 2kew_A Uncharacterized protein 97.8 1.4E-05 4.9E-10 54.9 4.1 80 4-101 10-92 (152)
47 2lgh_A Uncharacterized protein 97.8 0.00025 8.5E-09 48.2 10.2 90 5-114 2-102 (144)
48 3put_A Hypothetical conserved 97.8 0.0003 1E-08 49.1 10.4 100 3-114 8-117 (166)
49 2lf2_A Uncharacterized protein 97.8 0.00043 1.5E-08 48.5 11.2 100 4-114 16-127 (175)
50 2l8o_A Uncharacterized protein 97.8 0.00018 6.1E-09 48.9 8.9 85 5-101 3-97 (144)
51 3eli_A AHSA1, AHA1 domain prot 97.8 0.00019 6.5E-09 49.0 8.8 94 5-101 3-106 (152)
52 3q63_A MLL2253 protein; struct 97.7 0.00021 7.3E-09 49.0 8.7 88 2-101 7-100 (151)
53 2l9p_A Uncharacterized protein 97.7 0.00029 1E-08 48.7 8.9 93 4-101 8-112 (164)
54 3uid_A Putative uncharacterize 97.7 0.00063 2.2E-08 47.7 10.6 100 4-114 13-124 (168)
55 3q64_A MLL3774 protein; struct 97.6 0.00032 1.1E-08 48.5 8.3 97 4-114 9-117 (162)
56 1xfs_A NC_840354, conserved hy 97.6 0.00045 1.6E-08 48.2 9.1 72 4-79 10-90 (178)
57 2nn5_A Hypothetical protein EF 97.6 0.00059 2E-08 48.7 9.5 85 4-114 36-124 (184)
58 4fpw_A CALU16; structural geno 97.3 0.0013 4.4E-08 47.1 8.8 89 4-114 21-109 (181)
59 1x53_A Activator of 90 kDa hea 97.3 0.00077 2.6E-08 45.5 6.8 90 1-101 8-98 (145)
60 2k5g_A Uncharacterized protein 97.3 0.001 3.4E-08 47.5 7.7 87 1-101 16-123 (191)
61 3ni8_A PFC0360W protein; heat 97.2 0.0013 4.5E-08 45.8 7.5 95 4-114 19-114 (158)
62 2luz_A CALU16; structural geno 97.0 0.011 3.7E-07 42.7 10.9 88 5-114 33-120 (192)
63 2qpv_A Uncharacterized protein 97.0 0.0049 1.7E-07 43.2 8.5 35 5-42 28-62 (156)
64 3oh8_A Nucleoside-diphosphate 96.8 0.0028 9.5E-08 51.2 6.9 96 5-114 2-105 (516)
65 1zxf_A CALC; SELF-sacrificing 95.6 0.031 1.1E-06 38.2 6.1 29 4-36 4-32 (155)
66 2lio_A Uncharacterized protein 95.2 0.058 2E-06 37.0 6.4 71 1-81 1-74 (136)
67 3qsz_A STAR-related lipid tran 94.5 0.77 2.6E-05 31.7 13.1 43 4-49 27-69 (189)
68 1ln1_A PC-TP, phosphatidylchol 94.3 0.91 3.1E-05 31.8 11.1 50 4-58 52-102 (214)
69 2ffs_A Hypothetical protein PA 94.3 0.68 2.3E-05 32.6 10.1 61 5-68 2-74 (157)
70 3fo5_A Thioesterase, adipose a 86.0 1.5 5.2E-05 32.8 5.6 41 4-47 88-128 (258)
71 3p0l_A Steroidogenic acute reg 82.6 2.3 7.8E-05 30.2 5.2 40 6-47 57-96 (221)
72 1jss_A Stard4, cholesterol-reg 69.7 7 0.00024 27.8 4.7 39 6-47 69-107 (224)
73 1em2_A MLN64 protein; beta bar 66.1 7.4 0.00025 27.6 4.2 39 7-47 69-107 (229)
74 2r55_A STAR-related lipid tran 52.8 17 0.00059 25.5 4.2 40 6-47 69-109 (231)
75 2e3n_A Lipid-transfer protein 47.8 25 0.00086 25.2 4.5 46 9-58 78-125 (255)
76 3ost_A Serine/threonine-protei 37.7 85 0.0029 21.2 5.5 66 6-101 25-90 (128)
77 2pso_A STAR-related lipid tran 37.1 1.1E+02 0.0038 21.7 11.3 98 5-114 76-190 (237)
78 2ejx_A ST0812; arcaea, unknown 34.2 21 0.00071 24.6 2.0 37 5-43 6-42 (139)
No 1
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=100.00 E-value=3.6e-39 Score=231.15 Aligned_cols=108 Identities=24% Similarity=0.457 Sum_probs=102.4
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCcc
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNL 73 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~ 73 (115)
||+.+++.|+++++||+|+|++|++|+|+|+|||+|++++|++ +||||++||||+|| .++||||+++|++||
T Consensus 1 mgv~~~~~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~-veGdg~~Gsir~~t~~~g~~~~~~kErle~iD~~~~ 79 (154)
T 2wql_A 1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVE-VKGDGGAGTVRIITLPEGSPITTMTVRTDAVNKEAL 79 (154)
T ss_dssp --CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEE-EESSSSTTCEEEEECCTTCSCCEEEEEEEEEETTTT
T ss_pred CCCeEEEEEEEecCCHHHHHHHHhhcccccchhhcccceeEEE-EECCCCCCeEEEEEEcCCCCceEEEEEEEEEehhhC
Confidence 9999999999999999999999899999999999999999999 68999999999999 589999999999999
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
+++|+++|||++..+|++|+++++++|+ ++|||++|
T Consensus 80 ~~~y~iieGd~l~~~~~~~~~~ikv~p~------~~ggsvvk 115 (154)
T 2wql_A 80 SYDSTVIDGDILLGFIESIETHMVVVPT------ADGGSITK 115 (154)
T ss_dssp EEEEEEEESGGGTTTEEEEEEEEEEEEC------TTSCEEEE
T ss_pred EEEEEEEeccccccceEEEEEEEEEeeC------CCCcEEEE
Confidence 9999999999988999999999999999 89999985
No 2
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=100.00 E-value=6.5e-38 Score=224.33 Aligned_cols=108 Identities=24% Similarity=0.459 Sum_probs=101.6
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCcc
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNL 73 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~ 73 (115)
||+++++.|++|++||+++|++|++|+++|+|+|+|+.|+++++ ||||++||||+|| .++||||+++|++||
T Consensus 1 mg~~~~~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~~~~~~kErl~~iD~~~~ 79 (154)
T 2vjg_A 1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGSPITTMTVRTDAVNKEAL 79 (154)
T ss_dssp --CCEEEEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTCSCCEEEEEEEEEETTTT
T ss_pred CCceEEEEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCCCceEEEEEecCCCCceEEEEEEEEEeccCC
Confidence 99999999999999999999998899999889999999999999 9999999999999 389999999999999
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
+++|+++|||++.+.|++|+++++|.|. ++|||+|+
T Consensus 80 ~~~y~iiegd~l~~~~~~~~~ti~v~p~------~~ggs~v~ 115 (154)
T 2vjg_A 80 SYDSTVIDGDILLGFIESIETHMVVVPT------ADGGSITK 115 (154)
T ss_dssp EEEEEEEESGGGTTTEEEEEEEEEEEEC------TTSCEEEE
T ss_pred EEEEEEEecCCCccceEEEEEEEEEEEC------CCCcEEEE
Confidence 9999999999987789999999999999 88899875
No 3
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=100.00 E-value=2.2e-37 Score=224.13 Aligned_cols=108 Identities=34% Similarity=0.599 Sum_probs=103.0
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCcc
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNL 73 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~ 73 (115)
||+++++.|++|++||+++|++|++|+++|+|+|+|+.|++++++||||++||||+|+ +++||||+++|++||
T Consensus 7 Mg~~~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg~~Gsir~~~~~~g~~~~~~kErl~~iD~~~~ 86 (165)
T 3ie5_A 7 MAAYTIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDGGVGTVTKITFVDGHPLTYMLHKFDEIDAANF 86 (165)
T ss_dssp CSCEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECTTSSCCEEEEEEEEEEGGGT
T ss_pred eeeEEEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCCCCCeEEEEEecCCCCCceEEEEEEEEchhcC
Confidence 9999999999999999999999889999988999999999999999999999999999 389999999999999
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
+++|+++||+++.++|++|+++++|+ . ++|||+|+
T Consensus 87 ~~~Y~iieG~~l~~~~~~y~~~i~v~-~------~~ggs~vk 121 (165)
T 3ie5_A 87 YCKYTLFEGDVLRDNIEKVVYEVKLE-A------VGGGSKGK 121 (165)
T ss_dssp EEEEEEEEEGGGTTTEEEEEEEEEEE-E------ETTEEEEE
T ss_pred EEEEEEecCCCCccceEEEEEEEEEE-e------CCCceEEE
Confidence 99999999999877999999999999 5 68899875
No 4
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=100.00 E-value=5e-37 Score=222.83 Aligned_cols=109 Identities=29% Similarity=0.553 Sum_probs=104.2
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----eeeeEEEeeecCCccEE
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----TSMQSRVDALDRDNLYC 75 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~~~kEri~~vDe~~~~~ 75 (115)
||+.+++.|++|++||+|+|++|++|+++|+|+|+|+.|++|+++||||++||||+|+ +++||||+++|++||++
T Consensus 6 mg~~~~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~g~~~~~kErl~~iD~~~~~~ 85 (168)
T 3rws_A 6 MGVITSESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGGPGTIKKLTFVGDFGSTKQHIDMVDRENCAY 85 (168)
T ss_dssp CCEEEEEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSSTTCEEEEEESSSSCEEEEEEEEEETTTTEE
T ss_pred cceEEEEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCCCCeEEEEEEcCCCeEEEEEEEEEcccCCEE
Confidence 9999999999999999999999779999988999999999999999999999999999 58999999999999999
Q ss_pred EEEEEecCccCc-ceEEEEEEEEEEecccccccCCCceeeC
Q 044934 76 KYTVFEEDCISD-ILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 76 ~y~vieG~~l~~-~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
+|+++|||++.. +|++|+++++|+|. ++|||+|+
T Consensus 86 sY~iiegd~l~~~p~~~y~~ti~v~p~------~~ggs~v~ 120 (168)
T 3rws_A 86 TYSVYEGIALSDQPLEKIVFEFKLVPT------PEEGCIVK 120 (168)
T ss_dssp EEEECSSCCBTTBCEEEEEEEEEEEEC------TTSCEEEE
T ss_pred EEEEEccCcccCcCceEEEEEEEEEEC------CCCceEEE
Confidence 999999999877 49999999999998 88899875
No 5
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=100.00 E-value=1.4e-36 Score=218.20 Aligned_cols=108 Identities=35% Similarity=0.621 Sum_probs=103.0
Q ss_pred ccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 2 GVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 2 ~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
|+.+++.|++|++||+|+|++|++|+++|+|+|+|++|++|+++||||++||||+|| .++||||+++|++||+
T Consensus 1 ~~~~~~~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg~Gsir~~~~~~g~~~~~~kErl~~iD~~~~~ 80 (159)
T 4a8u_A 1 GVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFK 80 (159)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSSTTCEEEEECCTTSSCSEEEEEEEEEETTTTE
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCCCceEEEEEEecCCCccEEEEEEEEEccccCE
Confidence 789999999999999999999669999988999999999999999999999999999 3899999999999999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
++|+++|||++.++|++|+++++|+|. ++|||+|+
T Consensus 81 ~~y~iiegd~l~~~~~~y~~ti~v~p~------~~ggs~v~ 115 (159)
T 4a8u_A 81 YSYSVIEGGPVGDTLEKISNEIKIVAT------PNGGSILK 115 (159)
T ss_dssp EEEEEEEETTCBTTEEEEEEEEEEEEC------TTSCEEEE
T ss_pred EEEEEeeCCCCccceEEEEEEEEEEEC------CCCceEEE
Confidence 999999999987889999999999998 88899875
No 6
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=100.00 E-value=1.5e-36 Score=216.82 Aligned_cols=108 Identities=19% Similarity=0.294 Sum_probs=103.5
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---e----eeeEEEeeecCCcc
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---T----SMQSRVDALDRDNL 73 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~----~~kEri~~vDe~~~ 73 (115)
|| ++++.|+++++||+++|++|++|+++|+|+|+|+.+++|+++||||++||||.|+ + ++||||+.+|++|+
T Consensus 1 M~-~~~~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~g~~~~~~kErl~~iD~~~~ 79 (155)
T 2flh_A 1 MV-KEFNTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGGVGTILIFNFLPEVSPSYQREEITEFDESSH 79 (155)
T ss_dssp CC-EEEEEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSSTTCEEEEEECTTSSSCEEEEEEEEEETTTT
T ss_pred CC-cEEEEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCCCCeEEEEEeeCCCCCcEEEEEEEEEeCCCC
Confidence 99 9999999999999999999889999988999999999999999999999999999 4 89999999999999
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
+++|+++||+++..+|++|+++++|+|. ++|||+|+
T Consensus 80 ~~~y~iieg~~l~~~~~~~~~~i~v~p~------~~ggs~v~ 115 (155)
T 2flh_A 80 EIGLQVIEGGYLSQGLSYYKTTFKLSEI------EEDKTLVN 115 (155)
T ss_dssp EEEEEEEEEGGGGTTCSEEEEEEEEEEE------ETTEEEEE
T ss_pred EEEEEEEeccccccCceEEEEEEEEEEC------CCCCEEEE
Confidence 9999999999887899999999999999 88899875
No 7
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=100.00 E-value=6e-34 Score=203.42 Aligned_cols=108 Identities=27% Similarity=0.497 Sum_probs=100.2
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCcc
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNL 73 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~ 73 (115)
||+++++.+++|++||+++|++|..|+++++|+|+ +.|++|+++||||++||||.|+ .++||||+++|++|+
T Consensus 1 M~~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~-~~i~s~~i~eGdgg~Gsir~~~~~~g~~~~~~kErl~~~D~~~~ 79 (158)
T 2qim_A 1 MGVFTFQDEYTSTIAPAKLYKALVTDADIIIPKAV-ETIQSVEIVEGNGGPGTIKKLTFIEGGESKYVLHKIEAIDEANL 79 (158)
T ss_dssp -CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHC-TTEEEEEEEESSSSTTCEEEEEEEETTEEEEEEEEEEEEEGGGT
T ss_pred CCCEEEEEEEEecCCHHHHHHHHhcCccchhhhHH-hhCcEEEEEecCCCCCeEEEEEEcCCCcceeEEEEEEEEecCCC
Confidence 99999999999999999999996349998889999 5899999999999999999999 379999999999999
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
+++|+++|||++.+.|++|+++++|+|. ++|||+|+
T Consensus 80 ~~~y~iieG~~~~~~~~~~~~~~~v~~~------~~~gs~v~ 115 (158)
T 2qim_A 80 GYNYSIVGGVGLPDTIEKISFETKLVEG------ANGGSIGK 115 (158)
T ss_dssp EEEEEEEEESSCCCSEEEEEEEEEEEEC------STTCEEEE
T ss_pred EEEEEEEeccCCccceEEEEEEEEEEec------CCCCEEEE
Confidence 9999999999886689999999999999 88889875
No 8
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=100.00 E-value=4.7e-34 Score=204.18 Aligned_cols=108 Identities=32% Similarity=0.619 Sum_probs=101.4
Q ss_pred ccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 2 GVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 2 ~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
|+++++.+++|++||+++|++|.+|+++++|+|+|+.|++|+++||||++||||.|+ .++||||+.+|++|++
T Consensus 1 ~~~~~~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~G~~~~~~kErl~~~D~~~~~ 80 (159)
T 1e09_A 1 GVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYS 80 (159)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSSTTCEEEEEECCSSSCEEEEEEEEEEETTTTE
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCCCceEEEEEecCCCCceEEEEEEEEEcCCCCE
Confidence 789999999999999999999644999888999999999999999999999999999 4799999999999999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
++|+++|||++..+|++|+++++|.|. ++|||+|+
T Consensus 81 ~~y~iieG~~~~~~~~~~~~~~~v~~~------~~~gs~v~ 115 (159)
T 1e09_A 81 YSYTLIEGDALGDTLEKISYETKLVAS------PSGGSIIK 115 (159)
T ss_dssp EEEEECCCTTTGGGEEEEEEEEEECCC------TTSSEEEE
T ss_pred EEEEEEecccCcccceEEEEEEEEEec------CCCCEEEE
Confidence 999999999986799999999999998 78899875
No 9
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=100.00 E-value=4e-33 Score=199.14 Aligned_cols=107 Identities=29% Similarity=0.473 Sum_probs=99.8
Q ss_pred ccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 2 GVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 2 ~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
|+++++.|++|++||+++|++|..|+++++|+|+ +.|++|+++||||++||||.|+ .++||||+++|++|++
T Consensus 1 ~~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~-~~i~s~~i~eG~g~~Gsir~~~~~~G~~~~~~kErl~~~D~~~~~ 79 (157)
T 1tw0_A 1 GVFVFRDETSSSVAPAKLYKALTKDSDTIAQKID-GPIQSIELVEGNGGVGTIKKITANEGDKTSFVLQKVDAIDEANLG 79 (157)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHHHTGGGGGGGSC-SSEEEEEEEESSSSTTCEEEEEEEETTEEEEEEEEEEEEETTTTE
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCcchhhhhHH-hhccEEEEEeCCCCCCeEEEEEeeCCCccceEEEEEEEEeccCCE
Confidence 7899999999999999999996449999899999 5899999999999999999999 3899999999999999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
