Query 044936
Match_columns 455
No_of_seqs 183 out of 1631
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 08:16:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044936.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044936hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 7E-68 1.5E-72 523.0 41.7 420 1-450 24-450 (451)
2 PLN02555 limonoid glucosyltran 100.0 2.8E-67 6.1E-72 520.4 42.8 434 1-451 24-470 (480)
3 PLN02173 UDP-glucosyl transfer 100.0 1.5E-66 3.2E-71 511.2 39.9 414 1-449 22-447 (449)
4 PLN02562 UDP-glycosyltransfera 100.0 6E-66 1.3E-70 510.8 41.3 417 1-449 23-448 (448)
5 PLN02207 UDP-glycosyltransfera 100.0 7.3E-66 1.6E-70 508.1 41.3 425 1-451 20-466 (468)
6 PLN02152 indole-3-acetate beta 100.0 1.4E-65 3E-70 505.1 40.2 418 1-448 20-454 (455)
7 PLN02210 UDP-glucosyl transfer 100.0 1.7E-64 3.8E-69 500.8 41.8 418 1-449 25-454 (456)
8 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.7E-64 3.7E-69 502.3 41.2 433 1-451 26-472 (477)
9 PLN02992 coniferyl-alcohol glu 100.0 2.1E-64 4.5E-69 498.6 40.2 414 1-449 22-468 (481)
10 PLN00164 glucosyltransferase; 100.0 3.1E-64 6.8E-69 502.1 40.4 425 1-452 20-475 (480)
11 PLN02534 UDP-glycosyltransfera 100.0 5.6E-64 1.2E-68 497.5 41.1 432 1-451 25-487 (491)
12 PLN03015 UDP-glucosyl transfer 100.0 6.7E-64 1.4E-68 492.1 41.0 423 1-449 20-467 (470)
13 PLN02448 UDP-glycosyltransfera 100.0 2E-63 4.4E-68 496.5 41.5 420 1-452 27-459 (459)
14 PLN02554 UDP-glycosyltransfera 100.0 1.6E-63 3.4E-68 499.0 39.2 428 1-451 19-479 (481)
15 PLN02670 transferase, transfer 100.0 3.3E-63 7.1E-68 489.7 39.2 428 1-452 23-467 (472)
16 PLN03004 UDP-glycosyltransfera 100.0 3.3E-63 7.1E-68 487.8 36.0 414 1-439 20-450 (451)
17 PLN02764 glycosyltransferase f 100.0 9E-62 1.9E-66 475.7 40.5 407 1-452 22-447 (453)
18 PLN02167 UDP-glycosyltransfera 100.0 4.8E-62 1E-66 487.5 37.7 427 1-450 20-472 (475)
19 PLN02208 glycosyltransferase f 100.0 2.1E-61 4.6E-66 475.7 37.9 398 1-450 21-439 (442)
20 PLN03007 UDP-glucosyltransfera 100.0 3.9E-61 8.4E-66 482.4 40.3 431 1-451 22-481 (482)
21 PLN00414 glycosyltransferase f 100.0 1.7E-60 3.6E-65 469.9 38.6 399 1-451 21-441 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.8E-50 3.9E-55 405.9 28.3 314 76-430 124-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 5.3E-53 1.2E-57 431.1 -3.8 379 1-430 16-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 2.6E-42 5.6E-47 352.5 19.5 391 1-429 22-438 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 8.1E-38 1.8E-42 309.5 34.9 363 1-448 12-389 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 2.2E-36 4.9E-41 300.5 19.4 363 1-447 17-400 (401)
27 COG1819 Glycosyl transferases, 100.0 4.6E-33 9.9E-38 272.8 20.3 166 263-451 235-401 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.8 8.4E-18 1.8E-22 161.8 24.2 121 264-408 191-317 (318)
29 PRK12446 undecaprenyldiphospho 99.8 6.6E-17 1.4E-21 156.7 27.3 144 263-422 183-335 (352)
30 TIGR00661 MJ1255 conserved hyp 99.7 1.3E-15 2.8E-20 146.5 23.5 122 264-411 187-314 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.7 5.4E-14 1.2E-18 134.9 26.0 134 264-411 182-324 (357)
32 PRK00726 murG undecaprenyldiph 99.6 2.1E-12 4.5E-17 126.4 27.0 93 326-423 236-334 (357)
33 cd03785 GT1_MurG MurG is an N- 99.5 6.7E-12 1.5E-16 122.4 24.8 90 324-418 234-329 (350)
34 PF04101 Glyco_tran_28_C: Glyc 99.4 2.3E-14 5.1E-19 124.2 -2.6 135 267-411 1-144 (167)
35 TIGR01133 murG undecaprenyldip 99.3 1.5E-09 3.2E-14 105.8 27.0 89 334-430 243-335 (348)
36 TIGR03590 PseG pseudaminic aci 99.2 1.1E-09 2.3E-14 103.0 20.2 103 266-381 171-278 (279)
37 TIGR00215 lpxB lipid-A-disacch 99.2 1.5E-09 3.3E-14 106.8 18.4 169 263-444 189-382 (385)
38 COG4671 Predicted glycosyl tra 99.1 3.2E-08 6.9E-13 91.3 24.3 134 263-410 217-364 (400)
39 TIGR03492 conserved hypothetic 99.1 1.2E-07 2.7E-12 93.5 26.3 141 264-420 204-371 (396)
40 PLN02605 monogalactosyldiacylg 99.0 8.2E-08 1.8E-12 94.8 23.1 96 325-430 265-362 (382)
41 PRK13609 diacylglycerol glucos 99.0 6.1E-08 1.3E-12 95.7 21.8 138 264-419 201-344 (380)
42 cd03814 GT1_like_2 This family 98.9 4E-06 8.7E-11 81.5 30.1 133 266-419 197-338 (364)
43 PRK00025 lpxB lipid-A-disaccha 98.9 1.1E-07 2.4E-12 93.8 18.8 109 336-452 256-378 (380)
44 cd03818 GT1_ExpC_like This fam 98.8 8.3E-06 1.8E-10 81.0 29.8 79 325-411 281-366 (396)
45 cd03800 GT1_Sucrose_synthase T 98.8 1.8E-05 3.9E-10 78.3 31.9 80 324-411 282-368 (398)
46 cd03823 GT1_ExpE7_like This fa 98.8 2.8E-05 6.1E-10 75.3 31.1 132 264-411 189-329 (359)
47 PLN02871 UDP-sulfoquinovose:DA 98.8 2.6E-05 5.5E-10 79.2 31.3 127 266-411 263-400 (465)
48 PRK13608 diacylglycerol glucos 98.7 3E-07 6.5E-12 91.0 15.2 132 264-411 201-338 (391)
49 TIGR03449 mycothiol_MshA UDP-N 98.7 3.5E-05 7.5E-10 76.8 29.7 80 324-411 282-368 (405)
50 TIGR02472 sucr_P_syn_N sucrose 98.7 3.3E-05 7.2E-10 77.8 28.3 97 323-430 315-420 (439)
51 cd03794 GT1_wbuB_like This fam 98.7 4.1E-05 8.9E-10 74.8 28.2 130 264-411 218-365 (394)
52 PRK10307 putative glycosyl tra 98.6 0.00018 3.9E-09 71.8 32.3 81 325-411 284-373 (412)
53 cd03817 GT1_UGDG_like This fam 98.6 0.00013 2.7E-09 71.0 29.7 128 265-411 201-343 (374)
54 PF03033 Glyco_transf_28: Glyc 98.5 2.1E-08 4.6E-13 83.9 1.0 107 1-121 15-133 (139)
55 cd03798 GT1_wlbH_like This fam 98.5 0.00029 6.3E-09 68.2 29.9 81 323-411 257-344 (377)
56 PRK05749 3-deoxy-D-manno-octul 98.5 0.00014 3E-09 73.0 27.0 80 326-411 303-388 (425)
57 cd03795 GT1_like_4 This family 98.5 9.5E-05 2.1E-09 71.8 25.2 129 266-411 191-332 (357)
58 cd03816 GT1_ALG1_like This fam 98.5 0.0002 4.3E-09 71.6 27.9 77 325-411 294-381 (415)
59 cd03805 GT1_ALG2_like This fam 98.5 9.4E-05 2E-09 73.2 25.1 80 323-411 278-364 (392)
60 cd04962 GT1_like_5 This family 98.5 0.0005 1.1E-08 67.3 30.0 80 324-411 252-336 (371)
61 cd03801 GT1_YqgM_like This fam 98.4 0.00059 1.3E-08 65.8 29.5 81 323-411 254-341 (374)
62 cd03808 GT1_cap1E_like This fa 98.4 0.00071 1.5E-08 65.1 29.7 133 264-411 186-329 (359)
63 cd03821 GT1_Bme6_like This fam 98.4 0.00038 8.3E-09 67.5 27.6 79 323-411 260-345 (375)
64 cd03819 GT1_WavL_like This fam 98.4 0.00065 1.4E-08 66.0 28.8 133 264-410 183-329 (355)
65 TIGR02468 sucrsPsyn_pln sucros 98.4 0.001 2.3E-08 71.9 31.6 82 324-411 547-637 (1050)
66 cd05844 GT1_like_7 Glycosyltra 98.4 0.00035 7.5E-09 68.3 26.2 81 323-411 243-336 (367)
67 cd03820 GT1_amsD_like This fam 98.3 0.00047 1E-08 66.1 26.2 88 324-420 234-326 (348)
68 cd03786 GT1_UDP-GlcNAc_2-Epime 98.3 4.6E-05 9.9E-10 74.7 18.6 133 264-411 197-337 (363)
69 TIGR00236 wecB UDP-N-acetylglu 98.3 0.00013 2.7E-09 71.7 21.1 134 266-420 198-341 (365)
70 cd03825 GT1_wcfI_like This fam 98.3 0.00064 1.4E-08 66.2 25.5 81 323-411 242-330 (365)
71 cd03796 GT1_PIG-A_like This fa 98.2 0.001 2.2E-08 66.1 25.9 78 324-411 249-333 (398)
72 PLN00142 sucrose synthase 98.1 0.0051 1.1E-07 65.2 30.0 77 325-409 642-730 (815)
73 cd03799 GT1_amsK_like This is 98.1 0.0028 6E-08 61.4 26.9 81 323-411 234-327 (355)
74 cd03822 GT1_ecORF704_like This 98.1 0.0047 1E-07 59.9 28.4 80 323-411 245-334 (366)
75 cd03802 GT1_AviGT4_like This f 98.1 0.0011 2.4E-08 63.8 22.4 128 268-411 173-308 (335)
76 cd03806 GT1_ALG11_like This fa 98.1 0.004 8.6E-08 62.3 26.3 79 323-411 303-392 (419)
77 PF04007 DUF354: Protein of un 98.0 0.0028 6.2E-08 60.6 23.6 124 264-408 178-307 (335)
78 cd04955 GT1_like_6 This family 98.0 0.0064 1.4E-07 59.1 26.2 124 268-411 195-330 (363)
79 TIGR02470 sucr_synth sucrose s 98.0 0.035 7.6E-07 58.9 32.9 80 324-409 618-707 (784)
80 cd03809 GT1_mtfB_like This fam 97.9 0.0034 7.3E-08 60.9 22.4 87 323-421 251-344 (365)
81 KOG3349 Predicted glycosyltran 97.9 0.00014 3E-09 59.1 9.4 113 266-388 4-128 (170)
82 cd03811 GT1_WabH_like This fam 97.8 0.0037 8E-08 59.8 21.3 77 324-408 245-326 (353)
83 PRK01021 lpxB lipid-A-disaccha 97.8 0.0055 1.2E-07 62.5 21.7 160 263-437 411-595 (608)
84 PF02684 LpxB: Lipid-A-disacch 97.8 0.0061 1.3E-07 59.2 21.3 163 263-440 182-367 (373)
85 PF02350 Epimerase_2: UDP-N-ac 97.7 0.00065 1.4E-08 65.8 13.7 139 263-420 178-325 (346)
86 PLN02949 transferase, transfer 97.7 0.054 1.2E-06 54.8 27.7 80 323-410 333-421 (463)
87 cd03812 GT1_CapH_like This fam 97.7 0.027 5.8E-07 54.6 25.1 86 323-419 247-337 (358)
88 PLN02275 transferase, transfer 97.6 0.045 9.8E-07 53.8 25.0 75 325-409 286-371 (371)
89 PRK15179 Vi polysaccharide bio 97.6 0.14 3E-06 54.2 29.4 94 323-423 572-673 (694)
90 PF13844 Glyco_transf_41: Glyc 97.6 0.0021 4.5E-08 63.8 14.9 154 263-430 282-444 (468)
91 cd04946 GT1_AmsK_like This fam 97.6 0.0031 6.8E-08 62.8 16.3 111 325-445 289-406 (407)
92 COG3980 spsG Spore coat polysa 97.5 0.0017 3.6E-08 59.0 11.4 141 267-423 160-303 (318)
93 PRK15427 colanic acid biosynth 97.4 0.0088 1.9E-07 59.6 17.1 112 323-447 277-402 (406)
94 PRK15484 lipopolysaccharide 1, 97.4 0.017 3.6E-07 57.1 18.8 82 323-411 255-344 (380)
95 PF00534 Glycos_transf_1: Glyc 97.3 0.0066 1.4E-07 52.3 13.6 81 323-411 71-158 (172)
96 cd03804 GT1_wbaZ_like This fam 97.3 0.0013 2.8E-08 64.0 10.0 124 268-411 197-326 (351)
97 PRK09922 UDP-D-galactose:(gluc 97.3 0.003 6.4E-08 61.8 12.1 128 266-411 180-324 (359)
98 PLN02846 digalactosyldiacylgly 97.1 0.15 3.3E-06 51.1 21.7 72 329-411 288-363 (462)
99 TIGR03568 NeuC_NnaA UDP-N-acet 97.1 0.027 5.8E-07 55.2 16.2 129 265-410 201-338 (365)
100 cd03807 GT1_WbnK_like This fam 97.0 0.032 7E-07 53.7 16.0 78 324-411 250-332 (365)
101 COG5017 Uncharacterized conser 97.0 0.0056 1.2E-07 49.0 8.3 105 268-392 2-121 (161)
102 PRK14089 ipid-A-disaccharide s 97.0 0.014 3E-07 56.4 12.6 144 266-427 168-332 (347)
103 TIGR03088 stp2 sugar transfera 96.9 0.021 4.6E-07 56.0 13.8 79 325-411 255-338 (374)
104 PRK09814 beta-1,6-galactofuran 96.7 0.012 2.6E-07 57.0 10.3 112 323-446 205-331 (333)
105 TIGR02149 glgA_Coryne glycogen 96.7 0.049 1.1E-06 53.6 14.9 131 266-411 201-352 (388)
106 cd04951 GT1_WbdM_like This fam 96.6 0.035 7.6E-07 53.8 13.3 85 324-420 244-334 (360)
107 TIGR03087 stp1 sugar transfera 96.6 0.076 1.6E-06 52.7 15.5 78 324-411 279-362 (397)
108 cd04950 GT1_like_1 Glycosyltra 96.5 0.92 2E-05 44.6 29.6 78 324-411 253-340 (373)
109 PF13692 Glyco_trans_1_4: Glyc 96.5 0.016 3.5E-07 47.6 8.1 80 324-411 52-135 (135)
110 cd04949 GT1_gtfA_like This fam 96.4 0.029 6.3E-07 55.0 11.3 84 323-411 259-345 (372)
111 TIGR02918 accessory Sec system 96.1 0.092 2E-06 53.7 13.0 96 324-425 375-482 (500)
112 COG3914 Spy Predicted O-linked 96.0 0.079 1.7E-06 53.1 11.2 133 263-406 427-573 (620)
113 cd03792 GT1_Trehalose_phosphor 95.9 0.24 5.3E-06 48.5 14.6 78 324-411 251-337 (372)
114 COG1519 KdtA 3-deoxy-D-manno-o 95.8 0.3 6.5E-06 47.5 14.1 82 325-411 300-386 (419)
115 PRK15490 Vi polysaccharide bio 95.7 0.57 1.2E-05 47.9 16.2 75 323-405 453-532 (578)
116 cd03813 GT1_like_3 This family 95.6 0.68 1.5E-05 47.2 17.1 86 324-418 353-447 (475)
117 PF06722 DUF1205: Protein of u 95.5 0.032 6.9E-07 42.9 5.2 50 255-304 30-84 (97)
118 TIGR02095 glgA glycogen/starch 95.2 0.28 6.2E-06 49.9 12.8 130 266-410 291-436 (473)
119 PHA01633 putative glycosyl tra 95.2 0.22 4.7E-06 47.9 10.9 85 323-410 199-306 (335)
120 COG0763 LpxB Lipid A disacchar 95.2 3.2 7E-05 40.1 19.1 105 337-448 260-379 (381)
121 PF13579 Glyco_trans_4_4: Glyc 95.1 0.044 9.5E-07 46.0 5.5 93 2-115 8-102 (160)
122 KOG4626 O-linked N-acetylgluco 95.0 0.22 4.8E-06 50.3 10.6 121 263-393 756-888 (966)
123 PRK14098 glycogen synthase; Pr 94.7 0.53 1.1E-05 48.1 12.9 130 267-410 308-450 (489)
124 cd03791 GT1_Glycogen_synthase_ 94.5 0.42 9E-06 48.7 11.7 133 265-410 295-441 (476)
125 PRK10017 colanic acid biosynth 93.9 1.9 4.2E-05 43.0 14.6 100 337-450 323-424 (426)
126 PRK00654 glgA glycogen synthas 92.7 1.8 3.8E-05 44.1 12.6 133 266-410 282-427 (466)
127 PF13524 Glyco_trans_1_2: Glyc 92.1 1.8 4E-05 32.6 9.2 53 350-411 9-62 (92)
128 PF12000 Glyco_trans_4_3: Gkyc 91.0 1.6 3.5E-05 37.4 8.4 92 10-117 1-96 (171)
129 COG0381 WecB UDP-N-acetylgluco 90.4 1.8 4E-05 41.8 9.0 134 264-419 203-347 (383)
130 PF13477 Glyco_trans_4_2: Glyc 89.4 3.7 7.9E-05 33.5 9.4 87 2-114 14-104 (139)
131 PLN02316 synthase/transferase 89.4 11 0.00024 41.8 15.2 105 324-436 899-1019(1036)
132 PRK10125 putative glycosyl tra 89.4 17 0.00038 36.1 15.6 115 268-406 243-366 (405)
133 PLN02939 transferase, transfer 88.1 15 0.00032 40.4 14.6 83 324-410 836-930 (977)
134 TIGR02400 trehalose_OtsA alpha 87.7 6.5 0.00014 39.8 11.4 103 331-449 342-455 (456)
135 PLN02501 digalactosyldiacylgly 87.1 11 0.00025 39.7 12.7 74 327-411 603-681 (794)
136 PHA01630 putative group 1 glyc 87.0 9.6 0.00021 36.7 11.8 77 331-411 196-294 (331)
137 PF06258 Mito_fiss_Elm1: Mitoc 84.9 4.5 9.8E-05 38.6 8.2 59 333-393 220-281 (311)
138 COG4370 Uncharacterized protei 84.4 3.6 7.8E-05 38.3 6.8 90 325-421 294-387 (412)
139 cd03788 GT1_TPS Trehalose-6-Ph 81.8 6.9 0.00015 39.7 8.6 103 330-448 346-459 (460)
140 cd01635 Glycosyltransferase_GT 81.6 8 0.00017 34.0 8.2 49 323-373 159-215 (229)
141 TIGR03713 acc_sec_asp1 accesso 80.4 7.8 0.00017 39.9 8.4 74 325-411 409-488 (519)
142 PF05159 Capsule_synth: Capsul 73.9 12 0.00026 34.8 7.1 42 327-371 185-226 (269)
143 smart00851 MGS MGS-like domain 73.1 29 0.00062 26.0 7.8 27 1-29 2-28 (90)
144 cd03791 GT1_Glycogen_synthase_ 72.8 23 0.00049 36.0 9.5 19 3-21 24-42 (476)
145 TIGR02193 heptsyl_trn_I lipopo 71.9 15 0.00032 35.1 7.5 137 258-409 172-319 (319)
146 TIGR02919 accessory Sec system 70.7 11 0.00023 38.0 6.3 136 263-426 281-425 (438)
147 PF13439 Glyco_transf_4: Glyco 70.7 4.7 0.0001 34.0 3.4 21 2-22 19-39 (177)
148 COG0438 RfaG Glycosyltransfera 70.6 90 0.0019 28.9 15.7 79 325-411 257-342 (381)
149 PRK00654 glgA glycogen synthas 69.9 42 0.00091 34.0 10.6 19 3-21 25-43 (466)
150 PRK14099 glycogen synthase; Pr 69.7 62 0.0013 33.1 11.7 82 324-408 349-441 (485)
151 cd03793 GT1_Glycogen_synthase_ 69.5 16 0.00035 37.8 7.2 74 334-410 467-551 (590)
152 TIGR00715 precor6x_red precorr 67.7 35 0.00077 31.5 8.6 21 3-23 14-34 (256)
153 cd03789 GT1_LPS_heptosyltransf 67.2 19 0.00041 33.5 7.0 95 265-369 121-223 (279)
154 PRK13933 stationary phase surv 67.2 40 0.00086 31.0 8.7 22 2-24 17-38 (253)
155 PF02142 MGS: MGS-like domain 66.7 5.9 0.00013 30.2 2.8 84 1-113 2-94 (95)
156 PF04464 Glyphos_transf: CDP-G 64.4 12 0.00026 36.6 5.2 104 324-438 251-361 (369)
157 TIGR00087 surE 5'/3'-nucleotid 64.0 47 0.001 30.4 8.6 22 2-24 17-38 (244)
158 cd01425 RPS2 Ribosomal protein 62.8 41 0.0009 29.5 7.8 32 88-119 127-160 (193)
159 PRK02797 4-alpha-L-fucosyltran 61.8 1.4E+02 0.0031 28.4 11.2 80 325-409 206-292 (322)
160 cd01635 Glycosyltransferase_GT 61.3 36 0.00078 29.7 7.4 29 88-116 51-82 (229)
161 PLN03063 alpha,alpha-trehalose 60.4 41 0.00089 36.8 8.7 101 332-448 363-475 (797)
162 COG0496 SurE Predicted acid ph 59.6 61 0.0013 29.7 8.3 22 2-24 17-38 (252)
163 PRK13935 stationary phase surv 58.1 70 0.0015 29.4 8.5 21 2-23 17-37 (253)
164 PF05693 Glycogen_syn: Glycoge 56.4 32 0.00069 35.7 6.6 93 333-426 461-565 (633)
165 PRK12311 rpsB 30S ribosomal pr 55.3 28 0.00061 33.3 5.7 34 87-120 151-186 (326)
166 PRK13932 stationary phase surv 55.1 71 0.0015 29.5 8.1 21 2-23 22-42 (257)
167 PRK10964 ADP-heptose:LPS hepto 55.0 41 0.00088 32.1 7.0 132 265-410 178-321 (322)
168 COG0801 FolK 7,8-dihydro-6-hyd 53.1 29 0.00062 29.4 4.8 35 267-301 3-37 (160)
169 COG0052 RpsB Ribosomal protein 52.9 68 0.0015 29.2 7.3 33 88-120 156-190 (252)
170 TIGR02195 heptsyl_trn_II lipop 52.8 62 0.0013 31.0 7.9 96 264-369 173-276 (334)
171 cd01423 MGS_CPS_I_III Methylgl 52.6 56 0.0012 25.8 6.4 82 1-113 15-105 (116)
172 PRK13931 stationary phase surv 52.5 1.5E+02 0.0032 27.5 9.8 97 2-117 17-129 (261)
173 PF00731 AIRC: AIR carboxylase 51.8 1.4E+02 0.0031 25.0 12.5 138 268-430 3-149 (150)
174 PF01075 Glyco_transf_9: Glyco 51.7 29 0.00063 31.5 5.2 98 264-369 104-208 (247)
175 cd00532 MGS-like MGS-like doma 51.3 68 0.0015 25.2 6.6 80 1-114 14-104 (112)
176 COG1090 Predicted nucleoside-d 51.2 1E+02 0.0022 28.7 8.3 19 3-21 13-31 (297)
177 PRK10422 lipopolysaccharide co 50.7 58 0.0013 31.5 7.4 97 265-369 183-287 (352)
178 PRK13934 stationary phase surv 50.5 1.1E+02 0.0023 28.5 8.5 21 2-23 17-37 (266)
179 cd01424 MGS_CPS_II Methylglyox 50.3 92 0.002 24.2 7.2 79 1-114 15-100 (110)
180 cd03792 GT1_Trehalose_phosphor 50.2 38 0.00083 32.9 6.1 21 2-22 19-39 (372)
181 PRK00346 surE 5'(3')-nucleotid 49.9 1.1E+02 0.0024 28.2 8.4 21 2-23 17-37 (250)
182 PF04127 DFP: DNA / pantothena 49.5 18 0.00039 31.5 3.2 21 2-22 33-53 (185)
183 PLN02316 synthase/transferase 49.3 1.8E+02 0.0038 32.8 11.2 20 3-22 612-631 (1036)
184 PRK14501 putative bifunctional 48.4 56 0.0012 35.4 7.4 110 329-450 346-462 (726)
185 TIGR02201 heptsyl_trn_III lipo 48.3 60 0.0013 31.3 7.1 98 264-369 180-285 (344)
186 PRK10916 ADP-heptose:LPS hepto 47.8 74 0.0016 30.7 7.6 96 264-369 179-286 (348)
187 TIGR02398 gluc_glyc_Psyn gluco 47.8 2E+02 0.0043 29.5 10.7 109 328-451 365-483 (487)
188 PF08323 Glyco_transf_5: Starc 45.9 17 0.00038 33.2 2.7 20 3-22 24-43 (245)
189 PF07429 Glyco_transf_56: 4-al 42.7 3.2E+02 0.0069 26.5 10.4 81 325-410 245-332 (360)
190 PF06925 MGDG_synth: Monogalac 40.1 77 0.0017 26.9 5.7 43 73-117 76-124 (169)
191 COG2910 Putative NADH-flavin r 39.7 28 0.00062 30.2 2.8 20 3-22 15-34 (211)
192 COG0859 RfaF ADP-heptose:LPS h 38.5 1E+02 0.0022 29.7 6.9 95 265-369 175-276 (334)
193 cd07025 Peptidase_S66 LD-Carbo 38.0 69 0.0015 30.0 5.5 75 277-372 45-121 (282)
194 PRK12446 undecaprenyldiphospho 37.5 1.5E+02 0.0032 28.8 7.9 98 266-369 3-120 (352)
195 PF00070 Pyr_redox: Pyridine n 37.2 51 0.0011 23.8 3.6 21 2-22 12-32 (80)
196 cd03807 GT1_WbnK_like This fam 37.0 1.6E+02 0.0034 27.6 8.1 21 2-22 19-39 (365)
197 PRK12342 hypothetical protein; 37.0 65 0.0014 29.7 4.9 39 78-118 101-145 (254)
198 PF02951 GSH-S_N: Prokaryotic 36.9 36 0.00079 27.2 2.9 21 2-22 21-41 (119)
199 PF13450 NAD_binding_8: NAD(P) 36.6 44 0.00095 23.5 3.0 19 2-20 9-27 (68)
200 COG1817 Uncharacterized protei 36.5 3.9E+02 0.0084 25.5 19.6 96 3-121 18-116 (346)
201 PRK06718 precorrin-2 dehydroge 36.2 2.4E+02 0.0052 24.9 8.3 147 258-430 5-165 (202)
202 TIGR02095 glgA glycogen/starch 36.1 30 0.00065 35.1 2.9 20 3-22 25-44 (473)
203 PF01975 SurE: Survival protei 35.3 28 0.00062 30.6 2.2 23 2-24 17-39 (196)
204 PF09314 DUF1972: Domain of un 35.0 63 0.0014 28.1 4.3 38 3-49 25-62 (185)
205 PLN02470 acetolactate synthase 34.9 1.5E+02 0.0033 31.1 8.0 92 271-370 2-109 (585)
206 TIGR00725 conserved hypothetic 34.8 1.7E+02 0.0037 24.7 6.8 39 333-371 82-123 (159)
207 KOG1111 N-acetylglucosaminyltr 34.5 3.6E+02 0.0077 26.4 9.3 82 279-369 209-301 (426)
208 PRK09922 UDP-D-galactose:(gluc 34.4 1.4E+02 0.0031 28.7 7.3 21 2-22 21-43 (359)
209 TIGR02195 heptsyl_trn_II lipop 34.4 77 0.0017 30.3 5.3 28 88-117 251-278 (334)
210 PF07355 GRDB: Glycine/sarcosi 34.1 90 0.0019 30.1 5.4 40 74-115 68-117 (349)
211 cd01840 SGNH_hydrolase_yrhL_li 34.0 79 0.0017 26.1 4.7 37 264-301 50-86 (150)
212 PF10083 DUF2321: Uncharacteri 33.1 1.7E+02 0.0036 24.6 6.1 75 368-450 77-151 (158)
213 cd03412 CbiK_N Anaerobic cobal 33.0 81 0.0018 25.5 4.4 36 266-301 2-39 (127)
214 PF09001 DUF1890: Domain of un 32.8 28 0.00062 28.4 1.6 28 2-29 17-44 (139)
215 TIGR01470 cysG_Nterm siroheme 32.2 3.4E+02 0.0074 24.0 8.6 150 258-430 4-165 (205)
216 PF10649 DUF2478: Protein of u 31.9 2.7E+02 0.0058 23.6 7.4 20 2-21 17-36 (159)
217 KOG0853 Glycosyltransferase [C 31.5 26 0.00056 35.5 1.5 57 354-419 380-439 (495)
218 cd04299 GT1_Glycogen_Phosphory 31.3 4.6E+02 0.01 28.7 10.8 175 266-448 477-687 (778)
219 cd01421 IMPCH Inosine monophos 30.4 1.4E+02 0.0031 26.0 5.6 83 1-97 13-100 (187)
220 TIGR00345 arsA arsenite-activa 30.3 1.9E+02 0.0041 27.1 7.1 22 3-24 4-25 (284)
221 PRK03359 putative electron tra 29.6 94 0.002 28.7 4.7 39 78-118 104-148 (256)
222 COG3245 CycB Cytochrome c5 [En 29.4 53 0.0012 26.0 2.5 48 360-409 60-122 (126)
223 COG1797 CobB Cobyrinic acid a, 29.4 1.2E+02 0.0026 30.3 5.5 25 99-123 101-125 (451)
224 COG4081 Uncharacterized protei 29.3 40 0.00088 27.1 1.9 23 2-24 22-44 (148)
225 PRK09620 hypothetical protein; 29.1 55 0.0012 29.6 3.1 20 2-21 33-52 (229)
226 COG0381 WecB UDP-N-acetylgluco 28.3 2.2E+02 0.0048 27.9 7.1 40 74-115 80-122 (383)
227 TIGR01012 Sa_S2_E_A ribosomal 28.1 77 0.0017 27.9 3.7 32 88-119 108-141 (196)
228 PF04558 tRNA_synt_1c_R1: Glut 28.1 79 0.0017 26.9 3.7 24 384-411 109-132 (164)
229 cd07062 Peptidase_S66_mccF_lik 28.0 1.1E+02 0.0023 29.2 5.0 74 278-372 50-125 (308)
230 COG2874 FlaH Predicted ATPases 27.6 1.6E+02 0.0035 26.4 5.5 23 3-25 47-69 (235)
231 TIGR03088 stp2 sugar transfera 27.5 2.1E+02 0.0045 27.6 7.2 86 2-113 21-107 (374)
232 PF10093 DUF2331: Uncharacteri 27.4 2.2E+02 0.0047 27.9 6.9 86 278-368 192-287 (374)
233 PRK14092 2-amino-4-hydroxy-6-h 27.1 1.5E+02 0.0032 25.2 5.1 29 265-293 7-35 (163)
234 PRK09219 xanthine phosphoribos 27.0 1.7E+02 0.0036 25.6 5.6 30 88-117 50-81 (189)
235 PRK04020 rps2P 30S ribosomal p 26.7 84 0.0018 27.9 3.7 32 88-119 114-147 (204)
236 PRK08305 spoVFB dipicolinate s 26.5 66 0.0014 28.3 3.0 23 2-24 23-45 (196)
237 TIGR01918 various_sel_PB selen 26.4 1.5E+02 0.0032 29.5 5.5 40 75-116 65-114 (431)
238 TIGR01917 gly_red_sel_B glycin 26.4 1.4E+02 0.0031 29.5 5.5 40 75-116 65-114 (431)
239 PRK06732 phosphopantothenate-- 26.3 66 0.0014 29.1 3.1 19 2-20 30-48 (229)
240 PF05225 HTH_psq: helix-turn-h 26.0 87 0.0019 20.1 2.7 26 397-423 1-26 (45)
241 PRK03094 hypothetical protein; 26.0 68 0.0015 23.6 2.5 21 1-21 10-30 (80)
242 PF06180 CbiK: Cobalt chelatas 25.9 1E+02 0.0022 28.6 4.3 38 266-303 2-42 (262)
243 cd01141 TroA_d Periplasmic bin 25.7 1.2E+02 0.0025 26.1 4.5 38 76-116 60-99 (186)
244 PHA02754 hypothetical protein; 25.5 1.5E+02 0.0032 20.1 3.7 23 406-430 8-30 (67)
245 PF10163 EnY2: Transcription f 25.4 1.1E+02 0.0023 22.8 3.6 51 397-452 15-65 (86)
246 COG1255 Uncharacterized protei 25.1 66 0.0014 25.5 2.4 20 1-20 25-44 (129)
247 PF01210 NAD_Gly3P_dh_N: NAD-d 25.0 63 0.0014 27.1 2.6 21 2-22 12-32 (157)
248 PF04493 Endonuclease_5: Endon 25.0 1.1E+02 0.0023 27.2 4.1 41 75-115 76-123 (206)
249 PRK10353 3-methyl-adenine DNA 24.8 2.7E+02 0.0058 24.3 6.4 75 368-444 22-119 (187)
250 COG0297 GlgA Glycogen synthase 24.7 3.5E+02 0.0076 27.7 8.1 149 267-432 294-459 (487)
251 COG0003 ArsA Predicted ATPase 24.6 4.4E+02 0.0095 25.3 8.4 22 3-24 21-42 (322)
252 PF03698 UPF0180: Uncharacteri 23.8 78 0.0017 23.3 2.4 21 2-22 11-31 (80)
253 TIGR03029 EpsG chain length de 23.7 3.6E+02 0.0078 24.8 7.7 20 2-21 122-141 (274)
254 TIGR00355 purH phosphoribosyla 23.4 1.6E+02 0.0035 30.0 5.3 84 1-97 13-100 (511)
255 cd07039 TPP_PYR_POX Pyrimidine 23.4 1.6E+02 0.0035 24.9 4.8 27 344-370 64-96 (164)
256 TIGR00313 cobQ cobyric acid sy 23.2 4.4E+02 0.0095 26.9 8.6 30 88-117 122-162 (475)
257 PF03853 YjeF_N: YjeF-related 23.1 92 0.002 26.6 3.2 18 2-19 42-59 (169)
258 PRK13982 bifunctional SbtC-lik 23.1 76 0.0017 32.2 3.1 21 2-22 286-306 (475)
259 TIGR01761 thiaz-red thiazoliny 23.0 3.6E+02 0.0078 26.1 7.6 61 331-391 52-119 (343)
260 COG0041 PurE Phosphoribosylcar 22.8 4.6E+02 0.01 22.1 12.6 137 267-433 4-154 (162)
261 PF10087 DUF2325: Uncharacteri 22.5 2.1E+02 0.0045 21.7 4.8 36 88-123 48-89 (97)
262 PTZ00254 40S ribosomal protein 22.4 1.1E+02 0.0024 28.0 3.7 32 88-119 118-151 (249)
263 cd04951 GT1_WbdM_like This fam 22.4 58 0.0013 31.0 2.1 20 2-21 19-38 (360)
264 COG1066 Sms Predicted ATP-depe 22.3 55 0.0012 32.3 1.8 26 1-27 110-135 (456)
265 COG2085 Predicted dinucleotide 22.0 96 0.0021 27.6 3.1 20 3-22 15-34 (211)
266 PRK00881 purH bifunctional pho 21.9 2.4E+02 0.0052 28.9 6.2 84 1-97 17-105 (513)
267 COG2230 Cfa Cyclopropane fatty 21.7 92 0.002 29.2 3.1 39 351-389 81-121 (283)
268 TIGR00421 ubiX_pad polyprenyl 21.7 1.1E+02 0.0023 26.6 3.4 25 2-26 16-40 (181)
269 cd00550 ArsA_ATPase Oxyanion-t 21.7 2.4E+02 0.0052 25.9 5.9 22 2-23 18-39 (254)
270 COG0300 DltE Short-chain dehyd 21.4 88 0.0019 29.0 2.9 18 3-20 21-38 (265)
271 PF02826 2-Hacid_dh_C: D-isome 21.2 2.4E+02 0.0051 24.2 5.5 66 264-353 36-101 (178)
272 PRK05986 cob(I)alamin adenolsy 21.1 5.4E+02 0.012 22.6 7.6 87 2-99 40-126 (191)
273 PF13460 NAD_binding_10: NADH( 21.0 96 0.0021 26.3 3.0 21 3-23 13-33 (183)
274 PF02016 Peptidase_S66: LD-car 20.9 1.4E+02 0.003 28.0 4.2 74 278-372 46-121 (284)
275 PLN02293 adenine phosphoribosy 20.9 2.8E+02 0.006 24.2 5.8 27 88-114 62-90 (187)
276 cd06559 Endonuclease_V Endonuc 20.9 1.1E+02 0.0023 27.4 3.2 39 76-114 81-126 (208)
277 TIGR01011 rpsB_bact ribosomal 20.7 1.4E+02 0.003 27.0 4.0 33 88-120 155-189 (225)
278 PF08452 DNAP_B_exo_N: DNA pol 20.7 76 0.0017 16.7 1.3 17 254-270 4-20 (22)
279 PRK05299 rpsB 30S ribosomal pr 20.6 1.3E+02 0.0029 27.7 3.9 32 88-119 157-190 (258)
280 PRK08057 cobalt-precorrin-6x r 20.4 1.6E+02 0.0035 27.0 4.4 40 76-117 55-100 (248)
281 COG2861 Uncharacterized protei 20.3 3.3E+02 0.0071 24.8 6.1 39 75-114 137-178 (250)
282 cd01981 Pchlide_reductase_B Pc 20.2 1.4E+02 0.0031 29.8 4.5 33 79-116 363-395 (430)
283 PRK14098 glycogen synthase; Pr 20.1 86 0.0019 32.1 2.8 19 3-21 30-48 (489)
284 PF08030 NAD_binding_6: Ferric 20.0 94 0.002 25.7 2.7 39 266-304 3-46 (156)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=7e-68 Score=523.00 Aligned_cols=420 Identities=31% Similarity=0.581 Sum_probs=327.3
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
|++||+.|+.||+.|||++++.+... .. ...++|+|..+|+++|++.... .....++..+...+.+.+++
T Consensus 24 ~l~LAk~La~~G~~VT~v~T~~n~~~--~~-------~~~~~i~~~~ip~glp~~~~~~-~~~~~~~~~~~~~~~~~~~~ 93 (451)
T PLN02410 24 MMQLAKTLHLKGFSITIAQTKFNYFS--PS-------DDFTDFQFVTIPESLPESDFKN-LGPIEFLHKLNKECQVSFKD 93 (451)
T ss_pred HHHHHHHHHcCCCEEEEEeCcccccc--cc-------cCCCCeEEEeCCCCCCcccccc-cCHHHHHHHHHHHhHHHHHH
Confidence 68999999999999999999877531 11 1113699999999998752212 22345555555566777777
Q ss_pred HHhcC----CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCC-CCCCCCCCCCCccccCCC
Q 044936 81 LLMTP----GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGE-LPVTNEDFDKPVTCIPGL 155 (455)
Q Consensus 81 ll~~~----~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~l~~~ 155 (455)
++++. ..+++|||+|.+++|+.++|+++|||++.|++++++.+..+.+++.....+. .|..... ......+|++
T Consensus 94 ~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iPg~ 172 (451)
T PLN02410 94 CLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPK-GQQNELVPEF 172 (451)
T ss_pred HHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccc-cCccccCCCC
Confidence 77652 2367999999999999999999999999999999999887766444322211 2221100 0112247777
Q ss_pred CccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC-CceeEeCccccccccccccc
Q 044936 156 ENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKSRIQED 234 (455)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~~~~~~~~~ 234 (455)
+. ++.++++.+... ........+... ....+++.+++|||++||+.++++++... +++++|||+++....
T Consensus 173 ~~-~~~~dlp~~~~~--~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~----- 243 (451)
T PLN02410 173 HP-LRCKDFPVSHWA--SLESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASA----- 243 (451)
T ss_pred CC-CChHHCcchhcC--CcHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCC-----
Confidence 66 777777754321 111222222222 23467889999999999999999998765 689999999864211
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCC
Q 044936 235 SAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGP 314 (455)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~ 314 (455)
+ .++++.+++|.+|||++++++||||||||...++.+++.+++.||+.++++|||+++.+..........
T Consensus 244 -----~-----~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~ 313 (451)
T PLN02410 244 -----P-----TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIES 313 (451)
T ss_pred -----C-----ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhc
Confidence 1 122234557999999998899999999999999999999999999999999999998532110011124
Q ss_pred CChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCC
Q 044936 315 VPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (455)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~ 394 (455)
+|++|++++++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.+
T Consensus 314 lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 314 LPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999887899999987
Q ss_pred CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHh
Q 044936 395 TCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRS 450 (455)
Q Consensus 395 ~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 450 (455)
.++.++|+++|+++|. ++++.||++|+++++.+++++++||||++++++||+++..
T Consensus 394 ~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 394 DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 8999999999999997 3467999999999999999999999999999999999863
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.8e-67 Score=520.43 Aligned_cols=434 Identities=30% Similarity=0.522 Sum_probs=336.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCC-CC--ccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDV-TG--FYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLA 77 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~-~~--~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (455)
|+.||+.|+.||..|||++|+.+..++.+.... .. .....+.++|..+|+++|++.. ...++..++..+.+.+.+.
T Consensus 24 ml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~-~~~~~~~~~~~~~~~~~~~ 102 (480)
T PLN02555 24 LLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDP-RRQDLDLYLPQLELVGKRE 102 (480)
T ss_pred HHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCcc-cccCHHHHHHHHHHhhhHH
Confidence 689999999999999999999887766531100 00 0011234788878888877532 2234455666665567888
Q ss_pred HHHHHhcC---CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCC
Q 044936 78 FRRLLMTP---GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPG 154 (455)
Q Consensus 78 l~~ll~~~---~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~ 154 (455)
+++++++. ..+++|||+|.++.|+.++|+++|||.++|++++++.+..+.+++. +..+.......+....+|+
T Consensus 103 l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~iPg 178 (480)
T PLN02555 103 IPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYH----GLVPFPTETEPEIDVQLPC 178 (480)
T ss_pred HHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhh----cCCCcccccCCCceeecCC
Confidence 88888752 2245999999999999999999999999999999999988776532 2222111100111224788
Q ss_pred CCccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccCCceeEeCccccccccccccc
Q 044936 155 LENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQED 234 (455)
Q Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~ 234 (455)
++. ++.+++|.++............+.+......+++.+++|||++||..++++++...| ++.|||++....... .
T Consensus 179 lp~-l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl~~~~~~~~--~ 254 (480)
T PLN02555 179 MPL-LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPLFKMAKTPN--S 254 (480)
T ss_pred CCC-cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcccCcccccc--c
Confidence 877 888889876643222333344455555566778899999999999999999987655 999999975321100 0
Q ss_pred ccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCC
Q 044936 235 SAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGP 314 (455)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~ 314 (455)
... .+.+..+++|++||+++++++||||||||+..++.+++.+++.+|+.++++|||+++............
T Consensus 255 ---~~~-----~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~ 326 (480)
T PLN02555 255 ---DVK-----GDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHV 326 (480)
T ss_pred ---ccc-----ccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhc
Confidence 000 222344567999999998889999999999999999999999999999999999997431100001124
Q ss_pred CChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-
Q 044936 315 VPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK- 393 (455)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~- 393 (455)
+|+++.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|++++++.||+|+.+.
T Consensus 327 lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~ 406 (480)
T PLN02555 327 LPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCR 406 (480)
T ss_pred CChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccC
Confidence 7888888889999999999999999999999999999999999999999999999999999999999988889999992
Q ss_pred -----CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 394 -----DTCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 394 -----~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
+.++.++|.++|+++|. ++++.+|+||++|++++++++++||||++++++||+++..+
T Consensus 407 ~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 407 GEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred CccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 36899999999999996 56789999999999999999999999999999999999865
No 3
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.5e-66 Score=511.20 Aligned_cols=414 Identities=26% Similarity=0.475 Sum_probs=323.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
|++||+.|+.+|+.|||++|+.+..++... ..++|+|..+|+++|++......++..++..+...+.+.+++
T Consensus 22 ~l~lAk~La~~G~~vT~v~t~~~~~~~~~~--------~~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (449)
T PLN02173 22 IRQFCKRLHSKGFKTTHTLTTFIFNTIHLD--------PSSPISIATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVAD 93 (449)
T ss_pred HHHHHHHHHcCCCEEEEEECCchhhhcccC--------CCCCEEEEEcCCCCCCcccccccCHHHHHHHHHHhhhHHHHH
Confidence 689999999999999999999877655331 113699999999998742112334556676666678889999
Q ss_pred HHhcC---CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCCCc
Q 044936 81 LLMTP---GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGLEN 157 (455)
Q Consensus 81 ll~~~---~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~ 157 (455)
++++. ..+++|||+|.+++|+.++|+++|||++.|++++++.+..+++ .... .+ . ....+|+++.
T Consensus 94 ~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~-~~~~-~~-------~---~~~~~pg~p~ 161 (449)
T PLN02173 94 IIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL-SYIN-NG-------S---LTLPIKDLPL 161 (449)
T ss_pred HHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh-HHhc-cC-------C---ccCCCCCCCC
Confidence 98862 2134999999999999999999999999999999888765543 1110 00 0 0112567766
Q ss_pred cccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccCCceeEeCcccccccccccccccC
Q 044936 158 IFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQEDSAE 237 (455)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~ 237 (455)
++.++++.++............+.+.+....+++.+++|||++||++++++++.. ++++.|||+++........
T Consensus 162 -l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~---- 235 (449)
T PLN02173 162 -LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTVPSMYLDQQI---- 235 (449)
T ss_pred -CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccCchhhccccc----
Confidence 7778888766432222233444555566677889999999999999999999765 4799999997531100000
Q ss_pred CCCCCCCCCCCc--ccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCC
Q 044936 238 SSPPESNNCVLS--KEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPV 315 (455)
Q Consensus 238 ~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~ 315 (455)
...+. .+.++| ..+++|.+||+.+++++||||||||+..++.+++.+++.+| ++.+|||+++.+.. ..+
T Consensus 236 ~~~~~-~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~~~------~~l 306 (449)
T PLN02173 236 KSDND-YDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRASEE------SKL 306 (449)
T ss_pred ccccc-ccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEeccch------hcc
Confidence 00000 001233 23456999999998899999999999999999999999999 67889999975311 147
Q ss_pred Chhhhhhc-CCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-
Q 044936 316 PVELDQGT-KERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK- 393 (455)
Q Consensus 316 ~~~~~~~~-~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~- 393 (455)
|+++.+++ ++|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.
T Consensus 307 p~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~ 386 (449)
T PLN02173 307 PPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA 386 (449)
T ss_pred cchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee
Confidence 88888777 5789999999999999999999999999999999999999999999999999999999998789998884
Q ss_pred C----CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 394 D----TCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 394 ~----~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
+ .++.++|.++|+++|. ++++.+|+||+++++++++++++||||++++++||+++.
T Consensus 387 ~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 387 EKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred cccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 2 3699999999999996 556899999999999999999999999999999999985
No 4
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=6e-66 Score=510.81 Aligned_cols=417 Identities=26% Similarity=0.441 Sum_probs=325.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
|+.||+.|+.+|++|||+|++.+.+++.+.. ...++|+|..+|++++++. ..++..++..+...+.+.+++
T Consensus 23 mL~LAk~Las~G~~VT~vtt~~~~~~~~~~~------~~~~~i~~v~lp~g~~~~~---~~~~~~l~~a~~~~~~~~l~~ 93 (448)
T PLN02562 23 MLKLASAFLSRGFEPVVITPEFIHRRISATL------DPKLGITFMSISDGQDDDP---PRDFFSIENSMENTMPPQLER 93 (448)
T ss_pred HHHHHHHHHhCCCEEEEEeCcchhhhhhhcc------CCCCCEEEEECCCCCCCCc---cccHHHHHHHHHHhchHHHHH
Confidence 6899999999999999999998877665431 1123699999998876432 123344444444457888888
Q ss_pred HHhcCC--CCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCC-CCCCCccccCCCCc
Q 044936 81 LLMTPG--RLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNE-DFDKPVTCIPGLEN 157 (455)
Q Consensus 81 ll~~~~--~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~l~~~~~ 157 (455)
++++.. .+++|||+|.++.|+.++|+++|||++.|++++++.+..+.+++.....+..+..+. ........+|+++.
T Consensus 94 ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~ 173 (448)
T PLN02562 94 LLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPL 173 (448)
T ss_pred HHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccccccccccccccCCCCCC
Confidence 888632 146899999999999999999999999999999988877666544322222221110 00112235778776
Q ss_pred cccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhh-----ccCCceeEeCccccccccccc
Q 044936 158 IFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLG-----SRLTKIYTVGPLHALLKSRIQ 232 (455)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~-----~~~p~v~~vGpl~~~~~~~~~ 232 (455)
++.++++.++............+.+..+...+++.+++|||.+||+.++++++ +..|+++.|||++......
T Consensus 174 -l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~-- 250 (448)
T PLN02562 174 -LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATT-- 250 (448)
T ss_pred -CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccc--
Confidence 77788887654321122234445555566677889999999999998888765 3458899999998643210
Q ss_pred ccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCC
Q 044936 233 EDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFI-KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPG 311 (455)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~ 311 (455)
.. +.+.+..+.+|++||+++++++||||||||+. .++.+++++++.+|++++++|||+++.+.
T Consensus 251 ------~~----~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~------ 314 (448)
T PLN02562 251 ------IT----KPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPVW------ 314 (448)
T ss_pred ------cC----CCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCCc------
Confidence 00 01112345678999999988899999999986 67899999999999999999999997531
Q ss_pred CCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeee
Q 044936 312 VGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLD 391 (455)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~ 391 (455)
.+.+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.
T Consensus 315 ~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 394 (448)
T PLN02562 315 REGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVR 394 (448)
T ss_pred hhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeE
Confidence 12478888888999999999999999999999999999999999999999999999999999999999999876899988
Q ss_pred cCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 392 MKDTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 392 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
+ +.++.++|.++|+++|++ ++||+||+++++.++++ ..||||++++++||+++.
T Consensus 395 ~-~~~~~~~l~~~v~~~l~~--~~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 395 I-SGFGQKEVEEGLRKVMED--SGMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred e-CCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 8 568999999999999988 89999999999998887 667999999999999873
No 5
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=7.3e-66 Score=508.05 Aligned_cols=425 Identities=24% Similarity=0.423 Sum_probs=321.1
Q ss_pred CHHHHHHHHhCC--CEEEEEeCCcch-hhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhh---
Q 044936 1 MLTLAELFSHAG--FRVTFVNTEQYH-DRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVS--- 74 (455)
Q Consensus 1 ~l~LA~~L~~rG--h~Vt~~t~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--- 74 (455)
|++||+.|+.|| ..|||++++.+. ..+..... ......++|+|..+|+..+........+....+......+
T Consensus 20 ~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~--~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (468)
T PLN02207 20 FLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVK--SIASSQPFVRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNIPL 97 (468)
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhh--hccCCCCCeEEEEeCCCCCCCccccccCHHHHHHHHHHhcchh
Confidence 589999999998 999999998765 22221100 0011223699999996542111011223333333333334
Q ss_pred -HHHHHHHHhcC---CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhc-CCCCCCCCCCCCCc
Q 044936 75 -KLAFRRLLMTP---GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEE-GELPVTNEDFDKPV 149 (455)
Q Consensus 75 -~~~l~~ll~~~---~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~ 149 (455)
.+.++++++.. ..+++|||+|.+++|+.++|+++|||.+.|++++++.+..+.+++..... ...+.... ...
T Consensus 98 ~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 174 (468)
T PLN02207 98 VRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNS---EEM 174 (468)
T ss_pred HHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccccccCcCCC---CCe
Confidence 44566666542 11459999999999999999999999999999999888877665432111 00110000 122
Q ss_pred cccCCC-CccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhc--cCCceeEeCccccc
Q 044936 150 TCIPGL-ENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGS--RLTKIYTVGPLHAL 226 (455)
Q Consensus 150 ~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~--~~p~v~~vGpl~~~ 226 (455)
..+|++ +. ++..+++.++.... . ...+.+......+++++|+|||++||++++++++. ..|+++.|||+++.
T Consensus 175 ~~vPgl~~~-l~~~dlp~~~~~~~---~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~ 249 (468)
T PLN02207 175 LSIPGFVNP-VPANVLPSALFVED---G-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDL 249 (468)
T ss_pred EECCCCCCC-CChHHCcchhcCCc---c-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccc
Confidence 357887 45 88888887664221 1 23344455566789999999999999999999954 56899999999864
Q ss_pred ccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 044936 227 LKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI 306 (455)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~ 306 (455)
... ..+. .+. ..+++|++|||++++++||||||||...++.+++++++.||+.++++|||+++.+..
T Consensus 250 ~~~--------~~~~----~~~-~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~~ 316 (468)
T PLN02207 250 KAQ--------PHPE----QDL-ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEEV 316 (468)
T ss_pred ccC--------CCCc----ccc-chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 321 1110 011 123579999999988999999999999999999999999999999999999985321
Q ss_pred CCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhc
Q 044936 307 DGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIW 386 (455)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~ 386 (455)
. ....+|++|++++++|+++++|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++.+
T Consensus 317 ~---~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~ 393 (468)
T PLN02207 317 T---NDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKEL 393 (468)
T ss_pred c---ccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHh
Confidence 1 1225889999999999999999999999999999999999999999999999999999999999999999887778
Q ss_pred eeeeecC--------CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 387 KIGLDMK--------DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 387 g~g~~~~--------~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
|+|+.+. +.++.++|.++|+++|++++++||+||+++++++++++++||||++++++||+++..-
T Consensus 394 gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 394 KLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred CceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 9998662 2459999999999999844589999999999999999999999999999999998754
No 6
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.4e-65 Score=505.14 Aligned_cols=418 Identities=27% Similarity=0.454 Sum_probs=321.7
Q ss_pred CHHHHHHHHh-CCCEEEEEeCCcc-hhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHH
Q 044936 1 MLTLAELFSH-AGFRVTFVNTEQY-HDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (455)
Q Consensus 1 ~l~LA~~L~~-rGh~Vt~~t~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (455)
|+.||+.|++ +|+.|||++|+.+ .+.+.... ...++++|..+++++|++......+...++......+.+.+
T Consensus 20 ~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~------~~~~~i~~~~i~dglp~g~~~~~~~~~~~~~~~~~~~~~~l 93 (455)
T PLN02152 20 SLRFARRLIKTTGTRVTFATCLSVIHRSMIPNH------NNVENLSFLTFSDGFDDGVISNTDDVQNRLVNFERNGDKAL 93 (455)
T ss_pred HHHHHHHHhhCCCcEEEEEeccchhhhhhhccC------CCCCCEEEEEcCCCCCCccccccccHHHHHHHHHHhccHHH
Confidence 5899999996 7999999999865 22222210 11236999999999887632223345555666666778888
Q ss_pred HHHHhcC---CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCC
Q 044936 79 RRLLMTP---GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGL 155 (455)
Q Consensus 79 ~~ll~~~---~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~ 155 (455)
++++++. +.+++|||+|.+++|+.++|+++|||++.|++++++.++.++++... . . ....+|++
T Consensus 94 ~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~----~----~-----~~~~iPgl 160 (455)
T PLN02152 94 SDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG----N----N-----SVFEFPNL 160 (455)
T ss_pred HHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc----C----C-----CeeecCCC
Confidence 8888762 22569999999999999999999999999999999998887654321 0 0 12237777
Q ss_pred CccccCCCCCCcccCCCCCchHHHHHHHHhhhhcc--CceEEeccccccchHHHHHhhccCCceeEeCcccccccccccc
Q 044936 156 ENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTR--TSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALLKSRIQE 233 (455)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vlvns~~~le~~~~~~~~~~~p~v~~vGpl~~~~~~~~~~ 233 (455)
+. ++.+++|.++............+.+..+.... ++.+++|||++||+.++++++. .+++.|||+++.......
T Consensus 161 p~-l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~--~~v~~VGPL~~~~~~~~~- 236 (455)
T PLN02152 161 PS-LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN--IEMVAVGPLLPAEIFTGS- 236 (455)
T ss_pred CC-CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc--CCEEEEcccCcccccccc-
Confidence 66 78888888764322222223333344443322 4699999999999999999975 269999999753210000
Q ss_pred cccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC---CC
Q 044936 234 DSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDG---EP 310 (455)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~---~~ 310 (455)
..+ +..+.++.+++|++|||++++++||||||||+..++.+++++++.+|+.++++|||+++.+.... .+
T Consensus 237 ----~~~---~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~ 309 (455)
T PLN02152 237 ----ESG---KDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEG 309 (455)
T ss_pred ----ccC---ccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCccccccccc
Confidence 000 00112234567999999998899999999999999999999999999999999999998532100 00
Q ss_pred C---CCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhce
Q 044936 311 G---VGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (455)
Q Consensus 311 ~---~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g 387 (455)
. ...++++|.++.++|+++.+|+||.+||+|+++|+|||||||||++||+++|||+|++|+++||+.||+++++.||
T Consensus 310 ~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~ 389 (455)
T PLN02152 310 EEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWK 389 (455)
T ss_pred ccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhC
Confidence 0 0124688888899999999999999999999999999999999999999999999999999999999999988777
Q ss_pred eeeecC----CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 044936 388 IGLDMK----DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDI 448 (455)
Q Consensus 388 ~g~~~~----~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 448 (455)
+|+.+. +.++.++|.++|+++|++++..||+||+++++++++++.+||||++++++||+++
T Consensus 390 ~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 390 TGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred ceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 777763 2469999999999999876678999999999999999999999999999999986
No 7
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.7e-64 Score=500.83 Aligned_cols=418 Identities=28% Similarity=0.474 Sum_probs=320.7
Q ss_pred CHHHHHH--HHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHH
Q 044936 1 MLTLAEL--FSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (455)
Q Consensus 1 ~l~LA~~--L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (455)
|+.||++ |++||++|||++++.+.+++.... ...+.+++..+|+++|++.. .+...++..+.+.+.+.+
T Consensus 25 ~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~------~~~~~~~~~~~~~glp~~~~---~~~~~~~~~~~~~~~~~l 95 (456)
T PLN02210 25 MLKLAKHLSLSSKNLHFTLATTEQARDLLSTVE------KPRRPVDLVFFSDGLPKDDP---RAPETLLKSLNKVGAKNL 95 (456)
T ss_pred HHHHHHHHHhhcCCcEEEEEeccchhhhhcccc------CCCCceEEEECCCCCCCCcc---cCHHHHHHHHHHhhhHHH
Confidence 5899999 569999999999998877663321 11346888888888887642 233455555555667788
Q ss_pred HHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCCCcc
Q 044936 79 RRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGLENI 158 (455)
Q Consensus 79 ~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~ 158 (455)
++++++. ++||||+|.++.|+..+|+++|||.+.|+++++..+..+.+++.. ....+... +. .....+|+++.
T Consensus 96 ~~~l~~~--~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~Pgl~~- 168 (456)
T PLN02210 96 SKIIEEK--RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK--TNSFPDLE-DL-NQTVELPALPL- 168 (456)
T ss_pred HHHHhcC--CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--cCCCCccc-cc-CCeeeCCCCCC-
Confidence 8888765 799999999999999999999999999999999988876654321 11111110 00 01123677766
Q ss_pred ccCCCCCCcccCCCCCchHHHHHH-HHhhhhccCceEEeccccccchHHHHHhhccCCceeEeCcccccc--cccccccc
Q 044936 159 FRNRDLPSICRDGGPDDPILQTFI-RDTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALL--KSRIQEDS 235 (455)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~p~v~~vGpl~~~~--~~~~~~~~ 235 (455)
+..++++.++... ......... +.......++.+++|||++||..++++++.. +++++|||+++.. .....+.
T Consensus 169 ~~~~dl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~~~~~~~~~~~~- 244 (456)
T PLN02210 169 LEVRDLPSFMLPS--GGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVSPFLLGDDEEET- 244 (456)
T ss_pred CChhhCChhhhcC--CchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCchhhcCcccccc-
Confidence 7777787655431 112122222 2223446678999999999999999998874 6899999997521 0000000
Q ss_pred cCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCC
Q 044936 236 AESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPV 315 (455)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~ 315 (455)
..+ .+.++|..+++|.+||+++++++||||||||....+.+++++++.||+.++++|||+++.+... ..
T Consensus 245 --~~~---~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~------~~ 313 (456)
T PLN02210 245 --LDG---KNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKA------QN 313 (456)
T ss_pred --ccc---ccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccc------cc
Confidence 000 0013455677899999998889999999999998899999999999999999999999753111 12
Q ss_pred Chhhhhhc-CCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-
Q 044936 316 PVELDQGT-KERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK- 393 (455)
Q Consensus 316 ~~~~~~~~-~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~- 393 (455)
+.++.++. ++|+++++|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+.+.
T Consensus 314 ~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~ 393 (456)
T PLN02210 314 VQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRN 393 (456)
T ss_pred hhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEec
Confidence 34455555 4788888999999999999999999999999999999999999999999999999999987689999985
Q ss_pred ----CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 394 ----DTCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 394 ----~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
+.++.++|.++|+++|. ++|+.+|+||++|++.+++++++||||++++++||+++.
T Consensus 394 ~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 394 DAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred cccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 25899999999999997 446789999999999999999999999999999999875
No 8
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.7e-64 Score=502.32 Aligned_cols=433 Identities=25% Similarity=0.402 Sum_probs=322.1
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC----CCCCCCCCCC---ccCHHHHHHhHhhh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP----DGLPPDNPRF---GIYIKDWFCSDKPV 73 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~l~~~~~~~---~~~~~~~~~~~~~~ 73 (455)
|+.||+.|+.+|++|||++|+.+..++.+.. ...+++++..+| +++|++.... ..+....+......
T Consensus 26 ~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~------~~~~~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~~~ 99 (477)
T PLN02863 26 LLDLTHRLALRGLTITVLVTPKNLPFLNPLL------SKHPSIETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGE 99 (477)
T ss_pred HHHHHHHHHhCCCEEEEEeCCCcHHHHhhhc------ccCCCeeEEeCCCCCcCCCCCCCcChhhcchhhHHHHHHHHHH
Confidence 6899999999999999999999988775531 112357776654 2555543211 11111223333335
Q ss_pred hHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccC
Q 044936 74 SKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIP 153 (455)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 153 (455)
+.+.+.+++++...+++|||+|.+++|+.++|+++|||++.|++++++.+..+.++....+....+. ..........+|
T Consensus 100 ~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iP 178 (477)
T PLN02863 100 LYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPD-DQNEILSFSKIP 178 (477)
T ss_pred hHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccccccccc-ccccccccCCCC
Confidence 6677777777643378999999999999999999999999999999999998877543111100000 000011123478
Q ss_pred CCCccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC--CceeEeCcccccccccc
Q 044936 154 GLENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL--TKIYTVGPLHALLKSRI 231 (455)
Q Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~--p~v~~vGpl~~~~~~~~ 231 (455)
+++. ++.++++.++............+.+.......++.+++|||++||+.++++++..+ ++++.|||+++......
T Consensus 179 g~~~-~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~ 257 (477)
T PLN02863 179 NCPK-YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKS 257 (477)
T ss_pred CCCC-cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccc
Confidence 8777 88888887654322222333334444444456778999999999999999998864 68999999975321000
Q ss_pred cccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCC
Q 044936 232 QEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPG 311 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~ 311 (455)
... .++.+.+..+++|.+||+.+++++||||||||+..++.+++.+++.+|+.++++|||+++.+.... ..
T Consensus 258 ------~~~--~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~-~~ 328 (477)
T PLN02863 258 ------GLM--ERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEE-SD 328 (477)
T ss_pred ------ccc--ccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccc-cc
Confidence 000 000111123457999999998899999999999989999999999999999999999997532110 01
Q ss_pred CCCCChhhhhhcCCCee-EEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeee
Q 044936 312 VGPVPVELDQGTKERGC-IVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGL 390 (455)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~ 390 (455)
...+|++|.+++.++.+ +.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||++++++||+|+
T Consensus 329 ~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~ 408 (477)
T PLN02863 329 YSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAV 408 (477)
T ss_pred hhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeE
Confidence 12478888777765554 45999999999999999999999999999999999999999999999999999877789999
Q ss_pred ecC----CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 391 DMK----DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 391 ~~~----~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
.+. ..++.+++.++|+++|. +++.||+||+++++++++++++||||++++++||+++...
T Consensus 409 ~~~~~~~~~~~~~~v~~~v~~~m~-~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 409 RVCEGADTVPDSDELARVFMESVS-ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred EeccCCCCCcCHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 984 24689999999999995 2389999999999999999999999999999999998754
No 9
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=2.1e-64 Score=498.64 Aligned_cols=414 Identities=29% Similarity=0.479 Sum_probs=318.9
Q ss_pred CHHHHHHHH-hCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCC----CCCCCCCCCccCHHHHHHhHhhhhH
Q 044936 1 MLTLAELFS-HAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPD----GLPPDNPRFGIYIKDWFCSDKPVSK 75 (455)
Q Consensus 1 ~l~LA~~L~-~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~ 75 (455)
|+.||+.|+ ++|++|||++++.+..++..... ..++|++..+|+ ++|+.. .+....+......+.
T Consensus 22 ~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~------~~~~i~~~~lp~p~~~glp~~~----~~~~~~~~~~~~~~~ 91 (481)
T PLN02992 22 VIELGKRLSANHGFHVTVFVLETDAASAQSKFL------NSTGVDIVGLPSPDISGLVDPS----AHVVTKIGVIMREAV 91 (481)
T ss_pred HHHHHHHHHhCCCcEEEEEeCCCchhhhhhccc------cCCCceEEECCCccccCCCCCC----ccHHHHHHHHHHHhH
Confidence 589999998 79999999999988766533211 112588888874 444211 122223333444567
Q ss_pred HHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCC
Q 044936 76 LAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGL 155 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~ 155 (455)
+.+++++++...+++|||+|.++.|+.++|+++|||++.|++++++.++.+.+++..... ...... .......+|++
T Consensus 92 ~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~iPg~ 168 (481)
T PLN02992 92 PTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKD--IKEEHT-VQRKPLAMPGC 168 (481)
T ss_pred HHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccc--cccccc-cCCCCcccCCC
Confidence 888888877433789999999999999999999999999999999888766654432111 000000 00112247777
Q ss_pred CccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhcc-------CCceeEeCccccccc
Q 044936 156 ENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR-------LTKIYTVGPLHALLK 228 (455)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~-------~p~v~~vGpl~~~~~ 228 (455)
+. ++..+++..+.. ........+.+......+++.+++|||++||..++++++.. .++++.|||+++...
T Consensus 169 ~~-l~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~ 245 (481)
T PLN02992 169 EP-VRFEDTLDAYLV--PDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ 245 (481)
T ss_pred Cc-cCHHHhhHhhcC--CCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcC
Confidence 76 777777753332 12223444555555667889999999999999999998752 157999999975311
Q ss_pred ccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 044936 229 SRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDG 308 (455)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~ 308 (455)
+ . ..+++|.+|||++++++||||||||+..++.+++++++.||+.++++|||+++++....
T Consensus 246 -----------~-----~---~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~ 306 (481)
T PLN02992 246 -----------S-----S---KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGS 306 (481)
T ss_pred -----------C-----C---cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 0 1 23456999999998899999999999999999999999999999999999997531100
Q ss_pred --------------CCCCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcc
Q 044936 309 --------------EPGVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIG 373 (455)
Q Consensus 309 --------------~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~ 373 (455)
......+|++|.+++.++++++ +|+||.+||+|+++|+|||||||||++||+++|||||++|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~ 386 (481)
T PLN02992 307 ACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFA 386 (481)
T ss_pred cccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccc
Confidence 0001247889999988877665 9999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhhceeeeecC---CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHH--cCCChHHHHHHHHHH
Q 044936 374 DQQVNSRCVSEIWKIGLDMK---DTCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVK--EGGSSYRNLEKLIED 447 (455)
Q Consensus 374 dq~~na~~~~~~~g~g~~~~---~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~--~gg~~~~~~~~~~~~ 447 (455)
||+.||+++++++|+|+.++ +.++.++|.++|+++|. ++++.+|++|+++++.++++++ +||||.+++++||++
T Consensus 387 DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~ 466 (481)
T PLN02992 387 EQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKE 466 (481)
T ss_pred hhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHH
Confidence 99999999975589999996 25899999999999997 4678999999999999999995 599999999999998
Q ss_pred HH
Q 044936 448 IR 449 (455)
Q Consensus 448 ~~ 449 (455)
+.
T Consensus 467 ~~ 468 (481)
T PLN02992 467 CQ 468 (481)
T ss_pred HH
Confidence 74
No 10
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=3.1e-64 Score=502.11 Aligned_cols=425 Identities=27% Similarity=0.449 Sum_probs=325.4
Q ss_pred CHHHHHHHHhCC----CEEEEEeCCcchh----hhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhh
Q 044936 1 MLTLAELFSHAG----FRVTFVNTEQYHD----RLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKP 72 (455)
Q Consensus 1 ~l~LA~~L~~rG----h~Vt~~t~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 72 (455)
|+.||+.|+.|| +.|||++++.+.. ++..... .......+|+|..+|++.++... .+...++..+..
T Consensus 20 ~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~lp~~~~p~~~---e~~~~~~~~~~~ 94 (480)
T PLN00164 20 MLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVR--REAASGLDIRFHHLPAVEPPTDA---AGVEEFISRYIQ 94 (480)
T ss_pred HHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHh--hcccCCCCEEEEECCCCCCCCcc---ccHHHHHHHHHH
Confidence 689999999997 7999999876532 2222100 00011125999999976432211 123345555566
Q ss_pred hhHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCcccc
Q 044936 73 VSKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCI 152 (455)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 152 (455)
.+.+.++++++....+++|||+|.+++|+.++|+++|||++.|++++++.++.+.+++......-.+... ... ...+
T Consensus 95 ~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~i 171 (480)
T PLN00164 95 LHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEE--MEG-AVDV 171 (480)
T ss_pred hhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccc--cCc-ceec
Confidence 7788888888875336799999999999999999999999999999999988877654321110000111 011 1237
Q ss_pred CCCCccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhcc-------CCceeEeCcccc
Q 044936 153 PGLENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR-------LTKIYTVGPLHA 225 (455)
Q Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~-------~p~v~~vGpl~~ 225 (455)
|+++. ++..++|.++... .......+....+...+++.+++|||++||+.++++++.. .|+++.|||+++
T Consensus 172 PGlp~-l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~ 248 (480)
T PLN00164 172 PGLPP-VPASSLPAPVMDK--KSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVIS 248 (480)
T ss_pred CCCCC-CChHHCCchhcCC--CcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCcc
Confidence 88876 7888888755432 1122333344445567788999999999999999999864 268999999985
Q ss_pred cccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 044936 226 LLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDL 305 (455)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~ 305 (455)
..... . .+..+++|.+|||++++++||||||||+..++.+++.+++.||+.++++|||+++.+.
T Consensus 249 ~~~~~---------------~-~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~ 312 (480)
T PLN00164 249 LAFTP---------------P-AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPP 312 (480)
T ss_pred ccccC---------------C-CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 32110 0 1134567999999998999999999999989999999999999999999999998542
Q ss_pred CC------CCCCCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHH
Q 044936 306 ID------GEPGVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVN 378 (455)
Q Consensus 306 ~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~n 378 (455)
.. ..+....+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~N 392 (480)
T PLN00164 313 AAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLN 392 (480)
T ss_pred ccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhH
Confidence 11 00111247889988888888777 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhceeeeecC-C-----CCCHHHHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 379 SRCVSEIWKIGLDMK-D-----TCDRSTIENLVRDLMDN---KRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 379 a~~~~~~~g~g~~~~-~-----~~~~~~l~~~i~~~l~~---~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
|+++++++|+|+.+. + .++.++|.++|+++|.+ +++.+|++|+++++++++++++||||++++++||+++.
T Consensus 393 a~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~~~ 472 (480)
T PLN00164 393 AFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLAREIR 472 (480)
T ss_pred HHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 998877789999884 1 37999999999999974 47899999999999999999999999999999999998
Q ss_pred hhc
Q 044936 450 SMA 452 (455)
Q Consensus 450 ~~~ 452 (455)
.++
T Consensus 473 ~~~ 475 (480)
T PLN00164 473 HGA 475 (480)
T ss_pred hcc
Confidence 876
No 11
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=5.6e-64 Score=497.48 Aligned_cols=432 Identities=29% Similarity=0.479 Sum_probs=315.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC-----CCCCCCCCCCc--c--CHHHHHHhHh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP-----DGLPPDNPRFG--I--YIKDWFCSDK 71 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~l~~~~~~~~--~--~~~~~~~~~~ 71 (455)
|+.||+.|+.||+.|||++|+.+..++...... ..... ..|+|+.+| +++|++..... . .....+....
T Consensus 25 ~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~-~~~~~-~~i~~~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~ 102 (491)
T PLN02534 25 MIDMARLLAERGVIVSLVTTPQNASRFAKTIDR-ARESG-LPIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV 102 (491)
T ss_pred HHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhh-ccccC-CCeEEEEcCCCCccCCCCCCccccccCCcHHHHHHHHHHH
Confidence 589999999999999999999987766543110 00011 138898887 68877532111 1 1122222333
Q ss_pred hhhHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccc
Q 044936 72 PVSKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTC 151 (455)
Q Consensus 72 ~~~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 151 (455)
..+.+.++++|+....+++|||+|.+++|+.++|+++|||++.|++++++....+..+....+ ..+..... ....
T Consensus 103 ~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~--~~~~~~~~---~~~~ 177 (491)
T PLN02534 103 DKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNA--HLSVSSDS---EPFV 177 (491)
T ss_pred HHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcc--cccCCCCC---ceee
Confidence 456788888888643378999999999999999999999999999999988876543321111 11111110 1123
Q ss_pred cCCCCc--cccCCCCCCcccCCCCCchHHHHHHHHhhh-hccCceEEeccccccchHHHHHhhccC-CceeEeCcccccc
Q 044936 152 IPGLEN--IFRNRDLPSICRDGGPDDPILQTFIRDTSA-TTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALL 227 (455)
Q Consensus 152 l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~~ 227 (455)
+|+++. .++..+++.++.... ....+...+.. ...++.+++|||++||+.++++++... ++++.|||++...
T Consensus 178 iPg~p~~~~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~ 253 (491)
T PLN02534 178 VPGMPQSIEITRAQLPGAFVSLP----DLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCN 253 (491)
T ss_pred cCCCCccccccHHHCChhhcCcc----cHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccc
Confidence 566552 155566665432211 12222322222 235679999999999999999998765 6899999997532
Q ss_pred cccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCC
Q 044936 228 KSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLID 307 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~ 307 (455)
.... + ... .+.....++++|++|||++++++||||||||...+..+++.+++.||+.++++|||+++.+...
T Consensus 254 ~~~~--~---~~~---~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~ 325 (491)
T PLN02534 254 KRNL--D---KFE---RGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKH 325 (491)
T ss_pred cccc--c---ccc---cCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccc
Confidence 1100 0 000 0000001235699999999889999999999999999999999999999999999999853111
Q ss_pred CCCCCCCCChhhhhhcC-CCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhc
Q 044936 308 GEPGVGPVPVELDQGTK-ERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIW 386 (455)
Q Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~ 386 (455)
.......+|++|.+++. .++++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|++++++.|
T Consensus 326 ~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~ 405 (491)
T PLN02534 326 SELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVL 405 (491)
T ss_pred cchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhh
Confidence 00011136788887754 44555699999999999999999999999999999999999999999999999999999889
Q ss_pred eeeeecC-------------C-CCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 387 KIGLDMK-------------D-TCDRSTIENLVRDLMD---NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 387 g~g~~~~-------------~-~~~~~~l~~~i~~~l~---~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
|+|+.+. + .+++++|.++|+++|. ++|+.+|+||++|++++++++++||||++++++||+++.
T Consensus 406 ~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~ 485 (491)
T PLN02534 406 RIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVL 485 (491)
T ss_pred cceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 9999873 0 3789999999999995 567899999999999999999999999999999999997
Q ss_pred hh
Q 044936 450 SM 451 (455)
Q Consensus 450 ~~ 451 (455)
..
T Consensus 486 ~~ 487 (491)
T PLN02534 486 KQ 487 (491)
T ss_pred HH
Confidence 54
No 12
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=6.7e-64 Score=492.10 Aligned_cols=423 Identities=24% Similarity=0.381 Sum_probs=321.7
Q ss_pred CHHHHHHHHhC-CCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHH
Q 044936 1 MLTLAELFSHA-GFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFR 79 (455)
Q Consensus 1 ~l~LA~~L~~r-Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (455)
|++||+.|+++ |..|||++++.+..++...... ......++|++..+|+...++......+....+....+.+.+.++
T Consensus 20 ~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~-~~~~~~~~i~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 98 (470)
T PLN03015 20 ILELGNRLSSVLNIHVTILAVTSGSSSPTETEAI-HAAAARTTCQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVR 98 (470)
T ss_pred HHHHHHHHHhCCCCeEEEEECCCchhhhcccccc-ccccCCCceEEEECCCCccccCCCCCccHHHHHHHHHHhchHHHH
Confidence 58999999987 9999999988766544211110 000011359999998533222100011333333444456888999
Q ss_pred HHHhcCCCCCcEEEECCCcchhHHHHHHcCCC-eEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCCCcc
Q 044936 80 RLLMTPGRLPTCIISDSIMSFTIDVAEELNIP-IITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGLENI 158 (455)
Q Consensus 80 ~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP-~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~ 158 (455)
+++++...+++|||+|.++.|+.++|+++||| .+.|++++++....+.+++.... ..+........ ...+|+++.
T Consensus 99 ~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~--~~~~~~~~~~~-~~~vPg~p~- 174 (470)
T PLN03015 99 DAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT--VVEGEYVDIKE-PLKIPGCKP- 174 (470)
T ss_pred HHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc--ccccccCCCCC-eeeCCCCCC-
Confidence 99987544789999999999999999999999 58888888887767666544211 11110001111 124788877
Q ss_pred ccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhcc-------CCceeEeCcccccccccc
Q 044936 159 FRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR-------LTKIYTVGPLHALLKSRI 231 (455)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~-------~p~v~~vGpl~~~~~~~~ 231 (455)
++..+++..+... .......+.+......+++.+++|||++||+.++++++.. .++++.|||++...
T Consensus 175 l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~---- 248 (470)
T PLN03015 175 VGPKELMETMLDR--SDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTN---- 248 (470)
T ss_pred CChHHCCHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCc----
Confidence 8888888654321 1222333444555567899999999999999999999864 25699999998421
Q ss_pred cccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCC-----
Q 044936 232 QEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI----- 306 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~----- 306 (455)
.. . ..+++|++|||++++++||||||||...++.+++.+++.+|+.++++|||+++.+..
T Consensus 249 -------~~-----~---~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~ 313 (470)
T PLN03015 249 -------VH-----V---EKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLGAS 313 (470)
T ss_pred -------cc-----c---cchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccccc
Confidence 11 0 123469999999989999999999999999999999999999999999999975321
Q ss_pred --CCCCCCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhh
Q 044936 307 --DGEPGVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVS 383 (455)
Q Consensus 307 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~ 383 (455)
+.......+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 314 ~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~ 393 (470)
T PLN03015 314 SSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLT 393 (470)
T ss_pred cccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHH
Confidence 000011258899999998888765 99999999999999999999999999999999999999999999999999997
Q ss_pred hhceeeeecC-----CCCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 384 EIWKIGLDMK-----DTCDRSTIENLVRDLMD---NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 384 ~~~g~g~~~~-----~~~~~~~l~~~i~~~l~---~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
+++|+|+.+. +.++.++|.++|+++|. ++|+.+|+||+++++++++++++||||++++++|++++.
T Consensus 394 ~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 394 EEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 7799999994 36899999999999994 578999999999999999999999999999999998864
No 13
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2e-63 Score=496.48 Aligned_cols=420 Identities=32% Similarity=0.562 Sum_probs=326.1
Q ss_pred CHHHHHHHHhC--CCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHH
Q 044936 1 MLTLAELFSHA--GFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (455)
Q Consensus 1 ~l~LA~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (455)
|++||++|++| ||+|||++++.+..++.+... .++++|..+|+++|++.. ...+...++..+...+.+.+
T Consensus 27 ~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~-------~~gi~fv~lp~~~p~~~~-~~~~~~~~~~~~~~~~~~~~ 98 (459)
T PLN02448 27 MMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK-------PDNIRFATIPNVIPSELV-RAADFPGFLEAVMTKMEAPF 98 (459)
T ss_pred HHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC-------CCCEEEEECCCCCCCccc-cccCHHHHHHHHHHHhHHHH
Confidence 58999999999 999999999998887766411 247999999987766532 22345555555555677888
Q ss_pred HHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCC-CCCCccccCCCCc
Q 044936 79 RRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNED-FDKPVTCIPGLEN 157 (455)
Q Consensus 79 ~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~l~~~~~ 157 (455)
++++++...++||||+|.++.|+..+|+++|||++.|+++++..++.+.+++.....+..|..... .......+|+++.