++|+++|||++.+.|++|+++++|+|. ++|||+|+
T Consensus 80 ~~y~iieGd~~~~~~~~~~~~~~v~~~------~~~gs~v~ 114 (157)
T 1tw0_A 80 YDYSIVGGTGLPESLEKLSFETKVVAG------SGGGSISK 114 (157)
T ss_dssp EEEEEEECTTSCTTEEEEEEEEEEEEC------SSSSEEEE
T ss_pred EEEEEEecCCCccceEEEEEEEEEEec------CCCCEEEE
Confidence 999999999886689999999999998 78889875
No 10
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=100.00 E-value=1.5e-33 Score=209.79 Aligned_cols=106 Identities=21% Similarity=0.317 Sum_probs=100.3
Q ss_pred cEEEEEEEEeccCHHHHHHHHhc-ccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVI-DSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~-d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
.++++.+++|++||+++|++|++ |+++|+|+|+|+.++||+++ |||++||||.|+ .++||||+++|++|++
T Consensus 28 ~g~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg~GsIR~lt~~~G~~~~~vkErle~iDde~~~ 106 (201)
T 2vq5_A 28 TKVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGGVGTILDMTFVPGEFPHEYKEKFILVDNEHRL 106 (201)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSSTTCEEEEECCTTCSSCEEEEEEEEEETTTTE
T ss_pred ceEEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCCCCeEEEEEecCCCcccEEEEEEEEEchhhCE
Confidence 46889999999999999999878 99998999999999999999 999999999999 3899999999999999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
++|+++|||++..+|++|+++++|+|. ++|||+|+
T Consensus 107 ~sYsiieGd~l~~~~~~y~~tikv~p~------~dggs~vk 141 (201)
T 2vq5_A 107 KKVQMIEGGYLDLGVTYYMDTIHVVPT------GKDSCVIK 141 (201)
T ss_dssp EEEEEEEEGGGGTTEEEEEEEEEEEEE------ETTEEEEE
T ss_pred EEEEEEecCccccceeEEEEEEEEEEC------CCCCeEEE
Confidence 999999999987899999999999999 88899875
No 11
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=100.00 E-value=3.3e-33 Score=199.08 Aligned_cols=107 Identities=26% Similarity=0.535 Sum_probs=99.6
Q ss_pred ccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 2 GVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 2 ~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
|+++++.+++|++||+++|++|..|+++++|+|+ +.|++|+++||||++||||.|+ .++|||++++|++|++
T Consensus 1 ~~~~~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~-~~i~s~~i~eG~g~~Gsir~~~~~~G~~~~~~kErl~~~D~~~~~ 79 (155)
T 1icx_A 1 GIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLT 79 (155)
T ss_dssp CEEEEEEEEEESSCHHHHHHHHTTTHHHHHHHHS-TTEEEEEEEESSSSTTCEEEEEEESSSSEEEEEEEEEEEEGGGTE
T ss_pred CcEEEEEEEEecCCHHHHHHHHhcCcchhcchhh-hhccEEEEEecCCCCCeEEEEEEecCCcceeEEEEEEEEeccCCE
Confidence 7899999999999999999996449998889999 5899999999999999999999 3899999999999999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
++|+++|||++.+.|++|+++++|+|. ++|||+|+
T Consensus 80 ~~y~iieGd~~~~~~~~~~~~~~v~~~------~~~gs~v~ 114 (155)
T 1icx_A 80 YNYSIIGGEGLDESLEKISYESKILPG------PDGGSIGK 114 (155)
T ss_dssp EEEEEEEETTSCTTEEEEEEEEEEEEC------GGGCEEEE
T ss_pred EEEEEEecCCCccceEEEEEEEEEEec------CCCCEEEE
Confidence 999999999886689999999999998 77889875
No 12
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.97 E-value=1.9e-31 Score=192.21 Aligned_cols=105 Identities=20% Similarity=0.366 Sum_probs=96.8
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecC-CccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGY-GEVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGd-g~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
.++++.+++|+|||+++|++|+.|++. +|+|+|+.|++|+++||| |++||||.|+ .++||||+++|++|++
T Consensus 16 ~~k~~~ev~i~apa~kvw~~~~~d~~~-lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg~~~~~kErl~~iD~~~~~ 94 (166)
T 2i9y_A 16 VGKLETDVEIKASADKFHHMFAGKPHH-VSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNL 94 (166)
T ss_dssp EEEEEEEEEESSCHHHHHGGGSSCSSC-CCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETTEEEEEEEEEEEEETTTTE
T ss_pred ccEEEEEEEecCCHHHHHHHHhccccc-ccccccccceEEEEEcCCCCCCCeEEEEEEecCCCceEEEEEEEEEeccCcE
Confidence 378999999999999999998778776 599999999999999999 8999999999 3899999999999999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCC-ceeeC
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNA-SCLMK 115 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~g-g~~vk 115 (115)
++|+++|||++ ++|++|+++++|.|. ++| ||+|+
T Consensus 95 ~~y~iieGd~~-~~~~~~~~ti~v~p~------~~g~gs~v~ 129 (166)
T 2i9y_A 95 ITFRVIEGDLM-KEYKSFLLTIQVTPK------PGGPGSIVH 129 (166)
T ss_dssp EEEEECCTTGG-GTEEEEEEEEEEEEE------EETTEEEEE
T ss_pred EEEEEEeCCCC-CCeeEEEEEEEEEEC------CCCCCcEEE
Confidence 99999999985 899999999999998 665 89875
No 13
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=99.93 E-value=6.5e-25 Score=161.89 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=87.8
Q ss_pred EEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccEEEEEE
Q 044934 7 DKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLYCKYTV 79 (115)
Q Consensus 7 ~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~~~y~v 79 (115)
....+|++||+++|++ ++|+++ |++.|+.|++|+++||||++||||.|+ .++||||+.+|++||+|+|++
T Consensus 38 ~~~~~I~Apa~~vW~l-v~df~~--~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~G~p~~~vkErL~~iD~~~~~~sY~i 114 (190)
T 3kl1_A 38 LITQRIHAPASVVWPL-IRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRV 114 (190)
T ss_dssp EEEEEESSCHHHHHHH-HHCTTC--GGGTCSSEEEEEEEESSSSTTCEEEEEECSSSSCEEEEEEEEEEETTTTEEEEEE
T ss_pred EEEEEecCCHHHHHHH-HhCCCC--hhHcccccCEEEEEcCCCCCCeEEEEEecCCCccceEEEEEEEEeccCCEEEEEE
Confidence 3345899999999999 699998 666666899999999999999999999 489999999999999999999
Q ss_pred EecCccCcceEEEEEEEEEEe--cccccccCCCceeeC
Q 044934 80 FEEDCISDILELIVFQIKFGP--YKLKKISSNASCLMK 115 (115)
Q Consensus 80 ieG~~l~~~~~s~~~~i~v~p--~~~~~~~~~gg~~vk 115 (115)
+||+++...|+++...++++| . +++||+|+
T Consensus 115 ieG~~~~~~Y~s~~~v~~~~~~~~------~~~gt~V~ 146 (190)
T 3kl1_A 115 VGGEHRLKNYKSVTSVNEFLNQDS------GKVYTVVL 146 (190)
T ss_dssp EEESSSCCSCEEEEEEEEEEC-CC------CCEEEEEE
T ss_pred EecCCccccEEEEEEEEecccccC------CCCcEEEE
Confidence 999986689999999888887 4 45688874
No 14
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=99.92 E-value=1.1e-24 Score=162.49 Aligned_cols=92 Identities=17% Similarity=0.149 Sum_probs=85.0
Q ss_pred cEEEEEEE--EeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCcc
Q 044934 3 VLRFDKDG--SVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNL 73 (115)
Q Consensus 3 ~~~~~~ei--~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~ 73 (115)
..+++.++ +|+|||+++|++ ++||+++ |+|+| .|++|++ +|||++|+||.|+ .+++|||+++|+++|
T Consensus 49 ~~k~~~~V~~~I~ApadkVW~l-V~Df~~l-~kW~P-~V~s~ev-eGdg~vGsVR~vt~~~G~p~~~vkErL~~lDde~~ 124 (205)
T 3oqu_A 49 ENQCTSALVKHIKAPLHLVWSL-VRRFDQP-QKYKP-FVSRCTV-IGDPEIGSLREVNVKSGLPATTSTERLELLDDEEH 124 (205)
T ss_dssp TTEEEEEEEEEESSCHHHHHHH-HTCTTCG-GGTCT-TEEEEEC-CSSCCTTCEEEEEECTTSSCSEEEEEEEEEETTTT
T ss_pred CcEEEEEEeeEEcCCHHHHHHH-HhCcCCh-hHcCc-cceEEEe-eCCCCCCcEEEEEEcCCCccceEEEEEEEEECCCC
Confidence 46788999 999999999999 7999995 89999 7999985 8999999999999 489999999999999
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEec
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~ 101 (115)
+|+|+++||++ +|++|+++++|.|.
T Consensus 125 ~~sYsIieG~l---pv~~Y~ati~V~p~ 149 (205)
T 3oqu_A 125 ILGIKIIGGDH---RLKNYSSILTVHPE 149 (205)
T ss_dssp EEEEEEEEESS---SCTTCEEEEEEEEE
T ss_pred EEEEEEEecCc---ceeEEEEEEEEEEc
Confidence 99999999975 49999999999998
No 15
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.92 E-value=5.2e-24 Score=152.49 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=91.1
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCC--ccccEEEEceeeeEEEeeecCCccEEEEEEEe
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYG--EVGSIEVVSTSMQSRVDALDRDNLYCKYTVFE 81 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg--~~Gsir~~t~~~kEri~~vDe~~~~~~y~vie 81 (115)
.+++.+++|+|||+++|++ +.|++++ +|+|..++++++++|+| ++|+||.+.++++|||+++|+++++++|++++
T Consensus 2 ~~v~~si~I~Ap~~~VW~~-v~Df~~~--~w~P~v~~s~e~~eg~~~~~vGsvR~~gg~v~Erl~~~D~~~~~~sY~ii~ 78 (160)
T 3p51_A 2 PKVYNSIVVDAPVERVWSR-IRNFHDF--SWAPSLIKSCKKVGGGGGYSVGARRLLNGEFLDTLIAYSEIERRIMYSMDE 78 (160)
T ss_dssp CEEEEEEEESSCHHHHHHH-HCCTTCC--TTCTTTCCCEEEESSCCTTCTTCEEEETTTEEEEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEEEECCCHHHHHHH-HhCcCCC--eEccCceEEEEEEecCCCCCCCCEEEECCEEEEEEEEEcCCCcEEEEEEec
Confidence 3578999999999999999 6999995 99999888889999975 89999999888999999999999999999999
Q ss_pred cCcc--CcceEEEEEEEEEEecccccccC-CCceeeC
Q 044934 82 EDCI--SDILELIVFQIKFGPYKLKKISS-NASCLMK 115 (115)
Q Consensus 82 G~~l--~~~~~s~~~~i~v~p~~~~~~~~-~gg~~vk 115 (115)
|++. +..|++|.++++|+|. + +|||+|+
T Consensus 79 g~l~~~~~~~~~y~~~~~v~p~------~~~ggt~V~ 109 (160)
T 3p51_A 79 GPSPVSSGEIYNYVGNLHLLPV------TIDDTTFVE 109 (160)
T ss_dssp CSTTSSTTTEEEEEEEEEEEEE------TTTTEEEEE
T ss_pred CCCcccccceeEEEEEEEEEEe------cCCCCEEEE
Confidence 9642 0239999999999998 6 6789874
No 16
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=99.91 E-value=5.2e-24 Score=156.31 Aligned_cols=96 Identities=19% Similarity=0.136 Sum_probs=85.3
Q ss_pred EEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEec-CCccccEEEEc-------eeeeEEEeeecCCccEEEE
Q 044934 6 FDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG-YGEVGSIEVVS-------TSMQSRVDALDRDNLYCKY 77 (115)
Q Consensus 6 ~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG-dg~~Gsir~~t-------~~~kEri~~vDe~~~~~~y 77 (115)
.....+|+|||+++|++ ++||+++ |+|+| .|+++ .++| ||++|+||.|+ .+++|||+++|+++|+++|
T Consensus 29 ~~v~~~I~Apa~~VW~~-v~df~~l-~~w~P-~V~s~-~~eG~~ggvGsvR~lt~~~G~p~~~vkErL~~~D~~~~~~sY 104 (183)
T 3rt2_A 29 STLVKHIKAPLHLVWSI-VRRFDEP-QKYKP-FISRC-VVQGKKLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGI 104 (183)
T ss_dssp EEEEEEESSCHHHHHHH-HTCTTCG-GGTCT-TEEEE-EESSSCCCTTCEEEEEECCSSTTCEEEEEEEEEETTTTEEEE
T ss_pred EEEEEEEeCCHHHHHHH-HhCcCch-hhcCc-cceEE-EeeCCCCCCCcEEEEEeCCCCccceEEEEEEEEECCCCEEEE
Confidence 44456899999999999 6999995 99999 69999 6899 78999999998 3899999999999999999
Q ss_pred EEEecCccCcceEEEEEEEEEEecccccccC-CC--ceee
Q 044934 78 TVFEEDCISDILELIVFQIKFGPYKLKKISS-NA--SCLM 114 (115)
Q Consensus 78 ~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~-~g--g~~v 114 (115)
+++||++ +|++|+++++|.|. + +| ||+|
T Consensus 105 ~Iieg~l---p~~~y~ati~v~p~------~~dG~~gt~V 135 (183)
T 3rt2_A 105 RIVGGDH---RLKNYSSTISLHSE------TIDGKTGTLA 135 (183)
T ss_dssp EEEEESC---SCTTCEEEEEEEEE------EETTEEEEEE
T ss_pred EEecCCc---ceeEEEEEEEEEEe------cCCCCCCEEE
Confidence 9999975 49999999999998 6 66 5876
No 17
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=99.90 E-value=1.4e-23 Score=156.82 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=80.2
Q ss_pred EEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecC-CccccEEEEc-------eeeeEEEeeecCCccEEEEE
Q 044934 7 DKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGY-GEVGSIEVVS-------TSMQSRVDALDRDNLYCKYT 78 (115)
Q Consensus 7 ~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGd-g~~Gsir~~t-------~~~kEri~~vDe~~~~~~y~ 78 (115)
....+|+|||+++|++ ++||+++ |+|+| .|++|++++|| |++|+||.|+ .+++|||+++|+++|+|+|+
T Consensus 57 ~v~~~I~ApadkVW~l-v~Df~~l-~~w~p-~V~s~e~~eGd~g~vGsVR~lt~~~G~p~~~vkErL~~lDde~~~~sYs 133 (208)
T 3jrs_A 57 LLAQRIHAPPETVWSV-VRRFDRP-QIYKH-FIKSCNVSEDFEMRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFS 133 (208)
T ss_dssp EEEEEESSCHHHHHHH-HTCTTCG-GGTCT-TEEEEECCTTCCCSTTCEEEEEECTTSSCCEEEEEEEEEETTTTEEEEE
T ss_pred EEEEEEeCCHHHHHHH-HhCcCCh-hHccc-cceEEEEecCCCCCCCeEEEEEecCCCccceEEEEEEEEeccCCEEEEE
Confidence 3455899999999999 6999995 99999 79999999997 5999999998 58999999999999999999
Q ss_pred EEecCccCcceEEEEEEEEEEec
Q 044934 79 VFEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 79 vieG~~l~~~~~s~~~~i~v~p~ 101 (115)
++||++ ++++|+++++|.|.
T Consensus 134 IieG~l---pv~~Y~sti~V~p~ 153 (208)
T 3jrs_A 134 ITGGEH---RLRNYKSVTTVHRF 153 (208)
T ss_dssp EEESSS---SCTTCEEEEEEEEE
T ss_pred EeeCCc---ceeeEEEEEEEEEc
Confidence 999985 36777889999996
No 18
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.90 E-value=7.8e-23 Score=143.80 Aligned_cols=95 Identities=13% Similarity=0.294 Sum_probs=86.2
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc----eeeeEEEeeecCCccEEEEEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS----TSMQSRVDALDRDNLYCKYTVF 80 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t----~~~kEri~~vDe~~~~~~y~vi 80 (115)
+++.+++|+|||+++|++ +.|++++ |+|+| .++++++++| |++|.|+ ..++|||+++|+++++++|+++
T Consensus 3 ~v~~si~I~Ap~~~VW~~-l~d~~~~-~~w~p-~v~~~~~~~G----G~vR~~~~~~G~~~~Erl~~~D~~~~~~~y~iv 75 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQL-IGGFNSL-PDWLP-YIPSSKLTEG----GRVRHLANPDGETIIERLEVFNDKERYYTYSIM 75 (146)
T ss_dssp EEEEEEEESSCHHHHHHH-HCSTTCH-HHHCT-TCCEEEEEGG----GTEEEEECTTSCEEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEEEeCCHHHHHHH-HhccccH-HHhCC-CeEEEEEeCC----CeEEEEEeCCCCEEEEEEEEEeCCCCEEEEEEe
Confidence 588999999999999998 6999996 99999 5999999876 9999998 6899999999999999999999
Q ss_pred ecCccCcceEEEEEEEEEEe-cccccccCCCceeeC
Q 044934 81 EEDCISDILELIVFQIKFGP-YKLKKISSNASCLMK 115 (115)
Q Consensus 81 eG~~l~~~~~s~~~~i~v~p-~~~~~~~~~gg~~vk 115 (115)
+|++ ++++|..+++|+| . ++|||.|+
T Consensus 76 ~g~~---~~~~~~~~~~v~p~~------~~~gt~v~ 102 (146)
T 3f08_A 76 NAPF---PVTNYLSTIQVKEGT------ESNTSLVE 102 (146)
T ss_dssp ECSS---SEEEEEEEEEEEECS------STTCEEEE
T ss_pred cCCC---ceeEEEEEEEEEEec------CCCcEEEE
Confidence 9964 4999999999999 5 57789874
No 19
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=99.88 E-value=2.7e-22 Score=148.01 Aligned_cols=91 Identities=21% Similarity=0.185 Sum_probs=74.9
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEe-cCCc----cccEEEEc-------eeeeEEEeeecCCc
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQ-GYGE----VGSIEVVS-------TSMQSRVDALDRDN 72 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~e-Gdg~----~Gsir~~t-------~~~kEri~~vDe~~ 72 (115)
+.....+|+|||+++|++ ++||++ ++.|+| .|+++++.+ |||+ +|+||.|+ ++++|||+.+|+++
T Consensus 31 ~s~~~~~I~Ap~d~VWal-VrdF~~-p~~w~p-~V~s~~~~e~Gdg~~~~~vGsVR~ltl~~G~P~~~i~ErL~~lDde~ 107 (189)
T 3oji_A 31 TSLIAHRVDAPAHAIWRF-VRDFAN-PNKYKH-FIKSCTIRVNGNGIKEIKVGTIREVSVVSGLPASTSVEILEVLDEEK 107 (189)
T ss_dssp EEEEEEEESSCHHHHHHH-HSCTTC-GGGTCT-TEEEEEECCC----CCCSTTCEEEEEECSSSSBSEEEEEEEEEETTT
T ss_pred ceeEEEEEcCCHHHHHHH-HhCCCC-hhhCcc-ccceEEEEecCCCCccCCCCcEEEEEecCCCcCceEEEEEEEEeccC
Confidence 344567899999999999 799999 478888 699999998 9886 99999999 48999999999999
Q ss_pred cEEEEEEEecCccCcceEEEEEEEEEEec
Q 044934 73 LYCKYTVFEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 73 ~~~~y~vieG~~l~~~~~s~~~~i~v~p~ 101 (115)
|+++|++++|++. +++|+++++|.|.