T Consensus 99 ~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~ 178 (459)
T PLN02448 99 EQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSS 178 (459)
T ss_pred HHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCC
Confidence 888887434789999999999999999999999999999999887777665433222222221110 0112334777766
Q ss_pred cccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC-CceeEeCccccccccccccccc
Q 044936 158 IFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKSRIQEDSA 236 (455)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~~~~~~~~~~~ 236 (455)
+...+++.++... .....+.+.+.+....+++.+++|||++||+.++++++... ++++.|||+.+.....
T Consensus 179 -l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~------ 249 (459)
T PLN02448 179 -TRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELK------ 249 (459)
T ss_pred -CChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccC------
Confidence 7777777654321 22234445555555667789999999999999999998765 5899999997532110
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCC
Q 044936 237 ESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVP 316 (455)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~ 316 (455)
... . +......+.+|.+||+.+++++||||||||+...+.+++++++.+|+.++++|||+++.+ .
T Consensus 250 -~~~--~-~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----------~ 314 (459)
T PLN02448 250 -DNS--S-SSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE-----------A 314 (459)
T ss_pred -CCc--c-ccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc-----------h
Confidence 000 0 000001234789999998889999999999988889999999999999999999988532 1
Q ss_pred hhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC---
Q 044936 317 VELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK--- 393 (455)
Q Consensus 317 ~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~--- 393 (455)
.++.++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+.
T Consensus 315 ~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 315 SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred hhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc
Confidence 23434455789999999999999999999999999999999999999999999999999999999988778888874
Q ss_pred ---CCCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhc
Q 044936 394 ---DTCDRSTIENLVRDLMD---NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSMA 452 (455)
Q Consensus 394 ---~~~~~~~l~~~i~~~l~---~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 452 (455)
+.+++++|+++|+++|. ++++.||+||+++++++++++++||||++++++||+++..+|
T Consensus 395 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~~ 459 (459)
T PLN02448 395 GEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQGR 459 (459)
T ss_pred ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccC
Confidence 25799999999999996 357799999999999999999999999999999999998764
No 14
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.6e-63 Score=498.98 Aligned_cols=428 Identities=26% Similarity=0.424 Sum_probs=318.6
Q ss_pred CHHHHHHHHhCC--CEEEEEeCCcchhhhcC-CCCCCCcc-CCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHH
Q 044936 1 MLTLAELFSHAG--FRVTFVNTEQYHDRLLG-NTDVTGFY-KRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKL 76 (455)
Q Consensus 1 ~l~LA~~L~~rG--h~Vt~~t~~~~~~~~~~-~~~~~~~~-~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 76 (455)
|++||+.|+.|| ..|||++|+.+..++.. ........ ...++|+|+.+|++.++.. .. ..+..++..+...+.+
T Consensus 19 ~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~-~~-~~~~~~~~~~~~~~~~ 96 (481)
T PLN02554 19 TVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTT-ED-PTFQSYIDNQKPKVRD 96 (481)
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcc-cc-hHHHHHHHHHHHHHHH
Confidence 689999999999 88999999887653321 10000000 1123699999987664321 11 1333334444444555
Q ss_pred HHHHHHhcC----CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCcccc
Q 044936 77 AFRRLLMTP----GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCI 152 (455)
Q Consensus 77 ~l~~ll~~~----~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 152 (455)
.+++++... ..+++|||+|.++.|+.++|+++|||++.|++++++.++.+.+++......-.+..+.........+
T Consensus 97 ~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 176 (481)
T PLN02554 97 AVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDV 176 (481)
T ss_pred HHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeEC
Confidence 556665431 1134899999999999999999999999999999999988877654321110110110000012237
Q ss_pred CCCC-ccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhc---cCCceeEeCccccccc
Q 044936 153 PGLE-NIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGS---RLTKIYTVGPLHALLK 228 (455)
Q Consensus 153 ~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~---~~p~v~~vGpl~~~~~ 228 (455)
|++. . ++..++|.++.. ..+...+.+......+++.+++||+.+||..+++.++. ..|+++.|||++....
T Consensus 177 Pgl~~p-l~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~ 251 (481)
T PLN02554 177 PSLTRP-YPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLEN 251 (481)
T ss_pred CCCCCC-CCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccc
Confidence 7774 4 677778765432 12334445555666788999999999999999998875 4578999999953211
Q ss_pred ccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCC
Q 044936 229 SRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDG 308 (455)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~ 308 (455)
.. . . .. ...+++|.+||+++++++||||||||+..++.+++++++.||+.++++|||+++.+....
T Consensus 252 ~~-------~-~-----~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~ 317 (481)
T PLN02554 252 SG-------D-D-----SK-DEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNI 317 (481)
T ss_pred cc-------c-c-----cc-cccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccc
Confidence 10 0 0 00 123457999999988889999999999888999999999999999999999997532100
Q ss_pred --C--C----CCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHH
Q 044936 309 --E--P----GVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSR 380 (455)
Q Consensus 309 --~--~----~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~ 380 (455)
. + ....+|++|.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+
T Consensus 318 ~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~ 397 (481)
T PLN02554 318 MKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAF 397 (481)
T ss_pred cccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHH
Confidence 0 0 0113688999899999999999999999999999999999999999999999999999999999999997
Q ss_pred HhhhhceeeeecC------------CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 044936 381 CVSEIWKIGLDMK------------DTCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIED 447 (455)
Q Consensus 381 ~~~~~~g~g~~~~------------~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~ 447 (455)
++++++|+|+.+. +.+++++|.++|+++|+ + ++||+||+++++++++++++||||.+++++||++
T Consensus 398 ~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~ 475 (481)
T PLN02554 398 EMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQD 475 (481)
T ss_pred HHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 6556689999884 35899999999999997 6 8999999999999999999999999999999999
Q ss_pred HHhh
Q 044936 448 IRSM 451 (455)
Q Consensus 448 ~~~~ 451 (455)
+..+
T Consensus 476 ~~~~ 479 (481)
T PLN02554 476 VTKN 479 (481)
T ss_pred HHhh
Confidence 9865
No 15
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.3e-63 Score=489.72 Aligned_cols=428 Identities=25% Similarity=0.388 Sum_probs=314.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC----CCCCCCCCCCccCHH----HHHHhHhh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP----DGLPPDNPRFGIYIK----DWFCSDKP 72 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~l~~~~~~~~~~~~----~~~~~~~~ 72 (455)
|+.||+.|+.||+.|||++++.+..++..... ...++|++..+| +++|++.. ...+.. .++....+
T Consensus 23 ~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~-----~~~~~i~~~~lp~p~~dglp~~~~-~~~~~~~~~~~~~~~~~~ 96 (472)
T PLN02670 23 FLRLSKLLAQKGHKISFISTPRNLHRLPKIPS-----QLSSSITLVSFPLPSVPGLPSSAE-SSTDVPYTKQQLLKKAFD 96 (472)
T ss_pred HHHHHHHHHhCCCEEEEEeCCchHHhhhhccc-----cCCCCeeEEECCCCccCCCCCCcc-cccccchhhHHHHHHHHH
Confidence 58999999999999999999998877654211 112358999887 67876532 122221 23444555
Q ss_pred hhHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCcccc
Q 044936 73 VSKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCI 152 (455)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 152 (455)
.+.+.+++++++. +++|||+|.++.|+..+|+++|||++.|++++++.++.+.+.......+..+...........++
T Consensus 97 ~~~~~~~~~l~~~--~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 174 (472)
T PLN02670 97 LLEPPLTTFLETS--KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWV 174 (472)
T ss_pred HhHHHHHHHHHhC--CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccccCCCCcC
Confidence 6788888888775 78999999999999999999999999999999988887654322211222221111110011122
Q ss_pred CCCCc-cccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC-CceeEeCccccccccc
Q 044936 153 PGLEN-IFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKSR 230 (455)
Q Consensus 153 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~~~~~ 230 (455)
|.... .++..+++.++............+.+......+++.+++|||.+||+.++++++... ++++.|||+.+.....
T Consensus 175 P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~ 254 (472)
T PLN02670 175 PFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDD 254 (472)
T ss_pred CCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccccc
Confidence 32211 134456666553211121222333444445567889999999999999999998764 6899999997531110
Q ss_pred ccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCC
Q 044936 231 IQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEP 310 (455)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~ 310 (455)
. ... ..+. ..+++|.+|||++++++||||||||+..++.+++.+++.+|+.++++|||+++.+......
T Consensus 255 ~------~~~----~~~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~ 323 (472)
T PLN02670 255 E------EDD----TIDV-KGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQN 323 (472)
T ss_pred c------ccc----cccc-chhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccc
Confidence 0 000 0000 1124699999999889999999999999999999999999999999999999853211001
Q ss_pred CCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceee
Q 044936 311 GVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (455)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g 389 (455)
....+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++ +|+|
T Consensus 324 ~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~G 402 (472)
T PLN02670 324 ALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLG 402 (472)
T ss_pred hhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCee
Confidence 11258999999988888876 999999999999999999999999999999999999999999999999999966 8999
Q ss_pred eecC-----CCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhc
Q 044936 390 LDMK-----DTCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSMA 452 (455)
Q Consensus 390 ~~~~-----~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 452 (455)
+.+. +.++.++|.++|+++|. ++|.+||+||+++++.+++. +...+.+++|++++...+
T Consensus 403 v~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~----~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 403 LEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM----DRNNRYVDELVHYLRENR 467 (472)
T ss_pred EEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc----chhHHHHHHHHHHHHHhc
Confidence 9985 24899999999999997 44669999999999999976 455678888888887653
No 16
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=3.3e-63 Score=487.77 Aligned_cols=414 Identities=28% Similarity=0.482 Sum_probs=307.8
Q ss_pred CHHHHHHHHhCC--CEEEE--EeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCC-CCCCccCHHHHHHhHhhhhH
Q 044936 1 MLTLAELFSHAG--FRVTF--VNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPD-NPRFGIYIKDWFCSDKPVSK 75 (455)
Q Consensus 1 ~l~LA~~L~~rG--h~Vt~--~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 75 (455)
|+.||++|+.|| +.||+ ++++.+...+.+... ......++|+|..+|++.+.. ......+....+......+.
T Consensus 20 ~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (451)
T PLN03004 20 MVELGKTILSKNPSLSIHIILVPPPYQPESTATYIS--SVSSSFPSITFHHLPAVTPYSSSSTSRHHHESLLLEILCFSN 97 (451)
T ss_pred HHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhc--cccCCCCCeEEEEcCCCCCCCCccccccCHHHHHHHHHHhhh
Confidence 689999999999 45555 555443333221100 001122469999999776422 11111223333333444567
Q ss_pred HHHHHHHhcC--CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccC
Q 044936 76 LAFRRLLMTP--GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIP 153 (455)
Q Consensus 76 ~~l~~ll~~~--~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 153 (455)
+.+++++++. +.+++|||+|.+++|+..+|+++|||++.|++++++.++.+.+++.... ..|..... ......+|
T Consensus 98 ~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~--~~~~~~~~-~~~~v~iP 174 (451)
T PLN03004 98 PSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDE--TTPGKNLK-DIPTVHIP 174 (451)
T ss_pred HHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccc--cccccccc-cCCeecCC
Confidence 7788888763 2256999999999999999999999999999999999988877553211 11110000 00123478
Q ss_pred CCCccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC--CceeEeCcccccccccc
Q 044936 154 GLENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL--TKIYTVGPLHALLKSRI 231 (455)
Q Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~--p~v~~vGpl~~~~~~~~ 231 (455)
+++. ++..++|.++... .......+.+......+++.+++|||++||..++++++... ++++.|||++......
T Consensus 175 g~p~-l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~- 250 (451)
T PLN03004 175 GVPP-MKGSDMPKAVLER--DDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIE- 250 (451)
T ss_pred CCCC-CChHHCchhhcCC--chHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCcccc-
Confidence 8877 7888888765432 22233444455555677889999999999999999998752 6899999997421100
Q ss_pred cccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC--
Q 044936 232 QEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGE-- 309 (455)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~-- 309 (455)
. . . . ..+.+|++|||++++++||||||||+..++.+++++|+.||+.++++|||+++.+.....
T Consensus 251 ------~-~-----~-~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~ 316 (451)
T PLN03004 251 ------D-R-----N-D-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTE 316 (451)
T ss_pred ------c-c-----c-c-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccc
Confidence 0 0 1 1 124569999999988999999999999999999999999999999999999985311000
Q ss_pred -CCCCCCChhhhhhcCCCee-EEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhce
Q 044936 310 -PGVGPVPVELDQGTKERGC-IVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (455)
Q Consensus 310 -~~~~~~~~~~~~~~~~~~~-~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g 387 (455)
.....+|++|++++.++.+ +.+|+||.+||+|+++|+|||||||||++||+++|||+|++|+++||+.||+++++++|
T Consensus 317 ~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g 396 (451)
T PLN03004 317 LDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIK 396 (451)
T ss_pred cchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhC
Confidence 0011378899998877655 55999999999999999999999999999999999999999999999999999987689
Q ss_pred eeeecC-C---CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHH
Q 044936 388 IGLDMK-D---TCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYR 439 (455)
Q Consensus 388 ~g~~~~-~---~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~ 439 (455)
+|+.++ + .++.++|.++|+++|++ ++||++|++++++++.++++||||++
T Consensus 397 ~g~~l~~~~~~~~~~e~l~~av~~vm~~--~~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 397 IAISMNESETGFVSSTEVEKRVQEIIGE--CPVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred ceEEecCCcCCccCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999996 2 57999999999999998 88999999999999999999999864
No 17
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=9e-62 Score=475.70 Aligned_cols=407 Identities=21% Similarity=0.356 Sum_probs=306.7
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC--CCCCCCCCCC---ccCHHHHHHhHhhhhH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP--DGLPPDNPRF---GIYIKDWFCSDKPVSK 75 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~l~~~~~~~---~~~~~~~~~~~~~~~~ 75 (455)
|++||+.|+.||+.|||++|+.+..++..... ......+.+.++| +++|++.... ..+....+......+.
T Consensus 22 ~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~----~~~~~~v~~~~~p~~~glp~g~e~~~~~~~~~~~~~~~a~~~~~ 97 (453)
T PLN02764 22 FLFLANKLAEKGHTVTFLLPKKALKQLEHLNL----FPHNIVFRSVTVPHVDGLPVGTETVSEIPVTSADLLMSAMDLTR 97 (453)
T ss_pred HHHHHHHHHhCCCEEEEEeCcchhhhhccccc----CCCCceEEEEECCCcCCCCCcccccccCChhHHHHHHHHHHHhH
Confidence 58999999999999999999988766544210 0111137777787 7887762111 1111122333334567
Q ss_pred HHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCC
Q 044936 76 LAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGL 155 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~ 155 (455)
+.++++++.. ++||||+|. +.|+.++|+++|||++.|++++++.++.+.. +. ...+ .. .|++
T Consensus 98 ~~~~~~l~~~--~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~----~~~~-------~~---~pgl 159 (453)
T PLN02764 98 DQVEVVVRAV--EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-PG----GELG-------VP---PPGY 159 (453)
T ss_pred HHHHHHHHhC--CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-cc----ccCC-------CC---CCCC
Confidence 8888888775 689999995 8899999999999999999999988776642 11 1110 00 1333
Q ss_pred Cc---cccCCCCCCccc--CCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC-CceeEeCcccccccc
Q 044936 156 EN---IFRNRDLPSICR--DGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALLKS 229 (455)
Q Consensus 156 ~~---~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~~~~ 229 (455)
+. .++.++++.+.. .............+......+++.+++|||++||+.++++++... ++++.|||+++....
T Consensus 160 p~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~ 239 (453)
T PLN02764 160 PSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDK 239 (453)
T ss_pred CCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccc
Confidence 31 133444444211 101111122222222245567889999999999999999998754 689999999753210
Q ss_pred cccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC
Q 044936 230 RIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGE 309 (455)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~ 309 (455)
. . ..+++|++|||++++++||||||||+..++.+++.+++.+|+.++++|+|+++.+....
T Consensus 240 ----------~-----~---~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~- 300 (453)
T PLN02764 240 ----------T-----R---ELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSS- 300 (453)
T ss_pred ----------c-----c---cchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCc-
Confidence 0 0 12457999999999999999999999989999999999999999999999998532110
Q ss_pred CCCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhcee
Q 044936 310 PGVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKI 388 (455)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~ 388 (455)
.....+|++|++++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+
T Consensus 301 ~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~ 380 (453)
T PLN02764 301 TIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKV 380 (453)
T ss_pred chhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhce
Confidence 012258999999988888777 9999999999999999999999999999999999999999999999999999777899
Q ss_pred eeecC-C---CCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhc
Q 044936 389 GLDMK-D---TCDRSTIENLVRDLMD---NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSMA 452 (455)
Q Consensus 389 g~~~~-~---~~~~~~l~~~i~~~l~---~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 452 (455)
|+.+. + .++.++|.++|+++|+ +++..+|++|+++++.+++ ||||..++++||+++....
T Consensus 381 gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 381 SVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred EEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHhc
Confidence 99874 2 5899999999999996 3467899999999999854 7999999999999998754
No 18
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.8e-62 Score=487.54 Aligned_cols=427 Identities=25% Similarity=0.388 Sum_probs=308.6
Q ss_pred CHHHHHHHHhCC---CEEEEEeCCcchh-hhcCCCCCCCccCCCCCeEEEeCCCCCCC-CCCCCccCHHHHHHhHhhhhH
Q 044936 1 MLTLAELFSHAG---FRVTFVNTEQYHD-RLLGNTDVTGFYKRFPNFRFTSIPDGLPP-DNPRFGIYIKDWFCSDKPVSK 75 (455)
Q Consensus 1 ~l~LA~~L~~rG---h~Vt~~t~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~ 75 (455)
|++||+.|+.|| +.||++++..+.. ....... ......++|+|+.+|++..+ +...........+..+...+.
T Consensus 20 ~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~--~~~~~~~~i~~~~lp~~~~p~~~~~~~~~~~~~~~~~~~~~~ 97 (475)
T PLN02167 20 TIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLK--SLIASEPRIRLVTLPEVQDPPPMELFVKASEAYILEFVKKMV 97 (475)
T ss_pred HHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHh--hcccCCCCeEEEECCCCCCCccccccccchHHHHHHHHHHHH
Confidence 689999999999 4577777654322 1100000 00112246999999865422 110001111123333333455
Q ss_pred HHHHHHHhcC-------CC-CCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCC--CCCCC
Q 044936 76 LAFRRLLMTP-------GR-LPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPV--TNEDF 145 (455)
Q Consensus 76 ~~l~~ll~~~-------~~-~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~ 145 (455)
+.+++++++. +. +++|||+|.+++|+.++|+++|||++.|++++++.++.+.+++.... ..+. .....
T Consensus 98 ~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~--~~~~~~~~~~~ 175 (475)
T PLN02167 98 PLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHR--KTASEFDLSSG 175 (475)
T ss_pred HHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhcc--ccccccccCCC
Confidence 5555554431 12 45999999999999999999999999999999988887765543211 1110 00000
Q ss_pred CCCccccCCCCccccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhcc---CCceeEeCc
Q 044936 146 DKPVTCIPGLENIFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSR---LTKIYTVGP 222 (455)
Q Consensus 146 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~---~p~v~~vGp 222 (455)
. ....+|+++..++..+++.++... ...+.+.+..+...+++.+++|||++||+.++++++.. .|++++|||
T Consensus 176 ~-~~~~iPgl~~~l~~~dlp~~~~~~----~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGp 250 (475)
T PLN02167 176 E-EELPIPGFVNSVPTKVLPPGLFMK----ESYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGP 250 (475)
T ss_pred C-CeeECCCCCCCCChhhCchhhhCc----chHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEecc
Confidence 0 112367773226677777544321 11233344455567789999999999999999999754 478999999
Q ss_pred ccccccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 044936 223 LHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIR 302 (455)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~ 302 (455)
+++...... . ..+ ..++++|++||+.+++++||||||||+..++.+++.+++.||+.++++|||+++
T Consensus 251 l~~~~~~~~--~---~~~--------~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~ 317 (475)
T PLN02167 251 ILSLKDRTS--P---NLD--------SSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIR 317 (475)
T ss_pred ccccccccC--C---CCC--------cchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEe
Confidence 986422100 0 011 012356999999988899999999999888999999999999999999999997
Q ss_pred CCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHh
Q 044936 303 SDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCV 382 (455)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~ 382 (455)
.+..........+|++|.+++.+++++++|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++
T Consensus 318 ~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~ 397 (475)
T PLN02167 318 TNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTM 397 (475)
T ss_pred cCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHH
Confidence 53210000112478999989989999999999999999999999999999999999999999999999999999999875
Q ss_pred hhhceeeeecC--------CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHh
Q 044936 383 SEIWKIGLDMK--------DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRS 450 (455)
Q Consensus 383 ~~~~g~g~~~~--------~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 450 (455)
.+++|+|+.+. ..+++++|.++|+++|.++ +.||+||+++++.+++++++||||++++++||+++.-
T Consensus 398 ~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~-~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 398 VKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE-DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred HHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 56689999884 2469999999999999742 5899999999999999999999999999999999864
No 19
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=2.1e-61 Score=475.72 Aligned_cols=398 Identities=21% Similarity=0.357 Sum_probs=299.4
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeC--C--CCCCCCCCCCccCHH----HHHHhHhh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSI--P--DGLPPDNPRFGIYIK----DWFCSDKP 72 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~l~~~~~~~~~~~~----~~~~~~~~ 72 (455)
|++||+.|++|||+|||+|++.+..++.+.+. ..+.+++..+ + +++|++.. ...++. .++.....
T Consensus 21 ~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a------~~~~i~~~~l~~p~~dgLp~g~~-~~~~l~~~l~~~~~~~~~ 93 (442)
T PLN02208 21 FLHLANKLAEKGHRVTFLLPKKAQKQLEHHNL------FPDSIVFHPLTIPPVNGLPAGAE-TTSDIPISMDNLLSEALD 93 (442)
T ss_pred HHHHHHHHHhCCCEEEEEeccchhhhhhcccC------CCCceEEEEeCCCCccCCCCCcc-cccchhHHHHHHHHHHHH
Confidence 58999999999999999999888777654321 1124555544 4 56776532 122222 22333344
Q ss_pred hhHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCcccc
Q 044936 73 VSKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCI 152 (455)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 152 (455)
.+.+.++++++.. ++||||+| ++.|+..+|+++|||++.|++++++.+. +.+.+. ...+ . -+
T Consensus 94 ~~~~~l~~~L~~~--~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~~-------~---~~ 155 (442)
T PLN02208 94 LTRDQVEAAVRAL--RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKLG-------V---PP 155 (442)
T ss_pred HHHHHHHHHHhhC--CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----cccC-------C---CC
Confidence 5677788888765 78999999 5789999999999999999999998654 433221 0000 0 02
Q ss_pred CCCCc---cccCCCCCCcccCCCCCchHHHHHHHH-hhhhccCceEEeccccccchHHHHHhhccC-CceeEeCcccccc
Q 044936 153 PGLEN---IFRNRDLPSICRDGGPDDPILQTFIRD-TSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHALL 227 (455)
Q Consensus 153 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~~ 227 (455)
|+++. .++..+++.+ . ........+.+. .+...+++.+++|||.+||+.++++++... |+++.|||+++..
T Consensus 156 pglp~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~ 231 (442)
T PLN02208 156 PGYPSSKVLFRENDAHAL-A---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP 231 (442)
T ss_pred CCCCCcccccCHHHcCcc-c---ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc
Confidence 44432 1345555543 1 111222333322 234567889999999999999999997654 7999999998632
Q ss_pred cccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCC
Q 044936 228 KSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLID 307 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~ 307 (455)
.. + . ..+++|.+|||++++++||||||||+..++.+++.+++.+++.++.+|+|+++.+...
T Consensus 232 ~~----------~-----~---~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~ 293 (442)
T PLN02208 232 DT----------S-----K---PLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGS 293 (442)
T ss_pred CC----------C-----C---CCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc
Confidence 10 0 0 2345799999999889999999999999999999999999999999999999854111
Q ss_pred CCCCCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhc
Q 044936 308 GEPGVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIW 386 (455)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~ 386 (455)
. .....+|++|++++.++.+++ +|+||.+||+|+++|+|||||||||++||+++|||||+||+++||+.||+++++++
T Consensus 294 ~-~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~ 372 (442)
T PLN02208 294 S-TVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEF 372 (442)
T ss_pred c-chhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHh
Confidence 0 011257889988877655555 99999999999999999999999999999999999999999999999999887778
Q ss_pred eeeeecC-CC---CCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHh
Q 044936 387 KIGLDMK-DT---CDRSTIENLVRDLMD---NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRS 450 (455)
Q Consensus 387 g~g~~~~-~~---~~~~~l~~~i~~~l~---~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 450 (455)
|+|+.+. +. +++++|.++|+++|+ ++++.+|++|+++++.+.+ ||||++++++||+++.+
T Consensus 373 g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~----~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 373 EVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS----PGLLTGYVDKFVEELQE 439 (442)
T ss_pred ceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHH
Confidence 9999996 33 899999999999996 3478899999999999742 78999999999999865
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.9e-61 Score=482.44 Aligned_cols=431 Identities=26% Similarity=0.480 Sum_probs=306.3
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCC-CccCCC-CCeEEEeCC---CCCCCCCCCC-------ccCHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVT-GFYKRF-PNFRFTSIP---DGLPPDNPRF-------GIYIKDWFC 68 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~-~~~~~~-~~i~~~~~~---~~l~~~~~~~-------~~~~~~~~~ 68 (455)
|+.||++|++|||+|||++++.+.+++.+..... ...... -.+.+.++| +++|++.... ..+...++.
T Consensus 22 ~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~ 101 (482)
T PLN03007 22 TLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFL 101 (482)
T ss_pred HHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcccccccccccccchHHHHH
Confidence 5899999999999999999999887665432110 000111 145556666 4676642111 011122222
Q ss_pred hH---hhhhHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCC
Q 044936 69 SD---KPVSKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDF 145 (455)
Q Consensus 69 ~~---~~~~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 145 (455)
.+ ...+.+.++++++.. ++||||+|.++.|+..+|+++|||++.|++++++....+..+....+....+...
T Consensus 102 ~~~~~~~~l~~~l~~~l~~~--~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~--- 176 (482)
T PLN03007 102 KFLFSTKYFKDQLEKLLETT--RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSS--- 176 (482)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCC---
Confidence 22 234556666666544 7999999999999999999999999999999998877665433211111111000
Q ss_pred CCCccccCCCCc--cccCCCCCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC-CceeEeCc
Q 044936 146 DKPVTCIPGLEN--IFRNRDLPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGP 222 (455)
Q Consensus 146 ~~~~~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGp 222 (455)
....+|+++. .+...+++.. .....+........+...+++.+++|||++||++++++++... +++++|||
T Consensus 177 --~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGP 250 (482)
T PLN03007 177 --EPFVIPDLPGDIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGP 250 (482)
T ss_pred --ceeeCCCCCCccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcc
Confidence 0112455542 1233333321 1112222333333345677889999999999999999998765 47999999
Q ss_pred ccccccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 044936 223 LHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIR 302 (455)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~ 302 (455)
+..........+ ..+ ...+..+++|.+||+++++++||||||||+...+.+++.+++.+|+.++++|||+++
T Consensus 251 l~~~~~~~~~~~---~~~-----~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~ 322 (482)
T PLN03007 251 LSLYNRGFEEKA---ERG-----KKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVR 322 (482)
T ss_pred cccccccccccc---ccC-----CccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 865322100000 001 111223467999999988899999999999988899999999999999999999998
Q ss_pred CCCCCCCCCCCCCChhhhhhcCC-CeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHH
Q 044936 303 SDLIDGEPGVGPVPVELDQGTKE-RGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRC 381 (455)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~ 381 (455)
.+.... .....+|++|.++..+ |+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++
T Consensus 323 ~~~~~~-~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~ 401 (482)
T PLN03007 323 KNENQG-EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKL 401 (482)
T ss_pred cCCccc-chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHH
Confidence 542110 0012478888877654 55566999999999999999999999999999999999999999999999999998
Q ss_pred hhhhceeeeec--------C-CCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 382 VSEIWKIGLDM--------K-DTCDRSTIENLVRDLMDN-KRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 382 ~~~~~g~g~~~--------~-~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
+++.+++|+.+ + +.++.++|+++|+++|.+ ++++||+||+++++++++++.+||||++++++||+++...
T Consensus 402 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 402 VTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred HHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 87655666554 3 458999999999999974 4569999999999999999999999999999999998753
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.7e-60 Score=469.91 Aligned_cols=399 Identities=22% Similarity=0.332 Sum_probs=299.6
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeC--C--CCCCCCCCCCccCH----HHHHHhHhh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSI--P--DGLPPDNPRFGIYI----KDWFCSDKP 72 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~l~~~~~~~~~~~----~~~~~~~~~ 72 (455)
|++||+.|++||++|||++++.+..++.+... ..++++|..+ | +++|++.. ...++ ...+.....
T Consensus 21 mL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~------~~~~i~~~~i~lP~~dGLP~g~e-~~~~l~~~~~~~~~~a~~ 93 (446)
T PLN00414 21 YLHLANKLAEKGHRVTFFLPKKAHKQLQPLNL------FPDSIVFEPLTLPPVDGLPFGAE-TASDLPNSTKKPIFDAMD 93 (446)
T ss_pred HHHHHHHHHhCCCEEEEEeCCchhhhhccccc------CCCceEEEEecCCCcCCCCCccc-ccccchhhHHHHHHHHHH
Confidence 68999999999999999999888776654321 1124788554 3 67777631 22222 112333333
Q ss_pred hhHHHHHHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCcccc
Q 044936 73 VSKLAFRRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCI 152 (455)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l 152 (455)
.+.+.++++++.. ++||||+|. ++|+.++|+++|||++.|++++++.++.+.+ +.. .... .+
T Consensus 94 ~l~~~l~~~L~~~--~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~-~~~-~~~~-------------~~ 155 (446)
T PLN00414 94 LLRDQIEAKVRAL--KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA-PRA-ELGF-------------PP 155 (446)
T ss_pred HHHHHHHHHHhcC--CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC-cHh-hcCC-------------CC
Confidence 5667777777654 789999995 8899999999999999999999988877654 110 0000 01
Q ss_pred CCCCcc---ccCCC--CCCcccCCCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHhhccC-CceeEeCccccc
Q 044936 153 PGLENI---FRNRD--LPSICRDGGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKLGSRL-TKIYTVGPLHAL 226 (455)
Q Consensus 153 ~~~~~~---~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vGpl~~~ 226 (455)
|+++.. ++..+ ++.++.. ....+.+..+...+++.+++|||.+||+.++++++..+ ++++.|||+.+.
T Consensus 156 pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~ 229 (446)
T PLN00414 156 PDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPE 229 (446)
T ss_pred CCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCC
Confidence 222210 11111 1121110 11233344455667899999999999999999998764 579999999753
Q ss_pred ccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 044936 227 LKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI 306 (455)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~ 306 (455)
... . .. ...+++|++|||.+++++||||||||....+.+++.+++.+|+.++++|+|+++.+..
T Consensus 230 ~~~----------~-----~~-~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~ 293 (446)
T PLN00414 230 PQN----------K-----SG-KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKG 293 (446)
T ss_pred ccc----------c-----cC-cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCC
Confidence 210 0 00 0123569999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCCChhhhhhcCCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhh
Q 044936 307 DGEPGVGPVPVELDQGTKERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEI 385 (455)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~ 385 (455)
.. .....+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||++++++
T Consensus 294 ~~-~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~ 372 (446)
T PLN00414 294 SS-TVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEE 372 (446)
T ss_pred cc-cchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHH
Confidence 10 012258999999999999887 9999999999999999999999999999999999999999999999999999877
Q ss_pred ceeeeecC-C---CCCHHHHHHHHHHHHh---HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 386 WKIGLDMK-D---TCDRSTIENLVRDLMD---NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 386 ~g~g~~~~-~---~~~~~~l~~~i~~~l~---~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
+|+|+.+. + .++.++|+++|+++|. ++++.+|++|+++++.+.+ +||+| .++++||+++.+.
T Consensus 373 ~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~---~gg~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 373 LEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVS---PGLLS-GYADKFVEALENE 441 (446)
T ss_pred hCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHc---CCCcH-HHHHHHHHHHHHh
Confidence 89999995 2 4899999999999996 3467899999999999744 47744 4489999999654
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.8e-50 Score=405.90 Aligned_cols=314 Identities=18% Similarity=0.236 Sum_probs=244.2
Q ss_pred HHHHHHHhcCCCCCcEEEECCCcchhHHHHHHc-CCCeEEEcccchHHHHHHHhhh-hhhhcCCCCCCCCCCCCCccccC
Q 044936 76 LAFRRLLMTPGRLPTCIISDSIMSFTIDVAEEL-NIPIITFRPYSAHCSWSDFHFS-KLAEEGELPVTNEDFDKPVTCIP 153 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~~~~~~~lA~~l-gIP~v~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~l~ 153 (455)
+.+.++|+..+.+||+||+|++..|+..+|+.+ ++|.|.+++.......... .+ .+.+++|+|.....+++.|+++.
T Consensus 124 ~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~-~gg~p~~~syvP~~~~~~~~~Msf~~ 202 (507)
T PHA03392 124 PNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFET-MGAVSRHPVYYPNLWRSKFGNLNVWE 202 (507)
T ss_pred HHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHh-hccCCCCCeeeCCcccCCCCCCCHHH
Confidence 344566652233899999999888999999999 9998888776554333222 34 77888999999888889999999
Q ss_pred CCCccccCCCCCCcccC-CCCCchHHHHHHH-----HhhhhccCceEEeccccccchHHHHHhhccCCceeEeCcccccc
Q 044936 154 GLENIFRNRDLPSICRD-GGPDDPILQTFIR-----DTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVGPLHALL 227 (455)
Q Consensus 154 ~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~vlvns~~~le~~~~~~~~~~~p~v~~vGpl~~~~ 227 (455)
|+.|.+........... ....+...+.+.. ..+...+.+++|+|+.+.+|+| ||.+|++++|||++...
T Consensus 203 R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~~ 277 (507)
T PHA03392 203 TINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLHK 277 (507)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-----CCCCCCeeeecccccCC
Confidence 98883221110000000 0111111122211 1133456789999999999887 99999999999998742
Q ss_pred cccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCccc---CCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 044936 228 KSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIK---LGREQILEFWHGMVNSGKRFLWVIRSD 304 (455)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~---~~~~~~~~~~~~l~~~~~~~iw~~~~~ 304 (455)
.+. ...++++.+|++.. ++++|||||||+.. .+.+.++.+++++++.+++|||+++..
T Consensus 278 ~~~------------------~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~ 338 (507)
T PHA03392 278 KPP------------------QPLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGE 338 (507)
T ss_pred CCC------------------CCCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 110 02456788999965 56899999999863 577889999999999999999998632
Q ss_pred CCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhh
Q 044936 305 LIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSE 384 (455)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~ 384 (455)
..+ ...++|+++.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||+++++
T Consensus 339 ---------~~~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~ 405 (507)
T PHA03392 339 ---------VEA----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE 405 (507)
T ss_pred ---------cCc----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH
Confidence 111 1257899999999999999999999999999999999999999999999999999999999977
Q ss_pred hceeeeecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 385 IWKIGLDMK-DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 385 ~~g~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
+|+|+.++ ..++.++|.++|+++|+| ++||+||+++++.+++.
T Consensus 406 -~G~G~~l~~~~~t~~~l~~ai~~vl~~--~~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 406 -LGIGRALDTVTVSAAQLVLAIVDVIEN--PKYRKNLKELRHLIRHQ 449 (507)
T ss_pred -cCcEEEeccCCcCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhC
Confidence 79999998 789999999999999999 99999999999999985
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=5.3e-53 Score=431.13 Aligned_cols=379 Identities=24% Similarity=0.345 Sum_probs=240.5
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCC-ccCHH-HHHH----------
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRF-GIYIK-DWFC---------- 68 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~-~~~~~-~~~~---------- 68 (455)
|..|+++|++|||+||++++... ..+... ...++++..++...+...... ..+.. ..+.
T Consensus 16 ~~~l~~~L~~rGH~VTvl~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (500)
T PF00201_consen 16 MRPLAEELAERGHNVTVLTPSPS-SSLNPS--------KPSNIRFETYPDPYPEEEFEEIFPEFISKFFSESSFANSFWE 86 (500)
T ss_dssp HHHHHHHHHHH-TTSEEEHHHHH-HT--------------S-CCEEEE-----TT------TTHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeecc-cccccc--------cccceeeEEEcCCcchHHHhhhhHHHHHHHhhhcccchhHHH
Confidence 35799999999999999987432 222211 122566666665443321111 11110 1111
Q ss_pred ---h---HhhhhHHHHHHHHhcC-------CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhc
Q 044936 69 ---S---DKPVSKLAFRRLLMTP-------GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEE 135 (455)
Q Consensus 69 ---~---~~~~~~~~l~~ll~~~-------~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 135 (455)
. +.......+++++.+. ..++|++|+|.+.+|+..+|+.+++|.+.+.+..+.........+.+.++
T Consensus 87 ~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~p 166 (500)
T PF00201_consen 87 MFKMLNAFFDFFSKSCEDLLSDPELMEQLKSEKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPP 166 (500)
T ss_dssp HHHHHHCHHHS----E--EEEETTSTTHHHHHHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTST
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhccccceEeeccchhHHHHHHhcCCeEEEecccccchhhhhccCCCCCh
Confidence 0 1111122222233220 11799999999989999999999999987655433222111212456678
Q ss_pred CCCCCCCCCCCCCccccCCCCccccCCC---CCC-cccC-CCCCchHHHHHHHHhhhhccCceEEeccccccchHHHHHh
Q 044936 136 GELPVTNEDFDKPVTCIPGLENIFRNRD---LPS-ICRD-GGPDDPILQTFIRDTSATTRTSALVINTFNEIEGPIISKL 210 (455)
Q Consensus 136 ~~~p~~~~~~~~~~~~l~~~~~~~~~~~---l~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~vlvns~~~le~~~~~~~ 210 (455)
+|+|....++++.|.+..|+.|.+.... +.. .... ...............+.+.+.+++++|+.+.+++|
T Consensus 167 syvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p----- 241 (500)
T PF00201_consen 167 SYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP----- 241 (500)
T ss_dssp TSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE---------
T ss_pred HHhccccccCCCccchhhhhhhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-----
Confidence 8999888888888999998888321100 000 0000 00000000000011223345678999999888877
Q ss_pred hccCCceeEeCcccccccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCccc-CCHHHHHHHHHH
Q 044936 211 GSRLTKIYTVGPLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIK-LGREQILEFWHG 289 (455)
Q Consensus 211 ~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~~ 289 (455)
+|..|++++|||++..+.+ ..+.++..|++...+++||||||||+.. ++.+..++++++
T Consensus 242 rp~~p~v~~vGgl~~~~~~--------------------~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~ 301 (500)
T PF00201_consen 242 RPLLPNVVEVGGLHIKPAK--------------------PLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEA 301 (500)
T ss_dssp HHHHCTSTTGCGC-S------------------------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHH
T ss_pred cchhhcccccCcccccccc--------------------ccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHH
Confidence 9999999999999875432 1344577899965678999999999875 444558899999
Q ss_pred HHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 290 MVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 290 l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
+++++++|||++++. .+ +.+++|+++.+|+||.+||+|+++++||||||+||++||+++|||+|++
T Consensus 302 ~~~~~~~~iW~~~~~----------~~----~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~ 367 (500)
T PF00201_consen 302 FENLPQRFIWKYEGE----------PP----ENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGI 367 (500)
T ss_dssp HHCSTTEEEEEETCS----------HG----CHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-
T ss_pred HhhCCCccccccccc----------cc----ccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCC
Confidence 999999999999531 11 1256899999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 370 PQIGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 370 P~~~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
|+++||+.||+++++ .|+|+.++ +.++.++|.++|+++|+| ++|++||+++++++++.
T Consensus 368 P~~~DQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~vl~~--~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 368 PLFGDQPRNAARVEE-KGVGVVLDKNDLTEEELRAAIREVLEN--PSYKENAKRLSSLFRDR 426 (500)
T ss_dssp GCSTTHHHHHHHHHH-TTSEEEEGGGC-SHHHHHHHHHHHHHS--HHHHHHHHHHHHTTT--
T ss_pred CCcccCCccceEEEE-EeeEEEEEecCCcHHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcC
Confidence 999999999999987 69999998 789999999999999999 89999999999999975
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=2.6e-42 Score=352.50 Aligned_cols=391 Identities=27% Similarity=0.381 Sum_probs=249.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCcc--CCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFY--KRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (455)
++.||++|+++||+||++++..+....... ...... .....+.+...+++++................+...+...+
T Consensus 22 ~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (496)
T KOG1192|consen 22 MLQLAKRLAERGHNVTVVTPSFNALKLSKS-SKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLDISESLLELNKTCEDLL 100 (496)
T ss_pred HHHHHHHHHHcCCceEEEEeechhcccCCc-ccceeeeeeecChHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999997765543321 100000 00011112121223333321100011111223333344444
Q ss_pred HHHHhc----CCCCCcEEEECCCcchhHHHHHHcC-CCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCC-CCcccc
Q 044936 79 RRLLMT----PGRLPTCIISDSIMSFTIDVAEELN-IPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFD-KPVTCI 152 (455)
Q Consensus 79 ~~ll~~----~~~~~D~II~D~~~~~~~~lA~~lg-IP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~l 152 (455)
++.+.. ..+++|++|+|.+..|...++.... |+...+.+.++..... +.+.+.+++|....... ..+.+.
T Consensus 101 ~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----g~~~~~~~~p~~~~~~~~~~~~~~ 176 (496)
T KOG1192|consen 101 RDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLAL----GLPSPLSYVPSPFSLSSGDDMSFP 176 (496)
T ss_pred hchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhc----CCcCcccccCcccCccccccCcHH
Confidence 443221 2224999999998778888887775 9999888887776543 33333446665543222 334444
Q ss_pred CCCCccccCCCCCCcccCCCCCchHHHHHHH-----------HhhhhccCceEEeccccccchHHHHHhhccCCceeEeC
Q 044936 153 PGLENIFRNRDLPSICRDGGPDDPILQTFIR-----------DTSATTRTSALVINTFNEIEGPIISKLGSRLTKIYTVG 221 (455)
Q Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~vlvns~~~le~~~~~~~~~~~p~v~~vG 221 (455)
.+..+ +....++.................. ..+...+++..++|+...++.+ .++..+++++||
T Consensus 177 ~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~----~~~~~~~v~~IG 251 (496)
T KOG1192|consen 177 ERVPN-LIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFE----PRPLLPKVIPIG 251 (496)
T ss_pred HHHHH-HHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCC----CCCCCCCceEEC
Confidence 44444 3222222221110000000000000 0122344556777776555541 155568999999
Q ss_pred cccccccccccccccCCCCCCCCCCCCcccccccccccccCCCC--cEEEEeecCcc---cCCHHHHHHHHHHHHhC-CC
Q 044936 222 PLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSG--TVLYVSFGSFI---KLGREQILEFWHGMVNS-GK 295 (455)
Q Consensus 222 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~-~~ 295 (455)
|++....+. .++.+++|++..+.. +||||||||+. .++.++..+++.+++.+ ++
T Consensus 252 ~l~~~~~~~--------------------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~ 311 (496)
T KOG1192|consen 252 PLHVKDSKQ--------------------KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGV 311 (496)
T ss_pred cEEecCccc--------------------cccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCc
Confidence 999752210 111356788876665 99999999998 78999999999999999 88
Q ss_pred cEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHH-hhcccccceeeecCchhHHHHHHhCCceeecCCcch
Q 044936 296 RFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEV-LAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGD 374 (455)
Q Consensus 296 ~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~l-l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~d 374 (455)
+|||+++.+... .+++++.++.++|+...+|+||.++ |.|+++++||||||||||+|++++|||+|++|+++|
T Consensus 312 ~FiW~~~~~~~~------~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~D 385 (496)
T KOG1192|consen 312 TFLWKYRPDDSI------YFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGD 385 (496)
T ss_pred eEEEEecCCcch------hhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCcccc
Confidence 999999754211 1334332222457888899999998 599999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 044936 375 QQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARD 429 (455)
Q Consensus 375 q~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~ 429 (455)
|+.||+++++.+++++.....++.+.+.+++.+++++ ++|+++|+++++.+++
T Consensus 386 Q~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~--~~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 386 QPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN--EEYKEAAKRLSEILRD 438 (496)
T ss_pred chhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC--hHHHHHHHHHHHHHHc
Confidence 9999999988766666665556666699999999998 9999999999999873
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=8.1e-38 Score=309.54 Aligned_cols=363 Identities=22% Similarity=0.297 Sum_probs=240.2
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCC-CCCC--ccCHHHHHHhHhhhhHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPD-NPRF--GIYIKDWFCSDKPVSKLA 77 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~-~~~~--~~~~~~~~~~~~~~~~~~ 77 (455)
++.||++|++|||+|||++++.+.+.+.+. +++|.++++.++.. .... ..+....+..+...+...
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~-----------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTEEFAERVEAA-----------GAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDEAEDV 80 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCHHHHHHHHHc-----------CCEEEecCCcCccccccccccCcchHHHHHHHHHHHHHH
Confidence 689999999999999999999998888776 78888887544331 1000 022333333333333334
Q ss_pred HHHHHhc-CCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCccccCCCC
Q 044936 78 FRRLLMT-PGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPVTCIPGLE 156 (455)
Q Consensus 78 l~~ll~~-~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~ 156 (455)
+.++++. ...+||+||+|++++++..+|+.+|||++.+++.+... ..++.. ..|.. ..+. ...+ ..
T Consensus 81 ~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~~----~~~~~-~~~~---~~~~-~~ 147 (392)
T TIGR01426 81 LPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEEM----VSPAG-EGSA---EEGA-IA 147 (392)
T ss_pred HHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----cccccc----ccccc-hhhh---hhhc-cc
Confidence 4444332 11289999999998899999999999999875432211 000100 00100 0000 0000 00
Q ss_pred ccccCCCCCCcccCCCCCchHHHHHHHHhh---------hhccCceEEeccccccchHHHHHhhcc-CCceeEeCccccc
Q 044936 157 NIFRNRDLPSICRDGGPDDPILQTFIRDTS---------ATTRTSALVINTFNEIEGPIISKLGSR-LTKIYTVGPLHAL 226 (455)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~vlvns~~~le~~~~~~~~~~-~p~v~~vGpl~~~ 226 (455)
+ +.+... ......+.+... ........+..+.+.|+++ .+. .++++++||+...
T Consensus 148 ~----~~~~~~-------~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~~Gp~~~~ 211 (392)
T TIGR01426 148 E----RGLAEY-------VARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA-----GETFDDSFTFVGPCIGD 211 (392)
T ss_pred c----chhHHH-------HHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC-----ccccCCCeEEECCCCCC
Confidence 0 000000 000000000000 0112223455554444443 333 4689999998753
Q ss_pred ccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 044936 227 LKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLI 306 (455)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~ 306 (455)
..+ ...|+....++++|||+|||+.......+..+++++.+.+.+++|..+...
T Consensus 212 ~~~-------------------------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~- 265 (392)
T TIGR01426 212 RKE-------------------------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGV- 265 (392)
T ss_pred ccc-------------------------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCC-
Confidence 210 112666566788999999998766666888899999999999998875321
Q ss_pred CCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhc
Q 044936 307 DGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIW 386 (455)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~ 386 (455)
....+ ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|++++.+ .
T Consensus 266 --------~~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~ 333 (392)
T TIGR01426 266 --------DPADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-L 333 (392)
T ss_pred --------ChhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-C
Confidence 01111 225689999999999999999887 99999999999999999999999999999999999977 7
Q ss_pred eeeeecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 044936 387 KIGLDMK-DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDI 448 (455)
Q Consensus 387 g~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 448 (455)
|+|+.+. ..++.++|.++|+++|+| ++|+++++++++.+++. +|. ....++|+.+
T Consensus 334 g~g~~l~~~~~~~~~l~~ai~~~l~~--~~~~~~~~~l~~~~~~~---~~~--~~aa~~i~~~ 389 (392)
T TIGR01426 334 GLGRHLPPEEVTAEKLREAVLAVLSD--PRYAERLRKMRAEIREA---GGA--RRAADEIEGF 389 (392)
T ss_pred CCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHc---CCH--HHHHHHHHHh
Confidence 9999987 688999999999999998 89999999999999876 543 3445555544
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=2.2e-36 Score=300.48 Aligned_cols=363 Identities=15% Similarity=0.144 Sum_probs=226.1
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCC----------CccCHHHHHHhH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPR----------FGIYIKDWFCSD 70 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~----------~~~~~~~~~~~~ 70 (455)
+++||++|++|||+|+|++++.+...+.+. +++|.++++..+..... ...........+
T Consensus 17 ~l~la~~L~~rGh~V~~~t~~~~~~~v~~~-----------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (401)
T cd03784 17 LVALAWALRAAGHEVRVATPPEFADLVEAA-----------GLEFVPVGGDPDELLASPERNAGLLLLGPGLLLGALRLL 85 (401)
T ss_pred HHHHHHHHHHCCCeEEEeeCHhHHHHHHHc-----------CCceeeCCCCHHHHHhhhhhcccccccchHHHHHHHHHH
Confidence 579999999999999999998877776654 68888887543221000 001111122223
Q ss_pred hhhhHHHHHHHHhcC-CCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchHHHHHHHhhhhhhhcCCCCCCCCCCCCCc
Q 044936 71 KPVSKLAFRRLLMTP-GRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAHCSWSDFHFSKLAEEGELPVTNEDFDKPV 149 (455)
Q Consensus 71 ~~~~~~~l~~ll~~~-~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 149 (455)
.......+.++++.. ..++|+||+|.+++++..+|+++|||++.+++++........+ |.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~----------~~--------- 146 (401)
T cd03784 86 RREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPP----------PL--------- 146 (401)
T ss_pred HHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCC----------cc---------
Confidence 333344445555432 2289999999988899999999999999988776432111000 00
Q ss_pred cccCCCCccccCCCCCCcccCCCCCchHHHHHHHHhhhh------ccCceEEeccccccchHHHHHhhccC-CceeEeC-
Q 044936 150 TCIPGLENIFRNRDLPSICRDGGPDDPILQTFIRDTSAT------TRTSALVINTFNEIEGPIISKLGSRL-TKIYTVG- 221 (455)
Q Consensus 150 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vlvns~~~le~~~~~~~~~~~-p~v~~vG- 221 (455)
.. .+......+... ..............+..... ...+..+....+.+.++ .+.+ ++..++|
T Consensus 147 ---~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~ 216 (401)
T cd03784 147 ---GR-ANLRLYALLEAE-LWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPP-----PPDWPRFDLVTGY 216 (401)
T ss_pred ---ch-HHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCC-----CCCccccCcEeCC
Confidence 00 000000000000 00000000000000000000 01112222222222221 3333 4556665
Q ss_pred cccccccccccccccCCCCCCCCCCCCcccccccccccccCCCCcEEEEeecCcccCC-HHHHHHHHHHHHhCCCcEEEE
Q 044936 222 PLHALLKSRIQEDSAESSPPESNNCVLSKEDRSCMTWLDSQPSGTVLYVSFGSFIKLG-REQILEFWHGMVNSGKRFLWV 300 (455)
Q Consensus 222 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~-~~~~~~~~~~l~~~~~~~iw~ 300 (455)
++...... +..++++..|++. .+++|||+|||+.... ......+++++...+.++||+
T Consensus 217 ~~~~~~~~-------------------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~ 275 (401)
T cd03784 217 GFRDVPYN-------------------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILS 275 (401)
T ss_pred CCCCCCCC-------------------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEE
Confidence 33321110 1234456678874 5678999999997644 456778999999999999999
Q ss_pred EeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHH
Q 044936 301 IRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSR 380 (455)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~ 380 (455)
.+..... . ...++|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++|+..||+.||+
T Consensus 276 ~g~~~~~--------~----~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~ 341 (401)
T cd03784 276 LGWGGLG--------A----EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAA 341 (401)
T ss_pred ccCcccc--------c----cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHH
Confidence 8643111 1 225689999999999999999888 9999999999999999999999999999999999
Q ss_pred HhhhhceeeeecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 044936 381 CVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIED 447 (455)
Q Consensus 381 ~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~ 447 (455)
++++ .|+|+.+. ..++.++|.++|++++++ + ++++++++.+.+++. +| .....++|++
T Consensus 342 ~~~~-~G~g~~l~~~~~~~~~l~~al~~~l~~--~-~~~~~~~~~~~~~~~---~g--~~~~~~~ie~ 400 (401)
T cd03784 342 RVAE-LGAGPALDPRELTAERLAAALRRLLDP--P-SRRRAAALLRRIREE---DG--VPSAADVIER 400 (401)
T ss_pred HHHH-CCCCCCCCcccCCHHHHHHHHHHHhCH--H-HHHHHHHHHHHHHhc---cC--HHHHHHHHhh
Confidence 9977 79999997 668999999999999995 4 556666666666543 33 4455566554
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-33 Score=272.78 Aligned_cols=166 Identities=19% Similarity=0.355 Sum_probs=146.6
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcc
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQ 342 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~ 342 (455)
.++++|||||||.... .+.++.+++++..++.+||...... .. .+ ..+++|+.+.+|+||..+|+++
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~~------~~-----~~~p~n~~v~~~~p~~~~l~~a 301 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-RD------TL-----VNVPDNVIVADYVPQLELLPRA 301 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-cc------cc-----ccCCCceEEecCCCHHHHhhhc
Confidence 4678999999999865 7889999999999999999887431 00 01 2267899999999999999999
Q ss_pred cccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHH
Q 044936 343 AIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKRDEIMESTV 421 (455)
Q Consensus 343 ~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~ 421 (455)
++ ||||||+||++|||++|||+|++|...||+.||.++++ .|+|..+. +.++.+.++++|+++|.| +.|+++++
T Consensus 302 d~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~l~~~~l~~~~l~~av~~vL~~--~~~~~~~~ 376 (406)
T COG1819 302 DA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIALPFEELTEERLRAAVNEVLAD--DSYRRAAE 376 (406)
T ss_pred CE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCceecCcccCCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 98 99999999999999999999999999999999999976 79999998 689999999999999999 99999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 422 KIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 422 ~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
++++.++.. +| .+.+++++++...+
T Consensus 377 ~~~~~~~~~---~g--~~~~a~~le~~~~~ 401 (406)
T COG1819 377 RLAEEFKEE---DG--PAKAADLLEEFARE 401 (406)
T ss_pred HHHHHhhhc---cc--HHHHHHHHHHHHhc
Confidence 999999998 65 66778888886554
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.81 E-value=8.4e-18 Score=161.83 Aligned_cols=121 Identities=14% Similarity=0.277 Sum_probs=96.2
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEecc--CHHHHhh
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWA--PQEEVLA 340 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~ll~ 340 (455)
+++.|+|+||..... .++++++..+ ..|++. +... . +...+|+.+.++. ...++|.
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~----------~----~~~~~ni~~~~~~~~~~~~~m~ 249 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA----------A----DPRPGNIHVRPFSTPDFAELMA 249 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc----------c----cccCCCEEEeecChHHHHHHHH
Confidence 456799999997632 5667777766 566554 3321 0 1135888888876 3467998
Q ss_pred cccccceeeecCchhHHHHHHhCCceeecCC--cchHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHH
Q 044936 341 HQAIGGFLTHSGWNSTLESMVAGVPMICWPQ--IGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDL 408 (455)
Q Consensus 341 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~--~~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~ 408 (455)
.+++ +|||||.||++|++++|+|+|++|. +.||..||+.+.+ .|+|+.+. ++++++.|.+.|+++
T Consensus 250 ~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 250 AADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred hCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEcccccCCHHHHHHHHhcC
Confidence 8888 9999999999999999999999999 7899999999976 79999997 799999999998753
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.79 E-value=6.6e-17 Score=156.67 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=105.7
Q ss_pred CCCcEEEEeecCcccCCHHH-HHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEecc-CH-HHHh
Q 044936 263 PSGTVLYVSFGSFIKLGREQ-ILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWA-PQ-EEVL 339 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~-~~ll 339 (455)
+++++|+|.-||......++ +.+++..+.. +.+++|..+.+ .+.+... .. .+..+.+|+ ++ .+++
T Consensus 183 ~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~---------~~~~~~~-~~-~~~~~~~f~~~~m~~~~ 250 (352)
T PRK12446 183 RKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKG---------NLDDSLQ-NK-EGYRQFEYVHGELPDIL 250 (352)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCc---------hHHHHHh-hc-CCcEEecchhhhHHHHH
Confidence 45679999999998644432 4444444432 47888888533 1111111 11 344556887 44 4699
Q ss_pred hcccccceeeecCchhHHHHHHhCCceeecCCc-----chHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHHhHhH
Q 044936 340 AHQAIGGFLTHSGWNSTLESMVAGVPMICWPQI-----GDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDNKR 413 (455)
Q Consensus 340 ~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~-----~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~~~ 413 (455)
.++++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+++ .|+|..+. ++++.+.|.+++.+++.|.
T Consensus 251 ~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~l~~~~~~~~~l~~~l~~ll~~~- 326 (352)
T PRK12446 251 AITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASVLYEEDVTVNSLIKHVEELSHNN- 326 (352)
T ss_pred HhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEEcchhcCCHHHHHHHHHHHHcCH-
Confidence 99998 99999999999999999999999984 489999999987 69999987 7899999999999998751
Q ss_pred HHHHHHHHH
Q 044936 414 DEIMESTVK 422 (455)
Q Consensus 414 ~~~~~~a~~ 422 (455)
+.|++++++
T Consensus 327 ~~~~~~~~~ 335 (352)
T PRK12446 327 EKYKTALKK 335 (352)
T ss_pred HHHHHHHHH
Confidence 356655544
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.72 E-value=1.3e-15 Score=146.55 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=86.4
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHhCCC-cEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccC--HHHHhh
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVNSGK-RFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAP--QEEVLA 340 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~ll~ 340 (455)
.++.|+|.+|+.. ...+++++.+.+. .|+ +.... .... ..++|+.+.+|.| ..++|.
T Consensus 187 ~~~~iLv~~g~~~------~~~l~~~l~~~~~~~~i--~~~~~--------~~~~----~~~~~v~~~~~~~~~~~~~l~ 246 (321)
T TIGR00661 187 GEDYILVYIGFEY------RYKILELLGKIANVKFV--CYSYE--------VAKN----SYNENVEIRRITTDNFKELIK 246 (321)
T ss_pred CCCcEEEECCcCC------HHHHHHHHHhCCCeEEE--EeCCC--------CCcc----ccCCCEEEEECChHHHHHHHH
Confidence 3456888888854 2345666766553 444 22110 1111 2457888899997 346777
Q ss_pred cccccceeeecCchhHHHHHHhCCceeecCCcc--hHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHHhH
Q 044936 341 HQAIGGFLTHSGWNSTLESMVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 341 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~--dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~ 411 (455)
.+++ +|||||++|++|++++|+|++++|..+ ||..||+.+++ .|+|+.++ .++ ++.+++.+++++
T Consensus 247 ~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~~~~---~~~~~~~~~~~~ 314 (321)
T TIGR00661 247 NAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEYKEL---RLLEAILDIRNM 314 (321)
T ss_pred hCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcChhhH---HHHHHHHhcccc
Confidence 8777 999999999999999999999999854 89999999977 79999986 333 555556556555
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=5.4e-14 Score=134.93 Aligned_cols=134 Identities=17% Similarity=0.205 Sum_probs=100.5
Q ss_pred CCcEEEEeecCcccCCHHH-HHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcC-CC-eeEEeccCHH-HHh
Q 044936 264 SGTVLYVSFGSFIKLGREQ-ILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTK-ER-GCIVSWAPQE-EVL 339 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~-~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~p~~-~ll 339 (455)
++++|+|.-||.....-++ +.++...+.+ ...+++..+.+. .+....... .+ ..+.+|.+++ +++
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~----------~~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND----------LEELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch----------HHHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 5678999999988543332 3334444443 467777765331 122222222 22 6677998885 599
Q ss_pred hcccccceeeecCchhHHHHHHhCCceeecCC-c---chHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHHhH
Q 044936 340 AHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ-I---GDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 340 ~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~-~---~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~ 411 (455)
..+++ +||++|.+|+.|.++.|+|+|.+|. . .||..||+.+++ .|.|..++ ..+|.+.+.+.|.+++.+
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~~~lt~~~l~~~i~~l~~~ 324 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQSELTPEKLAELILRLLSN 324 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEeccccCCHHHHHHHHHHHhcC
Confidence 99888 9999999999999999999999997 3 478889999987 69999998 789999999999999984
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.57 E-value=2.1e-12 Score=126.44 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=78.7
Q ss_pred CeeEEeccCH-HHHhhcccccceeeecCchhHHHHHHhCCceeecCC----cchHHHHHHHhhhhceeeeecC-CCCCHH
Q 044936 326 RGCIVSWAPQ-EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ----IGDQQVNSRCVSEIWKIGLDMK-DTCDRS 399 (455)
Q Consensus 326 ~~~~~~~~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~----~~dq~~na~~~~~~~g~g~~~~-~~~~~~ 399 (455)
++.+.+|..+ .+++..+++ +|+|+|.++++||+++|+|+|++|. .++|..|+..+.+ .|+|..+. ++++.+
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~~~ 312 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLTPE 312 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCCHH
Confidence 3677799854 689999998 9999999999999999999999996 4689999999977 69999887 677899
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHH
Q 044936 400 TIENLVRDLMDNKRDEIMESTVKI 423 (455)
Q Consensus 400 ~l~~~i~~~l~~~~~~~~~~a~~~ 423 (455)
.+.++|.++++| +.++++..+-
T Consensus 313 ~l~~~i~~ll~~--~~~~~~~~~~ 334 (357)
T PRK00726 313 KLAEKLLELLSD--PERLEAMAEA 334 (357)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHH
Confidence 999999999997 6666554443
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.51 E-value=6.7e-12 Score=122.44 Aligned_cols=90 Identities=13% Similarity=0.206 Sum_probs=75.4
Q ss_pred CCCeeEEecc-CHHHHhhcccccceeeecCchhHHHHHHhCCceeecCC----cchHHHHHHHhhhhceeeeecC-CCCC
Q 044936 324 KERGCIVSWA-PQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ----IGDQQVNSRCVSEIWKIGLDMK-DTCD 397 (455)
Q Consensus 324 ~~~~~~~~~~-p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~----~~dq~~na~~~~~~~g~g~~~~-~~~~ 397 (455)
.+|+.+.+|. +..++|..+++ +|+++|.+++.||+++|+|+|+.|. ..+|..|+..+.+ .|.|..+. +..+
T Consensus 234 ~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~ 310 (350)
T cd03785 234 GVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELT 310 (350)
T ss_pred CCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCC
Confidence 3688888998 44679999888 9999999999999999999999985 4678889998877 59998886 4568
Q ss_pred HHHHHHHHHHHHhHhHHHHHH
Q 044936 398 RSTIENLVRDLMDNKRDEIME 418 (455)
Q Consensus 398 ~~~l~~~i~~~l~~~~~~~~~ 418 (455)
.+++.++|.+++++ +..++
T Consensus 311 ~~~l~~~i~~ll~~--~~~~~ 329 (350)
T cd03785 311 PERLAAALLELLSD--PERLK 329 (350)
T ss_pred HHHHHHHHHHHhcC--HHHHH
Confidence 99999999999986 54443
No 34
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.38 E-value=2.3e-14 Score=124.23 Aligned_cols=135 Identities=13% Similarity=0.243 Sum_probs=91.8
Q ss_pred EEEEeecCcccCCHH-HHHHHHHHHHh--CCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccC-HHHHhhcc
Q 044936 267 VLYVSFGSFIKLGRE-QILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAP-QEEVLAHQ 342 (455)
Q Consensus 267 vv~vs~Gs~~~~~~~-~~~~~~~~l~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~ll~~~ 342 (455)
+|+|+.||.....-. .+..+...+.. ....++|..+..... .....+ .....|+.+.+|.+ ..+++..+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~------~~~~~~-~~~~~~v~~~~~~~~m~~~m~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYE------ELKIKV-ENFNPNVKVFGFVDNMAELMAAA 73 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECH------HHCCCH-CCTTCCCEEECSSSSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHH------HHHHHH-hccCCcEEEEechhhHHHHHHHc
Confidence 489999987632111 12223333332 246778877543111 000000 11225788899999 57799999
Q ss_pred cccceeeecCchhHHHHHHhCCceeecCCcc----hHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHHhH
Q 044936 343 AIGGFLTHSGWNSTLESMVAGVPMICWPQIG----DQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 343 ~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~----dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l~~ 411 (455)
++ +|||||.||++|++.+|+|+|++|... +|..|+..+++ .|+|..+. ...+.+.|.++|.+++.+
T Consensus 74 Dl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 74 DL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDESELNPEELAEAIEELLSD 144 (167)
T ss_dssp SE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSECCC-SCCCHHHHHHCHCCC
T ss_pred CE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCcccCCHHHHHHHHHHHHcC
Confidence 98 999999999999999999999999987 99999999977 69999887 667789999999999885
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.32 E-value=1.5e-09 Score=105.81 Aligned_cols=89 Identities=21% Similarity=0.288 Sum_probs=71.3
Q ss_pred CHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCc---chHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHHH
Q 044936 334 PQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQI---GDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDLM 409 (455)
Q Consensus 334 p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~---~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~l 409 (455)
+-.++|..+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+ .+.|..+. ++.+.+++.+++.+++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEecccCCHHHHHHHHHHHH
Confidence 45679999998 99999988999999999999998863 467788888876 58998886 5668999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHH
Q 044936 410 DNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 410 ~~~~~~~~~~a~~~~~~~~~~ 430 (455)
+| +.+++ ++++..++.
T Consensus 320 ~~--~~~~~---~~~~~~~~~ 335 (348)
T TIGR01133 320 LD--PANLE---AMAEAARKL 335 (348)
T ss_pred cC--HHHHH---HHHHHHHhc
Confidence 87 55544 344444444
No 36
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.24 E-value=1.1e-09 Score=102.98 Aligned_cols=103 Identities=19% Similarity=0.196 Sum_probs=75.6
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCCCCCCCCChhhhh--hcCCCeeEEeccCHH-HHhh
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELDQ--GTKERGCIVSWAPQE-EVLA 340 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~-~ll~ 340 (455)
+.|+|+||.... ......+++++... +.++.+++++.. ...+.+.+ +...|+.+..+.++. ++|.
T Consensus 171 ~~iLi~~GG~d~--~~~~~~~l~~l~~~~~~~~i~vv~G~~~--------~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~ 240 (279)
T TIGR03590 171 RRVLVSFGGADP--DNLTLKLLSALAESQINISITLVTGSSN--------PNLDELKKFAKEYPNIILFIDVENMAELMN 240 (279)
T ss_pred CeEEEEeCCcCC--cCHHHHHHHHHhccccCceEEEEECCCC--------cCHHHHHHHHHhCCCEEEEeCHHHHHHHHH
Confidence 468999996553 22445566777654 456777775321 11222222 123578888999985 7999
Q ss_pred cccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHH
Q 044936 341 HQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRC 381 (455)
Q Consensus 341 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~ 381 (455)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 241 ~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 241 EADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999 999999 9999999999999999999999999874
No 37
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.17 E-value=1.5e-09 Score=106.83 Aligned_cols=169 Identities=12% Similarity=0.049 Sum_probs=102.8
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCCCCCCCCCCCChhhhhhcC--CCeeEEeccCH
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVNS-----GKRFLWVIRSDLIDGEPGVGPVPVELDQGTK--ERGCIVSWAPQ 335 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~-----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~ 335 (455)
+++++|.+--||....-......+++++... +.++++........ ..+ +.+.+... .++....+ +.
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~-----~~~-~~~~~~~~~~~~v~~~~~-~~ 261 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRR-----LQF-EQIKAEYGPDLQLHLIDG-DA 261 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhH-----HHH-HHHHHHhCCCCcEEEECc-hH
Confidence 3556788878887642123344455444432 33455544221000 000 11111111 22322322 33
Q ss_pred HHHhhcccccceeeecCchhHHHHHHhCCceeec----CCc---ch------HHHHHHHhhhhceeeeecC-CCCCHHHH
Q 044936 336 EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW----PQI---GD------QQVNSRCVSEIWKIGLDMK-DTCDRSTI 401 (455)
Q Consensus 336 ~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~----P~~---~d------q~~na~~~~~~~g~g~~~~-~~~~~~~l 401 (455)
.+++..+++ +|+-+|..|+ |++++|+|+|++ |+. ++ |..|+..+.+ .++...+. +.+|++.|
T Consensus 262 ~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q~~~~~~~l 337 (385)
T TIGR00215 262 RKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQEECTPHPL 337 (385)
T ss_pred HHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcCCCCCHHHH
Confidence 568999888 9999999887 999999999999 763 22 5558888866 48887776 78999999
Q ss_pred HHHHHHHHhHhHH----HHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Q 044936 402 ENLVRDLMDNKRD----EIMESTVKIAKMARDAVKEGGSSYRNLEKL 444 (455)
Q Consensus 402 ~~~i~~~l~~~~~----~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~ 444 (455)
.+.+.+++.| + .++++.++--..+++...++|.+.+..+.+
T Consensus 338 ~~~~~~ll~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 338 AIALLLLLEN--GLKAYKEMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred HHHHHHHhcC--CcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 9999999987 5 555555555555555555456665443333
No 38
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.15 E-value=3.2e-08 Score=91.34 Aligned_cols=134 Identities=19% Similarity=0.251 Sum_probs=97.6
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHh-CCCc--EEEEEeCCCCCCCCCCCCCChhhhh----hcC--CCeeEEecc
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVN-SGKR--FLWVIRSDLIDGEPGVGPVPVELDQ----GTK--ERGCIVSWA 333 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~-~~~~--~iw~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~ 333 (455)
+++--|+||-|.-. ...+.+...+.|-.. .+.+ .+.+.++ ..|....+ .-+ +++.+..|-
T Consensus 217 pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP----------~MP~~~r~~l~~~A~~~p~i~I~~f~ 285 (400)
T COG4671 217 PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGP----------FMPEAQRQKLLASAPKRPHISIFEFR 285 (400)
T ss_pred CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCC----------CCCHHHHHHHHHhcccCCCeEEEEhh
Confidence 44456888877654 244556666665544 3333 3344443 24543322 223 678888987
Q ss_pred CH-HHHhhcccccceeeecCchhHHHHHHhCCceeecCC---cchHHHHHHHhhhhceeeeecC-CCCCHHHHHHHHHHH
Q 044936 334 PQ-EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ---IGDQQVNSRCVSEIWKIGLDMK-DTCDRSTIENLVRDL 408 (455)
Q Consensus 334 p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~---~~dq~~na~~~~~~~g~g~~~~-~~~~~~~l~~~i~~~ 408 (455)
.+ ..++..++. +|+-||.||+.|-|.+|+|.|++|. ..+|-.-|.|+++ +|.--.+. ++++++.++++|...
T Consensus 286 ~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~pe~lt~~~La~al~~~ 362 (400)
T COG4671 286 NDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLPENLTPQNLADALKAA 362 (400)
T ss_pred hhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCcccCChHHHHHHHHhc
Confidence 76 568988887 9999999999999999999999998 4688889999966 89876665 889999999999988
Q ss_pred Hh
Q 044936 409 MD 410 (455)
Q Consensus 409 l~ 410 (455)
++
T Consensus 363 l~ 364 (400)
T COG4671 363 LA 364 (400)
T ss_pred cc
Confidence 87
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.06 E-value=1.2e-07 Score=93.46 Aligned_cols=141 Identities=16% Similarity=0.094 Sum_probs=89.0
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCCCCCCCCCCCCChhhhhhc----------------
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVNS----GKRFLWVIRSDLIDGEPGVGPVPVELDQGT---------------- 323 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~---------------- 323 (455)
+.++|.+--||....-.+.+..+++++... +..|++.+.++.. .+.+.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~---------~~~~~~~l~~~g~~~~~~~~~~~~ 274 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS---------LEKLQAILEDLGWQLEGSSEDQTS 274 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC---------HHHHHHHHHhcCceecCCccccch
Confidence 346788888887543333344555555443 5678877632210 01111100
Q ss_pred ---CCCeeEEeccCH-HHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhh---ceeeeecCCCC
Q 044936 324 ---KERGCIVSWAPQ-EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEI---WKIGLDMKDTC 396 (455)
Q Consensus 324 ---~~~~~~~~~~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~---~g~g~~~~~~~ 396 (455)
.+++.+..+..+ .+++..+++ +|+-+|..| .|++..|+|+|.+|.-..|. |+....+. .|.++.+. ..
T Consensus 275 ~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~-~~ 349 (396)
T TIGR03492 275 LFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA-SK 349 (396)
T ss_pred hhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC-CC
Confidence 122445455444 569999998 999999766 99999999999999766665 88655331 15566653 34
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHH
Q 044936 397 DRSTIENLVRDLMDNKRDEIMEST 420 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~~~~~~~~~a 420 (455)
+.+.|.+++.++++| +..+++.
T Consensus 350 ~~~~l~~~l~~ll~d--~~~~~~~ 371 (396)
T TIGR03492 350 NPEQAAQVVRQLLAD--PELLERC 371 (396)
T ss_pred CHHHHHHHHHHHHcC--HHHHHHH
Confidence 569999999999987 5554443
No 40
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.02 E-value=8.2e-08 Score=94.79 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=75.3
Q ss_pred CCeeEEeccCH-HHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHH-HHHHHhhhhceeeeecCCCCCHHHHH
Q 044936 325 ERGCIVSWAPQ-EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQ-VNSRCVSEIWKIGLDMKDTCDRSTIE 402 (455)
Q Consensus 325 ~~~~~~~~~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~-~na~~~~~~~g~g~~~~~~~~~~~l~ 402 (455)
.++.+.+|.++ .+++..+++ +|+.+|.+|+.||+++|+|+|+.+....|. .|+..+.+ .|.|+.+ -+.+++.
T Consensus 265 ~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~---~~~~~la 338 (382)
T PLN02605 265 IPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFS---ESPKEIA 338 (382)
T ss_pred CCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeec---CCHHHHH
Confidence 46778899987 469999998 999999999999999999999998776775 58888866 5898865 4789999
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 403 NLVRDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 403 ~~i~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
++|.+++.+. + +..++|++..++.
T Consensus 339 ~~i~~ll~~~-~---~~~~~m~~~~~~~ 362 (382)
T PLN02605 339 RIVAEWFGDK-S---DELEAMSENALKL 362 (382)
T ss_pred HHHHHHHcCC-H---HHHHHHHHHHHHh
Confidence 9999999751 2 2233455555554
No 41
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.01 E-value=6.1e-08 Score=95.70 Aligned_cols=138 Identities=14% Similarity=0.224 Sum_probs=95.8
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCCCCCCCCCCChhhh---hhcCCCeeEEeccCHH-HH
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELD---QGTKERGCIVSWAPQE-EV 338 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~-~l 338 (455)
++++|++.-|+.... ..+..+++++... +.+++++.+.+. .+-+.+. +..++|+.+.+|+++. ++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~--------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l 270 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE--------ALKQSLEDLQETNPDALKVFGYVENIDEL 270 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH--------HHHHHHHHHHhcCCCcEEEEechhhHHHH
Confidence 446677777776532 2345566777553 456776654220 1111111 1233578888999874 79
Q ss_pred hhcccccceeeecCchhHHHHHHhCCceeec-CCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHHHHH
Q 044936 339 LAHQAIGGFLTHSGWNSTLESMVAGVPMICW-PQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDEIM 417 (455)
Q Consensus 339 l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~-P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 417 (455)
+..+++ +|+..|..++.||+++|+|+|+. |..+.+..|+..+.+ .|+++.. -+.+++.++|.++++| +..+
T Consensus 271 ~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~---~~~~~l~~~i~~ll~~--~~~~ 342 (380)
T PRK13609 271 FRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVI---RDDEEVFAKTEALLQD--DMKL 342 (380)
T ss_pred HHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEE---CCHHHHHHHHHHHHCC--HHHH
Confidence 999998 99999988999999999999985 666667889887765 5888765 3679999999999986 5544
Q ss_pred HH
Q 044936 418 ES 419 (455)
Q Consensus 418 ~~ 419 (455)
++
T Consensus 343 ~~ 344 (380)
T PRK13609 343 LQ 344 (380)
T ss_pred HH
Confidence 33
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.90 E-value=4e-06 Score=81.49 Aligned_cols=133 Identities=17% Similarity=0.212 Sum_probs=84.4
Q ss_pred cEEEEeecCccc-CCHHHHHHHHHHHHhC-CCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHH---Hhh
Q 044936 266 TVLYVSFGSFIK-LGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEE---VLA 340 (455)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---ll~ 340 (455)
+.+++..|+... ...+.+.+++..+... +..+++. +... ..+.+. ...+|+.+.+|+++.+ ++.
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~-G~~~---------~~~~~~-~~~~~v~~~g~~~~~~~~~~~~ 265 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIV-GDGP---------ARARLE-ARYPNVHFLGFLDGEELAAAYA 265 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEE-eCCc---------hHHHHh-ccCCcEEEEeccCHHHHHHHHH
Confidence 456677787653 2334444444444332 3455543 3210 111111 2457888899998765 788
Q ss_pred cccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHHHH
Q 044936 341 HQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDEI 416 (455)
Q Consensus 341 ~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~~~ 416 (455)
.+++ +|.++. .++++||+++|+|+|+.+..+ +...+.+ .+.|..+ ..-+.+++.++|.+++.+ +..
T Consensus 266 ~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~-~~~~~~~l~~~i~~l~~~--~~~ 335 (364)
T cd03814 266 SADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLV-EPGDAEAFAAALAALLAD--PEL 335 (364)
T ss_pred hCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEc-CCCCHHHHHHHHHHHHcC--HHH
Confidence 8888 887654 478999999999999987543 3444544 4788777 444778899999999986 444
Q ss_pred HHH
Q 044936 417 MES 419 (455)
Q Consensus 417 ~~~ 419 (455)
+++
T Consensus 336 ~~~ 338 (364)
T cd03814 336 RRR 338 (364)
T ss_pred HHH
Confidence 433
No 43
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.89 E-value=1.1e-07 Score=93.81 Aligned_cols=109 Identities=10% Similarity=0.119 Sum_probs=66.6
Q ss_pred HHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHH--------HH-----HHHhhhhceeeeecC-CCCCHHHH
Q 044936 336 EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQ--------VN-----SRCVSEIWKIGLDMK-DTCDRSTI 401 (455)
Q Consensus 336 ~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~--------~n-----a~~~~~~~g~g~~~~-~~~~~~~l 401 (455)
..++..+++ +|+.+|.+++ |++++|+|+|..|...-.+ .| +..+.+ .+++..+. ...+++++
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l 331 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELLQEEATPEKL 331 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhcCCCCCHHHH
Confidence 568999998 9999998777 9999999999985432222 11 122222 12333333 56789999
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhc
Q 044936 402 ENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSMA 452 (455)
Q Consensus 402 ~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 452 (455)
.+.+.++++| +..+++..+-.+.++... ..|++ ..+.++|.++...+
T Consensus 332 ~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~-~~~~~~i~~~~~~~ 378 (380)
T PRK00025 332 ARALLPLLAD--GARRQALLEGFTELHQQL-RCGAD-ERAAQAVLELLKQR 378 (380)
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHH-HHHHHHHHHHhhhc
Confidence 9999999997 555544333333333332 23333 44455555555444
No 44
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.83 E-value=8.3e-06 Score=80.99 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=56.6
Q ss_pred CCeeEEeccCHHH---Hhhcccccceee--e-cCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 325 ERGCIVSWAPQEE---VLAHQAIGGFLT--H-SGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 325 ~~~~~~~~~p~~~---ll~~~~~~~~i~--h-gG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
+++.+.+++|+.+ +|..+++ +|. . .|. .++.|||++|+|+|+... ......+.+ -..|..++ .-+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~-~~~G~lv~-~~d 352 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITD-GENGLLVD-FFD 352 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhccc-CCceEEcC-CCC
Confidence 5788889999865 6778887 553 2 222 479999999999998643 234444533 24677663 347
Q ss_pred HHHHHHHHHHHHhH
Q 044936 398 RSTIENLVRDLMDN 411 (455)
Q Consensus 398 ~~~l~~~i~~~l~~ 411 (455)
.+++.++|.+++++
T Consensus 353 ~~~la~~i~~ll~~ 366 (396)
T cd03818 353 PDALAAAVIELLDD 366 (396)
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999999986
No 45
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.82 E-value=1.8e-05 Score=78.28 Aligned_cols=80 Identities=19% Similarity=0.270 Sum_probs=59.6
Q ss_pred CCCeeEEeccCHHH---HhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCC
Q 044936 324 KERGCIVSWAPQEE---VLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTC 396 (455)
Q Consensus 324 ~~~~~~~~~~p~~~---ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~ 396 (455)
.+|+.+.+|+|+.+ ++..+++ ++...- ..+++||+++|+|+|+-...+ ....+.+ .+.|..++ .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~-~~~g~~~~-~~ 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVD-GVTGLLVD-PR 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccC-CCCeEEeC-CC
Confidence 46788889999865 5888888 775422 358999999999999876533 3444544 36788774 34
Q ss_pred CHHHHHHHHHHHHhH
Q 044936 397 DRSTIENLVRDLMDN 411 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~ 411 (455)
+.+++.++|.+++.+
T Consensus 354 ~~~~l~~~i~~l~~~ 368 (398)
T cd03800 354 DPEALAAALRRLLTD 368 (398)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999985
No 46
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.78 E-value=2.8e-05 Score=75.27 Aligned_cols=132 Identities=18% Similarity=0.193 Sum_probs=78.7
Q ss_pred CCcEEEEeecCcccC-CHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHH---Hh
Q 044936 264 SGTVLYVSFGSFIKL-GREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEE---VL 339 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~-~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---ll 339 (455)
.+..+++..|+.... ..+.+.+.+..+...+.++++.-.... ...........+++.+.+++++.+ ++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~--------~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLE--------LEEESYELEGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchh--------hhHHHHhhcCCCeEEEeCCCCHHHHHHHH
Confidence 344567778886532 223333333333333566655432110 000000011347788889997654 68
Q ss_pred hcccccceeee----cCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 340 AHQAIGGFLTH----SGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 340 ~~~~~~~~i~h----gG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
..+++ +|.. .|+ .++.|||++|+|+|+.+.. .....+.+ -+.|..+. .-+.+++.+++.+++++
T Consensus 261 ~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~-~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 261 AEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRD-GVNGLLFP-PGDAEDLAAALERLIDD 329 (359)
T ss_pred HhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcC-CCcEEEEC-CCCHHHHHHHHHHHHhC
Confidence 88888 6632 333 4799999999999997653 23444544 35677774 33689999999999985
No 47
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.76 E-value=2.6e-05 Score=79.23 Aligned_cols=127 Identities=20% Similarity=0.201 Sum_probs=78.5
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCCCCCCCCCCChhhhhhc-CCCeeEEeccCHHH---Hhh
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELDQGT-KERGCIVSWAPQEE---VLA 340 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~---ll~ 340 (455)
..+++..|+... ...+..+++++... +.+++++ +.. ...+.+.+.. ..++...+++++.+ ++.