T Consensus 108 ~~~sY~Iieg~~p---v~nY~StitV~~~ 133 (189)
T 3oji_A 108 RILSFRVLGGEHR---LNNYRSVTSVNEF 133 (189)
T ss_dssp TEEEEEEEECSBS---SCSCEEEEEEEEE
T ss_pred CEEEEEEEecCCc---cccEEEEEEEEec
Confidence 9999999999965 5556666777775
No 20
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=99.88 E-value=1.5e-22 Score=151.58 Aligned_cols=93 Identities=16% Similarity=0.177 Sum_probs=83.6
Q ss_pred EEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCC-ccccEEEEc-------eeeeEEEeeecCCccEEEEE
Q 044934 7 DKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYG-EVGSIEVVS-------TSMQSRVDALDRDNLYCKYT 78 (115)
Q Consensus 7 ~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg-~~Gsir~~t-------~~~kEri~~vDe~~~~~~y~ 78 (115)
....+|+|||+++|++ ++||+++ ++|+| .|++|++++||| ++|+||.|+ .+++|||+++|+++|+|+|+
T Consensus 53 ~v~~~I~ApadkVW~l-v~dF~~l-~~w~p-~V~s~e~~eGd~g~vGsVR~lt~~~G~p~~~vkErL~~lDd~~~~~sYs 129 (211)
T 3k3k_A 53 LHAQRIHAPPELVWSI-VRRFDKP-QTYKH-FIKSCSVEQNFEMRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFS 129 (211)
T ss_dssp EEEEEESSCHHHHHHH-HTCTTCG-GGTCS-SEEEEECCTTCCCCTTCEEEEEESSSSSCEEEEEEEEEEETTTTEEEEE
T ss_pred EEEEEEcCCHHHHHHH-HhCcCCh-hHcCc-cceEEEEecCCCCCCCcEEEEEecCCCccceEEEEEEEEeccCCEEEEE
Confidence 3455899999999999 6999994 99999 799999999975 899999998 48999999999999999999
Q ss_pred EEecCccCcceEEEEEEEEEEecccccccCCCc
Q 044934 79 VFEEDCISDILELIVFQIKFGPYKLKKISSNAS 111 (115)
Q Consensus 79 vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg 111 (115)
++||++ +|++|+++++|.|. ++||
T Consensus 130 Iieg~l---pv~~Y~sti~V~p~------~~gg 153 (211)
T 3k3k_A 130 IIGGEH---RLTNYKSVTTVHRF------EKEN 153 (211)
T ss_dssp EEEETT---GGGTCEEEEEEEEE------EETT
T ss_pred EeecCc---ceeEEEEEEEEEEC------CCCC
Confidence 999985 48899999999998 6665
No 21
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=99.86 E-value=1.3e-23 Score=158.44 Aligned_cols=95 Identities=18% Similarity=0.185 Sum_probs=71.4
Q ss_pred EEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCC-ccccEEEEc-------eeeeEEEeeecCCccEEEEEEE
Q 044934 9 DGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYG-EVGSIEVVS-------TSMQSRVDALDRDNLYCKYTVF 80 (115)
Q Consensus 9 ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg-~~Gsir~~t-------~~~kEri~~vDe~~~~~~y~vi 80 (115)
..+|+|||+++|++ ++|+++ ++.|.| .|++++++|||| ++||||.|+ .++||||+++|++|++++|+++
T Consensus 83 ~~~I~ApadkVW~l-v~Df~~-pk~w~p-~I~s~el~eGdg~gvGSVR~lt~~~G~p~~~vkErLe~iDde~~~~sYsIi 159 (223)
T 3qrz_A 83 VQMIHAPPESVWAL-VRRFDN-PKVYKN-FIRQCRIVQGDGLHVGDLREVMVVSGLPAVSSTERLEILDEERHVISFSVV 159 (223)
T ss_dssp CCCCSSCHHHHHHH-HHCCSS-GGGTCS-SCCCCCCCC---CCSSCCCCCCC---CCCCCCCCCCSEEETTTTEEECCCT
T ss_pred EEEEcCCHHHHHHH-HhCCCC-hhHcch-hcCEEEEEcCCCCCCCeEEEEEecCCCccceEEEEEEEEeccCCEEEEEEE
Confidence 34899999999999 699998 244555 799999999998 999999999 3789999999999999999999
Q ss_pred ecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 81 EEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 81 eG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
||++. ++.|+.+++|+|. ++|||+|+
T Consensus 160 eG~~p---~~~Y~stikV~p~------~dGGT~V~ 185 (223)
T 3qrz_A 160 GGDHR---LKNYRSVTTLHAS------DDEGTVVV 185 (223)
T ss_dssp TCSSS---CCCCCCEEEC--------------CCE
T ss_pred eCCCc---cccEEEEEEEEEc------CCCCEEEE
Confidence 99975 4445555999998 78899874
No 22
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.85 E-value=2.8e-20 Score=129.18 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=88.9
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecC-CccccEEEEc----eeeeEEEeeecCCccEEEEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGY-GEVGSIEVVS----TSMQSRVDALDRDNLYCKYTV 79 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGd-g~~Gsir~~t----~~~kEri~~vDe~~~~~~y~v 79 (115)
+++.+++|+|||+++|++ +.|++++ |+|+|. ++++++++|+ +++|++|.++ ..++|+|+.+|++++.++|++
T Consensus 3 ~v~~si~I~ap~e~Vw~~-l~d~~~~-~~w~p~-v~~~~~~~g~~~~~G~~r~~~~~~G~~~~e~i~~~d~~~~~~~~~~ 79 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTL-VGDFSAI-HRWHPQ-VSAPTLRGASPHTPGAERVFGAGTEEELVERLVERDESARRLVYTM 79 (151)
T ss_dssp EEEEEEEESSCHHHHHHH-HTTSGGG-GGTCTT-CCCEEEESSCTTSTTCEEEESSSSSSCEEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEEecCCHHHHHHH-HhCcCcH-HHhcCC-ceEEEEECCCCCCCCeEEEEEeCCCCEEEEEEEEEeCCCCEEEEEE
Confidence 789999999999999999 5999996 999996 8999999986 6899999998 489999999999999999999
Q ss_pred EecCccCcceEEEEEEEEEEecccccccCCCceeeC
Q 044934 80 FEEDCISDILELIVFQIKFGPYKLKKISSNASCLMK 115 (115)
Q Consensus 80 ieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~vk 115 (115)
++|+. ++++|..+++|+|. +++||.++
T Consensus 80 ~~g~~---~~~~~~~~~~l~~~------~~~gt~v~ 106 (151)
T 2le1_A 80 PDPPF---PITNHRAVLEVVPR------DDRHCTVV 106 (151)
T ss_dssp EECSS---SEEEEEEEEEEEES------SSSCEEEE
T ss_pred ecCCC---CceeEEEEEEEEEC------CCCcEEEE
Confidence 99863 48999999999997 67788763
No 23
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=99.82 E-value=9.5e-20 Score=125.31 Aligned_cols=82 Identities=12% Similarity=0.171 Sum_probs=70.6
Q ss_pred Ccc-EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEceeeeEEEeeecCCccEEEEEE
Q 044934 1 MGV-LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVSTSMQSRVDALDRDNLYCKYTV 79 (115)
Q Consensus 1 m~~-~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t~~~kEri~~vDe~~~~~~y~v 79 (115)
|+. ++++.++++++||+|+|++| +++ +++| |.|. |+ +|++++|++|++++|++
T Consensus 1 m~~~g~~~~e~~i~~~a~k~w~~~-~~~-~~~p-~g~~--------------G~---------~~ie~iD~~~~~~~y~i 54 (122)
T 1vjh_A 1 STLKGALSVKFDVKCPADKFFSAF-VED-TNRP-FEKN--------------GK---------TEIEAVDLVKKTMTIQM 54 (122)
T ss_dssp CCSEEEEEEEEEESSCHHHHHHHH-HHH-TTSC-SSTT--------------CE---------EEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEEEEecCCHHHHHHHH-hhc-ccCC-ccCC--------------Cc---------cEEEEEecccCEEEEEE
Confidence 676 89999999999999999995 666 4568 6442 21 19999999999999999
Q ss_pred EecCccCcceEEEEEEEEEEecccccccC-CCceeeC
Q 044934 80 FEEDCISDILELIVFQIKFGPYKLKKISS-NASCLMK 115 (115)
Q Consensus 80 ieG~~l~~~~~s~~~~i~v~p~~~~~~~~-~gg~~vk 115 (115)
+||+++ ++|++|+++++|+|+ + +|||+||
T Consensus 55 ieGd~~-~~~~~~~~~~~v~~~------~~~~gs~vk 84 (122)
T 1vjh_A 55 SGSEIQ-KYFKTLKGSIAVTPI------GVGDGSHVV 84 (122)
T ss_dssp ECTTGG-GTEEEEEEEEEEEEC------SSSSCEEEE
T ss_pred EEcccc-ccEEEEEEEEEEEEe------cCCCCeEEE
Confidence 999987 799999999999998 6 7899885
No 24
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=99.26 E-value=1.6e-10 Score=81.91 Aligned_cols=99 Identities=13% Similarity=0.135 Sum_probs=76.4
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc------eeeeEEEeeecCCccEEE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS------TSMQSRVDALDRDNLYCK 76 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t------~~~kEri~~vDe~~~~~~ 76 (115)
..+++.++.|++||+++|+. +.|+.++ |.|+|. +.++++++++++.-.++.+. .....++. +|+.++.+.
T Consensus 4 M~~v~~si~I~ap~~~V~~~-v~D~~~~-p~~~P~-~~~~~v~~~~~~~~~~~~~~~~~G~~~~~~s~~~-~~~~~~~i~ 79 (172)
T 3tfz_A 4 MRHVEHTVTVAAPADLVWEV-LADVLGY-ADIFPP-TEKVEILEEGQGYQVVRLHVDVAGEINTWTSRRD-LDPARRVIA 79 (172)
T ss_dssp CEEEEEEEEESSCHHHHHHH-HHCGGGH-HHHCSS-EEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE-EETTTTEEE
T ss_pred CcEEEEEEEeCCCHHHHHHH-HHhHHHH-HhhCcc-cceEEEEecCCCEEEEEEEEecCCEEEEEEEEEE-EeCCCCEEE
Confidence 45789999999999999999 7999995 999995 99999998754221223222 23344444 788899999
Q ss_pred EEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 77 YTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 77 y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
|++++++. +++.+....+|.|. +++||.|
T Consensus 80 ~~~~~~~g---pf~~~~g~w~f~~~------~~~~t~V 108 (172)
T 3tfz_A 80 YRQLETAP---IVGHMSGEWRAFTL------DAERTQL 108 (172)
T ss_dssp EEEEECCT---TEEEEEEEEEEEEE------ETTEEEE
T ss_pred EEEeeCCC---ChhhcEEEEEEEEC------CCCcEEE
Confidence 99998653 47888888999998 6788976
No 25
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=99.20 E-value=4.4e-10 Score=79.76 Aligned_cols=96 Identities=13% Similarity=0.115 Sum_probs=77.0
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEE---c-----eeeeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVV---S-----TSMQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~---t-----~~~kEri~~vDe~~~~~ 75 (115)
..++.++.|++||+++|++ +.|+.++ |.|+|. +.++++++++|..-.+|.+ . .....+. .+|++++.+
T Consensus 3 ~~v~~si~I~a~~~~V~~l-V~Dve~y-P~~~p~-~~~~~vl~~~~~~~~~rl~~~~~~~G~~~~~ts~~-~~d~~~~~I 78 (159)
T 3tl1_A 3 GHTDNEITIAAPMELVWNM-TNDIEKW-PGLFSE-YASVEVLGRDDDKVTFRLTMHPDADGKVWSWVSER-VADPVTRTV 78 (159)
T ss_dssp SEEEEEEEESSCHHHHHHH-HTCGGGH-HHHCSS-EEEEEEEEECSSEEEEEEEECCCTTSCCCEEEEEE-EEETTTTEE
T ss_pred CeeEEEEEecCCHHHHHHH-HHhHHHh-hhhhhC-ceEEEEEecCCCEEEEEEEEEeccCceEEEEEEEE-EEcCCCCEE
Confidence 3688999999999999999 7999995 999995 9999999888755566765 2 3333443 489999999
Q ss_pred EEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 76 KYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 76 ~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.|+.++.+ +++++..+.+|+|. ++ ||.|
T Consensus 79 ~~~~~~~g----Pf~~l~g~W~f~p~------~~-gt~V 106 (159)
T 3tl1_A 79 RAQRVETG----PFQYMNIVWEYAET------AE-GTVM 106 (159)
T ss_dssp EEEESSCT----TEEEEEEEEEEEEE------TT-EEEE
T ss_pred EEEEccCC----ChhhccCEEEEEEC------CC-CEEE
Confidence 99987433 37889999999998 55 7876
No 26
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=99.18 E-value=6.2e-10 Score=73.78 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=68.9
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-------eeeeEEEeeecCCccEEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-------TSMQSRVDALDRDNLYCKY 77 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-------~~~kEri~~vDe~~~~~~y 77 (115)
+++.+++|++|++++|++ +.|+.++ |+|+|. +.+++++++++ .|....|+ ..+..++. .++.++.+.|
T Consensus 3 ~~~~~~~i~ap~~~V~~~-l~d~~~~-~~w~p~-~~~~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~ 77 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRL-AKDLEGL-KPYLKE-VESLEVVAREG-ARTRSRWVAVAMGKKVRWLEEEE-WDDENLRNRF 77 (147)
T ss_dssp EEEEEEEESSCHHHHHHH-HHCHHHH-GGGCTT-EEEEEEEEEET-TEEEEEEEEEETTEEEEEEEEEE-EETTTTEEEE
T ss_pred eEEEEEEeCCCHHHHHHH-HhChhhh-hhhccc-ccEEEEEEeCC-CccEEEEEEEeCCceEEEEEEEE-EcCCCcEEEE
Confidence 678899999999999999 5999985 999995 78888887643 24444444 23444544 4577889999
Q ss_pred EEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 78 TVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 78 ~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
++.+|+. +.+..+.+|+|. ++| |.+
T Consensus 78 ~~~~g~~-----~~~~~~~~~~~~------~~g-T~v 102 (147)
T 2d4r_A 78 FSPEGDF-----DRYEGTWVFLPE------GEG-TRV 102 (147)
T ss_dssp EEEEESC-----SEEEEEEEEEEC------SSS-EEE
T ss_pred EeccCCh-----hheEEEEEEEEC------CCC-cEE
Confidence 9988753 455678888998 554 765
No 27
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=99.17 E-value=5.7e-10 Score=78.77 Aligned_cols=95 Identities=6% Similarity=0.045 Sum_probs=74.0
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc----eeeeEEEeeecCCccEEEEE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS----TSMQSRVDALDRDNLYCKYT 78 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t----~~~kEri~~vDe~~~~~~y~ 78 (115)
..+++.+++|+|||+++|++ +.|+.++ |.|.|. +.++++ +|.-.+|+.+.++ ..+..+|..+|+..+ +++.
T Consensus 17 ~~~i~~si~I~Appe~VW~~-ltD~~~~-~~W~p~-v~~~~~-~G~~~~G~~~~~~~~~~~~~~~~v~~~~p~~~-~~~~ 91 (155)
T 3ijt_A 17 SMKFSFELAVNTKKEDAWTY-YSQVNQW-FVWEGD-LEQISL-EGEFTTGQKGKMKMEDMPELAFTLVEVRENQC-FSDL 91 (155)
T ss_dssp CEEEEEEEEESSCHHHHHHH-HHCGGGG-GGTSTT-EEEEEE-SSSSSTTCEEEEEETTSCCEEEEECCCBTTTE-EEEE
T ss_pred cEEEEEEEEEcCCHHHHHHH-HhCcccc-cccchh-hEeeec-cCCCCCCCEEEEEeCCCCcEEEEEEEEeCCcE-EEEE
Confidence 35889999999999999999 5999995 999996 888874 5766889888877 578889999998876 6675
Q ss_pred EEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 79 VFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 79 vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.-- + ...+..+..++|. ++|||.+
T Consensus 92 ~~~--p----~~~~~~~h~l~p~------~~ggTrv 115 (155)
T 3ijt_A 92 TAT--P----FGNVLFEHEILEN------PDGTISL 115 (155)
T ss_dssp EEE--T----TEEEEEEEEEEEC------TTSCEEE
T ss_pred Eec--C----CeEEEEEEEEEEc------CCCcEEE
Confidence 432 1 2245566688887 6778865
No 28
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=99.13 E-value=8.5e-10 Score=79.01 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=73.4
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEE---c-----eeeeEEEeeecCCccE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVV---S-----TSMQSRVDALDRDNLY 74 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~---t-----~~~kEri~~vDe~~~~ 74 (115)
...++.++.|++||+++|++ +.|+.++ |.|+|. +.+++++++++..-..+.+ . .....+. .+|++++.