T Consensus 263 ~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~G---------~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~ 330 (465)
T PLN02871 263 KPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GDG---------PYREELEKMFAGTPTVFTGMLQGDELSQAYA 330 (465)
T ss_pred CeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eCC---------hHHHHHHHHhccCCeEEeccCCHHHHHHHHH
Confidence 345566677652 23355677777765 4555544 321 1112222111 24677889998654 788
Q ss_pred cccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhh--hceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 341 HQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSE--IWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 341 ~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~--~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
.+++ ||.-.. .++++|||++|+|+|+....+ ....+.+ .-+.|..++ .-+.+++.++|.++++|
T Consensus 331 ~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~-~~d~~~la~~i~~ll~~ 400 (465)
T PLN02871 331 SGDV--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYT-PGDVDDCVEKLETLLAD 400 (465)
T ss_pred HCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeC-CCCHHHHHHHHHHHHhC
Confidence 8888 885543 346899999999999876432 1222222 136787774 33789999999999985
No 48
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.72 E-value=3e-07 Score=91.03 Aligned_cols=132 Identities=17% Similarity=0.233 Sum_probs=92.8
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCCCCCCCCChhhhhh--cCCCeeEEeccCHH-HH
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELDQG--TKERGCIVSWAPQE-EV 338 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~-~l 338 (455)
++++|++..|+... ...+..+++++.+ .+.+++++.+.+. .+-+.+.+. ..+++.+.+|.++. ++
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~--------~l~~~l~~~~~~~~~v~~~G~~~~~~~~ 270 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK--------ELKRSLTAKFKSNENVLILGYTKHMNEW 270 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH--------HHHHHHHHHhccCCCeEEEeccchHHHH
Confidence 45678888888762 1234455555432 2456666654220 111122211 23577788999774 69
Q ss_pred hhcccccceeeecCchhHHHHHHhCCceeec-CCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 339 LAHQAIGGFLTHSGWNSTLESMVAGVPMICW-PQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 339 l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~-P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
+..+++ +|+..|..|+.||++.|+|+|+. |.-+.|..|+..+.+ .|+|+.. + +.+++.++|.++++|
T Consensus 271 ~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~-~--~~~~l~~~i~~ll~~ 338 (391)
T PRK13608 271 MASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIA-D--TPEEAIKIVASLTNG 338 (391)
T ss_pred HHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEe-C--CHHHHHHHHHHHhcC
Confidence 999999 99998888999999999999998 665666789998877 6999876 2 788999999999986
No 49
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.70 E-value=3.5e-05 Score=76.76 Aligned_cols=80 Identities=18% Similarity=0.224 Sum_probs=57.5
Q ss_pred CCCeeEEeccCHH---HHhhcccccceeee---cC-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCC
Q 044936 324 KERGCIVSWAPQE---EVLAHQAIGGFLTH---SG-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTC 396 (455)
Q Consensus 324 ~~~~~~~~~~p~~---~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~ 396 (455)
.+++.+.+++|+. .+|..+++ ||.. -| ..+++||+++|+|+|+....+ ....+.+ -+.|..++ .-
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~-~~~g~~~~-~~ 353 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVAD-GETGLLVD-GH 353 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhcc-CCceEECC-CC
Confidence 4678888999875 47888887 6642 23 358999999999999965432 2233434 35677663 34
Q ss_pred CHHHHHHHHHHHHhH
Q 044936 397 DRSTIENLVRDLMDN 411 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~ 411 (455)
+.++++++|.+++++
T Consensus 354 d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 354 DPADWADALARLLDD 368 (405)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999985
No 50
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.66 E-value=3.3e-05 Score=77.77 Aligned_cols=97 Identities=12% Similarity=0.169 Sum_probs=62.4
Q ss_pred cCCCeeEEeccCHHH---Hhhcc--cccceeeec---C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC
Q 044936 323 TKERGCIVSWAPQEE---VLAHQ--AIGGFLTHS---G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~--~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~ 393 (455)
+.+++...+++++.+ ++..+ +..+||... | -.+++|||++|+|+|+....+ ....+.+ -..|..+.
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~-~~~G~lv~ 389 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIAN-CRNGLLVD 389 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcC-CCcEEEeC
Confidence 346677778888765 46554 123387654 3 358999999999999875432 3334433 24677763
Q ss_pred CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 394 DTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 394 ~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
.-+.++++++|.++++| +..+ +++++..++.
T Consensus 390 -~~d~~~la~~i~~ll~~--~~~~---~~~~~~a~~~ 420 (439)
T TIGR02472 390 -VLDLEAIASALEDALSD--SSQW---QLWSRNGIEG 420 (439)
T ss_pred -CCCHHHHHHHHHHHHhC--HHHH---HHHHHHHHHH
Confidence 34789999999999986 4432 3344444443
No 51
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.65 E-value=4.1e-05 Score=74.80 Aligned_cols=130 Identities=22% Similarity=0.263 Sum_probs=78.7
Q ss_pred CCcEEEEeecCccc-CCHHHHHHHHHHHHhC-CCcEEEEEeCCCCCCCCCCCCCChhhh----hhcCCCeeEEeccCHHH
Q 044936 264 SGTVLYVSFGSFIK-LGREQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELD----QGTKERGCIVSWAPQEE 337 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~ 337 (455)
+++.+++..|+... ...+.+.+.+..+... +..+++ ++.. ...+.+. ....+|+.+.+++++.+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~---------~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 287 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDG---------PEKEELKELAKALGLDNVTFLGRVPKEE 287 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCc---------ccHHHHHHHHHHcCCCcEEEeCCCChHH
Confidence 34567777888653 2334444444444433 445444 3321 1111111 12336788889998754
Q ss_pred ---HhhcccccceeeecCc---------hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHH
Q 044936 338 ---VLAHQAIGGFLTHSGW---------NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLV 405 (455)
Q Consensus 338 ---ll~~~~~~~~i~hgG~---------~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i 405 (455)
++..+++ +|..... +++.||+++|+|+|+.+..+.+.. +.+ .+.|..++ .-+.+++.++|
T Consensus 288 ~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~-~~~g~~~~-~~~~~~l~~~i 359 (394)
T cd03794 288 LPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEE-AGAGLVVP-PGDPEALAAAI 359 (394)
T ss_pred HHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hcc-CCcceEeC-CCCHHHHHHHH
Confidence 7788888 6644332 347999999999999887654433 223 25666663 33789999999
Q ss_pred HHHHhH
Q 044936 406 RDLMDN 411 (455)
Q Consensus 406 ~~~l~~ 411 (455)
.+++.|
T Consensus 360 ~~~~~~ 365 (394)
T cd03794 360 LELLDD 365 (394)
T ss_pred HHHHhC
Confidence 999975
No 52
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.63 E-value=0.00018 Score=71.85 Aligned_cols=81 Identities=12% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCeeEEeccCHHH---HhhcccccceeeecCc------hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 325 ERGCIVSWAPQEE---VLAHQAIGGFLTHSGW------NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 325 ~~~~~~~~~p~~~---ll~~~~~~~~i~hgG~------~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
+|+.+.+|+|+.+ ++..+++..+.+..+. +.+.|+|.+|+|+|+....+.. ....+ + +.|..++ .
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~-~ 357 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVE-P 357 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeC-C
Confidence 4788889998754 7888888444444332 2368999999999997643311 11122 2 5677663 3
Q ss_pred CCHHHHHHHHHHHHhH
Q 044936 396 CDRSTIENLVRDLMDN 411 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~ 411 (455)
-+.++++++|.++++|
T Consensus 358 ~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 358 ESVEALVAAIAALARQ 373 (412)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 4789999999999875
No 53
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.60 E-value=0.00013 Score=71.00 Aligned_cols=128 Identities=17% Similarity=0.258 Sum_probs=77.2
Q ss_pred CcEEEEeecCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCCCCCCCCChhhhh-----hcCCCeeEEeccCHH
Q 044936 265 GTVLYVSFGSFIK-LGREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELDQ-----GTKERGCIVSWAPQE 336 (455)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~ 336 (455)
++.+++..|+... ...+.+..++..+.. .+..+++.-+.+ ..+.+.+ ...+|+...+++|+.
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~----------~~~~~~~~~~~~~~~~~v~~~g~~~~~ 270 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP----------EREELEELARELGLADRVIFTGFVPRE 270 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc----------hHHHHHHHHHHcCCCCcEEEeccCChH
Confidence 3456677787653 233444444444443 234555443211 1111111 234688888999976
Q ss_pred H---Hhhcccccceeeec----CchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHH
Q 044936 337 E---VLAHQAIGGFLTHS----GWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLM 409 (455)
Q Consensus 337 ~---ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l 409 (455)
+ ++..+++ +|..+ ..+++.||+++|+|+|+.... ..+..+.+ .+.|..+.. -+. ++.+++.+++
T Consensus 271 ~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~-~~~g~~~~~-~~~-~~~~~i~~l~ 341 (374)
T cd03817 271 ELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVAD-GENGFLFPP-GDE-ALAEALLRLL 341 (374)
T ss_pred HHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhheec-CceeEEeCC-CCH-HHHHHHHHHH
Confidence 4 6888888 66443 346899999999999996542 23444544 367777742 122 8999999999
Q ss_pred hH
Q 044936 410 DN 411 (455)
Q Consensus 410 ~~ 411 (455)
++
T Consensus 342 ~~ 343 (374)
T cd03817 342 QD 343 (374)
T ss_pred hC
Confidence 85
No 54
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=98.54 E-value=2.1e-08 Score=83.86 Aligned_cols=107 Identities=19% Similarity=0.215 Sum_probs=66.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhH------hhhh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSD------KPVS 74 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~ 74 (455)
+++||++|.+|||+|++++++.+.+.+.+. |++|.+++.. .... ........+... ....
T Consensus 15 ~lala~~L~~rGh~V~~~~~~~~~~~v~~~-----------Gl~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 80 (139)
T PF03033_consen 15 FLALARALRRRGHEVRLATPPDFRERVEAA-----------GLEFVPIPGD-SRLP--RSLEPLANLRRLARLIRGLEEA 80 (139)
T ss_dssp HHHHHHHHHHTT-EEEEEETGGGHHHHHHT-----------T-EEEESSSC-GGGG--HHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEeecccceeccccc-----------CceEEEecCC-cCcC--cccchhhhhhhHHHHhhhhhHH
Confidence 478999999999999999999988888665 8999998744 0000 000011111111 1112
Q ss_pred HHHHHHHHhc----CC-C-CCcEEEECCCcchhHHHHHHcCCCeEEEcccchH
Q 044936 75 KLAFRRLLMT----PG-R-LPTCIISDSIMSFTIDVAEELNIPIITFRPYSAH 121 (455)
Q Consensus 75 ~~~l~~ll~~----~~-~-~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~ 121 (455)
...+.+...+ .+ . ..|+++.+.....+..+||++|||++.....+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 81 MRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp HHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred HHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 2233332222 12 1 5778888887888999999999999998777654
No 55
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.52 E-value=0.00029 Score=68.20 Aligned_cols=81 Identities=19% Similarity=0.260 Sum_probs=59.0
Q ss_pred cCCCeeEEeccCHH---HHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 323 TKERGCIVSWAPQE---EVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 323 ~~~~~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
..+|+.+.+++++. .++..+++ +|.. +.-+++.||+++|+|+|+-+..+ ....+.+ .+.|..+ ..
T Consensus 257 ~~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~-~~~g~~~-~~ 328 (377)
T cd03798 257 LEDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITD-GENGLLV-PP 328 (377)
T ss_pred CcceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcC-CcceeEE-CC
Confidence 34688888999975 46778787 5522 44678999999999999866533 3334444 3556666 44
Q ss_pred CCHHHHHHHHHHHHhH
Q 044936 396 CDRSTIENLVRDLMDN 411 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~ 411 (455)
-+.+++.++|.+++++
T Consensus 329 ~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 329 GDPEALAEAILRLLAD 344 (377)
T ss_pred CCHHHHHHHHHHHhcC
Confidence 5889999999999986
No 56
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.48 E-value=0.00014 Score=72.97 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=57.6
Q ss_pred CeeEEeccCH-HHHhhcccccceeee-----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHH
Q 044936 326 RGCIVSWAPQ-EEVLAHQAIGGFLTH-----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (455)
Q Consensus 326 ~~~~~~~~p~-~~ll~~~~~~~~i~h-----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~ 399 (455)
++.+.+...+ ..++..+++ ++.. +|..+++||+++|+|+|+-|..+++......+.+ .|.++.. -+.+
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~---~d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQV---EDAE 376 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEE---CCHH
Confidence 3444454444 458888887 4331 3445699999999999999988888877776644 4666654 2679
Q ss_pred HHHHHHHHHHhH
Q 044936 400 TIENLVRDLMDN 411 (455)
Q Consensus 400 ~l~~~i~~~l~~ 411 (455)
++.++|.++++|
T Consensus 377 ~La~~l~~ll~~ 388 (425)
T PRK05749 377 DLAKAVTYLLTD 388 (425)
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 57
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.48 E-value=9.5e-05 Score=71.83 Aligned_cols=129 Identities=16% Similarity=0.179 Sum_probs=80.8
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCCCCCCCCChhhh-----hhcCCCeeEEeccCHH---
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELD-----QGTKERGCIVSWAPQE--- 336 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~--- 336 (455)
..+++..|+... ...+..+++++.... ..+++...++ ..+.+. ....+|+.+.+|+|+.
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~----------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~ 258 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGP----------LEAELEALAAALGLLDRVRFLGRLDDEEKA 258 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCCh----------hHHHHHHHHHhcCCcceEEEcCCCCHHHHH
Confidence 346677787652 233555677776665 4544433211 111111 1235788899999985
Q ss_pred HHhhcccccceeee---cCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 337 EVLAHQAIGGFLTH---SGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 337 ~ll~~~~~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
.++..+++..+.++ -|+ .++.||+++|+|+|+....+....... + -+.|..++ .-+.+++.++|.+++++
T Consensus 259 ~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~-~~~g~~~~-~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 259 ALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---H-GVTGLVVP-PGDPAALAEAIRRLLED 332 (357)
T ss_pred HHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---C-CCceEEeC-CCCHHHHHHHHHHHHHC
Confidence 47778888333332 333 479999999999999766555433322 2 25666663 34789999999999986
No 58
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.48 E-value=0.0002 Score=71.57 Aligned_cols=77 Identities=21% Similarity=0.324 Sum_probs=54.1
Q ss_pred CCeeEE-eccCHHH---Hhhcccccceee----ecC---chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC
Q 044936 325 ERGCIV-SWAPQEE---VLAHQAIGGFLT----HSG---WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (455)
Q Consensus 325 ~~~~~~-~~~p~~~---ll~~~~~~~~i~----hgG---~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~ 393 (455)
+|+... +|+|..+ +|..+++ ++. .-| -+.++|||++|+|+|+... ......+.+ -+.|..+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv~~-~~~G~lv- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELVKH-GENGLVF- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHhcC-CCCEEEE-
Confidence 355544 6888654 6888888 663 112 3479999999999999543 233345544 3678877
Q ss_pred CCCCHHHHHHHHHHHHhH
Q 044936 394 DTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 394 ~~~~~~~l~~~i~~~l~~ 411 (455)
+ +.++++++|.++++|
T Consensus 366 ~--d~~~la~~i~~ll~~ 381 (415)
T cd03816 366 G--DSEELAEQLIDLLSN 381 (415)
T ss_pred C--CHHHHHHHHHHHHhc
Confidence 3 789999999999886
No 59
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.47 E-value=9.4e-05 Score=73.20 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=56.9
Q ss_pred cCCCeeEEeccCHH---HHhhcccccceeeec---C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 323 TKERGCIVSWAPQE---EVLAHQAIGGFLTHS---G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 323 ~~~~~~~~~~~p~~---~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
+.+++.+.+++|+. .++..+++ ++... | ..++.||+++|+|+|+.-..+ ....+.+ -+.|..+ ..
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~-~~~g~~~-~~ 349 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVD-GETGFLC-EP 349 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhcc-CCceEEe-CC
Confidence 34688899999986 46788887 66422 2 257899999999999964432 2233434 3567666 33
Q ss_pred CCHHHHHHHHHHHHhH
Q 044936 396 CDRSTIENLVRDLMDN 411 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~ 411 (455)
+.+++.++|.+++++
T Consensus 350 -~~~~~a~~i~~l~~~ 364 (392)
T cd03805 350 -TPEEFAEAMLKLAND 364 (392)
T ss_pred -CHHHHHHHHHHHHhC
Confidence 789999999999986
No 60
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.46 E-value=0.0005 Score=67.31 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=57.0
Q ss_pred CCCeeEEeccCH-HHHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 324 ~~~~~~~~~~p~-~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
.+++...++.++ ..++..+++ +|.- +...++.||+.+|+|+|+.... .....+.+ -..|..++ .-+.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~-~~~G~~~~-~~~~ 323 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKH-GETGFLVD-VGDV 323 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcC-CCceEEcC-CCCH
Confidence 456777888776 468888888 6633 2345999999999999996543 23444544 25676663 3478
Q ss_pred HHHHHHHHHHHhH
Q 044936 399 STIENLVRDLMDN 411 (455)
Q Consensus 399 ~~l~~~i~~~l~~ 411 (455)
+++.++|.+++++
T Consensus 324 ~~l~~~i~~l~~~ 336 (371)
T cd04962 324 EAMAEYALSLLED 336 (371)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999875
No 61
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.44 E-value=0.00059 Score=65.80 Aligned_cols=81 Identities=21% Similarity=0.303 Sum_probs=59.5
Q ss_pred cCCCeeEEeccCHH---HHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 323 TKERGCIVSWAPQE---EVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 323 ~~~~~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
..+++.+.+++++. .++..+++ +|.- |.-+++.||+++|+|+|+.+. ......+.+ -+.|..+ ..
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~-~~ 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLV-PP 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEe-CC
Confidence 45788888999754 47888887 6632 446789999999999999765 234444533 3667766 33
Q ss_pred CCHHHHHHHHHHHHhH
Q 044936 396 CDRSTIENLVRDLMDN 411 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~ 411 (455)
.+.+++.++|.+++.+
T Consensus 326 ~~~~~l~~~i~~~~~~ 341 (374)
T cd03801 326 GDPEALAEAILRLLDD 341 (374)
T ss_pred CCHHHHHHHHHHHHcC
Confidence 4689999999999886
No 62
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.43 E-value=0.00071 Score=65.12 Aligned_cols=133 Identities=20% Similarity=0.257 Sum_probs=78.9
Q ss_pred CCcEEEEeecCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCCCCCCCCChh--h-hhhcCCCeeEEeccCH-H
Q 044936 264 SGTVLYVSFGSFIK-LGREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVE--L-DQGTKERGCIVSWAPQ-E 336 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~--~~~~~iw~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~p~-~ 336 (455)
+++.+++..|+... ...+.+.+.+..+.+ .+..+++.-+... . ..... . ......++...++..+ .
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~-~------~~~~~~~~~~~~~~~~v~~~g~~~~~~ 258 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDE-E------NPAAILEIEKLGLEGRVEFLGFRDDVP 258 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCc-c------hhhHHHHHHhcCCcceEEEeeccccHH
Confidence 34567888888753 233444444444443 2345554432211 0 00000 0 0112356777777554 4
Q ss_pred HHhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 337 EVLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
.++..+++ +|.... -+++.||+.+|+|+|+-+..+ ....+.+ .+.|..++ .-+.+++.++|.+++.+
T Consensus 259 ~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~~-~~~~~~~~~~i~~l~~~ 329 (359)
T cd03808 259 ELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLVP-PGDAEALADAIERLIED 329 (359)
T ss_pred HHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEEC-CCCHHHHHHHHHHHHhC
Confidence 68888888 775543 578999999999999965432 2334433 36677663 34789999999998875
No 63
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.41 E-value=0.00038 Score=67.55 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=55.8
Q ss_pred cCCCeeEEeccCHHH---HhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
..+++.+.+|+++.+ ++..+++ +|...- .+++.|||++|+|+|+.+..+ ....+.+ +.|.....
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~--~~~~~~~~- 330 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY--GCGWVVDD- 330 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc--CceEEeCC-
Confidence 346788889999654 6788887 654332 468999999999999965432 2333322 56666532
Q ss_pred CCHHHHHHHHHHHHhH
Q 044936 396 CDRSTIENLVRDLMDN 411 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~ 411 (455)
+.+++.++|.+++++
T Consensus 331 -~~~~~~~~i~~l~~~ 345 (375)
T cd03821 331 -DVDALAAALRRALEL 345 (375)
T ss_pred -ChHHHHHHHHHHHhC
Confidence 449999999999986
No 64
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.40 E-value=0.00065 Score=66.01 Aligned_cols=133 Identities=18% Similarity=0.216 Sum_probs=76.6
Q ss_pred CCcEEEEeecCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCCCCCCCCChhhh---h--hcCCCeeEEeccCH
Q 044936 264 SGTVLYVSFGSFIK-LGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELD---Q--GTKERGCIVSWAPQ 335 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~p~ 335 (455)
++..+++..|.... ...+.+.+.+..+... +.+++++-..+... .+...+. . ...+++.+.+|.+.
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~------~~~~~~~~~~~~~~~~~~v~~~g~~~~ 256 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRR------FYYAELLELIKRLGLQDRVTFVGHCSD 256 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccc------hHHHHHHHHHHHcCCcceEEEcCCccc
Confidence 34456677787653 2344455555555553 34544443211100 1111110 1 23467888888554
Q ss_pred -HHHhhcccccceeeec----C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHH
Q 044936 336 -EEVLAHQAIGGFLTHS----G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLM 409 (455)
Q Consensus 336 -~~ll~~~~~~~~i~hg----G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l 409 (455)
..++..+++ +|.-. | .++++||+++|+|+|+....+ ....+.+ -+.|..++ .-+.+++.++|..++
T Consensus 257 ~~~~l~~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~-~~~g~~~~-~~~~~~l~~~i~~~~ 328 (355)
T cd03819 257 MPAAYALADI--VVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRP-GETGLLVP-PGDAEALAQALDQIL 328 (355)
T ss_pred HHHHHHhCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhC-CCceEEeC-CCCHHHHHHHHHHHH
Confidence 458888888 55422 2 359999999999999865432 2334434 24677764 348899999997666
Q ss_pred h
Q 044936 410 D 410 (455)
Q Consensus 410 ~ 410 (455)
.
T Consensus 329 ~ 329 (355)
T cd03819 329 S 329 (355)
T ss_pred h
Confidence 4
No 65
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.38 E-value=0.001 Score=71.86 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=55.5
Q ss_pred CCCeeEEeccCHHH---Hhhccc--ccceeeec---C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCC
Q 044936 324 KERGCIVSWAPQEE---VLAHQA--IGGFLTHS---G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (455)
Q Consensus 324 ~~~~~~~~~~p~~~---ll~~~~--~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~ 394 (455)
.+++.+.+++++.+ ++..++ .+.||.-. | ..+++||+++|+|+|+-...+ ....+.. -..|+.++
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nGlLVd- 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNGLLVD- 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcEEEEC-
Confidence 46677778888765 565552 12377652 3 358999999999999976433 1122322 24677773
Q ss_pred CCCHHHHHHHHHHHHhH
Q 044936 395 TCDRSTIENLVRDLMDN 411 (455)
Q Consensus 395 ~~~~~~l~~~i~~~l~~ 411 (455)
.-+.++|+++|.+++.|
T Consensus 621 P~D~eaLA~AL~~LL~D 637 (1050)
T TIGR02468 621 PHDQQAIADALLKLVAD 637 (1050)
T ss_pred CCCHHHHHHHHHHHhhC
Confidence 34789999999999986
No 66
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.37 E-value=0.00035 Score=68.33 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=59.9
Q ss_pred cCCCeeEEeccCHHH---Hhhcccccceeeec----------CchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceee
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHS----------GWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~hg----------G~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g 389 (455)
..+++.+.+++|+.+ ++..+++ +|... -.+++.||+++|+|+|+-+..+ +...+.+ -+.|
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~-~~~g 315 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVED-GETG 315 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheec-CCee
Confidence 356788889998754 6888887 66432 2568999999999999876543 4455544 3678
Q ss_pred eecCCCCCHHHHHHHHHHHHhH
Q 044936 390 LDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 390 ~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
..++ .-+.+++.++|.+++++
T Consensus 316 ~~~~-~~d~~~l~~~i~~l~~~ 336 (367)
T cd05844 316 LLVP-EGDVAALAAALGRLLAD 336 (367)
T ss_pred EEEC-CCCHHHHHHHHHHHHcC
Confidence 7774 34789999999999986
No 67
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.35 E-value=0.00047 Score=66.05 Aligned_cols=88 Identities=23% Similarity=0.300 Sum_probs=59.4
Q ss_pred CCCeeEEeccCH-HHHhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 324 ~~~~~~~~~~p~-~~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
..++.+.++... ..++..+++ +|.... -++++||+++|+|+|+.+..+.+.. +.+....|..+ +..+.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~-~~~~~ 306 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLV-PNGDV 306 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEe-CCCCH
Confidence 355666676333 468888887 776542 4689999999999998765443322 22321277766 34478
Q ss_pred HHHHHHHHHHHhHhHHHHHHHH
Q 044936 399 STIENLVRDLMDNKRDEIMEST 420 (455)
Q Consensus 399 ~~l~~~i~~~l~~~~~~~~~~a 420 (455)
+++.++|.++++| +..+++.
T Consensus 307 ~~~~~~i~~ll~~--~~~~~~~ 326 (348)
T cd03820 307 EALAEALLRLMED--EELRKRM 326 (348)
T ss_pred HHHHHHHHHHHcC--HHHHHHH
Confidence 9999999999986 5544443
No 68
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.32 E-value=4.6e-05 Score=74.65 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=82.8
Q ss_pred CCcEEEEeecCcccC-CHHHHHHHHHHHHhCCCc-EEEEEeCCCCCCCCCCCCCChhhhhhc---CCCeeEEeccCHH--
Q 044936 264 SGTVLYVSFGSFIKL-GREQILEFWHGMVNSGKR-FLWVIRSDLIDGEPGVGPVPVELDQGT---KERGCIVSWAPQE-- 336 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~-~~~~~~~~~~~l~~~~~~-~iw~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~-- 336 (455)
++++|++++|..... ..+.+..+++++...... +.+.+..+... ...+.+ ...+. .+|+.+.+..++.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~----~~~l~~-~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRT----RPRIRE-AGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCCh----HHHHHH-HHHhhccCCCCEEEECCcCHHHH
Confidence 456777888876543 455677788888765332 44443322110 001111 11111 3577777665544
Q ss_pred -HHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 337 -EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 337 -~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
.++..+++ ||+..| |.+.||++.|+|+|.++...+ +..+.+ .|++..+.. +.++|.++|.+++++
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~~~----~~~~~~-~g~~~~~~~--~~~~i~~~i~~ll~~ 337 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDRTE----RPETVE-SGTNVLVGT--DPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCCCc----cchhhh-eeeEEecCC--CHHHHHHHHHHHhcC
Confidence 46777888 999999 778899999999999874322 223334 477766532 589999999999986
No 69
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.30 E-value=0.00013 Score=71.71 Aligned_cols=134 Identities=13% Similarity=0.170 Sum_probs=81.6
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCCCCCCCCCCCChhhhhh--cCCCeeEEeccCHH--
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNS-----GKRFLWVIRSDLIDGEPGVGPVPVELDQG--TKERGCIVSWAPQE-- 336 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~-----~~~~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~-- 336 (455)
.+++++++-.... .+.+..+++++... +.++++...++. ..-..+.+. ..+++.+.+.+++.
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP--------VVREPLHKHLGDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh--------HHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 4565554432221 13466677776653 456666543221 011111111 23578777766654
Q ss_pred -HHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHHH
Q 044936 337 -EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDE 415 (455)
Q Consensus 337 -~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~~ 415 (455)
.++.++++ +|+..|. .+.||+++|+|+|..+..++++. .+ + .|.+..+. .+.++|.+++.+++++ +.
T Consensus 269 ~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e---~~-~-~g~~~lv~--~d~~~i~~ai~~ll~~--~~ 336 (365)
T TIGR00236 269 LNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE---TV-E-AGTNKLVG--TDKENITKAAKRLLTD--PD 336 (365)
T ss_pred HHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH---HH-h-cCceEEeC--CCHHHHHHHHHHHHhC--hH
Confidence 46777777 9998764 47999999999999876565553 22 3 36666552 4789999999999987 66
Q ss_pred HHHHH
Q 044936 416 IMEST 420 (455)
Q Consensus 416 ~~~~a 420 (455)
.+++.
T Consensus 337 ~~~~~ 341 (365)
T TIGR00236 337 EYKKM 341 (365)
T ss_pred HHHHh
Confidence 55554
No 70
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.27 E-value=0.00064 Score=66.23 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=57.1
Q ss_pred cCCCeeEEeccC-HH---HHhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCC
Q 044936 323 TKERGCIVSWAP-QE---EVLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (455)
Q Consensus 323 ~~~~~~~~~~~p-~~---~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~ 394 (455)
...++...+|++ +. .++..+++ +|.... .+++.||+++|+|+|+....+ ....+.+ -+.|..+ .
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~-~~~g~~~-~ 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDH-GVTGYLA-K 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeC-CCceEEe-C
Confidence 446777889998 43 47888888 777543 479999999999999865421 1223323 2466665 3
Q ss_pred CCCHHHHHHHHHHHHhH
Q 044936 395 TCDRSTIENLVRDLMDN 411 (455)
Q Consensus 395 ~~~~~~l~~~i~~~l~~ 411 (455)
..+.+++.+++.+++++
T Consensus 314 ~~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 314 PGDPEDLAEGIEWLLAD 330 (365)
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 44789999999999986
No 71
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.22 E-value=0.001 Score=66.13 Aligned_cols=78 Identities=19% Similarity=0.272 Sum_probs=53.6
Q ss_pred CCCeeEEeccCHHH---Hhhcccccceeeec---Cc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCC
Q 044936 324 KERGCIVSWAPQEE---VLAHQAIGGFLTHS---GW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTC 396 (455)
Q Consensus 324 ~~~~~~~~~~p~~~---ll~~~~~~~~i~hg---G~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~ 396 (455)
.+++...+|+|+.+ ++..+++ +|.-. |+ .++.|||++|+|+|+-+..+- ...+.+ |.+... ..
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i~~--~~~~~~-~~- 318 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVLPP--DMILLA-EP- 318 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhheeC--Cceeec-CC-
Confidence 45688889998644 7888887 66432 33 399999999999999766421 223323 333333 22
Q ss_pred CHHHHHHHHHHHHhH
Q 044936 397 DRSTIENLVRDLMDN 411 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~ 411 (455)
+.+++.+++.+++++
T Consensus 319 ~~~~l~~~l~~~l~~ 333 (398)
T cd03796 319 DVESIVRKLEEAISI 333 (398)
T ss_pred CHHHHHHHHHHHHhC
Confidence 789999999999874
No 72
>PLN00142 sucrose synthase
Probab=98.15 E-value=0.0051 Score=65.17 Aligned_cols=77 Identities=14% Similarity=0.243 Sum_probs=47.8
Q ss_pred CCeeEEe----ccCHHHHhh----cccccceeee---cCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeec
Q 044936 325 ERGCIVS----WAPQEEVLA----HQAIGGFLTH---SGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDM 392 (455)
Q Consensus 325 ~~~~~~~----~~p~~~ll~----~~~~~~~i~h---gG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~ 392 (455)
+++...+ ..+..+++. .+++ ||.- =|+ .++.||+++|+|+|+....+ ....+.+ -..|..+
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~d-G~tG~LV 714 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVD-GVSGFHI 714 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEe
Confidence 4555443 334445543 2344 7754 343 38999999999999865433 3344544 2568777
Q ss_pred CCCCCHHHHHHHHHHHH
Q 044936 393 KDTCDRSTIENLVRDLM 409 (455)
Q Consensus 393 ~~~~~~~~l~~~i~~~l 409 (455)
+ .-+.++++++|.+++
T Consensus 715 ~-P~D~eaLA~aI~~lL 730 (815)
T PLN00142 715 D-PYHGDEAANKIADFF 730 (815)
T ss_pred C-CCCHHHHHHHHHHHH
Confidence 4 347888888887665
No 73
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.15 E-value=0.0028 Score=61.44 Aligned_cols=81 Identities=21% Similarity=0.295 Sum_probs=57.6
Q ss_pred cCCCeeEEeccCHHH---Hhhcccccceeee----------cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceee
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTH----------SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~h----------gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g 389 (455)
.++|+.+.+++|+.+ ++.++++ +|.. |.-++++||+++|+|+|+.+.. +. ...+.+ ...|
T Consensus 234 ~~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~-~~---~~~i~~-~~~g 306 (355)
T cd03799 234 LEDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS-GI---PELVED-GETG 306 (355)
T ss_pred CCCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCC-Cc---chhhhC-CCce
Confidence 357888889998654 7778887 6653 2346899999999999987653 22 223333 2477
Q ss_pred eecCCCCCHHHHHHHHHHHHhH
Q 044936 390 LDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 390 ~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
..+. .-+.+++.++|.+++.+
T Consensus 307 ~~~~-~~~~~~l~~~i~~~~~~ 327 (355)
T cd03799 307 LLVP-PGDPEALADAIERLLDD 327 (355)
T ss_pred EEeC-CCCHHHHHHHHHHHHhC
Confidence 7763 33889999999999985
No 74
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.14 E-value=0.0047 Score=59.90 Aligned_cols=80 Identities=18% Similarity=0.256 Sum_probs=55.8
Q ss_pred cCCCeeEE-eccCHH---HHhhcccccceeee------cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeec
Q 044936 323 TKERGCIV-SWAPQE---EVLAHQAIGGFLTH------SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDM 392 (455)
Q Consensus 323 ~~~~~~~~-~~~p~~---~ll~~~~~~~~i~h------gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~ 392 (455)
..+|+... +|+|+. .++..+++ +|.. +-.+++.||+++|+|+|+.+..+ ...+.+ -+.|..+
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~ 316 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLV 316 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEE
Confidence 34677777 458874 47788887 6632 33458899999999999977644 222333 3667666
Q ss_pred CCCCCHHHHHHHHHHHHhH
Q 044936 393 KDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 393 ~~~~~~~~l~~~i~~~l~~ 411 (455)
. .-+.+++.+++.+++++
T Consensus 317 ~-~~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 317 P-PGDPAALAEAIRRLLAD 334 (366)
T ss_pred c-CCCHHHHHHHHHHHHcC
Confidence 3 33689999999999985
No 75
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.08 E-value=0.0011 Score=63.82 Aligned_cols=128 Identities=12% Similarity=0.023 Sum_probs=75.9
Q ss_pred EEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhh--cCCCeeEEeccCHHH---Hhhcc
Q 044936 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQG--TKERGCIVSWAPQEE---VLAHQ 342 (455)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~---ll~~~ 342 (455)
+.+..|.... .+....+++++.+.+.++++.-..+... .+.....+. ..+++...+++++.+ ++..+
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSDPD------YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCCHH------HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4455676642 2234557777777787876643221000 000111111 257888899999854 67888
Q ss_pred cccceee--ecCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 343 AIGGFLT--HSGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 343 ~~~~~i~--hgG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
++-.+-+ +-|+ .++.|||++|+|+|+.... .....+.+ -..|..++. .+++.+++.+++..
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~~-~~~g~l~~~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVED-GVTGFLVDS---VEELAAAVARADRL 308 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----CchhheeC-CCcEEEeCC---HHHHHHHHHHHhcc
Confidence 8722222 2343 4899999999999986542 22233433 236776633 89999999888663
No 76
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.06 E-value=0.004 Score=62.32 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=54.5
Q ss_pred cCCCeeEEeccCHHH---Hhhcccccceee-----ecCchhHHHHHHhCCceeecCCcchHHHHHHHhh---hhceeeee
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLT-----HSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVS---EIWKIGLD 391 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~-----hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~---~~~g~g~~ 391 (455)
+.+++...+++|+.+ +|..+++ +|+ |-| .++.|||++|+|+|+.-..+.- ...+. + -..|..
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~-g~~G~l 375 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL---LDIVVPWDG-GPTGFL 375 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc---hheeeccCC-CCceEE
Confidence 356888889998764 7888887 654 223 3889999999999986432211 11121 2 256766
Q ss_pred cCCCCCHHHHHHHHHHHHhH
Q 044936 392 MKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 392 ~~~~~~~~~l~~~i~~~l~~ 411 (455)
. . +.++++++|.+++++
T Consensus 376 ~-~--d~~~la~ai~~ll~~ 392 (419)
T cd03806 376 A-S--TAEEYAEAIEKILSL 392 (419)
T ss_pred e-C--CHHHHHHHHHHHHhC
Confidence 5 2 889999999999984
No 77
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.04 E-value=0.0028 Score=60.62 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=71.4
Q ss_pred CCcEEEEeecCccc----CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEE-eccCHHHH
Q 044936 264 SGTVLYVSFGSFIK----LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIV-SWAPQEEV 338 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~----~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~l 338 (455)
+.+.|++-+-+... .....+.++++.|++.+..++..-+.. ..++ +.++. ++.+. .-++-.++
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~---------~~~~-~~~~~--~~~i~~~~vd~~~L 245 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE---------DQRE-LFEKY--GVIIPPEPVDGLDL 245 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc---------chhh-HHhcc--CccccCCCCCHHHH
Confidence 44667777666321 233456778999998877644332211 1111 11111 23333 45566689
Q ss_pred hhcccccceeeecCchhHHHHHHhCCceeec-CCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHH
Q 044936 339 LAHQAIGGFLTHSGWNSTLESMVAGVPMICW-PQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDL 408 (455)
Q Consensus 339 l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~-P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~ 408 (455)
|.++++ +|+=|| ....||...|+|.|.+ | ++-...-+.+.+ .|. .. ..-+.+++.+.|.+.
T Consensus 246 l~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~~~--g~~~~vd~~L~~-~Gl--l~-~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 246 LYYADL--VIGGGG-TMAREAALLGTPAISCFP--GKLLAVDKYLIE-KGL--LY-HSTDPDEIVEYVRKN 307 (335)
T ss_pred HHhcCE--EEeCCc-HHHHHHHHhCCCEEEecC--CcchhHHHHHHH-CCC--eE-ecCCHHHHHHHHHHh
Confidence 999998 999887 7889999999999984 3 221112233434 354 22 344667776655443
No 78
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.00 E-value=0.0064 Score=59.14 Aligned_cols=124 Identities=21% Similarity=0.265 Sum_probs=68.1
Q ss_pred EEEeecCcccCCHHHHHHHHHHHHhCC--CcEEEEEeCCCCCCCCCCCCCChhhh--hhcCCCeeEEeccCHHH---Hhh
Q 044936 268 LYVSFGSFIKLGREQILEFWHGMVNSG--KRFLWVIRSDLIDGEPGVGPVPVELD--QGTKERGCIVSWAPQEE---VLA 340 (455)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~--~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~---ll~ 340 (455)
.++.+|+... ..-+..+++++.... .+++++-+.+. ...+...+. ....+++.+.+++|+.+ ++.
T Consensus 195 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~ivG~~~~------~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~ 266 (363)
T cd04955 195 YYLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVIVGNADH------NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLR 266 (363)
T ss_pred EEEEEecccc--cCCHHHHHHHHHhhccCceEEEEcCCCC------cchHHHHHHHHhCCCCcEEEccccChHHHHHHHH
Confidence 3456787653 222445566666543 55554332110 001111111 12346888889999864 566
Q ss_pred cccccceeeecCc-----hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 341 HQAIGGFLTHSGW-----NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 341 ~~~~~~~i~hgG~-----~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
.+++ ++.+.-. +++.|||++|+|+|+....+ +...+ + ..|..+. ..+.+.++|.+++++
T Consensus 267 ~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~--~~g~~~~---~~~~l~~~i~~l~~~ 330 (363)
T cd04955 267 YAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-G--DKAIYFK---VGDDLASLLEELEAD 330 (363)
T ss_pred hCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-c--CCeeEec---CchHHHHHHHHHHhC
Confidence 6666 6554433 47999999999999865432 11122 2 1233332 112299999999886
No 79
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.99 E-value=0.035 Score=58.93 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=50.4
Q ss_pred CCCeeEEecc-CH---HHHhhc-cc-ccceeeec---C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC
Q 044936 324 KERGCIVSWA-PQ---EEVLAH-QA-IGGFLTHS---G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (455)
Q Consensus 324 ~~~~~~~~~~-p~---~~ll~~-~~-~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~ 393 (455)
.+++...++. +. .+++.+ ++ .+.||.-. | ..+++|||++|+|+|+--.. -....+.+ -..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~d-g~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQD-GVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcC-CCcEEEeC
Confidence 3567666653 32 245543 22 12377532 2 35999999999999986443 23444544 25688774
Q ss_pred CCCCHHHHHHHHHHHH
Q 044936 394 DTCDRSTIENLVRDLM 409 (455)
Q Consensus 394 ~~~~~~~l~~~i~~~l 409 (455)
.-+.++++++|.+++
T Consensus 693 -p~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 -PYHGEEAAEKIVDFF 707 (784)
T ss_pred -CCCHHHHHHHHHHHH
Confidence 347899999998876
No 80
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.91 E-value=0.0034 Score=60.89 Aligned_cols=87 Identities=16% Similarity=0.215 Sum_probs=57.4
Q ss_pred cCCCeeEEeccCHH---HHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 323 TKERGCIVSWAPQE---EVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 323 ~~~~~~~~~~~p~~---~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
..+++...+++|+. .++..+++ +|.. +..+++.||+++|+|+|+....+ ....+ . ..|..+ ..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~-~~ 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYF-DP 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--Cceeee-CC
Confidence 45788888999886 47788887 5533 23458999999999999854421 11112 2 223334 23
Q ss_pred CCHHHHHHHHHHHHhHhHHHHHHHHH
Q 044936 396 CDRSTIENLVRDLMDNKRDEIMESTV 421 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~~~~~~~~~a~ 421 (455)
-+.+++.++|.+++.| +..+.+..
T Consensus 321 ~~~~~~~~~i~~l~~~--~~~~~~~~ 344 (365)
T cd03809 321 LDPEALAAAIERLLED--PALREELR 344 (365)
T ss_pred CCHHHHHHHHHHHhcC--HHHHHHHH
Confidence 3789999999999886 55554433
No 81
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.86 E-value=0.00014 Score=59.11 Aligned_cols=113 Identities=18% Similarity=0.182 Sum_probs=71.9
Q ss_pred cEEEEeecCcccCC---HHHHHHHHHHHHhCCC-cEEEEEeCCCCCCCCCCCCCChhhhhhc-CCCeeE--EeccCH-HH
Q 044936 266 TVLYVSFGSFIKLG---REQILEFWHGMVNSGK-RFLWVIRSDLIDGEPGVGPVPVELDQGT-KERGCI--VSWAPQ-EE 337 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~---~~~~~~~~~~l~~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~p~-~~ 337 (455)
..+||+-||..... --...+..+.|.+.|. +.|..++.+.. ..++...+.. .+...+ .+|-|- .+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-------~~~d~~~~~~k~~gl~id~y~f~psl~e 76 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-------FFGDPIDLIRKNGGLTIDGYDFSPSLTE 76 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-------CCCCHHHhhcccCCeEEEEEecCccHHH
Confidence 46999999977311 1113345667777665 55666654311 1222221111 122222 266776 45
Q ss_pred HhhcccccceeeecCchhHHHHHHhCCceeecCC----cchHHHHHHHhhhhcee
Q 044936 338 VLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ----IGDQQVNSRCVSEIWKI 388 (455)
Q Consensus 338 ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~----~~dq~~na~~~~~~~g~ 388 (455)
....+++ +|+|+|+||++|.|..|+|.|+++. ...|..-|..++++ |.
T Consensus 77 ~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gy 128 (170)
T KOG3349|consen 77 DIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GY 128 (170)
T ss_pred HHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-Cc
Confidence 6667888 9999999999999999999999995 46677788888663 53
No 82
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.84 E-value=0.0037 Score=59.83 Aligned_cols=77 Identities=17% Similarity=0.181 Sum_probs=51.3
Q ss_pred CCCeeEEeccCH-HHHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 324 ~~~~~~~~~~p~-~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
.+++.+.++.++ ..++..+++ +|.- |.-+++.||+++|+|+|+.... .....+.+ -+.|..++ .-+.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~~-~~~~ 316 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLVP-VGDE 316 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEEC-CCCH
Confidence 467778888776 468888888 6643 2356899999999999986443 33445544 36777774 3466
Q ss_pred HHHHHHHHHH
Q 044936 399 STIENLVRDL 408 (455)
Q Consensus 399 ~~l~~~i~~~ 408 (455)
+.+.+.+..+
T Consensus 317 ~~~~~~~~~i 326 (353)
T cd03811 317 AALAAAALAL 326 (353)
T ss_pred HHHHHHHHHH
Confidence 7774444433
No 83
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.79 E-value=0.0055 Score=62.45 Aligned_cols=160 Identities=11% Similarity=0.065 Sum_probs=83.2
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHH--hC--CCcEEEEEeCCCCCCCCCCCCCChhhhhhcCC----CeeEEeccC
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMV--NS--GKRFLWVIRSDLIDGEPGVGPVPVELDQGTKE----RGCIVSWAP 334 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~--~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p 334 (455)
+++++|-+--||-...=...+-.++++.. .. +.+|+...-+. ...+.+.+...+ .+.++.--.
T Consensus 411 ~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~ii~~~~ 481 (608)
T PRK01021 411 SDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANP---------KYDHLILEVLQQEGCLHSHIVPSQF 481 (608)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCch---------hhHHHHHHHHhhcCCCCeEEecCcc
Confidence 45678989999976432233444555554 32 45565533111 001111111211 112221101
Q ss_pred HHHHhhcccccceeeecCchhHHHHHHhCCceeecC-CcchHHHHHHHhhh----hce-----eeeec----C---CCCC
Q 044936 335 QEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWP-QIGDQQVNSRCVSE----IWK-----IGLDM----K---DTCD 397 (455)
Q Consensus 335 ~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P-~~~dq~~na~~~~~----~~g-----~g~~~----~---~~~~ 397 (455)
..+++..+++ .+.-+|. .++|+...|+||+++= ...=-+.-++++.+ ..+ +|..+ - +..|
T Consensus 482 ~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~t 558 (608)
T PRK01021 482 RYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQ 558 (608)
T ss_pred hHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCC
Confidence 2578988887 8888874 7889999999999852 21112334555443 011 11111 1 3678
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCCh
Q 044936 398 RSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSS 437 (455)
Q Consensus 398 ~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~ 437 (455)
++.|.+++ ++|.| +.+|++.++--+.+++...+|.++
T Consensus 559 pe~La~~l-~lL~d--~~~r~~~~~~l~~lr~~Lg~~~~~ 595 (608)
T PRK01021 559 PEEVAAAL-DILKT--SQSKEKQKDACRDLYQAMNESAST 595 (608)
T ss_pred HHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999997 77775 444444444334444444334443
No 84
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.79 E-value=0.0061 Score=59.22 Aligned_cols=163 Identities=18% Similarity=0.187 Sum_probs=94.7
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCCCCCCCCChhhh---hhcCCCeeEE-ecc
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVN-----SGKRFLWVIRSDLIDGEPGVGPVPVELD---QGTKERGCIV-SWA 333 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~-----~~~~~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ 333 (455)
+++++|-+--||-...=...+-.++++... .+.+|++..-+. ...+-+. .....++.+. ..-
T Consensus 182 ~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~~~~~ 252 (373)
T PF02684_consen 182 PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIVIIEG 252 (373)
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEEEcCC
Confidence 467889999999653222223333444332 245666544211 1111011 1112223332 222
Q ss_pred CHHHHhhcccccceeeecCchhHHHHHHhCCceeecCC-cchHHHHHHHhhhhce-eee-------ec-----CCCCCHH
Q 044936 334 PQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ-IGDQQVNSRCVSEIWK-IGL-------DM-----KDTCDRS 399 (455)
Q Consensus 334 p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~-~~dq~~na~~~~~~~g-~g~-------~~-----~~~~~~~ 399 (455)
.-.+++..+++ .+.-+| ..++|+...|+|||++=- ..=-+.-++++.+ .. +|+ .+ .+..|++
T Consensus 253 ~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk-~~~isL~Niia~~~v~PEliQ~~~~~~ 328 (373)
T PF02684_consen 253 ESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVK-VKYISLPNIIAGREVVPELIQEDATPE 328 (373)
T ss_pred chHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhc-CCEeechhhhcCCCcchhhhcccCCHH
Confidence 44678888887 666666 578999999999998632 2223445666544 12 121 11 1578999
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHH
Q 044936 400 TIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRN 440 (455)
Q Consensus 400 ~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~ 440 (455)
.|..++.+++.| +..++..+...+.+++..+.|.++...
T Consensus 329 ~i~~~~~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 329 NIAAELLELLEN--PEKRKKQKELFREIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHHHHHHhcC--HHHHHHHHHHHHHHHHhhhhccCCHHH
Confidence 999999999997 555777777777777776666665543
No 85
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.73 E-value=0.00065 Score=65.85 Aligned_cols=139 Identities=12% Similarity=0.140 Sum_probs=79.8
Q ss_pred CCCcEEEEeecCcccCC-H---HHHHHHHHHHHhC-CCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCH--
Q 044936 263 PSGTVLYVSFGSFIKLG-R---EQILEFWHGMVNS-GKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQ-- 335 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~-~---~~~~~~~~~l~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-- 335 (455)
.+++.++|++=...... + .++.++++++.+. +.++||.+.+++.. . ..+ ....++. +|+.+++-+++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~---~-~~i-~~~l~~~-~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRG---S-DII-IEKLKKY-DNVRLIEPLGYEE 251 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHH---H-HHH-HHHHTT--TTEEEE----HHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchH---H-HHH-HHHhccc-CCEEEECCCCHHH
Confidence 56788999985544444 3 4566667777766 77899988532110 0 011 1111233 58888766555
Q ss_pred -HHHhhcccccceeeecCchhHH-HHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhH
Q 044936 336 -EEVLAHQAIGGFLTHSGWNSTL-ESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKR 413 (455)
Q Consensus 336 -~~ll~~~~~~~~i~hgG~~s~~-eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~ 413 (455)
..+|.++++ +|+..| +++ ||.+.|+|.|.+ -|+...-.-+ . .|..+.+ + .+.++|.+++.+++.+
T Consensus 252 ~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r-~-~~~nvlv-~-~~~~~I~~ai~~~l~~-- 318 (346)
T PF02350_consen 252 YLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGR-E-RGSNVLV-G-TDPEAIIQAIEKALSD-- 318 (346)
T ss_dssp HHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHH-H-TTSEEEE-T-SSHHHHHHHHHHHHH---
T ss_pred HHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHH-h-hcceEEe-C-CCHHHHHHHHHHHHhC--
Confidence 558889888 999999 666 999999999998 2222222222 2 2555554 3 6899999999999985
Q ss_pred HHHHHHH
Q 044936 414 DEIMEST 420 (455)
Q Consensus 414 ~~~~~~a 420 (455)
....++.
T Consensus 319 ~~~~~~~ 325 (346)
T PF02350_consen 319 KDFYRKL 325 (346)
T ss_dssp HHHHHHH
T ss_pred hHHHHhh
Confidence 3444443
No 86
>PLN02949 transferase, transferring glycosyl groups
Probab=97.72 E-value=0.054 Score=54.78 Aligned_cols=80 Identities=14% Similarity=0.108 Sum_probs=52.2
Q ss_pred cCCCeeEEeccCHHH---Hhhcccccceee---ecCch-hHHHHHHhCCceeecCCcchHHHHHHHhhhh-ce-eeeecC
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLT---HSGWN-STLESMVAGVPMICWPQIGDQQVNSRCVSEI-WK-IGLDMK 393 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~~dq~~na~~~~~~-~g-~g~~~~ 393 (455)
+.+++...+++|+.+ +|..+++ +|+ +=|+| ++.|||++|+|+|+....+--. ..+.+. -| .|...
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~- 406 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA- 406 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC-
Confidence 357888889998754 6778877 663 22333 7999999999999976432100 001110 01 34333
Q ss_pred CCCCHHHHHHHHHHHHh
Q 044936 394 DTCDRSTIENLVRDLMD 410 (455)
Q Consensus 394 ~~~~~~~l~~~i~~~l~ 410 (455)
. +.++++++|.+++.
T Consensus 407 ~--~~~~la~ai~~ll~ 421 (463)
T PLN02949 407 T--TVEEYADAILEVLR 421 (463)
T ss_pred C--CHHHHHHHHHHHHh
Confidence 2 78999999999997
No 87
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.71 E-value=0.027 Score=54.64 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=58.5
Q ss_pred cCCCeeEEeccCH-HHHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 323 TKERGCIVSWAPQ-EEVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 323 ~~~~~~~~~~~p~-~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
..+++...++..+ ..++..+++ +|.- |--++++|||++|+|+|+-...+ ....+.+ +.+..+. .-+
T Consensus 247 ~~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~-~~~ 317 (358)
T cd03812 247 LEDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSL-DES 317 (358)
T ss_pred CCCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeC-CCC
Confidence 3467777777555 568888888 6654 33578999999999999865433 2233322 4444442 235
Q ss_pred HHHHHHHHHHHHhHhHHHHHHH
Q 044936 398 RSTIENLVRDLMDNKRDEIMES 419 (455)
Q Consensus 398 ~~~l~~~i~~~l~~~~~~~~~~ 419 (455)
.++++++|.+++++ +..+++
T Consensus 318 ~~~~a~~i~~l~~~--~~~~~~ 337 (358)
T cd03812 318 PEIWAEEILKLKSE--DRRERS 337 (358)
T ss_pred HHHHHHHHHHHHhC--cchhhh
Confidence 79999999999997 554444
No 88
>PLN02275 transferase, transferring glycosyl groups
Probab=97.61 E-value=0.045 Score=53.77 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=51.6
Q ss_pred CCeeEE-eccCHHH---Hhhcccccceee----ecC---chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC
Q 044936 325 ERGCIV-SWAPQEE---VLAHQAIGGFLT----HSG---WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (455)
Q Consensus 325 ~~~~~~-~~~p~~~---ll~~~~~~~~i~----hgG---~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~ 393 (455)
+|+... .|+|+.+ +|..+++ ||. ..| -++++||+++|+|+|+.... .+...+.+ -+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~-g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKD-GKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccC-CCCeEEEC
Confidence 455554 4788865 5888888 763 112 34799999999999996532 24455544 36888874
Q ss_pred CCCCHHHHHHHHHHHH
Q 044936 394 DTCDRSTIENLVRDLM 409 (455)
Q Consensus 394 ~~~~~~~l~~~i~~~l 409 (455)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 5788888887653
No 89
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.59 E-value=0.14 Score=54.21 Aligned_cols=94 Identities=21% Similarity=0.243 Sum_probs=62.8
Q ss_pred cCCCeeEEeccCH-HHHhhcccccceee---ecC-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-CCC
Q 044936 323 TKERGCIVSWAPQ-EEVLAHQAIGGFLT---HSG-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTC 396 (455)
Q Consensus 323 ~~~~~~~~~~~p~-~~ll~~~~~~~~i~---hgG-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~-~~~ 396 (455)
+.+++.+.+|.++ ..+|..+++ ||. +-| -++++|||.+|+|+|+....+ ....+.+ -..|..+. ++.
T Consensus 572 L~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~d-g~~GlLv~~~d~ 644 (694)
T PRK15179 572 MGERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQE-GVTGLTLPADTV 644 (694)
T ss_pred CCCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccC-CCCEEEeCCCCC
Confidence 3467888898876 458888888 665 344 568999999999999976432 3344544 24687776 556
Q ss_pred CHHHHHHHHHHHHhH--hHHHHHHHHHHH
Q 044936 397 DRSTIENLVRDLMDN--KRDEIMESTVKI 423 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~--~~~~~~~~a~~~ 423 (455)
+.+++.+++.+++.+ ..+.+++++++.
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 677788887776651 114565555443
No 90
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.59 E-value=0.0021 Score=63.82 Aligned_cols=154 Identities=20% Similarity=0.271 Sum_probs=79.3
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhh--hcCCCeeEEeccCHHHHh-
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQ--GTKERGCIVSWAPQEEVL- 339 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~ll- 339 (455)
++..++|.||.+.....++.+...++-|.+.+...+|..+.+... . ..+-..+.+ --++++.+.++.|+.+-|
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~---~-~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~ 357 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG---E-ARLRRRFAAHGVDPDRIIFSPVAPREEHLR 357 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH---H-HHHHHHHHHTTS-GGGEEEEE---HHHHHH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH---H-HHHHHHHHHcCCChhhEEEcCCCCHHHHHH
Confidence 466799999999999999999999999999999999987643111 0 001011110 013567777887775543
Q ss_pred --hccccccee---eecCchhHHHHHHhCCceeecCCcchHHHHH-HHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhH
Q 044936 340 --AHQAIGGFL---THSGWNSTLESMVAGVPMICWPQIGDQQVNS-RCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKR 413 (455)
Q Consensus 340 --~~~~~~~~i---~hgG~~s~~eal~~GvP~l~~P~~~dq~~na-~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~ 413 (455)
...++ ++ ..+|.+|++|||+.|||+|.+|--.=.-..+ ..+ ..+|+...+..+ ..+-+..|| ++-+|
T Consensus 358 ~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA~s-~~eYv~~Av-~La~D-- 430 (468)
T PF13844_consen 358 RYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIADS-EEEYVEIAV-RLATD-- 430 (468)
T ss_dssp HGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB-SS-HHHHHHHHH-HHHH---
T ss_pred HhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcCCC-HHHHHHHHH-HHhCC--
Confidence 44554 55 3468899999999999999999532222233 334 336777665332 233444444 34444
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044936 414 DEIMESTVKIAKMARDA 430 (455)
Q Consensus 414 ~~~~~~a~~~~~~~~~~ 430 (455)
..++++ ++..+++.
T Consensus 431 ~~~l~~---lR~~Lr~~ 444 (468)
T PF13844_consen 431 PERLRA---LRAKLRDR 444 (468)
T ss_dssp HHHHHH---HHHHHHHH
T ss_pred HHHHHH---HHHHHHHH
Confidence 444433 44444444
No 91
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.56 E-value=0.0031 Score=62.81 Aligned_cols=111 Identities=18% Similarity=0.208 Sum_probs=72.3
Q ss_pred CCeeEEeccCHHH---HhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 325 ERGCIVSWAPQEE---VLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 325 ~~~~~~~~~p~~~---ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
.++...+|+++.+ ++..+++.+||...- -++++|||++|+|+|+-...+ ....+.+ -+.|..+...-+
T Consensus 289 ~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~-~~~G~l~~~~~~ 363 (407)
T cd04946 289 ISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDN-GGNGLLLSKDPT 363 (407)
T ss_pred ceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcC-CCcEEEeCCCCC
Confidence 4677789999865 555444445776553 458999999999999854322 3445544 247877754457
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Q 044936 398 RSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLI 445 (455)
Q Consensus 398 ~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~ 445 (455)
.+++.++|.++++| +..++ ++++..++.+++.=+......+|+
T Consensus 364 ~~~la~~I~~ll~~--~~~~~---~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQ---TMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHH---HHHHHHHHHHHHHcCHHHhHHHhc
Confidence 89999999999985 44332 345555555444445455555543
No 92
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.47 E-value=0.0017 Score=58.96 Aligned_cols=141 Identities=11% Similarity=0.118 Sum_probs=98.2
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhh--cCCCeeEEeccCH-HHHhhccc
Q 044936 267 VLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQG--TKERGCIVSWAPQ-EEVLAHQA 343 (455)
Q Consensus 267 vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~-~~ll~~~~ 343 (455)
-|+|++|..- +....-.++..|.+.++.+-.+++.. ......+..+ ..+|+.+...... ..++..++
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~--------~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS--------NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC--------CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 3899998743 55667778888888776665666421 1122222221 2356665544443 46999988
Q ss_pred ccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 044936 344 IGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDEIMESTVKI 423 (455)
Q Consensus 344 ~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~ 423 (455)
. .|+-+| .|++|++..|+|.+++|+...|--.|..... +|+-..+.=.++......-+.+++.| ...|.+.-..
T Consensus 230 ~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~~l~~~~~~~~~~~i~~d--~~~rk~l~~~ 303 (318)
T COG3980 230 L--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGYHLKDLAKDYEILQIQKD--YARRKNLSFG 303 (318)
T ss_pred h--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccCCCchHHHHHHHHHhhhC--HHHhhhhhhc
Confidence 8 999888 5999999999999999999999999988865 68777765136777777777788877 6666554333
No 93
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.41 E-value=0.0088 Score=59.57 Aligned_cols=112 Identities=19% Similarity=0.248 Sum_probs=70.6
Q ss_pred cCCCeeEEeccCHHH---Hhhcccccceeeec---------Cc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceee
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHS---------GW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~hg---------G~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g 389 (455)
+.+++.+.+|+|+.+ ++..+++ ||.-+ |. ++++|||++|+|+|+....+ ....+.+ -..|
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G 349 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSG 349 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCce
Confidence 346788889999864 7788888 76532 44 57899999999999965432 2334433 2567
Q ss_pred eecCCCCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 044936 390 LDMKDTCDRSTIENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIED 447 (455)
Q Consensus 390 ~~~~~~~~~~~l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~ 447 (455)
..++ .-+.+++.++|.++++ | +..+ +++++..++.+...=+.....+++.+-
T Consensus 350 ~lv~-~~d~~~la~ai~~l~~~d--~~~~---~~~~~~ar~~v~~~f~~~~~~~~l~~~ 402 (406)
T PRK15427 350 WLVP-ENDAQALAQRLAAFSQLD--TDEL---APVVKRAREKVETDFNQQVINRELASL 402 (406)
T ss_pred EEeC-CCCHHHHHHHHHHHHhCC--HHHH---HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7774 3478999999999998 6 4432 223344444333233333444444443
No 94
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.39 E-value=0.017 Score=57.07 Aligned_cols=82 Identities=17% Similarity=0.265 Sum_probs=58.8
Q ss_pred cCCCeeEEeccCHHH---Hhhcccccceeeec----Cc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCC
Q 044936 323 TKERGCIVSWAPQEE---VLAHQAIGGFLTHS----GW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~---ll~~~~~~~~i~hg----G~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~ 394 (455)
...++.+.+++|+.+ ++..+++ ||... |+ .+++|||++|+|+|+....+ +...+.+ -..|..+..
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~-~~~G~~l~~ 327 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLE-GITGYHLAE 327 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhccc-CCceEEEeC
Confidence 456777889998654 6888888 77543 32 57889999999999976532 3334434 256764434
Q ss_pred CCCHHHHHHHHHHHHhH
Q 044936 395 TCDRSTIENLVRDLMDN 411 (455)
Q Consensus 395 ~~~~~~l~~~i~~~l~~ 411 (455)
..+.+++.++|.++++|
T Consensus 328 ~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 328 PMTSDSIISDINRTLAD 344 (380)
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 45899999999999987
No 95
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.34 E-value=0.0066 Score=52.29 Aligned_cols=81 Identities=22% Similarity=0.351 Sum_probs=61.2
Q ss_pred cCCCeeEEeccCH---HHHhhcccccceeee----cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCC
Q 044936 323 TKERGCIVSWAPQ---EEVLAHQAIGGFLTH----SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDT 395 (455)
Q Consensus 323 ~~~~~~~~~~~p~---~~ll~~~~~~~~i~h----gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~ 395 (455)
..+++.+.++.++ ..++..+++ +|+. +...++.||+++|+|+|+. |...+...+.+ .+.|..++..
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~~ 143 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDPN 143 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEESTT
T ss_pred cccccccccccccccccccccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCCC
Confidence 4578888999883 358888888 8877 5567999999999999984 45555666655 4678888533
Q ss_pred CCHHHHHHHHHHHHhH
Q 044936 396 CDRSTIENLVRDLMDN 411 (455)
Q Consensus 396 ~~~~~l~~~i~~~l~~ 411 (455)
+.+++.++|.+++++
T Consensus 144 -~~~~l~~~i~~~l~~ 158 (172)
T PF00534_consen 144 -DIEELADAIEKLLND 158 (172)
T ss_dssp -SHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHCC
Confidence 999999999999997
No 96
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.32 E-value=0.0013 Score=64.02 Aligned_cols=124 Identities=18% Similarity=0.246 Sum_probs=82.0
Q ss_pred EEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHH---HHhhcccc
Q 044936 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQE---EVLAHQAI 344 (455)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~ll~~~~~ 344 (455)
.++..|++.. ...+..+++++...+.+++++-+++ ..+.+.+...+|+.+.+++|+. .++..+++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~----------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP----------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh----------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCE
Confidence 3456677652 2336667788887777766543211 1123333456889999999985 47888887
Q ss_pred cceee--ecCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 345 GGFLT--HSGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 345 ~~~i~--hgG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
+|. .-|+ .++.|||++|+|+|+....+ ....+.+ -+.|..++ .-+.+++.++|.+++++
T Consensus 265 --~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~-~~~~~~la~~i~~l~~~ 326 (351)
T cd03804 265 --FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFE-EQTVESLAAAVERFEKN 326 (351)
T ss_pred --EEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeC-CCCHHHHHHHHHHHHhC
Confidence 553 3333 46789999999999976433 2233434 25777774 33788999999999886
No 97
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.29 E-value=0.003 Score=61.83 Aligned_cols=128 Identities=16% Similarity=0.199 Sum_probs=76.9
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhCC--CcEEEEEeCCCCCCCCCCCCCChhhhh-----hcCCCeeEEeccCH--H
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNSG--KRFLWVIRSDLIDGEPGVGPVPVELDQ-----GTKERGCIVSWAPQ--E 336 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~--~~~iw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~--~ 336 (455)
+.+++..|.........+..+++++.... .++++ ++.. . .-+.+.+ .+++++...+|.++ .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~i-vG~g------~---~~~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHI-IGDG------S---DFEKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEE-EeCC------c---cHHHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 34667778765322333566777776653 34443 3321 1 1111211 23568888898754 2
Q ss_pred ---HHhhcccccceeeec----CchhHHHHHHhCCceeecC-CcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHH
Q 044936 337 ---EVLAHQAIGGFLTHS----GWNSTLESMVAGVPMICWP-QIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDL 408 (455)
Q Consensus 337 ---~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P-~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~ 408 (455)
+.+..+++ +|... --.++.|||++|+|+|+.- ..+ ....+.+ -..|..+ ..-+.+++.++|.++
T Consensus 250 ~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv-~~~d~~~la~~i~~l 321 (359)
T PRK09922 250 VVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELY-TPGNIDEFVGKLNKV 321 (359)
T ss_pred HHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEE-CCCCHHHHHHHHHHH
Confidence 24455666 66532 2579999999999999975 322 1123433 3567776 345899999999999
Q ss_pred HhH
Q 044936 409 MDN 411 (455)
Q Consensus 409 l~~ 411 (455)
+++
T Consensus 322 ~~~ 324 (359)
T PRK09922 322 ISG 324 (359)
T ss_pred HhC
Confidence 986
No 98
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.08 E-value=0.15 Score=51.13 Aligned_cols=72 Identities=13% Similarity=0.151 Sum_probs=50.3
Q ss_pred EEeccCHHHHhhcccccceeeec----CchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHH
Q 044936 329 IVSWAPQEEVLAHQAIGGFLTHS----GWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENL 404 (455)
Q Consensus 329 ~~~~~p~~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~ 404 (455)
..++.+..+++...++ ||.-+ =.++++|||++|+|+|+.-..+ | ..+.+ -+.|... -+.+++.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~---~~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTY---DDGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEec---CCHHHHHHH
Confidence 3466666779988887 98774 3568999999999999965332 2 22323 2444444 267899999
Q ss_pred HHHHHhH
Q 044936 405 VRDLMDN 411 (455)
Q Consensus 405 i~~~l~~ 411 (455)
+.++|.+
T Consensus 357 i~~~l~~ 363 (462)
T PLN02846 357 TLKALAE 363 (462)
T ss_pred HHHHHcc
Confidence 9999874
No 99
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.07 E-value=0.027 Score=55.19 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=78.9
Q ss_pred CcEEEEeecCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhc--CCCeeEEeccCH---H
Q 044936 265 GTVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGT--KERGCIVSWAPQ---E 336 (455)
Q Consensus 265 ~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~---~ 336 (455)
++.++|.+=... ..+.+.+..+++++...+.++++.+..... +.. .+-+.+.+.. .+|+.+.+-++. .
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p---~~~-~i~~~i~~~~~~~~~v~l~~~l~~~~~l 276 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADA---GSR-IINEAIEEYVNEHPNFRLFKSLGQERYL 276 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCC---Cch-HHHHHHHHHhcCCCCEEEECCCChHHHH
Confidence 467778775532 245677999999998877666665532210 000 0111111111 357888765554 4
Q ss_pred HHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeee-cCCCCCHHHHHHHHHHHHh
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLD-MKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~-~~~~~~~~~l~~~i~~~l~ 410 (455)
.++.++++ +|+.++.+. .||.+.|+|.|.+- +-+ ..+ + .|..+. + ..+.++|.+++.++++
T Consensus 277 ~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~-~g~nvl~v--g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 277 SLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-L-RADSVIDV--DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-h-hcCeEEEe--CCCHHHHHHHHHHHhC
Confidence 58889888 999986555 99999999999763 211 111 2 243333 3 3478999999998544
No 100
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.99 E-value=0.032 Score=53.66 Aligned_cols=78 Identities=18% Similarity=0.285 Sum_probs=53.7
Q ss_pred CCCeeEEeccCH-HHHhhcccccceeeecCc----hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTHSGW----NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 324 ~~~~~~~~~~p~-~~ll~~~~~~~~i~hgG~----~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
.+++.+.+...+ ..++..+++ +|....+ +++.||+++|+|+|+.... .+...+.+ .|..+. .-+.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~---~g~~~~-~~~~ 319 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD---TGFLVP-PGDP 319 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc---CCEEeC-CCCH
Confidence 345666655444 468888888 7765543 7999999999999985443 23334423 444443 3368
Q ss_pred HHHHHHHHHHHhH
Q 044936 399 STIENLVRDLMDN 411 (455)
Q Consensus 399 ~~l~~~i~~~l~~ 411 (455)
+++.++|.+++++
T Consensus 320 ~~l~~~i~~l~~~ 332 (365)
T cd03807 320 EALAEAIEALLAD 332 (365)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999986
No 101
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.0056 Score=49.04 Aligned_cols=105 Identities=14% Similarity=0.184 Sum_probs=63.0
Q ss_pred EEEeecCcccCCHHHHHH---HHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCe-eEEecc--CH-HHHhh
Q 044936 268 LYVSFGSFIKLGREQILE---FWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERG-CIVSWA--PQ-EEVLA 340 (455)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~---~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--p~-~~ll~ 340 (455)
+||+-||.. .+-..... +..-.+.-..++|..++.. ...| -|+ .+.+|. +- ..+..
T Consensus 2 ifVTvGstf-~~f~rlv~k~e~~el~~~i~e~lIvQyGn~--------d~kp--------vagl~v~~F~~~~kiQsli~ 64 (161)
T COG5017 2 IFVTVGSTF-YPFNRLVLKIEVLELTELIQEELIVQYGNG--------DIKP--------VAGLRVYGFDKEEKIQSLIH 64 (161)
T ss_pred eEEEecCcc-chHHHHHhhHHHHHHHHHhhhheeeeecCC--------Cccc--------ccccEEEeechHHHHHHHhh
Confidence 789999983 22222111 1111112234678777532 1222 233 455543 33 34667
Q ss_pred cccccceeeecCchhHHHHHHhCCceeecCCcc--------hHHHHHHHhhhhceeeeec
Q 044936 341 HQAIGGFLTHSGWNSTLESMVAGVPMICWPQIG--------DQQVNSRCVSEIWKIGLDM 392 (455)
Q Consensus 341 ~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~--------dq~~na~~~~~~~g~g~~~ 392 (455)
.+++ +|+|||.||++.++..++|.|++|-.. .|..-|..+++ .+.=+..
T Consensus 65 darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~ 121 (161)
T COG5017 65 DARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVAC 121 (161)
T ss_pred cceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEE
Confidence 7777 999999999999999999999999632 34556666655 4544433
No 102
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.95 E-value=0.014 Score=56.41 Aligned_cols=144 Identities=10% Similarity=0.043 Sum_probs=84.7
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhCCCc-EEEEEeCCCCCCCCCCCCCChhhhhhcCC--CeeEEeccCHHHHhhcc
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNSGKR-FLWVIRSDLIDGEPGVGPVPVELDQGTKE--RGCIVSWAPQEEVLAHQ 342 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~-~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~ll~~~ 342 (455)
++|.+--||....-...+-.+.++......+ ..+.+... . .. +.+.+...+ ...+.+ .-.+++..+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a-------~-~~-~~i~~~~~~~~~~~~~~--~~~~~m~~a 236 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSF-------F-KG-KDLKEIYGDISEFEISY--DTHKALLEA 236 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCC-------C-cH-HHHHHHHhcCCCcEEec--cHHHHHHhh
Confidence 6788999997643333444344544433221 22222211 0 01 222221211 222222 335789998
Q ss_pred cccceeeecCchhHHHHHHhCCceeecCC--cchHHHHHHHhhh--hceeeeec-------------C-CCCCHHHHHHH
Q 044936 343 AIGGFLTHSGWNSTLESMVAGVPMICWPQ--IGDQQVNSRCVSE--IWKIGLDM-------------K-DTCDRSTIENL 404 (455)
Q Consensus 343 ~~~~~i~hgG~~s~~eal~~GvP~l~~P~--~~dq~~na~~~~~--~~g~g~~~-------------~-~~~~~~~l~~~ 404 (455)
++ .|+-+|..|+ |++..|+|+|+ ++ ..-|+.||+++.+ ..|....+ . +.+|++.|.++
T Consensus 237 Dl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~ 312 (347)
T PRK14089 237 EF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKA 312 (347)
T ss_pred hH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHH
Confidence 88 9999999998 99999999998 44 3457889998862 24544333 2 57889999998
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHH
Q 044936 405 VRDLMDNKRDEIMESTVKIAKMA 427 (455)
Q Consensus 405 i~~~l~~~~~~~~~~a~~~~~~~ 427 (455)
+.+ ... +.+++...++++.+
T Consensus 313 i~~-~~~--~~~~~~~~~l~~~l 332 (347)
T PRK14089 313 YKE-MDR--EKFFKKSKELREYL 332 (347)
T ss_pred HHH-HHH--HHHHHHHHHHHHHh
Confidence 876 222 45555555555554
No 103
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.87 E-value=0.021 Score=55.98 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=55.0
Q ss_pred CCeeEEeccCH-HHHhhcccccceee--e--cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHH
Q 044936 325 ERGCIVSWAPQ-EEVLAHQAIGGFLT--H--SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (455)
Q Consensus 325 ~~~~~~~~~p~-~~ll~~~~~~~~i~--h--gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~ 399 (455)
+++.+.++..+ ..++..+++ +|. + |--++++|||++|+|+|+-...+ +...+.+ -..|..++ .-+.+
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~-~~~g~~~~-~~d~~ 326 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQH-GVTGALVP-PGDAV 326 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcC-CCceEEeC-CCCHH
Confidence 45555565444 568999888 663 2 33569999999999999966532 3334433 24677663 34789
Q ss_pred HHHHHHHHHHhH
Q 044936 400 TIENLVRDLMDN 411 (455)
Q Consensus 400 ~l~~~i~~~l~~ 411 (455)
++.++|.+++++
T Consensus 327 ~la~~i~~l~~~ 338 (374)
T TIGR03088 327 ALARALQPYVSD 338 (374)
T ss_pred HHHHHHHHHHhC
Confidence 999999999885
No 104
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.71 E-value=0.012 Score=56.95 Aligned_cols=112 Identities=18% Similarity=0.344 Sum_probs=76.3
Q ss_pred cCCCeeEEeccCHHHHhhcc--cccceeee-------cCc------hhHHHHHHhCCceeecCCcchHHHHHHHhhhhce
Q 044936 323 TKERGCIVSWAPQEEVLAHQ--AIGGFLTH-------SGW------NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWK 387 (455)
Q Consensus 323 ~~~~~~~~~~~p~~~ll~~~--~~~~~i~h-------gG~------~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g 387 (455)
..+|+...+|+|+.++..+- +.+.+... +.+ +-+.+.|++|+|+|+++. ...+..+.+ -+
T Consensus 205 ~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~----~~~~~~V~~-~~ 279 (333)
T PRK09814 205 NSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSK----AAIADFIVE-NG 279 (333)
T ss_pred cCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCC----ccHHHHHHh-CC
Confidence 45789899999998754321 33222211 111 126778999999999653 445566755 58
Q ss_pred eeeecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Q 044936 388 IGLDMKDTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIE 446 (455)
Q Consensus 388 ~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~ 446 (455)
+|..++ +.+++.+++.++..++...+++||+++++.+++ |.--.+.+.+++.
T Consensus 280 ~G~~v~---~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD---SLEELPEIIDNITEEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC---CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 999984 668899999887666567899999999999886 5544555555543
No 105
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.70 E-value=0.049 Score=53.64 Aligned_cols=131 Identities=15% Similarity=0.189 Sum_probs=73.4
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCCCCCCCCChhhhh---hc---CCCeeE-EeccCHH
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNS--GKRFLWVIRSDLIDGEPGVGPVPVELDQ---GT---KERGCI-VSWAPQE 336 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~--~~~~iw~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~-~~~~p~~ 336 (455)
..+++..|.... ..-+..+++++... +..+++..+..... .+.+.+.+ .. .+++.. .+++++.
T Consensus 201 ~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (388)
T TIGR02149 201 RPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTP------EVAEEVRQAVALLDRNRTGIIWINKMLPKE 272 (388)
T ss_pred ceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcH------HHHHHHHHHHHHhccccCceEEecCCCCHH
Confidence 345666777652 22345556666554 45555544321100 11111111 11 123443 3677764
Q ss_pred ---HHhhcccccceeeec---C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-CCCC----HHHHHHH
Q 044936 337 ---EVLAHQAIGGFLTHS---G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCD----RSTIENL 404 (455)
Q Consensus 337 ---~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~-~~~~----~~~l~~~ 404 (455)
.++.++++ ||.-. | ..+++||+++|+|+|+.... .....+.+ -+.|..++ +..+ .+++.++
T Consensus 273 ~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~-~~~G~~~~~~~~~~~~~~~~l~~~ 345 (388)
T TIGR02149 273 ELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVD-GETGFLVPPDNSDADGFQAELAKA 345 (388)
T ss_pred HHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhC-CCceEEcCCCCCcccchHHHHHHH
Confidence 47888888 77532 2 35779999999999996543 23444544 35677775 3221 2789999
Q ss_pred HHHHHhH
Q 044936 405 VRDLMDN 411 (455)
Q Consensus 405 i~~~l~~ 411 (455)
|.++++|
T Consensus 346 i~~l~~~ 352 (388)
T TIGR02149 346 INILLAD 352 (388)
T ss_pred HHHHHhC
Confidence 9998885
No 106
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=96.65 E-value=0.035 Score=53.77 Aligned_cols=85 Identities=13% Similarity=0.179 Sum_probs=57.3
Q ss_pred CCCeeEEeccCH-HHHhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 324 ~~~~~~~~~~p~-~~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
.+|+.+.++..+ ..++..+++ +|.-.. .+++.||+++|+|+|+. |...+...+.+ .|. .+ ..-+.