T Consensus 2 a~~v~~si~I~a~~~~v~~l-v~Dv~~~-p~w~p~-~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~ts~~-~~d~~~~~ 77 (169)
T 3tvq_A 2 AARTDNSIVVNAPFELVWDV-TNDIEAW-PELFSE-YAEAEILRQDGDGFDFRLKTRPDANGRVWEWVSHR-VPDKGSRT 77 (169)
T ss_dssp CEEEEEEEEESSCHHHHHHH-HTCGGGH-HHHCTT-EEEEEEEEEETTEEEEEEEECCCTTSCCCEEEEEE-EEEGGGTE
T ss_pred CCeEEEEEEecCCHHHHHHH-HHhhhHH-HHHHhh-eeEEEEEecCCCEEEEEEEEEecCCCeEEEEEEEE-EEcCCCcE
Confidence 45789999999999999999 7999995 999995 8999999886532223332 1 2222332 38899999
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.|+.++++ +++.+..+.+|+|. ++| |.|
T Consensus 78 I~~~~l~~g----Pf~~~~g~W~f~p~------~~g-t~V 106 (169)
T 3tvq_A 78 VRAHRVETG----PFAYMNLHWTYRAV------AGG-TEM 106 (169)
T ss_dssp EEEEESSCT----TEEEEEEEEEEEEE------TTE-EEE
T ss_pred EEEEEcCCC----ChhheeeEEEEEEC------CCC-EEE
Confidence 999986543 37788899999998 555 876
No 29
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=98.78 E-value=3.8e-08 Score=67.33 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=70.2
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecC--C-ccccEEEEc-------eeeeEEEeeecCCccE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGY--G-EVGSIEVVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGd--g-~~Gsir~~t-------~~~kEri~~vDe~~~~ 74 (115)
+++.++.|++|++++|++ +.|..++ |+|+|. ++++++++.+ | +.+....|+ ..+..|+. +|+.+..
T Consensus 3 ~~~~s~~i~ap~~~v~~~-v~D~~~~-p~~~p~-~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~ 78 (148)
T 1t17_A 3 RHVVTKVLPYTPDQLFEL-VGDVDAY-PKFVPW-ITGMRTWNGRVDGAVSTVDAEAQVGFSFLREKFATRVR-RDKDARS 78 (148)
T ss_dssp EEEEEEEESSCTHHHHHH-HTTTTCC-SSCCSS-CCCCCEEEEEEETTEEEEEEEEECSTTSSCCEEEEEEE-EETTTCE
T ss_pred EEEEEEEecCCHHHHHHH-HHHHhhH-HhhCCC-cCeeEEEEecCCCCCceEEEEEEEEecceeEEEEEEEE-EcCCCcE
Confidence 678899999999999999 7999995 999996 7778888642 2 133444444 45566766 5777778
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.++.++|+ ++.+....+|+|. ++| |.+
T Consensus 79 i~~~~~~G~-----f~~~~g~w~f~~~------~~g-t~v 106 (148)
T 1t17_A 79 IDVSLLYGP-----FKRLNNGWRFMPE------GDA-TRV 106 (148)
T ss_dssp EEEEESSTT-----SSCEEEEEEEEEE------TTE-EEE
T ss_pred EEEEECCCC-----hhccEEEEEEEEC------CCC-eEE
Confidence 999999874 3456677888887 554 865
No 30
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=98.71 E-value=6.5e-08 Score=67.16 Aligned_cols=95 Identities=11% Similarity=0.100 Sum_probs=64.4
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCc------c-c-cEEEEceeeeEEEeeecCCc
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGE------V-G-SIEVVSTSMQSRVDALDRDN 72 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~------~-G-sir~~t~~~kEri~~vDe~~ 72 (115)
||..+++.++.|++|++++|+. +.|+.+ +|+|+|. +.+++++++++. + | .-.. ..-++..+ +.+
T Consensus 1 ~~~~~v~~s~~I~ap~e~V~~~-~~D~e~-~p~w~p~-~~~v~~~~~~~~~~~~~~~~G~~~~~----~~~~v~e~-~p~ 72 (155)
T 3ggn_A 1 MGETVVRDAVTIGKPAEQLYAV-WRDLPG-LPLLMTH-LRSVEVLDDKRSRWTVEAPAPLGTVS----WEAELTAD-EPG 72 (155)
T ss_dssp ---CEEEEEEEESSCHHHHHHH-HHCGGG-HHHHSTT-CCEEEECSSSEEEEEEECCTTTCEEE----EEEEEEEE-ETT
T ss_pred CCccEEEEEEEEcCCHHHHHHH-HhCHHH-hHHHhhh-ceEEEEecCCeeEEEEEecCCcceEE----EEEEEEEe-cCC
Confidence 8899999999999999999999 699999 4999996 889988865321 1 2 1112 23344433 456
Q ss_pred cEEEEEEEecCccCcceEEEEEEEEEEecccccccC-CCceee
Q 044934 73 LYCKYTVFEEDCISDILELIVFQIKFGPYKLKKISS-NASCLM 114 (115)
Q Consensus 73 ~~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~-~gg~~v 114 (115)
+.+.++..+|... .+..+++|+|. + ++||.|
T Consensus 73 ~~i~~~~~~g~~~-----~~~g~~~F~~~------~~~~gT~V 104 (155)
T 3ggn_A 73 KRIAWRSLPGARI-----ENSGEVLFRPA------PGARGTEV 104 (155)
T ss_dssp TEEEEEECTTCSS-----CEEEEEEEEEC------SSSSCEEE
T ss_pred CEEEEEECCCCCc-----ceEEEEEEEEC------CCCCceEE
Confidence 6788999887532 34556677776 4 457865
No 31
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=98.67 E-value=3.7e-07 Score=62.09 Aligned_cols=96 Identities=13% Similarity=0.238 Sum_probs=60.8
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEE----EceeeeE--EEeeecCCccEEEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEV----VSTSMQS--RVDALDRDNLYCKYT 78 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~----~t~~~kE--ri~~vDe~~~~~~y~ 78 (115)
+++.++.|++|++++|++ +.|+.++ |+|+|. +.+++ .+|++-...++. +...+.- ++..+|+. +.+.|+
T Consensus 14 ~i~~~~~i~ap~e~Vw~~-l~D~~~~-~~w~p~-~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~i~~~ 88 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEF-LTDPKRF-SRAFPG-FKSVE-VEDGSFTIELRLSLGPLRGDARVRASFEDLEKP-SKATVK 88 (157)
T ss_dssp EEEEEEEESSCHHHHHHH-HTCHHHH-GGGSTT-EEEEE-EETTEEEEEEEEESSSSEEEEEEEEEEEEEETT-TEEEEE
T ss_pred EEeeEEEEcCCHHHHHHH-HcCHHHH-HhhCCC-ceEEE-ECCCEEEEEEEEEEcceeEEEEEEEEEEecCCC-cEEEEE
Confidence 789999999999999999 5999884 999996 67888 555431111111 0122333 44456654 456676
Q ss_pred EEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 79 VFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 79 vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.-..+.. ...+ +..+++++|. + +||.+
T Consensus 89 ~~~~~~~-~~~~-~~~~~~l~~~------~-~gT~v 115 (157)
T 2ns9_A 89 GSGRGAG-STLD-FTLRFAVEPS------G-GGSRV 115 (157)
T ss_dssp EEEECSS-EEEE-EEEEEEEEEE------T-TEEEE
T ss_pred EEecCCC-ccEE-EEEEEEEEeC------C-CcEEE
Confidence 4321211 2333 6788999998 5 67865
No 32
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=98.65 E-value=5.2e-07 Score=62.13 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=62.5
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEE-Ec---eeeeE--EEeeecCCccEEEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEV-VS---TSMQS--RVDALDRDNLYCKYT 78 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~-~t---~~~kE--ri~~vDe~~~~~~y~ 78 (115)
+++.++.|++|++++|++ +.|+.+ +|+|+|. +.+++..+|++-...++. +. ..+.- ++..+|+. +.+.++
T Consensus 4 ~i~~~~~i~ap~e~Vw~~-l~D~e~-~~~w~p~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSK-LMDPSI-LSKCIMG-CKSLELIGEDKYKADLQIGIAAVKGKYDAIIEVTDIKPP-YHYKLL 79 (162)
T ss_dssp EEEEEEEEESCHHHHHHH-HTCHHH-HHHHSTT-EEEEEEEETTEEEEEEEECCGGGCEEEEEEEEEEEEETT-TEEEEE
T ss_pred EEeeEEEecCCHHHHHHH-hcCHHH-HHhhCCC-ceEeEEeCCCeEEEEEEEEeeeEEEEEEEEEEEEecCCC-cEEEEE
Confidence 588999999999999999 599988 4999996 788888755431111111 00 22323 55556664 355555
Q ss_pred EEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 79 VFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 79 vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
....+. .....+..+++|+|. ++|||.+
T Consensus 80 ~~~~~~--~~~~~~~~~~~l~~~------~~~gT~v 107 (162)
T 2pcs_A 80 VNGEGG--PGFVNAEGVIDLTPI------NDECTQL 107 (162)
T ss_dssp EEEEET--TEEEEEEEEEEEEES------SSSEEEE
T ss_pred EEecCC--CccEEEEEEEEEEec------CCCcEEE
Confidence 542111 223456788999995 4667865
No 33
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=98.37 E-value=1e-06 Score=59.64 Aligned_cols=87 Identities=10% Similarity=0.036 Sum_probs=61.4
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---eeeeEEEeeecCCccEEEEEEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---TSMQSRVDALDRDNLYCKYTVF 80 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~~~kEri~~vDe~~~~~~y~vi 80 (115)
.+++.++.|+||++++|++ +.|+.. +++|.|. .+++..+|..-.+. +.+.-++..+|+. +.+.|+..
T Consensus 8 ~~i~~~~~i~ap~e~Vw~~-ltd~~~-~~~W~~~-------~~~~~~~G~~~~~~~~~g~~~~~v~e~~p~-~~l~~~~~ 77 (143)
T 1xn6_A 8 NDIKQTIVFNASIQKVWSV-VSTAEG-IASWFMP-------NDFVLEVGHEFHVQSPFGPSPCKVLEIDEP-NHLSFSWD 77 (143)
T ss_dssp CCEEEEEEESSCHHHHHHT-TSCSHH-HHTTSCC-------BCCCCCTTCEECBCCTTCCCCEEEEEEETT-TEEEEEET
T ss_pred CEEEEEEEEcCCHHHHHHH-HhCHhH-HHHhcCC-------CCcCcCCCCEEEEEEcCCCceEEEEEEeCC-CEEEEEEe
Confidence 4688999999999999999 589877 5999996 23454556554444 3467778888874 55677764
Q ss_pred ecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 81 EEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 81 eG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.+ ....+++|+|. ++|||.+
T Consensus 78 ~~--------~~~~~~~l~~~------~~g~T~l 97 (143)
T 1xn6_A 78 TD--------GWVVSFDLKDL------GDNKTEF 97 (143)
T ss_dssp TT--------TEEEEEEEEEE------ETTEEEE
T ss_pred CC--------CEEEEEEEEEC------CCCcEEE
Confidence 33 34567788887 5557754
No 34
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=98.33 E-value=4.6e-06 Score=58.26 Aligned_cols=95 Identities=11% Similarity=0.134 Sum_probs=64.8
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEE--EEc-------eeeeEEEeeecCCccE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIE--VVS-------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir--~~t-------~~~kEri~~vDe~~~~ 74 (115)
.+++.++.|++||+++|++ +.|..+ +|.+.|+...-.+ . ++| ....+ .+. .....|++ .|++++.
T Consensus 7 i~v~~s~~I~ap~e~v~~l-v~Dve~-w~~~yp~~~p~~~-~-~~~-~~~~~~a~l~vg~~~~~~~~~s~~~-~~~~~~~ 80 (161)
T 3p9v_A 7 IELNRDLEIPASYDEVFDL-LADVPK-SASHFPKVDKLVD-L-GNN-AYRWEMEKVGVDKHAIQSVYACTYH-ADKEAGK 80 (161)
T ss_dssp EEEEEEEEESSCHHHHHHH-HTCHHH-HHTTSTTEEEEEE-E-ETT-EEEEEECCBSSGGGCBCCEEEEEEE-EETTTTE
T ss_pred EEEEEEEEEcCCHHHHHHH-HhChhh-hHhhCCCeEEEEE-c-CCC-ceEEEEEEEeeeeEEEEEEEEEEEE-EcCCCCE
Confidence 5788899999999999999 799998 4777776443322 2 333 11111 122 24445544 6777889
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.++.++|+. .++...+.+|+|. ++|+|.|
T Consensus 81 I~~~~~~g~~----~~~l~g~w~f~p~------~~g~t~V 110 (161)
T 3p9v_A 81 ITWSPIKGEG----NGVVSGSWTLSAK------GDNATAV 110 (161)
T ss_dssp EEEEECTTST----TEEEEEEEEEEES------SSSCEEE
T ss_pred EEEEEecCcc----ceeEEEEEEEEEC------CCCeEEE
Confidence 9999998764 2566678889998 7777866
No 35
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=98.19 E-value=3.6e-05 Score=51.39 Aligned_cols=99 Identities=18% Similarity=0.157 Sum_probs=63.3
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---------eeeeEEEeeecCCccE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---------TSMQSRVDALDRDNLY 74 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---------~~~kEri~~vDe~~~~ 74 (115)
.++..++.|+||++++|++ +.|... +++|.|..--.+...++|..+|..-.+. ....-++..+++. +.
T Consensus 3 ~~~~~~~~i~ap~e~Vw~a-ltd~~~-~~~W~~~~~~~~~~~~~~~~~Gg~~~~~~~~~~~g~~~~~~~~v~~~~p~-~~ 79 (147)
T 1z94_A 3 NTIRLHRVLSAPPERVYRA-FLDPLA-LAKWLPPEGFVCKVLEHDARVGGAYKMEFLAFASGQKHAFGGRYLELVPG-ER 79 (147)
T ss_dssp CCEEEEEEESSCHHHHHHH-TTCHHH-HHHHSSCTTEEEEEEEECCSTTCEEEEEEEETTTCCEEEEEEEEEEEETT-TE
T ss_pred cEEEEEEEeCCCHHHHHHH-hCCHHH-HhhccCCCCEeeeEEEEccCCCcEEEEEEEECCCCCEEEEEEEEEEEcCC-CE
Confidence 3578889999999999999 589777 5999975312223345665566544432 2356677878764 55
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.|+...++.-... ....++.|+|. + +||.+
T Consensus 80 l~~~~~~~~~~~~~--~~~~~~~l~~~------~-~gT~l 110 (147)
T 1z94_A 80 IRYTDRFDDAGLPG--DMITTITLAPL------S-CGADL 110 (147)
T ss_dssp EEEEEEESCCC-----CEEEEEEEEEE------T-TEEEE
T ss_pred EEEEEEEeCCCCCC--cEEEEEEEEec------C-CCEEE
Confidence 67877654321111 34667888887 4 46754
No 36
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=98.14 E-value=2.7e-05 Score=52.17 Aligned_cols=84 Identities=13% Similarity=0.209 Sum_probs=57.9
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----eeeeEEEeeecCCccEEEEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----TSMQSRVDALDRDNLYCKYTV 79 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~~~kEri~~vDe~~~~~~y~v 79 (115)
+++.++.|+||++++|+++ .|+.. +++|.|.. .+++-.+|..-.+. ....-++..+++.+ .+.|+.
T Consensus 2 ~i~~~~~i~ap~e~Vw~al-td~~~-~~~W~~~~------~~~~~~~Gg~~~~~~~~~~~~~~~~v~~~~p~~-~l~~~~ 72 (135)
T 3q6a_A 2 DIITKMQVDVPRETVFEAF-VDPEK-IGGFWFSS------SSERWEQGKTITLRYEEYDAELNINIERVEDNQ-LIAFTW 72 (135)
T ss_dssp CEEEEEEESSCHHHHHHHH-HCTTT-GGGTSSSE------ESSCCCTTCEEEEECGGGTC-CEEEEEEEETTT-EEEEEE
T ss_pred eEEEEEEeCCCHHHHHHHH-cCHHH-hcccCCCC------CcccccCCCEEEEEEcCcCceEEEEEEEEcCCC-EEEEEE
Confidence 4788999999999999994 89887 59997642 34666677665554 23344677777654 456766
Q ss_pred EecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 80 FEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 80 ieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
..| ..++.++|. ++||.+
T Consensus 73 ~~g----------~~~~~l~~~-------~~gT~l 90 (135)
T 3q6a_A 73 GAH----------PITIQFEES-------EAGTVV 90 (135)
T ss_dssp TTE----------EEEEEEEEE-------TTEEEE
T ss_pred cCC----------eEEEEEEEC-------CCCEEE
Confidence 421 677888887 456754
No 37
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=98.10 E-value=4.1e-05 Score=50.83 Aligned_cols=90 Identities=11% Similarity=0.061 Sum_probs=58.0
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc----e---eeeEEEeeecCCccEEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS----T---SMQSRVDALDRDNLYCK 76 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t----~---~~kEri~~vDe~~~~~~ 76 (115)
.+++.++.|+||++++|++ +.|+.+ +++|.+... .+++-.+|..-.+. + .+..++..+++. +.+.
T Consensus 5 ~~i~~~~~i~ap~e~Vw~~-ltd~~~-~~~W~~~~~-----~~~~~~~G~~~~~~~~~~g~~~~~~~~v~~~~p~-~~l~ 76 (146)
T 2leq_A 5 LIAQVKTVINAPIEKVWEA-LVNPEI-IKEYMFGTT-----VVSDWKEGSQIVWKGEWKGKAYEDKGTILQFNER-SILQ 76 (146)
T ss_dssp EEEEEEEEECSCHHHHHHH-HSCTTH-HHHHSSSCE-----EECCCSTTCEEEEEEEETTEEEEEEEEEEEEETT-TEEE
T ss_pred ceEEEEEEECCCHHHHHHH-HcCHHH-hceeEcCCc-----ceeccCCCCEEEEEecCCCceecccEEEEEEcCC-CEEE
Confidence 5789999999999999999 599887 599963222 23554566554454 2 567788888874 4566
Q ss_pred EEEEec-Ccc-CcceEEEEEEEEEEec
Q 044934 77 YTVFEE-DCI-SDILELIVFQIKFGPY 101 (115)
Q Consensus 77 y~vieG-~~l-~~~~~s~~~~i~v~p~ 101 (115)
|+.... +.+ ...-.....++.|+|.
T Consensus 77 ~~~~~~~~g~~~~~~~~~~~~~~l~~~ 103 (146)
T 2leq_A 77 YSHFSPLTGKPDLPENYHVVTITLTAL 103 (146)
T ss_dssp EECBCGGGCCCSCGGGSCEEEEEEEEC
T ss_pred EEEccCccCCCCCCCCceEEEEEEEEc
Confidence 776432 000 0011234567788887
No 38
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=98.09 E-value=5.3e-05 Score=51.15 Aligned_cols=90 Identities=8% Similarity=0.043 Sum_probs=59.8
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccc-cccceeeEEEEecCCccccEEEEc-----e----eeeEEEeeecCCccE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKL-LPQAFKSIVYEQGYGEVGSIEVVS-----T----SMQSRVDALDRDNLY 74 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~-~P~~v~sve~~eGdg~~Gsir~~t-----~----~~kEri~~vDe~~~~ 74 (115)
++..++.|+||++++|++ +.|... +++| .+..--.+...++|..+|..-.+. + .+.-++..+++. +.
T Consensus 2 ~i~~~~~i~ap~e~Vw~a-ltd~~~-~~~W~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~g~~~~~~~~~v~~~~p~-~~ 78 (142)
T 2lcg_A 2 NITVETTVAAPVGKVWRA-YTTPED-IKQWNAASDDWHTTAATVDLREGGAFSSRMEAKDGSMGFDFAGTYTKVVEN-KR 78 (142)
T ss_dssp EEEEEEEESSCHHHHHHH-TTCHHH-HHHHCCSSTTEEEEEEEECCSTTCEEEEEEEETTSSCEEEEEEEEEEEETT-TE
T ss_pred eEEEEEEeCCCHHHHHHH-hCCHHH-HhcCCCCCCCccceeeEEccccCCEEEEEEEcCCCCceeeeEEEEEEEcCC-CE
Confidence 578899999999999999 589777 5899 653212233445666666654433 1 256677778764 45
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.|+. .| ...++.|+|. + +||.+
T Consensus 79 l~~~~-~g---------~~~~~~l~~~------~-~gT~l 101 (142)
T 2lcg_A 79 IEYAF-GD---------RTAKVEFLEA------P-QGVTV 101 (142)
T ss_dssp EEEEE-TT---------EEEEEEEEEE------T-TEEEE
T ss_pred EEEEc-CC---------CEEEEEEEEc------C-CCEEE
Confidence 66775 11 5667888887 4 56754
No 39
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=98.08 E-value=6.1e-05 Score=52.16 Aligned_cols=99 Identities=11% Similarity=0.080 Sum_probs=64.1
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~~ 75 (115)
.+++.++.|+||++++|++ +.|... +++|.+..--.+...++|..+|..-.+. + ...-++..+++. +.+
T Consensus 14 ~~i~~~~~i~ap~e~Vw~a-ltdp~~-~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~~v~e~~p~-~rl 90 (171)
T 2il5_A 14 VEVEIEKLYKFSPELVYEA-WTKKDL-LKQWFMTSARTNKEIEADVKEGGKYRIVDQQRNGKVNVIEGIYESLVMD-EYV 90 (171)
T ss_dssp EEEEEEEEESSCHHHHHHH-TTCHHH-HTTTSSSCTTTEEEEEECCSTTCEEEEEEECGGGCEEEEEEEEEEEETT-TEE
T ss_pred ceEEEEEEeCCCHHHHHHH-HCCHHH-HHhccCCCCccceEEEecccCCCEEEEEEECCCCCEEEEEEEEEEEcCC-CEE
Confidence 5788999999999999999 588776 4889864222233455676666554443 1 356677878764 456
Q ss_pred EEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 76 KYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 76 ~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.|+.-.++.. .. ....++.|+|. ++|||.+
T Consensus 91 ~~~~~~~~~~-~~--~~~~~~~l~~~------~~g~T~l 120 (171)
T 2il5_A 91 KMTIGMPGLS-ET--QDVIEVEFFER------ETGGTQM 120 (171)
T ss_dssp EEEESCC--C-CC--CEEEEEEEEEC------SSSSEEE
T ss_pred EEEEEecCCC-CC--cEEEEEEEEEC------CCCCEEE
Confidence 6776543311 12 35677888897 5557754
No 40
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=98.07 E-value=0.0001 Score=51.78 Aligned_cols=100 Identities=11% Similarity=-0.006 Sum_probs=63.4
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~~ 75 (115)
.++..++.|+||++++|++| .|... +++|.+..--.+...++|..+|..-.+. + ...-++..+++.+ .+
T Consensus 22 ~~i~~~r~i~Ap~e~Vw~al-tdpe~-~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~~v~e~~p~~-rl 98 (178)
T 1xuv_A 22 QEIIITREFDAPRELVFKAF-TDPDL-YTQWIGPRGFTTALKIFEPKNGGSWQYIQKDPEGNEYAFHGVNHDVTEPE-RI 98 (178)
T ss_dssp SEEEEEEEESSCHHHHHHHH-HCHHH-HTTTCSSTTCEEEEEEECCSTTCEEEEEEECTTSCEEEEEEEEEEEETTT-EE
T ss_pred cEEEEEEEECCCHHHHHHHh-CCHHH-HHhCCCCCCccceEEEEecccCCEEEEEEECCCCCEEEEEEEEEEEeCCC-EE
Confidence 46888999999999999995 89777 5899753211233445666566554433 1 3566788888754 45
Q ss_pred EEEEEecC-ccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 76 KYTVFEED-CISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 76 ~y~vieG~-~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.|+.--++ +.... ....++.|+|. ++|||.+
T Consensus 99 ~~~~~~~~~~~~~~--~~~v~~~l~~~------~~ggT~l 130 (178)
T 1xuv_A 99 ISTFEFEGLPEKGH--VILDTARFEAL------PGDRTKL 130 (178)
T ss_dssp EEEEEETTSSSSCC--CEEEEEEEEEE------TTTEEEE
T ss_pred EEEEEecCCCCCCC--cEEEEEEEEEc------CCCCEEE
Confidence 56654332 21011 35667888898 5467765
No 41
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=97.94 E-value=5.4e-05 Score=51.51 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=55.7
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---eeeeEEEeeecCCccEEEEEE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---TSMQSRVDALDRDNLYCKYTV 79 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~~~kEri~~vDe~~~~~~y~v 79 (115)
..+++.++.|+||++++|++ +.|+.. +++|.|.. +++..+|..-.+. +.+.-++..+++.+ .+.|+.
T Consensus 4 ~~~i~~~~~i~Ap~e~Vw~a-ltd~~~-~~~W~~~~-------~~~~~~Gg~~~~~~~~g~~~~~v~e~~p~~-~l~~~~ 73 (146)
T 1xn5_A 4 LPDIKKEVRFNAPIEKVWEA-VSTSEG-LAFWFMEN-------DLKAETGHHFHLQSPFGPSPCQVTDVERPI-KLSFTW 73 (146)
T ss_dssp CCCEEEEEEESSCHHHHHHH-TTSHHH-HHTTSCCB-------CCCSCTTCEEEEECSSCEEEEEEEEEETTT-EEEEEE
T ss_pred CcEEEEEEEEcCCHHHHHHH-HhChhH-HHHhcCCC-------CCCccCCCEEEEEecCCceEEEEEEEeCCc-EEEEEE
Confidence 35688999999999999999 589877 59999852 3454566554443 45677788888754 555665
Q ss_pred EecCccCcceEEEEEEEEEEec
Q 044934 80 FEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 80 ieG~~l~~~~~s~~~~i~v~p~ 101 (115)
.. . ....++.|+|.
T Consensus 74 ~~-~-------~~~~~~~l~~~ 87 (146)
T 1xn5_A 74 DT-D-------GWSVTFHLKEE 87 (146)
T ss_dssp TT-T-------TEEEEEEEEEC
T ss_pred eC-C-------CEEEEEEEEEc
Confidence 32 1 13456777887
No 42
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=97.93 E-value=0.00027 Score=49.09 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=62.0
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~~ 75 (115)
.++..++.|+||++++|++| .|... +++|.+..=-.+...++|..+|..-.+. + ...-++..+++.++ +
T Consensus 12 ~~i~~~~~i~Ap~e~Vw~al-tdp~~-~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~g~~~~~~~~v~e~~p~~r-l 88 (172)
T 2ldk_A 12 LSFSIVAEFDADVKRVWAIW-EDPRQ-LERWWGPPTWPATFETHEFTVGGKAAYYMTGPDGTKARGWWQFTTIEAPDH-L 88 (172)
T ss_dssp TEEEEEEEESSCHHHHHHHH-HCHHH-HHTTSSCTTSCEEEEEECCSTTCEEEEEEECTTSCEEEEEEEEEEECSSSE-E
T ss_pred ceEEEEEEeCCCHHHHHHHh-CCHHH-HHhccCCCCcccceEEEeecCCCEEEEEEECCCCCEEeeEEEEEEEcCCCE-E
Confidence 46888999999999999995 88776 4888653211233445676666544332 1 36778888887554 4
Q ss_pred EEEEEecCccC---cceEEEEEEEEEEecccccccCCCceee
Q 044934 76 KYTVFEEDCIS---DILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 76 ~y~vieG~~l~---~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.|+.-.++..+ ........++.|+|. +|||.+
T Consensus 89 ~~~~~~~~~~g~p~~~~~~~~v~~~l~~~-------~~gT~l 123 (172)
T 2ldk_A 89 EFDDGFADEHGAPVDELGVTHATVKLEPL-------ENRTRM 123 (172)
T ss_dssp EEEEEEBCSSCCBCTTTCEEEEEEEEEEE-------TTEEEE
T ss_pred EEEEeecCCCCCccCCCccEEEEEEEEEc-------CCCEEE
Confidence 56654322110 111245667888887 456754
No 43
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=97.90 E-value=0.00036 Score=48.55 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=61.7
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCccE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLY 74 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~ 74 (115)
-.++..++.|+||++++|++| .|... +++|.+..--.+...++|..+|..-.+. + .+.-++..+++..+
T Consensus 12 ~~~i~~~~~i~Ap~e~Vw~al-tdp~~-~~~W~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~g~v~e~~p~~r- 88 (164)
T 3pu2_A 12 ATRLEFRRHFAATPEQLWAAL-TSPAL-LPAWLFARGWPMTECVFEPHKGGLIRQVWTGPEGRTRGLTGRVILAEPPHR- 88 (164)
T ss_dssp TTEEEEEEEESSCHHHHHHHH-HCTTT-GGGTSCBTTBCEEEEEECCSTTCEEEEEEECGGGCEEEEEEEEEEEETTTE-
T ss_pred CceEEEEEEECCCHHHHHHHh-cCHHH-HhhEeCCCCeeeEEEEEeccCCCEEEEEEECCCCCEEEEEEEEEEEcCCCE-
Confidence 346888999999999999995 88777 5899874222233455676666543322 2 46677787877544
Q ss_pred EEEEEE-ecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 75 CKYTVF-EEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 75 ~~y~vi-eG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.|+.- .++.. .. .-..++.|+|. + +||.+
T Consensus 89 l~~t~~~~~~~~-~~--~s~vt~~l~~~------~-~gT~l 119 (164)
T 3pu2_A 89 LIHSELYDEDWT-GG--ETLVTLQLLPV------E-GGTEL 119 (164)
T ss_dssp EEEEEBCC---C-CS--CEEEEEEEEEE------T-TEEEE
T ss_pred EEEEEeccCCCC-CC--CEEEEEEEEEc------C-CCEEE
Confidence 446553 22111 11 25677888887 4 56765
No 44
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=97.85 E-value=1.9e-05 Score=54.36 Aligned_cols=96 Identities=11% Similarity=0.090 Sum_probs=59.6
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc--e--eeeEEEeeecCCccEEEEE
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS--T--SMQSRVDALDRDNLYCKYT 78 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t--~--~~kEri~~vDe~~~~~~y~ 78 (115)
..+++.++.|+||++++|++ +.|... +++|.|. .. +++-.+|..-.++ + .+..++..+++ ++.+.|+
T Consensus 8 ~~~i~~~~~i~Ap~e~Vw~a-ltdp~~-~~~W~~~-~~-----~~~~~~Gg~~~~~~~g~~~~~~~v~e~~p-~~~l~~~ 78 (160)
T 2lak_A 8 SFVVRREAHLAAPPAAVFAL-MTDPEK-ILRWMGT-EA-----EVEPEPGGLYLVNVTGARFARGSFREVVP-VHRLAYS 78 (160)
T ss_dssp CCEEEEEEEESSCHHHHHHH-HHCHHH-HHHTSCS-SE-----EESCSTTCCEEECSSTTCCSSCCEEEEET-TTEEEEC
T ss_pred CceEEEEEEeCCCHHHHHHH-hcChHH-HhhhCCC-cc-----eeeccCCCEEEEEEeCCceEEEEEEEEcC-CCEEEEE
Confidence 35789999999999999999 589777 5999986 22 2343444433343 2 35567777776 4455666
Q ss_pred EEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 79 VFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 79 vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
...++.-...-.....++.|+|. + +||.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~------~-~gT~l 107 (160)
T 2lak_A 79 FGWDGSEVVPPGSSLVEIDLIEQ------G-GGTLL 107 (160)
T ss_dssp CCCCSSSCCCTTSCEEEEEEEEC------S-SSEEE
T ss_pred EEecCCCCCCCCcEEEEEEEEEC------C-CCEEE
Confidence 54332100011135567888887 4 46754
No 45
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=97.84 E-value=0.00031 Score=48.55 Aligned_cols=98 Identities=14% Similarity=0.173 Sum_probs=61.2
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccc--eeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCc
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQA--FKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDN 72 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~--v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~ 72 (115)
-.++..+..|+||++++|++| .|... +++|.+.. +. +...++|..+|..-.+. + .+.-++..+++.+
T Consensus 7 ~~~i~~~r~i~Ap~e~Vw~al-tdp~~-~~~W~~~~~~~~-~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~g~v~e~~p~~ 83 (161)
T 3rd6_A 7 HSTFTIERTYPQSPDRVFHAF-ADKAT-VRRWRVDGDGFT-VAEFSFDFRVGGGEVSRFSYGGGPEVRLDAQFQDIVPDQ 83 (161)
T ss_dssp EEEEEEEEEESSCHHHHHHHH-HCHHH-HHHHTCCCCC----CEEEECCSTTCEEEEEECSTTSCCEEEEEEEEEEETTT
T ss_pred CceEEEEEEECCCHHHHHHHh-cCHHH-HhhccCCCCCce-eeEEEEccCcCCEEEEEEECCCCCEEEEEEEEEEEcCCC
Confidence 467888999999999999995 88776 58998532 22 22245665555443332 2 3667788888755
Q ss_pred cEEEEEEEe--cCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 73 LYCKYTVFE--EDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 73 ~~~~y~vie--G~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+ +.|+..- .+. +......++.|+|. + +||.+
T Consensus 84 r-l~~~~~~~~~~~---~~~~s~v~~~l~~~------~-~gT~l 116 (161)
T 3rd6_A 84 R-IVFSYRMAIGPQ---PMSASLTTVELTPS------G-DGTRL 116 (161)
T ss_dssp E-EEEEEEEEETTE---EEEEEEEEEEEEEE------T-TEEEE
T ss_pred E-EEEEEEecCCCC---CCCceEEEEEEEEC------C-CCEEE
Confidence 4 4455431 121 23345578888887 4 46764
No 46
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=97.84 E-value=1.4e-05 Score=54.89 Aligned_cols=80 Identities=13% Similarity=0.046 Sum_probs=53.2
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---eeeeEEEeeecCCccEEEEEEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---TSMQSRVDALDRDNLYCKYTVF 80 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~~~kEri~~vDe~~~~~~y~vi 80 (115)
.+++.++.|+||++++|++ +.|+.. +++|.|. .+++..+|..-.+. +.+.-++..+++.+ .+.|+..
T Consensus 10 ~~i~~~~~i~Ap~e~Vw~a-ltd~~~-~~~W~~~-------~~~~~~~Gg~~~~~~~~g~~~~~v~e~~p~~-~l~~~~~ 79 (152)
T 2kew_A 10 PDITKSITLEAPIQKVWET-VSTSEG-IAKWFMP-------NDFQLKEGQEFHLQSPFGPSPCKVLAVQAPT-ELSFEWD 79 (152)
T ss_dssp CCEEEEEEECSCHHHHHHH-SSSSHH-HHHHHCS-------CCCCSCSSCCBCSSSSCCSCCBEEEEEETTT-EEEEECT
T ss_pred cEEEEEEEECCCHHHHHHH-HhCHHH-HHHhcCC-------CCCCCCCCCEEEEEecCCceEEEEEEEeCCc-EEEEEEc
Confidence 4689999999999999999 589877 5999886 23444455433332 33556677777754 4556543
Q ss_pred ecCccCcceEEEEEEEEEEec
Q 044934 81 EEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 81 eG~~l~~~~~s~~~~i~v~p~ 101 (115)
.+ ....++.|+|.