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~--~~-~~~~~ 313 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGL--IV-PISDP 313 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-Cce--Ee-CCCCH
Confidence 457778877655 468988888 665432 56899999999999984 33344444433 344 33 23578
Q ss_pred HHHHHHHHHHHh-HhHHHHHHHH
Q 044936 399 STIENLVRDLMD-NKRDEIMEST 420 (455)
Q Consensus 399 ~~l~~~i~~~l~-~~~~~~~~~a 420 (455)
+++.+++.++++ + +.+++..
T Consensus 314 ~~~~~~i~~ll~~~--~~~~~~~ 334 (360)
T cd04951 314 EALANKIDEILKMS--GEERDII 334 (360)
T ss_pred HHHHHHHHHHHhCC--HHHHHHH
Confidence 999999999985 3 4444433
No 107
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.60 E-value=0.076 Score=52.68 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=56.4
Q ss_pred CCCeeEEeccCHH-HHhhccccccee--ee--cCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 324 KERGCIVSWAPQE-EVLAHQAIGGFL--TH--SGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 324 ~~~~~~~~~~p~~-~ll~~~~~~~~i--~h--gG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
.+++.+.+++++. .++.++++ || ++ .|. +.+.|||++|+|+|+.+...+. +...-|.|..+. -+
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~--~~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVA--AD 348 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEeC--CC
Confidence 3578888999874 58889888 66 32 344 3699999999999998753221 111135676663 48
Q ss_pred HHHHHHHHHHHHhH
Q 044936 398 RSTIENLVRDLMDN 411 (455)
Q Consensus 398 ~~~l~~~i~~~l~~ 411 (455)
.+++.++|.++++|
T Consensus 349 ~~~la~ai~~ll~~ 362 (397)
T TIGR03087 349 PADFAAAILALLAN 362 (397)
T ss_pred HHHHHHHHHHHHcC
Confidence 89999999999986
No 108
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.53 E-value=0.92 Score=44.56 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=51.3
Q ss_pred CCCeeEEeccCHHH---Hhhccccccee------eecCc-hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC
Q 044936 324 KERGCIVSWAPQEE---VLAHQAIGGFL------THSGW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK 393 (455)
Q Consensus 324 ~~~~~~~~~~p~~~---ll~~~~~~~~i------~hgG~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~ 393 (455)
.+|+...+++|+.+ .+.++++..+- +.++. +.++|+|++|+|+|+.++ ...+ +..+.+...
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~- 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLI- 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEe-
Confidence 37899999999765 67888883321 12222 358999999999998763 1112 212323333
Q ss_pred CCCCHHHHHHHHHHHHhH
Q 044936 394 DTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 394 ~~~~~~~l~~~i~~~l~~ 411 (455)
. -+.+++.++|.+++.+
T Consensus 324 ~-~d~~~~~~ai~~~l~~ 340 (373)
T cd04950 324 A-DDPEEFVAAIEKALLE 340 (373)
T ss_pred C-CCHHHHHHHHHHHHhc
Confidence 2 2799999999998763
No 109
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.46 E-value=0.016 Score=47.62 Aligned_cols=80 Identities=23% Similarity=0.297 Sum_probs=48.7
Q ss_pred CCCeeEEeccCH-HHHhhcccccceeeec--C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHH
Q 044936 324 KERGCIVSWAPQ-EEVLAHQAIGGFLTHS--G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (455)
Q Consensus 324 ~~~~~~~~~~p~-~~ll~~~~~~~~i~hg--G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~ 399 (455)
.+|+...+|++. .+++..+++....+.. | -+.+.|++.+|+|+|+.+. ........ .+.|..+ .-+.+
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~-~~~~~~~--~~~~~ 123 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEE-DGCGVLV--ANDPE 123 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE---TT-HH
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheee-cCCeEEE--CCCHH
Confidence 468999999865 4588999985554422 2 4899999999999999654 11112222 4677666 33899
Q ss_pred HHHHHHHHHHhH
Q 044936 400 TIENLVRDLMDN 411 (455)
Q Consensus 400 ~l~~~i~~~l~~ 411 (455)
++.++|.++++|
T Consensus 124 ~l~~~i~~l~~d 135 (135)
T PF13692_consen 124 ELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHHhcC
Confidence 999999998874
No 110
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.45 E-value=0.029 Score=54.97 Aligned_cols=84 Identities=14% Similarity=0.216 Sum_probs=57.6
Q ss_pred cCCCeeEEeccCH-HHHhhcccccceeeec--CchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHH
Q 044936 323 TKERGCIVSWAPQ-EEVLAHQAIGGFLTHS--GWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (455)
Q Consensus 323 ~~~~~~~~~~~p~-~~ll~~~~~~~~i~hg--G~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~ 399 (455)
..+++.+.++.++ ..++..+++-.+.++. ...++.||+++|+|+|+...... ....+.+ -..|..+ ..-+.+
T Consensus 259 ~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v~~-~~~G~lv-~~~d~~ 333 (372)
T cd04949 259 LEDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEIIED-GENGYLV-PKGDIE 333 (372)
T ss_pred CcceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHccc-CCCceEe-CCCcHH
Confidence 3456777777666 4588998884444442 34589999999999998643211 2233434 3577777 334789
Q ss_pred HHHHHHHHHHhH
Q 044936 400 TIENLVRDLMDN 411 (455)
Q Consensus 400 ~l~~~i~~~l~~ 411 (455)
++.++|.+++.+
T Consensus 334 ~la~~i~~ll~~ 345 (372)
T cd04949 334 ALAEAIIELLND 345 (372)
T ss_pred HHHHHHHHHHcC
Confidence 999999999986
No 111
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.10 E-value=0.092 Score=53.67 Aligned_cols=96 Identities=19% Similarity=0.230 Sum_probs=61.5
Q ss_pred CCCeeEEeccCHHHHhhcccccceeeec---C-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-C--CC
Q 044936 324 KERGCIVSWAPQEEVLAHQAIGGFLTHS---G-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-D--TC 396 (455)
Q Consensus 324 ~~~~~~~~~~p~~~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~-~--~~ 396 (455)
.+++...++.+...++..+++ ||.-. | ..+++||+++|+|+|+.-..+ .+...+.+ -..|..+. . .-
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~-g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIED-NKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccC-CCCEEEEeCCcccc
Confidence 356777788888889999888 77532 3 358999999999999965421 12233433 24566653 1 12
Q ss_pred C----HHHHHHHHHHHHhH-hHHHHHHHHHHHHH
Q 044936 397 D----RSTIENLVRDLMDN-KRDEIMESTVKIAK 425 (455)
Q Consensus 397 ~----~~~l~~~i~~~l~~-~~~~~~~~a~~~~~ 425 (455)
+ .++++++|.+++++ ....+.++|++.++
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~ 482 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAE 482 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 2 77899999999853 22344455554433
No 112
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.97 E-value=0.079 Score=53.09 Aligned_cols=133 Identities=17% Similarity=0.242 Sum_probs=89.8
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhh---hh---cCCCeeEEeccCHH
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELD---QG---TKERGCIVSWAPQE 336 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~p~~ 336 (455)
+++.+||+||+......++.+..-.+-|...+-.++|....+... .....+. ++ -.++.++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~------~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDA------EINARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcH------HHHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 466799999999999999999888888888999999987542111 1111111 11 12556666666654
Q ss_pred H---Hhhcccccceee---ecCchhHHHHHHhCCceeecCCcchHHH--HHHHhhhhceeeeecCCCCCHHHHHHHHH
Q 044936 337 E---VLAHQAIGGFLT---HSGWNSTLESMVAGVPMICWPQIGDQQV--NSRCVSEIWKIGLDMKDTCDRSTIENLVR 406 (455)
Q Consensus 337 ~---ll~~~~~~~~i~---hgG~~s~~eal~~GvP~l~~P~~~dq~~--na~~~~~~~g~g~~~~~~~~~~~l~~~i~ 406 (455)
. =++.+++ |+. -||+.|+.|+|+.|||+|.++ ++|+- |+..+...+|+-..+. .-..+-+.++|.
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-~s~~dYV~~av~ 573 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-DSRADYVEKAVA 573 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-CCHHHHHHHHHH
Confidence 3 3445555 764 689999999999999999986 88876 6655544456655552 224566666664
No 113
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=95.88 E-value=0.24 Score=48.53 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=51.9
Q ss_pred CCCeeEEecc--CHH---HHhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCC
Q 044936 324 KERGCIVSWA--PQE---EVLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKD 394 (455)
Q Consensus 324 ~~~~~~~~~~--p~~---~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~ 394 (455)
.+++.+.++. ++. .++..+++ |+...- ..++.||+++|+|+|+....+ ....+.+ -..|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC-
Confidence 4567777776 442 47788887 776442 349999999999999965432 1223433 24566553
Q ss_pred CCCHHHHHHHHHHHHhH
Q 044936 395 TCDRSTIENLVRDLMDN 411 (455)
Q Consensus 395 ~~~~~~l~~~i~~~l~~ 411 (455)
+.+++..+|.+++.+
T Consensus 323 --~~~~~a~~i~~ll~~ 337 (372)
T cd03792 323 --TVEEAAVRILYLLRD 337 (372)
T ss_pred --CcHHHHHHHHHHHcC
Confidence 457788899999885
No 114
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=95.82 E-value=0.3 Score=47.48 Aligned_cols=82 Identities=18% Similarity=0.187 Sum_probs=63.1
Q ss_pred CCeeEEeccCHH-HHhhcccc----cceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHH
Q 044936 325 ERGCIVSWAPQE-EVLAHQAI----GGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (455)
Q Consensus 325 ~~~~~~~~~p~~-~ll~~~~~----~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~ 399 (455)
.++.+.+-+--. .+++-+++ |-|+.+||+| ..|++++|+|+|.=|++..|.+-++++.+ .|.++.+++ .+
T Consensus 300 tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~~---~~ 374 (419)
T COG1519 300 TDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVED---AD 374 (419)
T ss_pred CcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEECC---HH
Confidence 467777766554 35555544 2245688886 68999999999999999999999999977 699998843 78
Q ss_pred HHHHHHHHHHhH
Q 044936 400 TIENLVRDLMDN 411 (455)
Q Consensus 400 ~l~~~i~~~l~~ 411 (455)
.+.+++..+++|
T Consensus 375 ~l~~~v~~l~~~ 386 (419)
T COG1519 375 LLAKAVELLLAD 386 (419)
T ss_pred HHHHHHHHhcCC
Confidence 888888877774
No 115
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.70 E-value=0.57 Score=47.93 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=50.3
Q ss_pred cCCCeeEEeccCH-HHHhhcccccceeee---cC-chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 323 TKERGCIVSWAPQ-EEVLAHQAIGGFLTH---SG-WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 323 ~~~~~~~~~~~p~-~~ll~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
+.+++.+.+|..+ ..+|..+++ ||.. -| -+++.|||++|+|+|+.... .+...+.+ -..|..++ .-+
T Consensus 453 L~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~d-G~nG~LVp-~~D 524 (578)
T PRK15490 453 ILERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIE-GVSGFILD-DAQ 524 (578)
T ss_pred CCCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHccc-CCcEEEEC-CCC
Confidence 3477888888655 458889888 8864 34 56999999999999986542 33444544 36777774 224
Q ss_pred HHHHHHHH
Q 044936 398 RSTIENLV 405 (455)
Q Consensus 398 ~~~l~~~i 405 (455)
.+.+.+++
T Consensus 525 ~~aLa~ai 532 (578)
T PRK15490 525 TVNLDQAC 532 (578)
T ss_pred hhhHHHHH
Confidence 45555554
No 116
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.65 E-value=0.68 Score=47.17 Aligned_cols=86 Identities=15% Similarity=0.199 Sum_probs=58.2
Q ss_pred CCCeeEEeccCHHHHhhcccccceeeec----CchhHHHHHHhCCceeecCCcchHHHHHHHhhhh----c-eeeeecCC
Q 044936 324 KERGCIVSWAPQEEVLAHQAIGGFLTHS----GWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEI----W-KIGLDMKD 394 (455)
Q Consensus 324 ~~~~~~~~~~p~~~ll~~~~~~~~i~hg----G~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~----~-g~g~~~~~ 394 (455)
.+|+.+.+...-.+++..+++ +|... --++++||+++|+|+|+-... .....+.+. + ..|..+ .
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv-~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVV-P 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEE-C
Confidence 467877785555778888887 66442 346899999999999995432 223333221 1 267766 3
Q ss_pred CCCHHHHHHHHHHHHhHhHHHHHH
Q 044936 395 TCDRSTIENLVRDLMDNKRDEIME 418 (455)
Q Consensus 395 ~~~~~~l~~~i~~~l~~~~~~~~~ 418 (455)
.-+.+++.++|.+++.| +..++
T Consensus 426 ~~d~~~la~ai~~ll~~--~~~~~ 447 (475)
T cd03813 426 PADPEALARAILRLLKD--PELRR 447 (475)
T ss_pred CCCHHHHHHHHHHHhcC--HHHHH
Confidence 45789999999999986 44443
No 117
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=95.50 E-value=0.032 Score=42.94 Aligned_cols=50 Identities=10% Similarity=0.266 Sum_probs=41.1
Q ss_pred cccccccCCCCcEEEEeecCcccC---CH--HHHHHHHHHHHhCCCcEEEEEeCC
Q 044936 255 CMTWLDSQPSGTVLYVSFGSFIKL---GR--EQILEFWHGMVNSGKRFLWVIRSD 304 (455)
Q Consensus 255 ~~~~l~~~~~~~vv~vs~Gs~~~~---~~--~~~~~~~~~l~~~~~~~iw~~~~~ 304 (455)
+-.||.+.+.++-|+|++||.... .. ..+..++++++..+..+|.++...
T Consensus 30 ~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 30 VPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 446999888899999999998743 22 468889999999999999988643
No 118
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.24 E-value=0.28 Score=49.89 Aligned_cols=130 Identities=13% Similarity=0.103 Sum_probs=73.2
Q ss_pred cEEEEeecCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhh---hhhcCCCeeEEeccCHH---HH
Q 044936 266 TVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVEL---DQGTKERGCIVSWAPQE---EV 338 (455)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~---~l 338 (455)
..+++..|.... ...+.+.+.+..+.+.+.++++.-.++ . ...+.+ .++.+.++.+....+.. .+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-------~-~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~ 362 (473)
T TIGR02095 291 VPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGD-------P-ELEEALRELAERYPGNVRVIIGYDEALAHLI 362 (473)
T ss_pred CCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCC-------H-HHHHHHHHHHHHCCCcEEEEEcCCHHHHHHH
Confidence 346666777763 223334343344434456666543211 0 111111 22344566665544553 47
Q ss_pred hhcccccceeeec---Cc-hhHHHHHHhCCceeecCCcchHHHHHHHhhh-----hceeeeecCCCCCHHHHHHHHHHHH
Q 044936 339 LAHQAIGGFLTHS---GW-NSTLESMVAGVPMICWPQIGDQQVNSRCVSE-----IWKIGLDMKDTCDRSTIENLVRDLM 409 (455)
Q Consensus 339 l~~~~~~~~i~hg---G~-~s~~eal~~GvP~l~~P~~~dq~~na~~~~~-----~~g~g~~~~~~~~~~~l~~~i~~~l 409 (455)
+..+++ ||.-. |. .+.+||+++|+|.|+....+ ....+.+ .-+.|..+ ..-+.+++.++|.+++
T Consensus 363 ~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~-~~~d~~~la~~i~~~l 435 (473)
T TIGR02095 363 YAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLF-EEYDPGALLAALSRAL 435 (473)
T ss_pred HHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEe-CCCCHHHHHHHHHHHH
Confidence 888888 77532 33 37899999999999865422 1112211 01677777 3457899999999988
Q ss_pred h
Q 044936 410 D 410 (455)
Q Consensus 410 ~ 410 (455)
.
T Consensus 436 ~ 436 (473)
T TIGR02095 436 R 436 (473)
T ss_pred H
Confidence 7
No 119
>PHA01633 putative glycosyl transferase group 1
Probab=95.19 E-value=0.22 Score=47.94 Aligned_cols=85 Identities=15% Similarity=0.095 Sum_probs=56.2
Q ss_pred cCCCeeEE---eccCHH---HHhhcccccceeeec---C-chhHHHHHHhCCceeecCC------cchH------HHHHH
Q 044936 323 TKERGCIV---SWAPQE---EVLAHQAIGGFLTHS---G-WNSTLESMVAGVPMICWPQ------IGDQ------QVNSR 380 (455)
Q Consensus 323 ~~~~~~~~---~~~p~~---~ll~~~~~~~~i~hg---G-~~s~~eal~~GvP~l~~P~------~~dq------~~na~ 380 (455)
.++++... +++++. +++..+++ ||.-. | ..+++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 45677776 455654 57888888 88643 4 3478999999999998522 2332 22232
Q ss_pred Hhhh-hceeeeecCCCCCHHHHHHHHHHHHh
Q 044936 381 CVSE-IWKIGLDMKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 381 ~~~~-~~g~g~~~~~~~~~~~l~~~i~~~l~ 410 (455)
...+ .-|.|..+ ...++++++++|.+++.
T Consensus 277 ~~~~~~~g~g~~~-~~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 277 EYYDKEHGQKWKI-HKFQIEDMANAIILAFE 306 (335)
T ss_pred HhcCcccCceeee-cCCCHHHHHHHHHHHHh
Confidence 2222 23566666 45799999999999866
No 120
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.18 E-value=3.2 Score=40.06 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=61.6
Q ss_pred HHhhcccccceeeecCchhHHHHHHhCCceeecCC-cchHHHHHHHhhhhceee-------eec-----CCCCCHHHHHH
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ-IGDQQVNSRCVSEIWKIG-------LDM-----KDTCDRSTIEN 403 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~-~~dq~~na~~~~~~~g~g-------~~~-----~~~~~~~~l~~ 403 (455)
+++..+++ .+.-+|. -++|+..+|+|||+.=- ..=-++-+++...-+=++ ..+ .+.++++.|.+
T Consensus 260 ~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~ 336 (381)
T COG0763 260 KAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLAR 336 (381)
T ss_pred HHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHH
Confidence 47777777 7777774 67899999999998521 111122344443311111 111 14788999999
Q ss_pred HHHHHHhHh--HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 044936 404 LVRDLMDNK--RDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDI 448 (455)
Q Consensus 404 ~i~~~l~~~--~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 448 (455)
++..++.|. ...+++..+++.+. ++.+++++...+.+++.+
T Consensus 337 ~l~~ll~~~~~~~~~~~~~~~l~~~----l~~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 337 ALEELLLNGDRREALKEKFRELHQY----LREDPASEIAAQAVLELL 379 (381)
T ss_pred HHHHHhcChHhHHHHHHHHHHHHHH----HcCCcHHHHHHHHHHHHh
Confidence 999999861 12444444444444 444556666655555543
No 121
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=95.12 E-value=0.044 Score=45.98 Aligned_cols=93 Identities=20% Similarity=0.206 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHHH
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRRL 81 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (455)
..|+++|.++||+|+++++......... ...++.+..++ ++.... . ... . .....+..+
T Consensus 8 ~~l~~~L~~~G~~V~v~~~~~~~~~~~~---------~~~~~~~~~~~--~~~~~~----~-~~~----~-~~~~~~~~~ 66 (160)
T PF13579_consen 8 RELARALAARGHEVTVVTPQPDPEDDEE---------EEDGVRVHRLP--LPRRPW----P-LRL----L-RFLRRLRRL 66 (160)
T ss_dssp HHHHHHHHHTT-EEEEEEE---GGG-SE---------EETTEEEEEE----S-SSS----G-GGH----C-CHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEecCCCCccccc---------ccCCceEEecc--CCccch----h-hhh----H-HHHHHHHHH
Confidence 5799999999999999997554332111 11257777665 111110 0 000 0 012334444
Q ss_pred HhcCCCCCcEEEECCCcc-hhHHHHH-HcCCCeEEE
Q 044936 82 LMTPGRLPTCIISDSIMS-FTIDVAE-ELNIPIITF 115 (455)
Q Consensus 82 l~~~~~~~D~II~D~~~~-~~~~lA~-~lgIP~v~~ 115 (455)
+.....++|+|.+..... ....++. ..++|++..
T Consensus 67 l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~ 102 (160)
T PF13579_consen 67 LAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVT 102 (160)
T ss_dssp CHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE
T ss_pred HhhhccCCeEEEecccchhHHHHHHHHccCCcEEEE
Confidence 422222899998666432 3344555 789999874
No 122
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.03 E-value=0.22 Score=50.34 Aligned_cols=121 Identities=18% Similarity=0.295 Sum_probs=78.6
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhh------hcCCCeeEEeccCHH
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQ------GTKERGCIVSWAPQE 336 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~~ 336 (455)
++.-|||.+|--....+++.++..++-|.+.+..++|..+.+... . ..|.. -.++++.+.+-+.-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~g---e-----~rf~ty~~~~Gl~p~riifs~va~k~ 827 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG---E-----QRFRTYAEQLGLEPDRIIFSPVAAKE 827 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccc---h-----HHHHHHHHHhCCCccceeeccccchH
Confidence 455689999988888999999999999999999999998765322 0 11110 023455544433322
Q ss_pred H-----HhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHH-HHhhhhceeeeecC
Q 044936 337 E-----VLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNS-RCVSEIWKIGLDMK 393 (455)
Q Consensus 337 ~-----ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na-~~~~~~~g~g~~~~ 393 (455)
+ .|..-.+.-+++. |..|.++.|+.|||||.+|.-.--...| -.+.. .|+|..+.
T Consensus 828 eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hlia 888 (966)
T KOG4626|consen 828 EHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIA 888 (966)
T ss_pred HHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHh
Confidence 2 2333333336665 5678999999999999999743333333 34444 68888663
No 123
>PRK14098 glycogen synthase; Provisional
Probab=94.70 E-value=0.53 Score=48.09 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=73.8
Q ss_pred EEEEeecCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChh---hhhhcCCCeeEEeccCHH---HHh
Q 044936 267 VLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVE---LDQGTKERGCIVSWAPQE---EVL 339 (455)
Q Consensus 267 vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~---~ll 339 (455)
.+++..|.... ...+.+.+.+..+...+.+++.. +. |.. ...+. +.++.++++.+.+.++.. .++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~------G~~-~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~ 379 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GS------GDK-EYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI 379 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eC------CCH-HHHHHHHHHHHHCCCCEEEEEecCHHHHHHHH
Confidence 45566676653 22333333333343345666554 32 110 01112 223445778888888774 588
Q ss_pred hcccccceeeecC----chhHHHHHHhCCceeecCCcc--hHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHh
Q 044936 340 AHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIG--DQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 340 ~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~--dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~ 410 (455)
+.+++ |+...= ..+.+||+++|+|.|+....+ |...+ ...+ -+.|..+ ...+.+++.++|.+++.
T Consensus 380 a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~-~~~G~l~-~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 380 AGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSED-KGSGFIF-HDYTPEALVAKLGEALA 450 (489)
T ss_pred HhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCC-CCceeEe-CCCCHHHHHHHHHHHHH
Confidence 88888 775432 137889999999888765422 21111 0112 2567777 34578999999998764
No 124
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.45 E-value=0.42 Score=48.65 Aligned_cols=133 Identities=14% Similarity=0.146 Sum_probs=72.6
Q ss_pred CcEEEEeecCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhh---hhhcCCCeeEEeccCHH---H
Q 044936 265 GTVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVEL---DQGTKERGCIVSWAPQE---E 337 (455)
Q Consensus 265 ~~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~---~ 337 (455)
+..+++..|.+.. ...+.+.+.+..+.+.+.++++.-.++ . ...+.+ .++.++|+.+....++. .
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-------~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 366 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD-------P-EYEEALRELAARYPGRVAVLIGYDEALAHL 366 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC-------H-HHHHHHHHHHHhCCCcEEEEEeCCHHHHHH
Confidence 3446677777663 223334444444444456666543211 0 111111 12234677655333443 4
Q ss_pred Hhhcccccceeee-----cCchhHHHHHHhCCceeecCCc--chHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHh
Q 044936 338 VLAHQAIGGFLTH-----SGWNSTLESMVAGVPMICWPQI--GDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 338 ll~~~~~~~~i~h-----gG~~s~~eal~~GvP~l~~P~~--~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~ 410 (455)
++..+++ ++.. || .+.+||+++|+|+|+.... .|...+.....+ -|.|..++ .-+.+++.+++.+++.
T Consensus 367 ~~~~aDv--~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~-~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 367 IYAGADF--FLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFE-GYNADALLAALRRALA 441 (476)
T ss_pred HHHhCCE--EECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeC-CCCHHHHHHHHHHHHH
Confidence 7788887 7643 33 4789999999999986542 221111111112 25788874 3478999999999886
No 125
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=93.89 E-value=1.9 Score=43.03 Aligned_cols=100 Identities=12% Similarity=0.187 Sum_probs=66.0
Q ss_pred HHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeee-cC-CCCCHHHHHHHHHHHHhHhHH
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLD-MK-DTCDRSTIENLVRDLMDNKRD 414 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~-~~-~~~~~~~l~~~i~~~l~~~~~ 414 (455)
.+++++++ +|..= .-++.-|+..|||.+++++ |+-.... +.+ +|.... ++ +.++.+++.+.+.+++++. +
T Consensus 323 ~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~~K~~~~-~~~-lg~~~~~~~~~~l~~~~Li~~v~~~~~~r-~ 394 (426)
T PRK10017 323 KILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--EHKSAGI-MQQ-LGLPEMAIDIRHLLDGSLQAMVADTLGQL-P 394 (426)
T ss_pred HHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--hHHHHHH-HHH-cCCccEEechhhCCHHHHHHHHHHHHhCH-H
Confidence 67888876 77543 3356778899999999987 4433332 223 676644 44 7889999999999999843 5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHh
Q 044936 415 EIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRS 450 (455)
Q Consensus 415 ~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 450 (455)
.++++.++--+.++.. +.+...++++++.+
T Consensus 395 ~~~~~l~~~v~~~r~~------~~~~~~~~~~~~~~ 424 (426)
T PRK10017 395 ALNARLAEAVSRERQT------GMQMVQSVLERIGE 424 (426)
T ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHhcc
Confidence 6666655555544442 24556677776654
No 126
>PRK00654 glgA glycogen synthase; Provisional
Probab=92.73 E-value=1.8 Score=44.05 Aligned_cols=133 Identities=13% Similarity=0.176 Sum_probs=71.6
Q ss_pred cEEEEeecCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChh---hhhhcCCCeeE-EeccCH--HHH
Q 044936 266 TVLYVSFGSFIK-LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVE---LDQGTKERGCI-VSWAPQ--EEV 338 (455)
Q Consensus 266 ~vv~vs~Gs~~~-~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~p~--~~l 338 (455)
..+++..|.... ...+.+.+.+.-+...+.+++++-.++ . ...+. +.++.+.++.+ .+|-.+ ..+
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~-------~-~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~ 353 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGD-------P-ELEEAFRALAARYPGKVGVQIGYDEALAHRI 353 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCc-------H-HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHH
Confidence 346667777653 222333332222333366776653211 0 01111 22334455543 466322 247
Q ss_pred hhcccccceeeec---Cc-hhHHHHHHhCCceeecCCc--chHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHh
Q 044936 339 LAHQAIGGFLTHS---GW-NSTLESMVAGVPMICWPQI--GDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 339 l~~~~~~~~i~hg---G~-~s~~eal~~GvP~l~~P~~--~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~ 410 (455)
+..+++ ||.-. |+ .+.+||+++|+|.|+.... .|...+...-.+ -+.|..++ .-+.+++.++|.+++.
T Consensus 354 ~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~-~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 354 YAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFD-DFNAEDLLRALRRALE 427 (466)
T ss_pred HhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeC-CCCHHHHHHHHHHHHH
Confidence 888888 77542 33 4889999999999986432 221111100012 26787774 4478999999999886
No 127
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=92.10 E-value=1.8 Score=32.58 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=37.5
Q ss_pred ecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhce-eeeecCCCCCHHHHHHHHHHHHhH
Q 044936 350 HSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWK-IGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 350 hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g-~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
+|-..-+.|++++|+|+|+-.. ......+.+ | .++.. . +.+++.++|..+++|
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-~--~~~el~~~i~~ll~~ 62 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-N--DPEELAEKIEYLLEN 62 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-C--CHHHHHHHHHHHHCC
Confidence 4445589999999999998654 333333322 4 44444 3 899999999999996
No 128
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=91.02 E-value=1.6 Score=37.44 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=51.5
Q ss_pred hCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhh---hhHHHHHHHHhcCC
Q 044936 10 HAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKP---VSKLAFRRLLMTPG 86 (455)
Q Consensus 10 ~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ll~~~~ 86 (455)
++||+|++++....... .++++...+.. +.............++.... .+...+.+|.++ +
T Consensus 1 q~gh~v~fl~~~~~~~~-------------~~GV~~~~y~~--~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~-G 64 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPI-------------PPGVRVVRYRP--PRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQ-G 64 (171)
T ss_pred CCCCEEEEEecCCCCCC-------------CCCcEEEEeCC--CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHc-C
Confidence 47999999995443211 13677777642 11110011111112222222 233444444444 3
Q ss_pred CCCcEEEECCCcchhHHHHHHc-CCCeEEEcc
Q 044936 87 RLPTCIISDSIMSFTIDVAEEL-NIPIITFRP 117 (455)
Q Consensus 87 ~~~D~II~D~~~~~~~~lA~~l-gIP~v~~~~ 117 (455)
-.||+||..+-.-.++-+-+.+ ++|.+.|.-
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 3789999999776778888888 899998643
No 129
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.38 E-value=1.8 Score=41.79 Aligned_cols=134 Identities=17% Similarity=0.233 Sum_probs=84.7
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHH----HhC-CCcEEEEEeCCCCCCCCCCCCCChhhh-hhcC--CCeeEE---ec
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGM----VNS-GKRFLWVIRSDLIDGEPGVGPVPVELD-QGTK--ERGCIV---SW 332 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l----~~~-~~~~iw~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~---~~ 332 (455)
.+..+.|++=-..+.. +.+..+++++ +.. +..+|..+-+.+. ..++. +.+. +|+.+. +|
T Consensus 203 ~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~~---------v~e~~~~~L~~~~~v~li~pl~~ 272 (383)
T COG0381 203 DKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRPR---------VRELVLKRLKNVERVKLIDPLGY 272 (383)
T ss_pred cCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCChh---------hhHHHHHHhCCCCcEEEeCCcch
Confidence 4457888764444433 3344444444 444 4455544322210 11111 2222 356664 67
Q ss_pred cCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHh
Q 044936 333 APQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNK 412 (455)
Q Consensus 333 ~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~ 412 (455)
.+...++.++-+ ++|-.| |-.-||-..|+|.+++=..-+++. ++ + .|.-+.+ ..+.+.|.+++.+++++
T Consensus 273 ~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v-~-agt~~lv--g~~~~~i~~~~~~ll~~- 341 (383)
T COG0381 273 LDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV-E-AGTNILV--GTDEENILDAATELLED- 341 (383)
T ss_pred HHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce-e-cCceEEe--CccHHHHHHHHHHHhhC-
Confidence 788889999877 999988 467789999999999987777776 34 4 3655555 45779999999999997
Q ss_pred HHHHHHH
Q 044936 413 RDEIMES 419 (455)
Q Consensus 413 ~~~~~~~ 419 (455)
+...++
T Consensus 342 -~~~~~~ 347 (383)
T COG0381 342 -EEFYER 347 (383)
T ss_pred -hHHHHH
Confidence 555554
No 130
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=89.43 E-value=3.7 Score=33.54 Aligned_cols=87 Identities=11% Similarity=0.168 Sum_probs=52.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHHH
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRRL 81 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (455)
..+++.|.++||+|+++++........ ...++.+..++-. . .....++ . +. .+..+
T Consensus 14 ~~~~~~L~~~g~~V~ii~~~~~~~~~~----------~~~~i~~~~~~~~-------~-k~~~~~~----~-~~-~l~k~ 69 (139)
T PF13477_consen 14 YNLAKELKKRGYDVHIITPRNDYEKYE----------IIEGIKVIRLPSP-------R-KSPLNYI----K-YF-RLRKI 69 (139)
T ss_pred HHHHHHHHHCCCEEEEEEcCCCchhhh----------HhCCeEEEEecCC-------C-CccHHHH----H-HH-HHHHH
Confidence 578999999999999999854321111 1236777777411 1 1112222 1 12 45666
Q ss_pred HhcCCCCCcEEEECCCcc-h--hHHHHHHcC-CCeEE
Q 044936 82 LMTPGRLPTCIISDSIMS-F--TIDVAEELN-IPIIT 114 (455)
Q Consensus 82 l~~~~~~~D~II~D~~~~-~--~~~lA~~lg-IP~v~ 114 (455)
+++. +||+|.+-.... + +..++...+ +|.+.
T Consensus 70 ik~~--~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~ 104 (139)
T PF13477_consen 70 IKKE--KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIY 104 (139)
T ss_pred hccC--CCCEEEEecCChHHHHHHHHHHHcCCCCEEE
Confidence 6666 899998666543 2 233456678 88885
No 131
>PLN02316 synthase/transferase
Probab=89.43 E-value=11 Score=41.78 Aligned_cols=105 Identities=11% Similarity=0.114 Sum_probs=63.4
Q ss_pred CCCeeEEeccCHH---HHhhcccccceeee-----cCchhHHHHHHhCCceeecCCc--chHHHHHH------Hhhhhce
Q 044936 324 KERGCIVSWAPQE---EVLAHQAIGGFLTH-----SGWNSTLESMVAGVPMICWPQI--GDQQVNSR------CVSEIWK 387 (455)
Q Consensus 324 ~~~~~~~~~~p~~---~ll~~~~~~~~i~h-----gG~~s~~eal~~GvP~l~~P~~--~dq~~na~------~~~~~~g 387 (455)
++++.+....+.. .+++.+++ |+.. || .+.+|||++|+|.|+.... .|...... .....-+
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~G-LvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~ 975 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCG-LTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEP 975 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCcc-HHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCC
Confidence 4566665444553 58888888 8854 34 5899999999988875432 22221110 0000014
Q ss_pred eeeecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCC
Q 044936 388 IGLDMKDTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGS 436 (455)
Q Consensus 388 ~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~ 436 (455)
.|..+ ...+++.|..+|.++|.+ |......+++..++.+...=|
T Consensus 976 tGflf-~~~d~~aLa~AL~raL~~----~~~~~~~~~~~~r~~m~~dFS 1019 (1036)
T PLN02316 976 NGFSF-DGADAAGVDYALNRAISA----WYDGRDWFNSLCKRVMEQDWS 1019 (1036)
T ss_pred ceEEe-CCCCHHHHHHHHHHHHhh----hhhhHHHHHHHHHHHHHhhCC
Confidence 67777 445889999999999874 334444456666665544433
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=89.37 E-value=17 Score=36.09 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=64.8
Q ss_pred EEEeecCcccCCHHHHHHHHHHHHhCCCcE-EEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEecc-CH---HHHhhcc
Q 044936 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRF-LWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWA-PQ---EEVLAHQ 342 (455)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~---~~ll~~~ 342 (455)
+++..|............+++|+...+..+ ++.++.. . +. ...++...++. ++ ..++..+
T Consensus 243 ~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g------~----~~-----~~~~v~~~g~~~~~~~l~~~y~~a 307 (405)
T PRK10125 243 KIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKF------S----PF-----TAGNVVNHGFETDKRKLMSALNQM 307 (405)
T ss_pred EEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCC------C----cc-----cccceEEecCcCCHHHHHHHHHhC
Confidence 344445433222233566888887765433 3444321 0 10 12345545554 33 3466677
Q ss_pred cccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHH
Q 044936 343 AIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVR 406 (455)
Q Consensus 343 ~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~ 406 (455)
++ ||.-.= -++++|||++|+|+|+....+ - ...+ +. +.|..++ .-+.+++++.+.
T Consensus 308 Dv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG-~---~Eiv-~~-~~G~lv~-~~d~~~La~~~~ 366 (405)
T PRK10125 308 DA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA-A---REVL-QK-SGGKTVS-EEEVLQLAQLSK 366 (405)
T ss_pred CE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC-h---HHhE-eC-CcEEEEC-CCCHHHHHhccC
Confidence 77 776432 458999999999999987654 2 2223 32 5687774 336777776543
No 133
>PLN02939 transferase, transferring glycosyl groups
Probab=88.08 E-value=15 Score=40.38 Aligned_cols=83 Identities=13% Similarity=0.184 Sum_probs=54.3
Q ss_pred CCCeeEEeccCHH---HHhhcccccceeee-----cCchhHHHHHHhCCceeecCCcc--hHHHH--HHHhhhhceeeee
Q 044936 324 KERGCIVSWAPQE---EVLAHQAIGGFLTH-----SGWNSTLESMVAGVPMICWPQIG--DQQVN--SRCVSEIWKIGLD 391 (455)
Q Consensus 324 ~~~~~~~~~~p~~---~ll~~~~~~~~i~h-----gG~~s~~eal~~GvP~l~~P~~~--dq~~n--a~~~~~~~g~g~~ 391 (455)
.+++....+.+.. .+++.+++ ||.. || .+.+|||++|+|.|+....+ |...+ ...+.+.-+.|..
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfG-LvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfL 912 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCG-LTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFT 912 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCc-HHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEE
Confidence 3567777777764 58888888 8864 34 48999999999998865532 22111 1111111256766
Q ss_pred cCCCCCHHHHHHHHHHHHh
Q 044936 392 MKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 392 ~~~~~~~~~l~~~i~~~l~ 410 (455)
+. ..+.+++.++|.+++.
T Consensus 913 f~-~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 913 FL-TPDEQGLNSALERAFN 930 (977)
T ss_pred ec-CCCHHHHHHHHHHHHH
Confidence 63 3588899999988875
No 134
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.66 E-value=6.5 Score=39.78 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=65.8
Q ss_pred eccCHHH---Hhhcccccceeee---cCch-hHHHHHHhCCc----eeecCCcchHHHHHHHhhhhceeeeecCCCCCHH
Q 044936 331 SWAPQEE---VLAHQAIGGFLTH---SGWN-STLESMVAGVP----MICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS 399 (455)
Q Consensus 331 ~~~p~~~---ll~~~~~~~~i~h---gG~~-s~~eal~~GvP----~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~ 399 (455)
+.+++.+ ++..+++ |+.- =|+| ++.||+++|+| +|+--..+-. ..+ +-|+.+ ...+.+
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l----~~gllV-nP~d~~ 410 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL----NGALLV-NPYDID 410 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh----CCcEEE-CCCCHH
Confidence 4566755 5778887 7753 3644 77899999999 6654433221 112 235555 455889
Q ss_pred HHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 044936 400 TIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIR 449 (455)
Q Consensus 400 ~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~ 449 (455)
+++++|.++|+...+..+++.+++++.+.. -+...=.+++++.|.
T Consensus 411 ~lA~aI~~aL~~~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 411 GMADAIARALTMPLEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 999999999983224555566666665443 255556677777664
No 135
>PLN02501 digalactosyldiacylglycerol synthase
Probab=87.08 E-value=11 Score=39.74 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=50.3
Q ss_pred eeEEeccCHH-HHhhcccccceeeecC----chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHH
Q 044936 327 GCIVSWAPQE-EVLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTI 401 (455)
Q Consensus 327 ~~~~~~~p~~-~ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l 401 (455)
+...++.++. +++..+++ ||.-+= -++++|||++|+|+|+.-.-+... +.+ -+.|... -+.+++
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGll~---~D~Eaf 671 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCLTY---KTSEDF 671 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeEec---CCHHHH
Confidence 4555777765 58988888 876432 468999999999999976543211 212 1233322 368999
Q ss_pred HHHHHHHHhH
Q 044936 402 ENLVRDLMDN 411 (455)
Q Consensus 402 ~~~i~~~l~~ 411 (455)
.++|.++|.+
T Consensus 672 AeAI~~LLsd 681 (794)
T PLN02501 672 VAKVKEALAN 681 (794)
T ss_pred HHHHHHHHhC
Confidence 9999999985
No 136
>PHA01630 putative group 1 glycosyl transferase
Probab=87.00 E-value=9.6 Score=36.72 Aligned_cols=77 Identities=10% Similarity=0.158 Sum_probs=45.3
Q ss_pred eccCHHH---Hhhcccccceee--e-cC-chhHHHHHHhCCceeecCCcc--hHHH---HHHHhhh----------hcee
Q 044936 331 SWAPQEE---VLAHQAIGGFLT--H-SG-WNSTLESMVAGVPMICWPQIG--DQQV---NSRCVSE----------IWKI 388 (455)
Q Consensus 331 ~~~p~~~---ll~~~~~~~~i~--h-gG-~~s~~eal~~GvP~l~~P~~~--dq~~---na~~~~~----------~~g~ 388 (455)
.++|+.+ ++..+++ |+. + .| ..++.|||++|+|+|+.-..+ |... |+..+.. ..++
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~ 273 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHV 273 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccc
Confidence 3466544 6888888 663 2 22 458999999999999975432 3221 1111100 0124
Q ss_pred eeecCCCCCHHHHHHHHHHHHhH
Q 044936 389 GLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 389 g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
|..+. .+.+++.+++.++|.+
T Consensus 274 G~~v~--~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 274 GYFLD--PDIEDAYQKLLEALAN 294 (331)
T ss_pred ccccC--CCHHHHHHHHHHHHhC
Confidence 44442 2567777778787774
No 137
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=84.94 E-value=4.5 Score=38.55 Aligned_cols=59 Identities=17% Similarity=0.130 Sum_probs=42.2
Q ss_pred cCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHH---HHHhhhhceeeeecC
Q 044936 333 APQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVN---SRCVSEIWKIGLDMK 393 (455)
Q Consensus 333 ~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~n---a~~~~~~~g~g~~~~ 393 (455)
=|+..+|+.++. .|||---.+.+.||+..|+|+.++|+-.-.... ...+.+ .|.-..+.