T Consensus 80 ~~--------~~~~~~~l~~~ 92 (152)
T 2kew_A 80 TE--------GWVVTFQLEDL 92 (152)
T ss_dssp TS--------CCEEEEEEECC
T ss_pred cC--------CEEEEEEEEEC
Confidence 22 23456777887
No 47
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=97.83 E-value=0.00025 Score=48.21 Aligned_cols=90 Identities=6% Similarity=0.083 Sum_probs=57.0
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccc-ccc-ceeeEEEEecCCccccEEEEc-----e----eeeEEEeeecCCcc
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKL-LPQ-AFKSIVYEQGYGEVGSIEVVS-----T----SMQSRVDALDRDNL 73 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~-~P~-~v~sve~~eGdg~~Gsir~~t-----~----~~kEri~~vDe~~~ 73 (115)
++..++.|+||++++|++| .|... +++| .+. .+ .+...++|-.+|.--.+. + .+.-++..+++.+
T Consensus 2 ~i~~~~~i~Ap~e~Vw~al-tdp~~-~~~W~~~p~~~-~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~g~v~e~~p~~- 77 (144)
T 2lgh_A 2 KISIEAHIEQEIEAVWWAW-NDPDC-IARWNAASSDW-HTTGSRVDLVVGGRFCHHMAAKDGSAGFDFTGTFTRVEAPT- 77 (144)
T ss_dssp EEEEEEEESSCHHHHHHHH-HCHHH-HTTSSSCSTTE-EEEEEEECCSTTCEEEEEEEETTSSCEEEEEEEEEEEETTT-
T ss_pred EEEEEEEeCCCHHHHHHHh-CCHHH-HhccCCCCCCc-ccceEEECCCCCCEEEEEEECCCCCceEEeEEEEEEEeCCC-
Confidence 5788999999999999995 88777 5899 652 23 222344565555433332 2 2456777787644
Q ss_pred EEEEEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 74 YCKYTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 74 ~~~y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.+.|+. +| ....++.|+|. +|||.+
T Consensus 78 ~l~~~~-~~--------~~~~~~~l~~~-------~~gT~l 102 (144)
T 2lgh_A 78 RLSFVM-DD--------GREVDVQFASE-------PGGTWV 102 (144)
T ss_dssp EEEEEE-TT--------CCEEEEEEEEE-------TTEEEE
T ss_pred EEEEEe-cC--------CcEEEEEEEEc-------CCCEEE
Confidence 566774 22 14557778887 456754
No 48
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=97.79 E-value=0.0003 Score=49.10 Aligned_cols=100 Identities=12% Similarity=0.006 Sum_probs=59.9
Q ss_pred cEEEEEEEEeccCHHHHHHHHhcccccccccccccc-eeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCcc
Q 044934 3 VLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQA-FKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNL 73 (115)
Q Consensus 3 ~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~-v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~ 73 (115)
-.++..+..++||++++|++| .|... +.+|.+.. --.+...++|..+|..-.+. + .+.-++..+++.++
T Consensus 8 ~~~i~~~r~i~Ap~e~Vw~a~-Tdpe~-l~~W~~~~~~~~~~~~~~d~~~GG~~~~~~~~~~G~~~~~~g~v~ev~p~~r 85 (166)
T 3put_A 8 HTTFVIERRLTAPVARVFRAW-STPES-KRQWFACHGEWVPLEYALDFRPGGTERNYTADTDGLLHAYDARYIDIVPDTR 85 (166)
T ss_dssp EEEEEEEEEESSCHHHHHHHH-HCHHH-HHHHHTCC---CCSEEEECCSTTCEEEEEEECTTSCEEEEEEEEEEEETTTE
T ss_pred cceEEEEEEECCCHHHHHHHh-CCHHH-HHhcCCCCCCceeeEEEeCcccCCEEEEEEECCCCCEEEEEEEEEEEcCCcE
Confidence 357888999999999999995 88776 58898422 11112234565554333332 2 25677888887554
Q ss_pred EEEEEEEe-cCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 74 YCKYTVFE-EDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 74 ~~~y~vie-G~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
. .|+..- .+. .+......++.|+|. +|||.+
T Consensus 86 l-v~t~~~~~~~--~~~~~s~vt~~l~~~-------~~gT~l 117 (166)
T 3put_A 86 I-IYAYEMKLGQ--TRISASLVTVAFDVE-------PSGTRM 117 (166)
T ss_dssp E-EEEEEEEETT--EEEEEEEEEEEEEEC-------SSSEEE
T ss_pred E-EEEEEecCCC--CCCCceEEEEEEEEC-------CCCEEE
Confidence 3 354431 111 122345578888897 456754
No 49
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=97.79 E-value=0.00043 Score=48.49 Aligned_cols=100 Identities=6% Similarity=-0.125 Sum_probs=61.2
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~~ 75 (115)
.++..++.|+||++++|++| .|... +++|.+..=-.+...++|..+|..-.+. + ...-++..+++.++ +
T Consensus 16 ~~i~~~~~i~Ap~e~Vw~a~-tdpe~-~~~W~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~g~v~e~~p~~r-l 92 (175)
T 2lf2_A 16 KTITIKREFAAVRAIVWEAF-TRAEI-LDQWWAPKPWKAKTKSMDFKEGGTWLYAMVGPNGEEHWSICEYAIIKPIER-F 92 (175)
T ss_dssp TEEEEEEEESSCHHHHHHHH-TCHHH-HHHSSSSSSSEEEEEEECCSTTCEEEEEEECSSSCEEEEEEEECCCCSSSE-E
T ss_pred ceEEEEEEEcCCHHHHHHHh-CCHHH-HhhCcCCCCccceEEEEeccCCCEEEEEEECCCCCEEEeEEEEEEEcCCCE-E
Confidence 36888999999999999995 88776 5889653211233445676566543332 1 25678888887654 4
Q ss_pred EEEEEe----cCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 76 KYTVFE----EDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 76 ~y~vie----G~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.|+.-- |.+. ........++.|+|. +|||.+
T Consensus 93 ~~t~~~~~~~g~p~-~~~~~~~v~~~l~~~-------~~gT~l 127 (175)
T 2lf2_A 93 TGKDGFTDASGKLN-TEMPRSNWDMRFIDK-------GEITEV 127 (175)
T ss_dssp EEEEEEESSTTCCC-TTSCCEEEEEEEEEE-------TTEEEE
T ss_pred EEEEEecCCCCCcC-CCCCcEEEEEEEEEC-------CCCEEE
Confidence 455432 2221 111235567888887 456754
No 50
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=97.78 E-value=0.00018 Score=48.92 Aligned_cols=85 Identities=14% Similarity=0.138 Sum_probs=54.3
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccc-cccceeeEEEEecCCccccEEEEc-----e----eeeEEEeeecCCccE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKL-LPQAFKSIVYEQGYGEVGSIEVVS-----T----SMQSRVDALDRDNLY 74 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~-~P~~v~sve~~eGdg~~Gsir~~t-----~----~~kEri~~vDe~~~~ 74 (115)
++..++.|+||++++|++| .|... +++| .|..--.+...++|-.+|..-.+. + .+.-++..+++.+ .
T Consensus 3 ~i~~~~~i~Ap~e~Vw~al-tdpe~-~~~W~~~p~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~g~v~e~~p~~-~ 79 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYW-NEPAH-IMKWCQASPEWHVPAAQNDLKAGGTFTTTMAAKDGSMSFDFGGVYDQVKTND-L 79 (144)
T ss_dssp SEEEEEEECSCHHHHHHHH-HCHHH-HHHHSTTCTTCEEEEEECCCSTTCEEEEEEECTTSSCEEEEEEEEEEEETTT-E
T ss_pred EEEEEEEECCCHHHHHHHH-CCHHH-HhhccCCCCCcccceeEEccCCCCEEEEEEECCCCCceeeeeEEEEEEeCCC-E
Confidence 4678899999999999995 88776 5899 653211233445665555443332 2 2455777787754 4
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEec
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~ 101 (115)
+.|+. .| ....++.|+|.
T Consensus 80 l~~~~-~g--------~~~v~~~l~~~ 97 (144)
T 2l8o_A 80 IEYTI-GD--------GRKVRIVFTHT 97 (144)
T ss_dssp EEEEE-TT--------CCEEEEEEEEC
T ss_pred EEEEe-CC--------CeEEEEEEEEc
Confidence 56774 22 14567888887
No 51
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=97.76 E-value=0.00019 Score=48.98 Aligned_cols=94 Identities=11% Similarity=-0.074 Sum_probs=55.9
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEE--EEecCCccccEEEEc-----e---eeeEEEeeecCCccE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIV--YEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLY 74 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve--~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~ 74 (115)
++..++.|+||++++|++ +.|... +++|.+..--.+. ..++|..+|..-.+. + .+.-++..+|+.++
T Consensus 3 ~i~~~r~i~Ap~e~Vw~a-ltdp~~-~~~W~~~~~~~~~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~g~v~e~~p~~~- 79 (152)
T 3eli_A 3 DLRLEREFAVAPEALFAW-VSDGAK-LLQWWGPEGLHVPADQHDLDFTRLGPWFSVMVNGEGQRYKVSGQVTHVKPPQS- 79 (152)
T ss_dssp EEEEEEEESSCHHHHHHH-TTCHHH-HHHHCSSTTCBCCTTSBCCCCSSSEEEEEEEECTTCCEEEEEEEEEEEETTTE-
T ss_pred eEEEEEEECCCHHHHHHH-HcCHHH-HhhccCCCCcccccceeEEcccCCcEEEEEEECCCCCEEEEEEEEEEEcCCCE-
Confidence 577889999999999999 488776 4888763211111 123454555433222 2 46677888877544
Q ss_pred EEEEEEecCccCcceEEEEEEEEEEec
Q 044934 75 CKYTVFEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 75 ~~y~vieG~~l~~~~~s~~~~i~v~p~ 101 (115)
+.|+....+.-...-.....++.|+|.
T Consensus 80 l~~~~~~~~~~~~~~~~~~v~~~l~~~ 106 (152)
T 3eli_A 80 VGFTWGWHDDDDRRGAESHVMFIVEPC 106 (152)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEECCBC
T ss_pred EEEEEeecCCCCCCCCcEEEEEEEEEC
Confidence 446554322111122345677888887
No 52
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=97.73 E-value=0.00021 Score=48.99 Aligned_cols=88 Identities=16% Similarity=0.170 Sum_probs=56.1
Q ss_pred ccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc----eeeeEEEeeecCCccEEEE
Q 044934 2 GVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS----TSMQSRVDALDRDNLYCKY 77 (115)
Q Consensus 2 ~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t----~~~kEri~~vDe~~~~~~y 77 (115)
...++..++.|+||++++|++| .|... +++|.|. .+++..+|..-.+. ..+.-++..+++.+ .+.|
T Consensus 7 ~~~~i~~~~~i~Ap~e~Vw~al-tdp~~-~~~W~~~-------~~~~~~~Gg~~~~~~~~g~~~~g~v~e~~p~~-~l~~ 76 (151)
T 3q63_A 7 ENRTVVVERQISHPPEKLWRAL-TQPHL-IEEWLMK-------NDFKPAVGHRFNISADWGGVLDCEVLAVEPNK-TLSY 76 (151)
T ss_dssp --CEEEEEEEESSCHHHHHHHH-HCHHH-HHHHSCE-------ECCCSSTTCEEEEECTTSCEEEEEEEEEETTT-EEEE
T ss_pred CCCeEEEEEEeCCCHHHHHHHH-cCHHH-HHhhcCc-------CCCccCCCCEEEEECCCCCEEEEEEEEEeCCC-EEEE
Confidence 3467889999999999999995 88776 5899983 23454566554443 34666777787755 4456
Q ss_pred EEEecC--ccCcceEEEEEEEEEEec
Q 044934 78 TVFEED--CISDILELIVFQIKFGPY 101 (115)
Q Consensus 78 ~vieG~--~l~~~~~s~~~~i~v~p~ 101 (115)
+...++ ..... .-..++.|+|.
T Consensus 77 ~~~~~~~~~~~~~--~s~v~~~l~~~ 100 (151)
T 3q63_A 77 TWNLAHQDPAFDL--RSVVTFTLTPT 100 (151)
T ss_dssp ECBBCCSSTTTCB--CCEEEEEEEEC
T ss_pred EEecCCCCCCCCC--CeEEEEEEEEc
Confidence 654322 21112 23456778887
No 53
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=97.69 E-value=0.00029 Score=48.68 Aligned_cols=93 Identities=10% Similarity=0.064 Sum_probs=58.5
Q ss_pred EEEEEEEEeccCHHHHHHHHhccccccccccccc-ceeeEEEEecCCccccEEEEc-----ee--eeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQ-AFKSIVYEQGYGEVGSIEVVS-----TS--MQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~-~v~sve~~eGdg~~Gsir~~t-----~~--~kEri~~vDe~~~~~ 75 (115)
.++..++.|+||++++|++| .|... +++|.+. .+ .+...++|-.+|..-.+. +. +.-++..+++.++ +
T Consensus 8 ~~i~~~~~i~Ap~e~Vw~a~-tdpe~-~~~W~~p~~~-~~~~~~~d~~~Gg~~~~~~~~~~G~~~~~g~v~e~~p~~r-l 83 (164)
T 2l9p_A 8 NKIIFTRTFSAPINKVFDAY-TKREL-FEQWFHPQDA-SVTVYDFNATKGGSAFYAIQAPQMISYTIAEYLQVDAPYY-I 83 (164)
T ss_dssp SEEEECCEESSCHHHHHHHH-HCHHH-HTTTCCCTTC-EEEEEECCCSTTEEEEEEEEETTEEEEEEEEESCCBTTTE-E
T ss_pred ceEEEEEEeCCCHHHHHHHh-CCHHH-HHhccCCCCc-eeeEEEEeccCCCEEEEEEECCCCCEEEEEEEEEEcCCCE-E
Confidence 46888999999999999995 88776 4888653 22 233455776666543332 22 6778888887654 4
Q ss_pred EEEEEecC----ccCcceEEEEEEEEEEec
Q 044934 76 KYTVFEED----CISDILELIVFQIKFGPY 101 (115)
Q Consensus 76 ~y~vieG~----~l~~~~~s~~~~i~v~p~ 101 (115)
.|+.-.++ +. ........++.|+|.
T Consensus 84 ~~t~~~~~~~g~p~-~~~~~~~v~~~l~~~ 112 (164)
T 2l9p_A 84 EYLDYFATSKGEKD-TSMPGMHITLNFEEV 112 (164)
T ss_dssp EEEEEEEBTTBSCC-SSSCCEEEEEEECCC
T ss_pred EEEEEecCCCCCcc-CCCCceEEEEEEEEC
Confidence 46554321 11 011124567888887
No 54
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=97.67 E-value=0.00063 Score=47.65 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=60.4
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCcccc-EEEE-c---e---eeeEEEeeecCCccEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGS-IEVV-S---T---SMQSRVDALDRDNLYC 75 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gs-ir~~-t---~---~~kEri~~vDe~~~~~ 75 (115)
.++..+..++||++++|++| .|... +.+|.+..--.+...+.|..+|. .+.. . + .+.-++..+++.++ +
T Consensus 13 ~~i~~~r~i~Ap~e~Vw~a~-Tdpe~-l~~W~~p~~~~~~~~~~d~r~GG~~~~~~~~~~G~~~~~~g~~~ev~p~~r-l 89 (168)
T 3uid_A 13 LTLTITAEFAAPVTRIWQIY-ADPRQ-LEKVWGPPSHPATVVDHDLRPGGRVTYFMTGPDGEKYAGYWEITAVDEPHS-F 89 (168)
T ss_dssp TEEEEEEEESSCHHHHHHHH-HSHHH-HHHHHCCTTSCCEEEEECCSTTCEEEEEEECTTSCEEEEEEEEEEEETTTE-E
T ss_pred CEEEEEEEEcCCHHHHHHHh-CCHHH-HhhEeCCCCeeeeEEEEcccCCcEEEEEEECCCCCEEeeEEEEEEEeCCcE-E
Confidence 35788999999999999995 88666 47885432112334556765654 3332 1 2 26677888887554 3
Q ss_pred EEEEE----ecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 76 KYTVF----EEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 76 ~y~vi----eG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.|+-. +|.+. ........++.|+|. +|||.+
T Consensus 90 v~t~~~~~~~g~p~-~~~~~s~vt~~l~~~-------~~gT~l 124 (168)
T 3uid_A 90 SFLDGFADEDFNPN-TDLPVSTNVYTFTEH-------DGGTRA 124 (168)
T ss_dssp EEEEEEECTTSCBC-SSCCCEEEEEEEEEE-------TTEEEE
T ss_pred EEEEeeccCCCCcC-CCCCcEEEEEEEEEC-------CCCEEE
Confidence 45542 23221 111234577888887 467754
No 55
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=97.62 E-value=0.00032 Score=48.53 Aligned_cols=97 Identities=13% Similarity=0.044 Sum_probs=59.0
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccc--eeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCcc
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQA--FKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNL 73 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~--v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~ 73 (115)
.++..+..|+||++++|++| .|... +++|.+.. +. +...++|..+|..-.+. + .+.-++..+++.++
T Consensus 9 ~~i~~~r~i~Ap~e~Vw~al-tdp~~-~~~W~~~~~g~~-~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~g~v~e~~p~~r 85 (162)
T 3q64_A 9 STFIIERLYPAPPSKVFFAL-GNADA-KRRWFTDPDNPM-PGRFEMDFRVGGKEVNAGGPKDGPIHVYTATYQDIVPDQR 85 (162)
T ss_dssp EEEEEEEEESSCHHHHHHHH-HCHHH-HHHHSSCTTSCC-GGGCEECCSTTCEEEEEECCTTSCCEEEEEEEEEEETTTE
T ss_pred ceEEEEEEeCCCHHHHHHHH-CCHHH-HhhcCCCCCCcc-ceEEEECCccCCEEEEEEECCCCCEEEEEEEEEEEcCCCE
Confidence 46888899999999999995 88776 58998542 11 11123454455443332 1 36677788877554
Q ss_pred EEEEEEEe--cCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 74 YCKYTVFE--EDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 74 ~~~y~vie--G~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.|+..- .+. +......++.|+|. + +||.+
T Consensus 86 -l~~~~~~~~~~~---~~~~s~v~~~l~~~------~-~gT~l 117 (162)
T 3q64_A 86 -IVYSYDMLFGET---RISVSLATIQLFAE------G-EGTRL 117 (162)
T ss_dssp -EEEEEEEEETTE---EEEEEEEEEEEEEE------T-TEEEE
T ss_pred -EEEEEEecCCCC---CCCceEEEEEEEEc------C-CCEEE
Confidence 3455431 221 22344578888887 4 46764
No 56
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=97.61 E-value=0.00045 Score=48.22 Aligned_cols=72 Identities=8% Similarity=0.009 Sum_probs=48.6
Q ss_pred EEEEEEEEeccCHHHHHHHHhccccccccccccc-ceeeEEEEecCCccccEEEEc-----e---eeeEEEeeecCCccE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQ-AFKSIVYEQGYGEVGSIEVVS-----T---SMQSRVDALDRDNLY 74 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~-~v~sve~~eGdg~~Gsir~~t-----~---~~kEri~~vDe~~~~ 74 (115)
.++..++.|+||++++|+++ .|... +++|.+. .+. +...++|..+|..-.+. + .+.-++..+++.++
T Consensus 10 ~~i~~~r~i~Ap~e~Vw~al-tdp~~-~~~W~~p~~~~-~~~~~~d~~~Gg~~~~~~~~~~G~~~~~~~~v~e~~p~~r- 85 (178)
T 1xfs_A 10 LDLMLKRELAVPVNLVWRGL-TEPEL-LKKWFVPKPWS-ISDCRVDLRPGGEFYTVMQDPEGNKFPNSGCFLEVTDEKR- 85 (178)
T ss_dssp TEEEEEEEESSCHHHHHHHH-HCHHH-HTTTSSCTTCE-EEEEEECCSTTCEEEEEEECTTCCEEEEEEEEEEEETTTE-
T ss_pred ceEEEEEEecCCHHHHHHHh-CCHHH-HhhCCCCCCee-eeEEEEeeECCcEEEEEEECCCCCEEEEEEEEEEEeCCCE-
Confidence 36788999999999999995 88777 5899653 222 23445666666554443 2 45667888887544
Q ss_pred EEEEE
Q 044934 75 CKYTV 79 (115)
Q Consensus 75 ~~y~v 79 (115)
+.|+.
T Consensus 86 l~~~~ 90 (178)
T 1xfs_A 86 LIWTS 90 (178)
T ss_dssp EEEES
T ss_pred EEEEE
Confidence 45655
No 57
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=97.58 E-value=0.00059 Score=48.74 Aligned_cols=85 Identities=9% Similarity=0.152 Sum_probs=53.8
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---eeeeEEEeeecCCccEEEEEEE
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---TSMQSRVDALDRDNLYCKYTVF 80 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~~~kEri~~vDe~~~~~~y~vi 80 (115)
.++..++.|+||++++|++| .|+.. +++|.|. .... |..+|..-.+. ....-++..+++.+ .+.|+.-
T Consensus 36 ~~i~~~~~i~Ap~e~VW~al-tdp~~-l~~W~~~-~~~~-----d~~~Gg~~~~~~~~~~~~~~v~e~~p~~-rl~~~~~ 106 (184)
T 2nn5_A 36 IYFGTERAISASPQTIWRYL-TETDK-LKQWFPE-LEIG-----ELGVNGFWRFILPDFEETMPFTDYAEEK-YLGVTWD 106 (184)
T ss_dssp EEEEEEEEESSCHHHHHHHH-HCHHH-HHHHCTT-EEEE-----ECSTTCEEEEEETTEEEEEEEEEEETTT-EEEEEET
T ss_pred cEEEEEEEeCCCHHHHHHHH-cCHHH-HHHhCCC-cccc-----ccCCCCEEEEEEeCCCceEEEEEecCCC-EEEEEEc
Confidence 36888999999999999995 89877 5999985 2222 32333332232 13445677777655 4445541
Q ss_pred ecCccCcceEEEEEEEEEEe-cccccccCCCceee
Q 044934 81 EEDCISDILELIVFQIKFGP-YKLKKISSNASCLM 114 (115)
Q Consensus 81 eG~~l~~~~~s~~~~i~v~p-~~~~~~~~~gg~~v 114 (115)
+ ...++.|+| . +|||.+
T Consensus 107 -~---------~~v~~~l~~~~-------~~gT~l 124 (184)
T 2nn5_A 107 -T---------GIIYFDLKEQA-------PHQTLL 124 (184)
T ss_dssp -T---------EEEEEEEEEEE-------TTEEEE
T ss_pred -C---------eEEEEEEEECC-------CCCEEE
Confidence 1 456777888 5 456754
No 58
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=97.35 E-value=0.0013 Score=47.11 Aligned_cols=89 Identities=8% Similarity=0.008 Sum_probs=60.0
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEceeeeEEEeeecCCccEEEEEEEecC
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVSTSMQSRVDALDRDNLYCKYTVFEED 83 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t~~~kEri~~vDe~~~~~~y~vieG~ 83 (115)
.++..+..|++|++++|++| .|... +++|.+.. ++|..+|..-.+.....-++..+++. +.+.|+...++
T Consensus 21 ~~i~~~r~i~Appe~Vw~al-Tdpe~-l~~W~~p~-------~~d~~~Gg~~~~~~~~~g~v~e~~pp-~rl~~tw~~~~ 90 (181)
T 4fpw_A 21 RSIIIRQRYDAPVDEVWSAC-TDPNR-INRWFIEP-------KGDLREGGNFALQGNASGDILRCEPP-RRLTISWVYEG 90 (181)
T ss_dssp EEEEEEEEESSCHHHHHHHH-HCHHH-HHHHSCCE-------ESCCSTTCEEEESSSCEEECCEEETT-TEEEEEEBCTT
T ss_pred ceEEEEEEECCCHHHHHHHH-cChHH-HhhccCCC-------ccCCCCCCEEEEEecCCEEEEEEcCC-cEEEEEEEcCC
Confidence 46788999999999999995 88776 58998742 46666776655552223456667664 45557765443
Q ss_pred ccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 84 CISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 84 ~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
. + ....++.|+|. ++||.+
T Consensus 91 ~---~--~s~vt~~l~~~-------~~gT~L 109 (181)
T 4fpw_A 91 K---P--DSEVELRLSEE-------GDGTLL 109 (181)
T ss_dssp S---C--CEEEEEEEEEE-------TTEEEE
T ss_pred C---C--cEEEEEEEEEC-------CCcEEE
Confidence 1 1 34577888887 467765
No 59
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=97.30 E-value=0.00077 Score=45.51 Aligned_cols=90 Identities=6% Similarity=0.046 Sum_probs=51.7
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-eeeeEEEeeecCCccEEEEEE
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-TSMQSRVDALDRDNLYCKYTV 79 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-~~~kEri~~vDe~~~~~~y~v 79 (115)
|.-.+++.++.|+||++++|++| .|... +++|.+.. .. .|..+|..-.+. +.+.=++..+++.+ .+.|+-
T Consensus 8 m~~~~i~~~~~i~ap~e~Vw~al-tdp~~-~~~W~~~~-~~-----~d~~~Gg~~~~~~G~~~g~v~e~~p~~-~l~~~~ 78 (145)
T 1x53_A 8 IPTCKITLKETFLTSPEELYRVF-TTQEL-VQAFTHAP-AT-----LEADRGGKFHMVDGNVSGEFTDLVPEK-HIVMKW 78 (145)
T ss_dssp CCEEEEEEEEEESSCHHHHHHHT-TCHHH-HHHHSCSC-CB-----CCCSTTCCCBBTTTTEECCEEEEETTT-EEEEEE
T ss_pred ccccEEEEEEEECCCHHHHHHHh-CCHHH-HHHhcCCC-ce-----EECCCCCEEEEECCeeEEEEEEEeCCC-EEEEEE
Confidence 44568899999999999999994 88776 58998642 22 333333221121 22344556666544 445555
Q ss_pred EecCccCcceEEEEEEEEEEec
Q 044934 80 FEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 80 ieG~~l~~~~~s~~~~i~v~p~ 101 (115)
-..+.....+ ...++.|+|.
T Consensus 79 ~~~~~~~~~~--~~v~~~l~~~ 98 (145)
T 1x53_A 79 RFKSWPEGHF--ATITLTFIDK 98 (145)
T ss_dssp EETTSCTTCC--EEEEEECCBC
T ss_pred ecCCCCCCCc--EEEEEEEEEC
Confidence 4333211222 3456667776
No 60
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=97.29 E-value=0.001 Score=47.53 Aligned_cols=87 Identities=6% Similarity=-0.028 Sum_probs=56.3
Q ss_pred CccEEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---e------------------
Q 044934 1 MGVLRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---T------------------ 59 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~------------------ 59 (115)
|...++..++.|++|++++|+++ .|... +++|.|.. ++|-.+|..-.+. .
T Consensus 16 ~~~~~i~~~~~i~Ap~e~Vw~al-tdpe~-~~~W~~~~-------~~d~~~Gg~~~~~~~~~~~~~~~~p~~~~~~g~~~ 86 (191)
T 2k5g_A 16 LDAQSIRFERLLPGPIERVWAWL-ADADK-RARWLAGG-------ELPRQPGQTFELHFNHAALTAETAPARYAQYDRPI 86 (191)
T ss_dssp SCCSSEEEEEEESSSSHHHHHHH-HCHHH-HTTTSCCC-------CCCSSTTCEEEEEECGGGSCCSSCCSSCSGGGSCE
T ss_pred cCCCeEEEEEEeCCCHHHHHHHH-cCHHH-HhhcCCCC-------CCCccCCCEEEEEEcCCccccccCcccccccCCCc
Confidence 34456889999999999999994 88777 59999862 3454555544433 1
Q ss_pred eeeEEEeeecCCccEEEEEEEecCccCcceEEEEEEEEEEec
Q 044934 60 SMQSRVDALDRDNLYCKYTVFEEDCISDILELIVFQIKFGPY 101 (115)
Q Consensus 60 ~~kEri~~vDe~~~~~~y~vieG~~l~~~~~s~~~~i~v~p~ 101 (115)
.+.-++..+|+.+ .+.|+.-.++. .. ....++.++|.
T Consensus 87 ~~~g~v~e~~pp~-rl~~~~~~~~~--~~--~~~v~~~l~~~ 123 (191)
T 2k5g_A 87 VARHTLLRCEPPR-VLALTWGGGAG--EA--PSEVLFELSEA 123 (191)
T ss_dssp EEEEEEEEEETTT-EEEEECCCCSS--SS--CCEEEEEEEEC
T ss_pred eeEEEEEEecCCC-EEEEEeecCCC--CC--CEEEEEEEEEc
Confidence 2566777787655 45566543321 11 23456777887
No 61
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=97.22 E-value=0.0013 Score=45.78 Aligned_cols=95 Identities=13% Similarity=0.102 Sum_probs=55.7
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc-eeeeEEEeeecCCccEEEEEEEec
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS-TSMQSRVDALDRDNLYCKYTVFEE 82 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t-~~~kEri~~vDe~~~~~~y~vieG 82 (115)
.++..+..++||++++|+|| .|... +.+|.+..... .|-.+|..-.+. +.+.=++..+++.++. .|+---.
T Consensus 19 ~~i~~~r~~~ap~e~Vw~A~-Tdpe~-l~~W~~g~~~~-----~d~~~GG~~~~~~G~~~g~v~ev~p~~rl-v~tw~~~ 90 (158)
T 3ni8_A 19 MSFEITEEYYVPPEVLFNAF-TDAYT-LTRLSRGSLAE-----VDLKVGGKFSLFSGSILGEFTEITKPHKI-VEKWKFR 90 (158)
T ss_dssp CCEEEEEEESSCHHHHHHHH-HCHHH-HHHHTTTSCCE-----ECCSTTCEEEETTTTEEEEEEEEETTTEE-EEEEEET
T ss_pred ceEEEEEEECCCHHHHHHHh-cCHHH-HHhhcCCCccE-----EEccCCCEEEEecCCEEEEEEEEeCCcEE-EEEEEec
Confidence 46788899999999999995 88666 58899731222 343444333333 4445566667765443 3433222
Q ss_pred CccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 83 DCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 83 ~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
+.....+ -..++.|+|. .+|||.+
T Consensus 91 ~~~~~~~--s~vt~~l~~~------~~~~T~l 114 (158)
T 3ni8_A 91 DWNECDY--STVTVEFISV------KENHTKL 114 (158)
T ss_dssp TSCSSCC--EEEEEEEEEE------ETTEEEE
T ss_pred CCCCCCc--EEEEEEEEec------CCCCEEE
Confidence 2211222 3467778884 3566754
No 62
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=97.02 E-value=0.011 Score=42.75 Aligned_cols=88 Identities=8% Similarity=0.023 Sum_probs=56.9
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEceeeeEEEeeecCCccEEEEEEEecCc
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVSTSMQSRVDALDRDNLYCKYTVFEEDC 84 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t~~~kEri~~vDe~~~~~~y~vieG~~ 84 (115)
++..+-.+++|+++||+++ .|... +.+|++. .++|-.+|..-.+.....-++..+|+.. .+.|+--..+.
T Consensus 33 ~l~i~R~f~Ap~e~VW~Al-Tdpe~-l~~W~~~-------~~~d~r~GG~~~~~~~~~g~v~ev~pp~-rL~~tw~~~~~ 102 (192)
T 2luz_A 33 SIIIRQRYDAPVDEVWSAC-TDPNR-INRWFIE-------PKGDLREGGNFALQGNASGDILRCEPPR-RLTISWVYEGK 102 (192)
T ss_dssp EEEEEEEESSCHHHHHHHH-HCHHH-HTTTSCC-------EEECCSTTSEEEETTSEEEEEEEEETTT-EEEEEEEESSS
T ss_pred EEEEEEEeCCCHHHHHHHH-cCHHH-HheeeCC-------CcccCccCcEEEeeccccceEEEEecCe-eEEEEEeecCC
Confidence 5777888999999999995 88776 5899874 2466666665555522334566677654 45566433221
Q ss_pred cCcceEEEEEEEEEEecccccccCCCceee
Q 044934 85 ISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 85 l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
.. -..++.++|. ++||.+
T Consensus 103 ---~~--~~vt~~L~~~-------g~gT~L 120 (192)
T 2luz_A 103 ---PD--SEVELRLSEE-------GDGTLL 120 (192)
T ss_dssp ---CE--EEEEEEEEEE-------TTEEEE
T ss_pred ---CC--ceEEEEEEEc-------CCcEEE
Confidence 11 2457888887 456754
No 63
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=96.97 E-value=0.0049 Score=43.18 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=30.4
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSI 42 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sv 42 (115)
..+.+++|++|++++|+. ..|+.+| |.|+|+ ++++
T Consensus 28 ~~~~si~I~ap~eeVy~~-~~D~e~l-P~W~~~-l~~~ 62 (156)
T 2qpv_A 28 SRIIHLSVEKPWAEVYDF-AANPGNM-PRWAAG-LAGG 62 (156)
T ss_dssp EEEEEEEESSCHHHHHHH-HHCGGGG-GGTCGG-GTTC
T ss_pred ceEEEEEEcCCHHHHHHH-HHChhhH-HHHHHh-hhhh
Confidence 468899999999999999 6999995 999997 6554
No 64
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.81 E-value=0.0028 Score=51.24 Aligned_cols=96 Identities=9% Similarity=0.037 Sum_probs=71.6
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCC--ccccEEEEc----eeeeEEE--eeecCCccEEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYG--EVGSIEVVS----TSMQSRV--DALDRDNLYCK 76 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg--~~Gsir~~t----~~~kEri--~~vDe~~~~~~ 76 (115)
+++.+..|++|++++|+-| .|..++ ++|.|. ...++++.++| .+|++- |. ....-++ ..+|+.. .+.
T Consensus 2 ~~~~~~~i~~p~~~v~~~~-~~~~~~-~~~~p~-~~~~~~~~~~~~~~~G~~~-~~~~~~~~w~~~~~~t~~~~~~-~F~ 76 (516)
T 3oh8_A 2 SLTTSHFIPFPREMVWDWH-TRKGAV-ARLTPP-FIPLNPITQAERLADGTTI-FSLPAGLKWVARHDLSGFLNGS-RFT 76 (516)
T ss_dssp CEEEEEEESSCHHHHHHHH-HSTTHH-HHHSCT-TSSCEECSCCSCSSSCEEE-EECSTTCEEEEEECGGGCBTTT-EEE
T ss_pred eEEEEEEccCCHHHHHHHh-cCcchH-HHhCCC-CCceEEecCCCCCcCCeEE-EecCCCcEEEEEEccccccCCC-eEE
Confidence 4778999999999999984 888884 899995 78888885544 678877 76 4556666 7677665 556
Q ss_pred EEEEecCccCcceEEEEEEEEEEecccccccCCCceee
Q 044934 77 YTVFEEDCISDILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 77 y~vieG~~l~~~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
..+..|.+. .|.++..+-.|++. +|||.+
T Consensus 77 d~~~~gp~~--~~~~w~h~h~f~~~-------~~gt~~ 105 (516)
T 3oh8_A 77 DVCLTAPVK--ALANWRHVHNFVDQ-------DGGTLI 105 (516)
T ss_dssp EECCSCSSG--GGSSCEEEEEEEEE-------TTEEEE
T ss_pred EEeccCccc--ceeeeEEEEEEEEc-------CCCcEE
Confidence 777766532 38888888899997 446765
No 65
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=95.61 E-value=0.031 Score=38.22 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=23.1
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccc
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLP 36 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P 36 (115)
..+..+..+++|++++|++| .| . +.+|.+
T Consensus 4 ~~i~~~r~~~Ap~e~Vw~A~-Td--~-l~~W~~ 32 (155)
T 1zxf_A 4 PFVRHSVTVKADRKTAFKTF-LE--G-FPEWWP 32 (155)
T ss_dssp SCEEEEEEESSHHHHHHHHH-TT--C-SSSSSS
T ss_pred ceEEEEEEEeCCHHHHHHHH-Hh--h-HHhhcC
Confidence 35778899999999999996 56 2 477774
No 66
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.23 E-value=0.058 Score=37.05 Aligned_cols=71 Identities=8% Similarity=0.113 Sum_probs=48.0
Q ss_pred CccEEEEEEEEeccCH-HHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc--eeeeEEEeeecCCccEEEE
Q 044934 1 MGVLRFDKDGSVAAAP-SRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS--TSMQSRVDALDRDNLYCKY 77 (115)
Q Consensus 1 m~~~~~~~ei~i~a~a-~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t--~~~kEri~~vDe~~~~~~y 77 (115)
|.-.+++.|+.++||+ +++|++ +.++..| ..|..+.+. ..|+ +.+-.|. +...-+|..+|+.+ .++|
T Consensus 1 m~k~~i~~e~~i~A~~~~~VW~~-IStPegL-~~Wfad~v~----~~g~---~~~F~w~~~~~~~~~v~~~~~~~-~i~F 70 (136)
T 2lio_A 1 MKKEKIHLEYLLNATSKNILWSA-ISTPTGL-EDWFADKVV----SDDK---TVTFCWGKTEQRQAGIVAIRAYS-FIRF 70 (136)
T ss_dssp CCCEEEEEEEEECTTSCTHHHHG-GGSHHHH-TTTSSSEEE----EETT---EEEEESSSSSEEEEEEEEEETTT-EEEE
T ss_pred CCCCcEEEEEEecCChHHHHHHH-hCChhhh-hcccCCCCc----ccCc---eEEEEeCCCCcEeEEEEEEcCCC-EEEE
Confidence 5557899999999999 999999 7888774 789987644 2342 2222444 34456666666654 4556
Q ss_pred EEEe
Q 044934 78 TVFE 81 (115)
Q Consensus 78 ~vie 81 (115)
+=..
T Consensus 71 rW~~ 74 (136)
T 2lio_A 71 HWLD 74 (136)
T ss_dssp EESS
T ss_pred EccC
Confidence 6643
No 67
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=94.47 E-value=0.77 Score=31.72 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=35.3
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCC
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYG 49 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg 49 (115)
..+-.+..+++||+++|++ +.|... .|+|.|. +.++++++-++
T Consensus 27 ~~~k~~~~v~~s~~~v~~~-l~D~~~-~~~W~~~-~~~~~vle~~~ 69 (189)
T 3qsz_A 27 REFRGEVRLKAAADDVVKV-LRDANA-FRQWMPD-VAASELLKATD 69 (189)
T ss_dssp CEEEEEEEESSCHHHHHHH-HHCGGG-GGGTSTT-EEEEEEEEECS
T ss_pred EEEEEEEEEECCHHHHHHH-HHhHHH-hhhHHHh-cCEEEEEeecC
Confidence 4566778889999999999 589887 6999995 88888887643
No 68
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=94.30 E-value=0.91 Score=31.84 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=38.4
Q ss_pred EEEEEEEEec-cCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc
Q 044934 4 LRFDKDGSVA-AAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS 58 (115)
Q Consensus 4 ~~~~~ei~i~-a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t 58 (115)
..+-.+..++ +|++++|++ +.|... .|+|.|. +.++++++-+| ..|..+.
T Consensus 52 ~~~k~~~~i~~~~~~~v~~~-l~d~~~-r~~Wd~~-~~~~~vle~~~--~~i~~~~ 102 (214)
T 1ln1_A 52 YEYKVFGVLEDCSPTLLADI-YMDSDY-RKQWDQY-VKELYEQECNG--ETVVYWE 102 (214)
T ss_dssp EEEEEEEEETTSCHHHHHHH-HHCHHH-HHHHCTT-EEEEEEEEETT--EEEEEEE
T ss_pred EEEEEEEEECCCCHHHHHHH-HcCHHH-HHHHHHH-HhhEEEeccCC--CEEEEEE
Confidence 4567788895 999999999 588765 6999995 88888888766 3455544
No 69
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=94.29 E-value=0.68 Score=32.62 Aligned_cols=61 Identities=8% Similarity=0.039 Sum_probs=42.2
Q ss_pred EEEEEEEeccC---------HHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEc---eeeeEEEeee
Q 044934 5 RFDKDGSVAAA---------PSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVS---TSMQSRVDAL 68 (115)
Q Consensus 5 ~~~~ei~i~a~---------a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t---~~~kEri~~v 68 (115)
++++.++||.| .+++|+-+.....+ -...+| .+.+|++++.++ ..-.|.++ ..+.|++...
T Consensus 2 ~f~htvpIN~p~~p~~p~LTr~QlW~GL~~kar~-p~~Fvp-~i~~c~Vlse~~-~~~~R~l~fg~~~i~e~vtl~ 74 (157)
T 2ffs_A 2 QFEHLVQVNDRTLVDLPVLDRLQLWEGLVCRARE-PQYFVV-GLERFEILVDDG-DRLHRRLYLPGLVVEDEVVLK 74 (157)
T ss_dssp CEEEEEECCCCCC---CCCCHHHHHHHHHHHHHC-GGGTCT-TCCEEEEEEECS-SEEEEEEEETTEEEEEEEEEE
T ss_pred ceeEEEecCCCCCCCCCccCHHHHHHHHHHHhcC-hhhccc-ccCeEEEEecCC-CeEEEEEEECCCccceEEEEc
Confidence 46778888775 36899987655444 123455 699999997753 25568887 6788888743
No 70
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=85.97 E-value=1.5 Score=32.76 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=33.1
Q ss_pred EEEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEec
Q 044934 4 LRFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG 47 (115)
Q Consensus 4 ~~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG 47 (115)
..+-.+..+++||+.+|+.+ .|... .|+|-|. ++++++++-
T Consensus 88 l~~k~~~~v~~~~~~v~~~L-~D~~~-R~~WD~~-~~~~~vle~ 128 (258)
T 3fo5_A 88 LSFHMEMVVHVDAAQAFLLL-SDLRQ-RPEWDKH-YRSVELVQQ 128 (258)
T ss_dssp EEEEEEEEESSCHHHHHHHH-HCGGG-GGGTCTT-CCEEEEEEE
T ss_pred eEEEEEEEEeCCHHHHHHHH-hCchh-HhHhhhh-ccEEEEEEE
Confidence 34566778999999999994 68877 6999995 888888754
No 71
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=82.60 E-value=2.3 Score=30.20 Aligned_cols=40 Identities=20% Similarity=0.237 Sum_probs=31.7
Q ss_pred EEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEec
Q 044934 6 FDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG 47 (115)
Q Consensus 6 ~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG 47 (115)
+-.+..+++|++++|+.+..|... .++|-|. +.+++++|-
T Consensus 57 ~k~~~~v~~~~~~v~~~l~~d~~~-r~~Wd~~-~~~~~vle~ 96 (221)
T 3p0l_A 57 FRLEVVVDQPMERLYEELVERMEA-MGEWNPN-VKEIKVLQK 96 (221)
T ss_dssp EEEEEEESSCHHHHHHHHTTTGGG-TTTSCTT-CSEEEEEEE
T ss_pred EEEEEEEcCCHHHHHHHHHhccch-hhhcCcc-hheEEEEEe
Confidence 445667799999999995457666 6999995 888888876
No 72
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=69.67 E-value=7 Score=27.75 Aligned_cols=39 Identities=5% Similarity=-0.031 Sum_probs=31.3
Q ss_pred EEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEec
Q 044934 6 FDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG 47 (115)
Q Consensus 6 ~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG 47 (115)
+-.+..+++|++++|+.+ .|... .++|-|. +.+++++|-
T Consensus 69 ~k~~~~v~~~~~~v~~~l-~d~~~-r~~Wd~~-~~~~~vle~ 107 (224)
T 1jss_A 69 YKAQGVMDDVVNNVIDHI-RPGPW-RLDWDRL-MTSLDVLEH 107 (224)
T ss_dssp EEEEEEESSCHHHHHHHH-SSSTT-HHHHCSS-EEEEEEEEE
T ss_pred EEEEEEEeCCHHHHHHHH-hCccc-ccccccc-eeeEEEEEE
Confidence 455677899999999995 77655 5999995 888888876
No 73
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=66.10 E-value=7.4 Score=27.56 Aligned_cols=39 Identities=3% Similarity=-0.011 Sum_probs=30.4
Q ss_pred EEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEec
Q 044934 7 DKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG 47 (115)
Q Consensus 7 ~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG 47 (115)
-.+..+++||+++|+.++.|... .++|-|. +.++++++-
T Consensus 69 k~~~~v~~~~~~v~~~~~~d~~~-r~~Wd~~-~~~~~vle~ 107 (229)
T 1em2_A 69 ILKTFLPCPAELVYQEVILQPER-MVLWNKT-VTACQILQR 107 (229)
T ss_dssp EEEEEESSCHHHHHHHTTTCHHH-HTTTCTT-EEEEEEEEE
T ss_pred EEEEEecCCHHHHHHHHHhCccc-hhhcccc-cceEEEEEe
Confidence 34556799999999554578776 6999995 888888876
No 74
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=52.77 E-value=17 Score=25.54 Aligned_cols=40 Identities=10% Similarity=0.018 Sum_probs=29.4
Q ss_pred EEEEEEeccCHHHHHHHHh-cccccccccccccceeeEEEEec
Q 044934 6 FDKDGSVAAAPSRMFKAFV-IDSHNLFPKLLPQAFKSIVYEQG 47 (115)
Q Consensus 6 ~~~ei~i~a~a~k~w~~~~-~d~~~l~pk~~P~~v~sve~~eG 47 (115)
+-.+..++++++++++.+. .|... .++|-+. +.++++++-
T Consensus 69 ~k~~~~v~~~~~~v~~~l~~~d~~~-r~~Wd~~-~~~~~vle~ 109 (231)
T 2r55_A 69 YRGEGIVYGTLEEVWDCVKPAVGGL-RVKWDEN-VTGFEIIQS 109 (231)
T ss_dssp EEEEEEESSCHHHHHHHHCC--CCS-HHHHCTT-CSEEEEEEE
T ss_pred EEEEEEECCCHHHHHHHHHhhCcch-hhhhccc-cceeEEEEE
Confidence 4456677999999999941 36665 6999985 788888876
No 75
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=47.81 E-value=25 Score=25.17 Aligned_cols=46 Identities=7% Similarity=-0.039 Sum_probs=33.0
Q ss_pred EEEe-ccCHHHHHHHHhcccccccccccccceeeEEEEec-CCccccEEEEc
Q 044934 9 DGSV-AAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG-YGEVGSIEVVS 58 (115)
Q Consensus 9 ei~i-~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG-dg~~Gsir~~t 58 (115)
+..+ .++++.+++.+ .|... .|+|-|. +.+++++|- |+ .+.|-.+.
T Consensus 78 ~~~~~~~~~~~v~~~l-~d~~~-r~~Wd~~-~~~~~vle~i~~-~~~i~y~~ 125 (255)
T 2e3n_A 78 THAVKGVTGHEVCNYF-WNVDV-RNDWETT-IENFHVVETLAD-NAIIIYQT 125 (255)
T ss_dssp EEEEETCCHHHHHHHH-HCGGG-HHHHCCS-EEEEEEEEEEET-TEEEEEEE
T ss_pred EEEEcCCCHHHHHHHH-hCcch-Hhhhhhh-cceeEEEEEcCC-CCEEEEEE
Confidence 3444 48999999995 78776 6999995 888898876 43 22454444
No 76
>3ost_A Serine/threonine-protein kinase KCC4; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.69A {Saccharomyces cerevisiae} PDB: 3osm_A
Probab=37.75 E-value=85 Score=21.19 Aligned_cols=66 Identities=14% Similarity=0.304 Sum_probs=45.1
Q ss_pred EEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEecCCccccEEEEceeeeEEEeeecCCccEEEEEEEecCcc
Q 044934 6 FDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQGYGEVGSIEVVSTSMQSRVDALDRDNLYCKYTVFEEDCI 85 (115)
Q Consensus 6 ~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eGdg~~Gsir~~t~~~kEri~~vDe~~~~~~y~vieG~~l 85 (115)
++.++-..+|..++++++ ..||-.|-.--++.+ .+|.++.+++=++-+-+.|
T Consensus 25 ~d~~l~t~v~k~~~~~~L----~~LL~~Wk~yGlkdv------------------------~~D~~~~~ItGrvs~~N~L 76 (128)
T 3ost_A 25 LELEIHAKIPEKRLYEGL----HKLLEGWKQYGLKNL------------------------VFNITNMIITGKLVNDSIL 76 (128)
T ss_dssp CSCCEEESSCHHHHHHHH----HHHHHTCGGGTEEEE------------------------EEETTTTEEEEEECCCCSS
T ss_pred ccEEEEEecCHHHHHHHH----HHHHHHHHHhCccce------------------------EecCCCCEEEEEEcccccc
Confidence 345667778888888774 345566665433333 2778888888888777765
Q ss_pred CcceEEEEEEEEEEec
Q 044934 86 SDILELIVFQIKFGPY 101 (115)
Q Consensus 86 ~~~~~s~~~~i~v~p~ 101 (115)
.+++-.+.+++-|.
T Consensus 77 --~LRsv~F~i~i~~~ 90 (128)
T 3ost_A 77 --FLRSTLFEIMVLPN 90 (128)
T ss_dssp --SCCCEEEEEEEEEC
T ss_pred --ccceeEEEEEEeec
Confidence 67777777777776
No 77
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=37.09 E-value=1.1e+02 Score=21.74 Aligned_cols=98 Identities=11% Similarity=-0.000 Sum_probs=57.4
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEEEEec-CCccccEEEEc----------eeeeEEEe--eecCC
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIVYEQG-YGEVGSIEVVS----------TSMQSRVD--ALDRD 71 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve~~eG-dg~~Gsir~~t----------~~~kEri~--~vDe~ 71 (115)
.+-.+.++++++++++..+..| .++|-|. +.+++++|- |... .|-.+. .++--|-- .+++.
T Consensus 76 ~~K~~~~v~~~~~~v~~~ll~d----r~~Wd~~-~~~~~vle~id~~~-~I~y~~~~~p~p~~~RDfv~~r~~r~~~~~g 149 (237)
T 2pso_A 76 LWKASVEVEAPPSVVLNRVLRE----RHLWDED-FVQWKVVETLDRQT-EIYQYVLNSMAPHPSRDFVVLRTWKTDLPKG 149 (237)
T ss_dssp EEEEEEEESSCHHHHHHHHHHC----GGGTCTT-BCCCEEEEEEETTE-EEEEEEECCSSSCCCEEEEEEEEEESCCGGG
T ss_pred EEEEEEEEcCChHHHHHHHHhh----hhhHHhh-hceEEEEEEcCCCc-EEEEEEecCCCCcCCeEEEEEEEEEEECCCC
Confidence 3566788899999988764566 5899995 778888876 3211 232332 23333322 24556
Q ss_pred ccEEEEEEEecC--ccCc--ceEEEEEEEEEEecccccccCCCceee
Q 044934 72 NLYCKYTVFEED--CISD--ILELIVFQIKFGPYKLKKISSNASCLM 114 (115)
Q Consensus 72 ~~~~~y~vieG~--~l~~--~~~s~~~~i~v~p~~~~~~~~~gg~~v 114 (115)
...+..+-++.+ +... ....+....-+.|. ++++|.+
T Consensus 150 ~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~------~~~~t~v 190 (237)
T 2pso_A 150 MCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPC------GSGKSRL 190 (237)
T ss_dssp CEEEEEEECCCTTCCCCSSEECCEEEEEEEEEEC------STTCEEE
T ss_pred EEEEEEEcccCCCCCCCCcEEEEEeccEEEEEEC------CCCCEEE
Confidence 666666666542 1111 23345566777887 6667754
No 78
>2ejx_A ST0812; arcaea, unknown function, NPPSFA; 1.79A {Sulfolobus tokodaii str}
Probab=34.24 E-value=21 Score=24.55 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=29.8
Q ss_pred EEEEEEEeccCHHHHHHHHhcccccccccccccceeeEE
Q 044934 5 RFDKDGSVAAAPSRMFKAFVIDSHNLFPKLLPQAFKSIV 43 (115)
Q Consensus 5 ~~~~ei~i~a~a~k~w~~~~~d~~~l~pk~~P~~v~sve 43 (115)
.++.++..+-..+.+-.+| .|+.-++|+++|. +++..
T Consensus 6 ~~~~~i~t~hd~~~v~~IL-SDP~F~lp~llp~-~k~~~ 42 (139)
T 2ejx_A 6 KVEKEIKTNQDIDVVMTIF-SDPAFTIPQIFPG-IASIK 42 (139)
T ss_dssp CEEEEEECSSCHHHHHHHH-TCHHHHHHHHSTT-EEEEE
T ss_pred EEEEEeccCCChhheEEEe-cCCceEehhhCCc-EEEEE
Confidence 3566777788899999995 9988889999995 66654
Done!