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~ 281 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFT 281 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECC
Confidence 377889998876 577777789999999999999999986521112 234544 47666664
No 138
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.36 E-value=3.6 Score=38.29 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=57.9
Q ss_pred CCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHH--HHHHhhhhceeeeecCCCCCHHHH
Q 044936 325 ERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQV--NSRCVSEIWKIGLDMKDTCDRSTI 401 (455)
Q Consensus 325 ~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~--na~~~~~~~g~g~~~~~~~~~~~l 401 (455)
+|..+. .|-...++|.++++ .|--.|. .+-+++-.|+|+|.+|-.+-|+. .|.+-..-+|+.+.+-+ ..++.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~--~~aq~ 368 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR--PEAQA 368 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC--Cchhh
Confidence 455443 66666778888776 5555542 34456778999999999999965 55554444688877742 22333
Q ss_pred HHH-HHHHHhHhHHHHHHHHH
Q 044936 402 ENL-VRDLMDNKRDEIMESTV 421 (455)
Q Consensus 402 ~~~-i~~~l~~~~~~~~~~a~ 421 (455)
... +++++.| +.+.++++
T Consensus 369 a~~~~q~ll~d--p~r~~air 387 (412)
T COG4370 369 AAQAVQELLGD--PQRLTAIR 387 (412)
T ss_pred HHHHHHHHhcC--hHHHHHHH
Confidence 333 3448887 77766655
No 139
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=81.76 E-value=6.9 Score=39.68 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=59.1
Q ss_pred EeccCHHH---Hhhcccccceee---ecCch-hHHHHHHhCCc----eeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 330 VSWAPQEE---VLAHQAIGGFLT---HSGWN-STLESMVAGVP----MICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 330 ~~~~p~~~---ll~~~~~~~~i~---hgG~~-s~~eal~~GvP----~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
.+++++.+ ++..+++ ||. +-|+| ++.||+++|+| +|+--..+-.. . ...|..+ ...+.
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~-----~---~~~g~lv-~p~d~ 414 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE-----E---LSGALLV-NPYDI 414 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchh-----h---cCCCEEE-CCCCH
Confidence 36777765 6788887 774 34544 67899999999 54432211100 0 1234555 44578
Q ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 044936 399 STIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDI 448 (455)
Q Consensus 399 ~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 448 (455)
++++++|.+++++..+..++..++.++.+.+ -+...-.++++++|
T Consensus 415 ~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~-----~~~~~w~~~~l~~l 459 (460)
T cd03788 415 DEVADAIHRALTMPLEERRERHRKLREYVRT-----HDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHhh
Confidence 9999999999984213333333334433332 24444455666554
No 140
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=81.57 E-value=8 Score=33.99 Aligned_cols=49 Identities=27% Similarity=0.264 Sum_probs=36.4
Q ss_pred cCCCeeEEeccCH-H--H-HhhcccccceeeecC----chhHHHHHHhCCceeecCCcc
Q 044936 323 TKERGCIVSWAPQ-E--E-VLAHQAIGGFLTHSG----WNSTLESMVAGVPMICWPQIG 373 (455)
Q Consensus 323 ~~~~~~~~~~~p~-~--~-ll~~~~~~~~i~hgG----~~s~~eal~~GvP~l~~P~~~ 373 (455)
...|+.+.++++. . . ++..+++ +|+... .+++.||+.+|+|+|+.+..+
T Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 159 LLDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CcccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 4578888888633 2 2 4444777 887776 689999999999999977643
No 141
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=80.43 E-value=7.8 Score=39.86 Aligned_cols=74 Identities=22% Similarity=0.292 Sum_probs=53.6
Q ss_pred CCeeEEeccC--H-HHHhhcccccceeeec---CchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCH
Q 044936 325 ERGCIVSWAP--Q-EEVLAHQAIGGFLTHS---GWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDR 398 (455)
Q Consensus 325 ~~~~~~~~~p--~-~~ll~~~~~~~~i~hg---G~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~ 398 (455)
.++.+.++.+ + ...+.+.++ +|.=+ |.++.+||+.||+|+| .......|.+ -.-|..+ -+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li---~d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYII---DDI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEe---CCH
Confidence 4666778877 4 357777776 88766 7789999999999999 2222334544 3556665 367
Q ss_pred HHHHHHHHHHHhH
Q 044936 399 STIENLVRDLMDN 411 (455)
Q Consensus 399 ~~l~~~i~~~l~~ 411 (455)
+++.++|...|.+
T Consensus 476 ~~l~~al~~~L~~ 488 (519)
T TIGR03713 476 SELLKALDYYLDN 488 (519)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999985
No 142
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=73.92 E-value=12 Score=34.82 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=33.8
Q ss_pred eeEEeccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCC
Q 044936 327 GCIVSWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQ 371 (455)
Q Consensus 327 ~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~ 371 (455)
+.+.+-.+-.+++.+++. +||-.+ ..-+||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 334466788899999887 888776 478999999999999764
No 143
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=73.09 E-value=29 Score=26.02 Aligned_cols=27 Identities=19% Similarity=0.276 Sum_probs=19.3
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcC
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLG 29 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~ 29 (455)
++.+++.|.+.|+++ ++|. ...+.+.+
T Consensus 2 ~~~~~~~l~~lG~~i-~AT~-gTa~~L~~ 28 (90)
T smart00851 2 LVELAKRLAELGFEL-VATG-GTAKFLRE 28 (90)
T ss_pred HHHHHHHHHHCCCEE-EEcc-HHHHHHHH
Confidence 478999999999998 3443 44555544
No 144
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=72.82 E-value=23 Score=35.96 Aligned_cols=19 Identities=16% Similarity=0.336 Sum_probs=17.4
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 044936 3 TLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~ 21 (455)
.|+++|+++||+|+++++.
T Consensus 24 ~L~~aL~~~G~~V~Vi~p~ 42 (476)
T cd03791 24 ALPKALAKLGHDVRVIMPK 42 (476)
T ss_pred HHHHHHHHCCCeEEEEecC
Confidence 6899999999999999974
No 145
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=71.95 E-value=15 Score=35.07 Aligned_cols=137 Identities=8% Similarity=0.059 Sum_probs=76.4
Q ss_pred ccccCCCCcEEEEeecC-cc--cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEe--c
Q 044936 258 WLDSQPSGTVLYVSFGS-FI--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVS--W 332 (455)
Q Consensus 258 ~l~~~~~~~vv~vs~Gs-~~--~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 332 (455)
++....+++.|.+..|+ .. .++.+.+.++++.+.+.+.++++..+++... ...+.+.+..+. ..+.+ -
T Consensus 172 ~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~------~~~~~i~~~~~~-~~l~g~~s 244 (319)
T TIGR02193 172 FLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEK------QRAERIAEALPG-AVVLPKMS 244 (319)
T ss_pred hhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH------HHHHHHHhhCCC-CeecCCCC
Confidence 44332344556566664 33 4788999999999987677777654322100 011122222222 22333 2
Q ss_pred cCH-HHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeee-ec---C-CCCCHHHHHHHHH
Q 044936 333 APQ-EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGL-DM---K-DTCDRSTIENLVR 406 (455)
Q Consensus 333 ~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~-~~---~-~~~~~~~l~~~i~ 406 (455)
+++ ..+++++++ ||+.-. |.++=|.+.|+|.|++ ++- .+..+..= +|-.. .+ . +.++.+++.+++.
T Consensus 245 L~el~ali~~a~l--~I~~DS-gp~HlAaa~g~P~i~l--fg~--t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~ 316 (319)
T TIGR02193 245 LAEVAALLAGADA--VVGVDT-GLTHLAAALDKPTVTL--YGA--TDPGRTGG-YGKPNVALLGESGANPTPDEVLAALE 316 (319)
T ss_pred HHHHHHHHHcCCE--EEeCCC-hHHHHHHHcCCCEEEE--ECC--CCHhhccc-CCCCceEEccCccCCCCHHHHHHHHH
Confidence 445 458889887 998765 6777778899999985 111 11111100 12111 11 1 6789999999998
Q ss_pred HHH
Q 044936 407 DLM 409 (455)
Q Consensus 407 ~~l 409 (455)
++|
T Consensus 317 ~~~ 319 (319)
T TIGR02193 317 ELL 319 (319)
T ss_pred hhC
Confidence 764
No 146
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=70.74 E-value=11 Score=37.97 Aligned_cols=136 Identities=10% Similarity=0.093 Sum_probs=82.6
Q ss_pred CCCcEEEEeecCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCCCCCCCCCCChhhh--hhcCCCeeEE-eccC-H-H
Q 044936 263 PSGTVLYVSFGSFIKLGREQILEFWHGMVNSG-KRFLWVIRSDLIDGEPGVGPVPVELD--QGTKERGCIV-SWAP-Q-E 336 (455)
Q Consensus 263 ~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~p-~-~ 336 (455)
.+..+++++ +.++++.+.....+.+ ..|=...... ..+.+. ++. +|+.+. ++.+ + .
T Consensus 281 ~~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te----------~s~kL~~L~~y-~nvvly~~~~~~~l~ 342 (438)
T TIGR02919 281 YRKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE----------MSSKLMSLDKY-DNVKLYPNITTQKIQ 342 (438)
T ss_pred CcccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc----------ccHHHHHHHhc-CCcEEECCcChHHHH
Confidence 344567666 3566666666666653 4554333211 112221 233 676665 7777 4 4
Q ss_pred HHhhcccccceeeecC--chhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHH
Q 044936 337 EVLAHQAIGGFLTHSG--WNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRD 414 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG--~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~ 414 (455)
+++..|++=+-|+|+. ..++.||+.+|+|+++.=.... +...+.+ |..+ ..-+.+++.++|.++|.+ +
T Consensus 343 ~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~----g~l~-~~~~~~~m~~~i~~lL~d--~ 412 (438)
T TIGR02919 343 ELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS----ENIF-EHNEVDQLISKLKDLLND--P 412 (438)
T ss_pred HHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---CcccccC----Ccee-cCCCHHHHHHHHHHHhcC--H
Confidence 6999999977788876 6799999999999998643211 1122211 3333 234679999999999986 4
Q ss_pred -HHHHHHHHHHHH
Q 044936 415 -EIMESTVKIAKM 426 (455)
Q Consensus 415 -~~~~~a~~~~~~ 426 (455)
.++++..+-++.
T Consensus 413 ~~~~~~~~~q~~~ 425 (438)
T TIGR02919 413 NQFRELLEQQREH 425 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 455554444433
No 147
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=70.72 E-value=4.7 Score=33.98 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
..|+++|+++||+||++++..
T Consensus 19 ~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 19 LNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp HHHHHHHHHTT-EEEEEESS-
T ss_pred HHHHHHHHHCCCEEEEEEcCC
Confidence 579999999999999998754
No 148
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=70.61 E-value=90 Score=28.87 Aligned_cols=79 Identities=23% Similarity=0.401 Sum_probs=50.8
Q ss_pred CCeeEEeccCH---HHHhhcccccceeee---cCchh-HHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 325 ERGCIVSWAPQ---EEVLAHQAIGGFLTH---SGWNS-TLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 325 ~~~~~~~~~p~---~~ll~~~~~~~~i~h---gG~~s-~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
.++...+++++ ..++..+++ ++.. .|.|. +.||+++|+|++..... .....+.+ -+.|. +.....
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~-~~~g~-~~~~~~ 328 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVED-GETGL-LVPPGD 328 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcC-CCceE-ecCCCC
Confidence 56777888883 346766666 6666 35544 59999999999875542 22222322 12355 322226
Q ss_pred HHHHHHHHHHHHhH
Q 044936 398 RSTIENLVRDLMDN 411 (455)
Q Consensus 398 ~~~l~~~i~~~l~~ 411 (455)
.+++..++..++++
T Consensus 329 ~~~~~~~i~~~~~~ 342 (381)
T COG0438 329 VEELADALEQLLED 342 (381)
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999886
No 149
>PRK00654 glgA glycogen synthase; Provisional
Probab=69.89 E-value=42 Score=34.02 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=17.5
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 044936 3 TLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~ 21 (455)
.|+++|+++||+|+++++.
T Consensus 25 ~L~~~L~~~G~~V~v~~p~ 43 (466)
T PRK00654 25 ALPKALAALGHDVRVLLPG 43 (466)
T ss_pred HHHHHHHHCCCcEEEEecC
Confidence 6899999999999999974
No 150
>PRK14099 glycogen synthase; Provisional
Probab=69.70 E-value=62 Score=33.07 Aligned_cols=82 Identities=10% Similarity=0.080 Sum_probs=44.8
Q ss_pred CCCe-eEEeccCHH-HHh-hcccccceeee---cC-chhHHHHHHhCCceeecCCc--chHHHHHHHhhh--hceeeeec
Q 044936 324 KERG-CIVSWAPQE-EVL-AHQAIGGFLTH---SG-WNSTLESMVAGVPMICWPQI--GDQQVNSRCVSE--IWKIGLDM 392 (455)
Q Consensus 324 ~~~~-~~~~~~p~~-~ll-~~~~~~~~i~h---gG-~~s~~eal~~GvP~l~~P~~--~dq~~na~~~~~--~~g~g~~~ 392 (455)
++++ ...+|-.+. .++ +.+++ ||.. =| ..+.+|||++|+|.|+.... .|-..+.....+ .-+.|..+
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 4454 355763332 233 44666 7753 23 34778999999766665431 122111110001 01467777
Q ss_pred CCCCCHHHHHHHHHHH
Q 044936 393 KDTCDRSTIENLVRDL 408 (455)
Q Consensus 393 ~~~~~~~~l~~~i~~~ 408 (455)
+ .-+.+++.++|.++
T Consensus 427 ~-~~d~~~La~ai~~a 441 (485)
T PRK14099 427 S-PVTADALAAALRKT 441 (485)
T ss_pred C-CCCHHHHHHHHHHH
Confidence 4 44789999999874
No 151
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=69.45 E-value=16 Score=37.79 Aligned_cols=74 Identities=12% Similarity=0.129 Sum_probs=43.1
Q ss_pred CHHHHhhcccccceee---ecCch-hHHHHHHhCCceeecCCc-chHHHHHHHhhhhceeeeecC-C-----CCCHHHHH
Q 044936 334 PQEEVLAHQAIGGFLT---HSGWN-STLESMVAGVPMICWPQI-GDQQVNSRCVSEIWKIGLDMK-D-----TCDRSTIE 402 (455)
Q Consensus 334 p~~~ll~~~~~~~~i~---hgG~~-s~~eal~~GvP~l~~P~~-~dq~~na~~~~~~~g~g~~~~-~-----~~~~~~l~ 402 (455)
+..+++..+++ ||. +=||| +++||+++|+|+|+-... ...... ..+.+....|+.+. . .-+.++|+
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHH
Confidence 45677777888 555 34544 899999999999997652 111111 12211112466553 1 12446667
Q ss_pred HHHHHHHh
Q 044936 403 NLVRDLMD 410 (455)
Q Consensus 403 ~~i~~~l~ 410 (455)
+++.+++.
T Consensus 544 ~~m~~~~~ 551 (590)
T cd03793 544 QYMYEFCQ 551 (590)
T ss_pred HHHHHHhC
Confidence 77776664
No 152
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=67.65 E-value=35 Score=31.47 Aligned_cols=21 Identities=14% Similarity=0.151 Sum_probs=17.7
Q ss_pred HHHHHHHhCCCEEEEEeCCcc
Q 044936 3 TLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
.|++.|.++||+|+..+....
T Consensus 14 ~la~~L~~~g~~v~~s~~t~~ 34 (256)
T TIGR00715 14 AIAKGLIAQGIEILVTVTTSE 34 (256)
T ss_pred HHHHHHHhCCCeEEEEEccCC
Confidence 688999999999998887554
No 153
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=67.24 E-value=19 Score=33.54 Aligned_cols=95 Identities=13% Similarity=0.153 Sum_probs=57.9
Q ss_pred CcEEEEeecCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhc-CCCee-EEec--cCH-H
Q 044936 265 GTVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGT-KERGC-IVSW--APQ-E 336 (455)
Q Consensus 265 ~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~p~-~ 336 (455)
++.|.+..|+.. .++.+.+.++++-+.+.+.++++..+++.. ..-+.+.+.. ..++. +.+- +.+ .
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~-------~~~~~i~~~~~~~~~~~~~~~~~l~e~~ 193 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAER-------ELAEEIAAALGGPRVVNLAGKTSLRELA 193 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhH-------HHHHHHHHhcCCCccccCcCCCCHHHHH
Confidence 445666666653 468889999999998878888765432100 0111111112 12222 2222 233 4
Q ss_pred HHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
.++.++++ +|+.-. |.+.=|.+.|+|++++
T Consensus 194 ~li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 194 ALLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 58888887 999865 5666677999999885
No 154
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=67.17 E-value=40 Score=31.05 Aligned_cols=22 Identities=41% Similarity=0.377 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
..|++.|.+ +|+|+++.|....
T Consensus 17 ~aL~~~l~~-~~~V~VvAP~~~~ 38 (253)
T PRK13933 17 NTLAELLSK-YHEVIIVAPENQR 38 (253)
T ss_pred HHHHHHHHh-CCcEEEEccCCCC
Confidence 578888865 6899999886643
No 155
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=66.71 E-value=5.9 Score=30.21 Aligned_cols=84 Identities=18% Similarity=0.193 Sum_probs=46.5
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
++++|++|.+.||++ +.|+...+.+.+. +++...+-+....+.. ..... .+.+
T Consensus 2 ~~~~a~~l~~lG~~i--~AT~gTa~~L~~~-----------Gi~~~~v~~~~~~~~~-~~g~~-------------~i~~ 54 (95)
T PF02142_consen 2 IVPLAKRLAELGFEI--YATEGTAKFLKEH-----------GIEVTEVVNKIGEGES-PDGRV-------------QIMD 54 (95)
T ss_dssp HHHHHHHHHHTTSEE--EEEHHHHHHHHHT-----------T--EEECCEEHSTG-G-GTHCH-------------HHHH
T ss_pred HHHHHHHHHHCCCEE--EEChHHHHHHHHc-----------CCCceeeeeecccCcc-CCchh-------------HHHH
Confidence 478999999999654 5555666666654 5665554321111100 00010 4556
Q ss_pred HHhcCCCCCcEEEECCCcch------h---HHHHHHcCCCeE
Q 044936 81 LLMTPGRLPTCIISDSIMSF------T---IDVAEELNIPII 113 (455)
Q Consensus 81 ll~~~~~~~D~II~D~~~~~------~---~~lA~~lgIP~v 113 (455)
+++.. ++|+||..+.-.- + ..+|..++||++
T Consensus 55 ~i~~~--~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 55 LIKNG--KIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHTT--SEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEE
T ss_pred HHHcC--CeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCc
Confidence 66655 8999997664321 1 346778899875
No 156
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=64.36 E-value=12 Score=36.59 Aligned_cols=104 Identities=15% Similarity=0.174 Sum_probs=61.3
Q ss_pred CCCeeEE-eccCHHHHhhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC------CCC
Q 044936 324 KERGCIV-SWAPQEEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK------DTC 396 (455)
Q Consensus 324 ~~~~~~~-~~~p~~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~------~~~ 396 (455)
.+++..+ +..+-.++|..+++ .||--. +.+.|.+..+.|++....-.|.+.+. .|.-.... ..-
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~------rg~~~~~~~~~pg~~~~ 321 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKE------RGFYFDYEEDLPGPIVY 321 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT------SSBSS-TTTSSSS-EES
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhc------cCCCCchHhhCCCceeC
Confidence 3566655 45567899999998 999985 58899999999999877656555222 13322221 134
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChH
Q 044936 397 DRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSY 438 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~ 438 (455)
+.++|.++|..++.+. ..++++-++..+.+-.. ..|.++.
T Consensus 322 ~~~eL~~~i~~~~~~~-~~~~~~~~~~~~~~~~~-~Dg~s~e 361 (369)
T PF04464_consen 322 NFEELIEAIENIIENP-DEYKEKREKFRDKFFKY-NDGNSSE 361 (369)
T ss_dssp SHHHHHHHHTTHHHHH-HHTHHHHHHHHHHHSTT---S-HHH
T ss_pred CHHHHHHHHHhhhhCC-HHHHHHHHHHHHHhCCC-CCchHHH
Confidence 6799999999988741 45566666666665442 3354443
No 157
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=64.01 E-value=47 Score=30.39 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
..|+++|.+.| +|+++.|....
T Consensus 17 ~aL~~~l~~~g-~V~VvAP~~~~ 38 (244)
T TIGR00087 17 RALYQALKELG-EVTVVAPARQR 38 (244)
T ss_pred HHHHHHHHhCC-CEEEEeCCCCc
Confidence 57899999998 89999886653
No 158
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=62.81 E-value=41 Score=29.50 Aligned_cols=32 Identities=31% Similarity=0.430 Sum_probs=24.6
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccc
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~ 119 (455)
.||+|| .|+... .+..=|.++|||.+.+.-+.
T Consensus 127 ~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 127 LPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 799876 777554 66777889999999976554
No 159
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=61.78 E-value=1.4e+02 Score=28.36 Aligned_cols=80 Identities=19% Similarity=0.192 Sum_probs=58.2
Q ss_pred CCeeEE-eccCH---HHHhhcccccceeee--cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-CCCC
Q 044936 325 ERGCIV-SWAPQ---EEVLAHQAIGGFLTH--SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCD 397 (455)
Q Consensus 325 ~~~~~~-~~~p~---~~ll~~~~~~~~i~h--gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~-~~~~ 397 (455)
+|+.+. +++|- ..+|+.++++-|+++ =|.|++.-.+..|+|+++- .+-+.+.... + .|+-+..+ +.++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e-~gv~Vlf~~d~L~ 280 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-E-QGLPVLFTGDDLD 280 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-h-CCCeEEecCCccc
Confidence 677765 77775 569999999888876 4899999999999999885 3334444433 4 47777655 7788
Q ss_pred HHHHHHHHHHHH
Q 044936 398 RSTIENLVRDLM 409 (455)
Q Consensus 398 ~~~l~~~i~~~l 409 (455)
...+.++=+++.
T Consensus 281 ~~~v~e~~rql~ 292 (322)
T PRK02797 281 EDIVREAQRQLA 292 (322)
T ss_pred HHHHHHHHHHHH
Confidence 888777655443
No 160
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=61.31 E-value=36 Score=29.65 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=20.2
Q ss_pred CCcEEEECCCcchhH---HHHHHcCCCeEEEc
Q 044936 88 LPTCIISDSIMSFTI---DVAEELNIPIITFR 116 (455)
Q Consensus 88 ~~D~II~D~~~~~~~---~lA~~lgIP~v~~~ 116 (455)
++|+|++........ ......++|++...
T Consensus 51 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 82 (229)
T cd01635 51 KPDVVHAHGYYPAPLALLLAARLLGIPLVLTV 82 (229)
T ss_pred CCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEE
Confidence 899998777554332 35677899988743
No 161
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=60.43 E-value=41 Score=36.75 Aligned_cols=101 Identities=9% Similarity=0.175 Sum_probs=59.0
Q ss_pred ccCHH---HHhhcccccceeeec---Cch-hHHHHHHhCCc---eeecCCcchHHHHHHHhhhhce-eeeecCCCCCHHH
Q 044936 332 WAPQE---EVLAHQAIGGFLTHS---GWN-STLESMVAGVP---MICWPQIGDQQVNSRCVSEIWK-IGLDMKDTCDRST 400 (455)
Q Consensus 332 ~~p~~---~ll~~~~~~~~i~hg---G~~-s~~eal~~GvP---~l~~P~~~dq~~na~~~~~~~g-~g~~~~~~~~~~~ 400 (455)
++|.. .++..+++ |+.-. |+| ++.|++++|+| ++++.-++- .+.. +| .|+.+ .-.+.++
T Consensus 363 ~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~----l~~~allV-nP~D~~~ 432 (797)
T PLN03063 363 SVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS----LGAGALLV-NPWNITE 432 (797)
T ss_pred CCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhh----hcCCeEEE-CCCCHHH
Confidence 45553 47778888 77543 776 67799999999 444432211 1111 23 45666 4568899
Q ss_pred HHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 044936 401 IENLVRDLMD-NKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDI 448 (455)
Q Consensus 401 l~~~i~~~l~-~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 448 (455)
++++|.++|+ +. +..+++.+++.+.++.. +...-.+.|++.+
T Consensus 433 lA~AI~~aL~m~~-~er~~r~~~~~~~v~~~-----~~~~Wa~~fl~~l 475 (797)
T PLN03063 433 VSSAIKEALNMSD-EERETRHRHNFQYVKTH-----SAQKWADDFMSEL 475 (797)
T ss_pred HHHHHHHHHhCCH-HHHHHHHHHHHHhhhhC-----CHHHHHHHHHHHH
Confidence 9999999998 31 33444444444444332 3334444555544
No 162
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=59.57 E-value=61 Score=29.70 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
..|++.|. .+++||++.|..+.
T Consensus 17 ~aL~~al~-~~~dV~VVAP~~~q 38 (252)
T COG0496 17 RALARALR-EGADVTVVAPDREQ 38 (252)
T ss_pred HHHHHHHh-hCCCEEEEccCCCC
Confidence 46888888 99999999997653
No 163
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=58.08 E-value=70 Score=29.45 Aligned_cols=21 Identities=29% Similarity=0.350 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
.+|++.|.+ +|+|+++.|...
T Consensus 17 ~aL~~~l~~-~~~V~VvAP~~~ 37 (253)
T PRK13935 17 IILAEYLSE-KHEVFVVAPDKE 37 (253)
T ss_pred HHHHHHHHh-CCcEEEEccCCC
Confidence 468888865 689999988664
No 164
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=56.42 E-value=32 Score=35.68 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=52.2
Q ss_pred cCHHHHhhcccccceeeecC-c-hhHHHHHHhCCceeecCCc-chHHHHHH--HhhhhceeeeecCCCCCHHHHHHHHHH
Q 044936 333 APQEEVLAHQAIGGFLTHSG-W-NSTLESMVAGVPMICWPQI-GDQQVNSR--CVSEIWKIGLDMKDTCDRSTIENLVRD 407 (455)
Q Consensus 333 ~p~~~ll~~~~~~~~i~hgG-~-~s~~eal~~GvP~l~~P~~-~dq~~na~--~~~~~~g~g~~~~~~~~~~~l~~~i~~ 407 (455)
+|+.+++.-++++.|-+-== | -|-+||.++|||.|.-=+. +-++.+-. .-.. .|+-+.-+..-+.++..+.+.+
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~-~GV~VvdR~~~n~~e~v~~la~ 539 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEE-YGVYVVDRRDKNYDESVNQLAD 539 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGG-GTEEEE-SSSS-HHHHHHHHHH
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcC-CcEEEEeCCCCCHHHHHHHHHH
Confidence 47788888888866665211 3 3899999999999997662 22222211 1112 4666655556677777777766
Q ss_pred HHh-------HhHHHHHHHHHHHHHH
Q 044936 408 LMD-------NKRDEIMESTVKIAKM 426 (455)
Q Consensus 408 ~l~-------~~~~~~~~~a~~~~~~ 426 (455)
.|. ......|.+|++++++
T Consensus 540 ~l~~f~~~~~rqri~~Rn~ae~LS~~ 565 (633)
T PF05693_consen 540 FLYKFCQLSRRQRIIQRNRAERLSDL 565 (633)
T ss_dssp HHHHHHT--HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 664 2223567777776655
No 165
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=55.32 E-value=28 Score=33.29 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=25.7
Q ss_pred CCCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccch
Q 044936 87 RLPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (455)
Q Consensus 87 ~~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~~ 120 (455)
+.||+|| +|+..- .+..=|.++|||+|.+.=+.+
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDTn~ 186 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDTNC 186 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeCCC
Confidence 3799876 787654 777779999999998765543
No 166
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=55.11 E-value=71 Score=29.46 Aligned_cols=21 Identities=33% Similarity=0.366 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
..|++.|.+.| +|+++.|...
T Consensus 22 ~aL~~~l~~~g-~V~VvAP~~~ 42 (257)
T PRK13932 22 HVLAASMKKIG-RVTVVAPAEP 42 (257)
T ss_pred HHHHHHHHhCC-CEEEEcCCCC
Confidence 57899998888 7999988664
No 167
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=54.99 E-value=41 Score=32.12 Aligned_cols=132 Identities=14% Similarity=0.060 Sum_probs=73.7
Q ss_pred CcEEEEeec-Ccc--cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEe--ccCH-HHH
Q 044936 265 GTVLYVSFG-SFI--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVS--WAPQ-EEV 338 (455)
Q Consensus 265 ~~vv~vs~G-s~~--~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~-~~l 338 (455)
++.|.+..| |.. .++.+.+.++++.+...+.++++..+++. +....+.+.+.. .++.+.+ .+.+ ..+
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~------e~~~~~~i~~~~-~~~~l~g~~sL~elaal 250 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH------EEQRAKRLAEGF-PYVEVLPKLSLEQVARV 250 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH------HHHHHHHHHccC-CcceecCCCCHHHHHHH
Confidence 344444444 443 47889999999999777777765443210 001111111111 2233332 3444 458
Q ss_pred hhcccccceeeecCchhHHHHHHhCCceeecCCcchHHHH------HHHhhhhceeeeecCCCCCHHHHHHHHHHHHh
Q 044936 339 LAHQAIGGFLTHSGWNSTLESMVAGVPMICWPQIGDQQVN------SRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD 410 (455)
Q Consensus 339 l~~~~~~~~i~hgG~~s~~eal~~GvP~l~~P~~~dq~~n------a~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~ 410 (455)
+.++++ ||+... |.++=|.+.|+|+|++=--.+...+ ...+ . -.+..+ ..++.+++.++++++|.
T Consensus 251 i~~a~l--~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~--~~~~cm-~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 251 LAGAKA--VVSVDT-GLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-R--SPGKSM-ADLSAETVFQKLETLIS 321 (322)
T ss_pred HHhCCE--EEecCC-cHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-c--CCCccc-ccCCHHHHHHHHHHHhh
Confidence 899888 999876 6788889999999985211111111 1111 0 011112 57888999888887763
No 168
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=53.13 E-value=29 Score=29.37 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=27.2
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 044936 267 VLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVI 301 (455)
Q Consensus 267 vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~ 301 (455)
.+|+++||....+...++..+++|.+.+..-++..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 59999999987777778888999988765334444
No 169
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=52.88 E-value=68 Score=29.21 Aligned_cols=33 Identities=21% Similarity=0.450 Sum_probs=24.7
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccch
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~~ 120 (455)
-||+|+ +|+..- -|..=|.++|||++.+.=+.+
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 599865 888654 566678899999998755543
No 170
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=52.75 E-value=62 Score=31.01 Aligned_cols=96 Identities=10% Similarity=0.114 Sum_probs=59.5
Q ss_pred CCcEEEEeecCc--c--cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCee-EEe--ccCH-
Q 044936 264 SGTVLYVSFGSF--I--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGC-IVS--WAPQ- 335 (455)
Q Consensus 264 ~~~vv~vs~Gs~--~--~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~p~- 335 (455)
.++.|.+.-|+. . .++.+.+.++++.+.+.+.+++.. +++... ...+.+.+..+.++. +.+ -+.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~------~~~~~i~~~~~~~~~~l~g~~sL~el 245 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDH------PAGNEIEALLPGELRNLAGETSLDEA 245 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhH------HHHHHHHHhCCcccccCCCCCCHHHH
Confidence 456788887773 2 478899999999988777777654 322100 111122222223322 223 2344
Q ss_pred HHHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 336 EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 336 ~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
..++.++++ ||+.-. |-++=|.+.|+|+|++
T Consensus 246 ~ali~~a~l--~I~~DS-Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 246 VDLIALAKA--VVTNDS-GLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 458888887 998875 6777788999999874
No 171
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=52.60 E-value=56 Score=25.76 Aligned_cols=82 Identities=23% Similarity=0.254 Sum_probs=47.4
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
++.+++.|.+.|++|. + ++...+.+.+. ++.+..+.+....+. .+ .+.+.+
T Consensus 15 ~~~~a~~l~~~G~~i~-a-T~gTa~~L~~~-----------gi~~~~v~~~~~~~~----~~------------~~~i~~ 65 (116)
T cd01423 15 LLPTAQKLSKLGYKLY-A-TEGTADFLLEN-----------GIPVTPVAWPSEEPQ----ND------------KPSLRE 65 (116)
T ss_pred HHHHHHHHHHCCCEEE-E-ccHHHHHHHHc-----------CCCceEeeeccCCCC----CC------------chhHHH
Confidence 4678999999999883 3 44555555543 344333321000000 00 144556
Q ss_pred HHhcCCCCCcEEEECCC---------cchhHHHHHHcCCCeE
Q 044936 81 LLMTPGRLPTCIISDSI---------MSFTIDVAEELNIPII 113 (455)
Q Consensus 81 ll~~~~~~~D~II~D~~---------~~~~~~lA~~lgIP~v 113 (455)
++++. ++|+||.-+. .+.-...|-.+|||++
T Consensus 66 ~i~~~--~idlVIn~~~~~~~~~~~~~~~iRr~Av~~~ip~i 105 (116)
T cd01423 66 LLAEG--KIDLVINLPSNRGKRVLDNDYVMRRAADDFAVPLI 105 (116)
T ss_pred HHHcC--CceEEEECCCCCCCccccCcEeeehhhHhhCCccc
Confidence 66654 8999997543 2344567889999996
No 172
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=52.51 E-value=1.5e+02 Score=27.52 Aligned_cols=97 Identities=11% Similarity=-0.028 Sum_probs=48.3
Q ss_pred HHHHHHHHhC---CCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHH
Q 044936 2 LTLAELFSHA---GFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAF 78 (455)
Q Consensus 2 l~LA~~L~~r---Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (455)
..|++.|.+. |++|+++.|.....-.. ...+....++...+.++. . .....+.+.+. -.+
T Consensus 17 ~aL~~~l~~~~~~~~~V~VVAP~~eqSg~g------haiT~~~pl~~~~~~~~~---y-av~GTPaDCV~-------lal 79 (261)
T PRK13931 17 EVLEQIATELAGPDGEVWTVAPAFEQSGVG------HCISYTHPMMIAELGPRR---F-AAEGSPADCVL-------AAL 79 (261)
T ss_pred HHHHHHHHHhccCCCeEEEEeCCCCCCCCc------ccccCCCCeEEEEeCCCe---E-EEcCchHHHHH-------HHH
Confidence 4677777763 47999998866432221 112223345555543110 0 01122222111 122
Q ss_pred HHHHhcCCCCCcEEEECC----------Ccc---hhHHHHHHcCCCeEEEcc
Q 044936 79 RRLLMTPGRLPTCIISDS----------IMS---FTIDVAEELNIPIITFRP 117 (455)
Q Consensus 79 ~~ll~~~~~~~D~II~D~----------~~~---~~~~lA~~lgIP~v~~~~ 117 (455)
..++.. .+||+||+-. +++ .|..-|..+|||.+.++.
T Consensus 80 ~~~~~~--~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 80 YDVMKD--APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred HHhcCC--CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 333331 2789998633 333 233445678999999875
No 173
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=51.76 E-value=1.4e+02 Score=24.95 Aligned_cols=138 Identities=12% Similarity=0.096 Sum_probs=68.3
Q ss_pred EEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccce
Q 044936 268 LYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGF 347 (455)
Q Consensus 268 v~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~ 347 (455)
|-|-+||.. +....+++...|+..+..+-..+-. ....|+.+. .++ .-+.+..++.|
T Consensus 3 V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~s--------aHR~p~~l~----------~~~---~~~~~~~~~vi 59 (150)
T PF00731_consen 3 VAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVAS--------AHRTPERLL----------EFV---KEYEARGADVI 59 (150)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE----------TTTSHHHHH----------HHH---HHTTTTTESEE
T ss_pred EEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEe--------ccCCHHHHH----------HHH---HHhccCCCEEE
Confidence 566677765 5677888999999988776544421 112333221 111 11111123348
Q ss_pred eeecCchhHHHHHH---hCCceeecCCcchHHH--H--HHHhhhhceeeeecCCCCCHHHHHHHHHHHHh--HhHHHHHH
Q 044936 348 LTHSGWNSTLESMV---AGVPMICWPQIGDQQV--N--SRCVSEIWKIGLDMKDTCDRSTIENLVRDLMD--NKRDEIME 418 (455)
Q Consensus 348 i~hgG~~s~~eal~---~GvP~l~~P~~~dq~~--n--a~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~--~~~~~~~~ 418 (455)
|.=.|...-+-++. .-.|+|++|...++.. . ...+.---|+.+..-..=++..-.-..-++|. | +.+++
T Consensus 60 Ia~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~~d--~~l~~ 137 (150)
T PF00731_consen 60 IAVAGMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILALKD--PELRE 137 (150)
T ss_dssp EEEEESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHTT---HHHHH
T ss_pred EEECCCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhcCC--HHHHH
Confidence 88888554333332 2789999998665432 1 12222212555433210033333333445665 5 78888
Q ss_pred HHHHHHHHHHHH
Q 044936 419 STVKIAKMARDA 430 (455)
Q Consensus 419 ~a~~~~~~~~~~ 430 (455)
+.+..++..++.
T Consensus 138 kl~~~~~~~~~~ 149 (150)
T PF00731_consen 138 KLRAYREKMKEK 149 (150)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcc
Confidence 888888776653
No 174
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=51.75 E-value=29 Score=31.51 Aligned_cols=98 Identities=8% Similarity=0.143 Sum_probs=52.3
Q ss_pred CCcEEEEeecCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCe-eEEec--cCH-H
Q 044936 264 SGTVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERG-CIVSW--APQ-E 336 (455)
Q Consensus 264 ~~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~p~-~ 336 (455)
+++.|.+..|+.. .++.+.+.++++.|.+.+.+++...++...+ ...-+.+.+..+.++ .+.+- +.+ .
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQE-----KEIADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHH-----HHHHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHH-----HHHHHHHHHhcccceEeecCCCCHHHHH
Confidence 5566777777754 4688999999999988776665543211000 000001111112222 22222 333 4
Q ss_pred HHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
.++.++++ +|+.-. |.++=|.+.|+|+|++
T Consensus 179 ali~~a~~--~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 179 ALISRADL--VIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHTSSE--EEEESS-HHHHHHHHTT--EEEE
T ss_pred HHHhcCCE--EEecCC-hHHHHHHHHhCCEEEE
Confidence 58888887 888876 6888889999999997
No 175
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=51.27 E-value=68 Score=25.16 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=46.8
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
++.+|+.|.+.||++ ++ ++...+.+.+. ++++..+... +++ ..+.+.+
T Consensus 14 ~~~~a~~l~~~G~~i-~A-T~gTa~~L~~~-----------Gi~~~~v~~~-~~~------------------g~~~i~~ 61 (112)
T cd00532 14 LVDLAPKLSSDGFPL-FA-TGGTSRVLADA-----------GIPVRAVSKR-HED------------------GEPTVDA 61 (112)
T ss_pred HHHHHHHHHHCCCEE-EE-CcHHHHHHHHc-----------CCceEEEEec-CCC------------------CCcHHHH
Confidence 468999999999988 34 44555555543 4554443211 010 1234455
Q ss_pred HHhc-CCCCCcEEEECC--Cc--------chhHHHHHHcCCCeEE
Q 044936 81 LLMT-PGRLPTCIISDS--IM--------SFTIDVAEELNIPIIT 114 (455)
Q Consensus 81 ll~~-~~~~~D~II~D~--~~--------~~~~~lA~~lgIP~v~ 114 (455)
++++ . ++|+||.-+ .. +--...|-.++||++.
T Consensus 62 ~i~~~g--~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T 104 (112)
T cd00532 62 AIAEKG--KFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTT 104 (112)
T ss_pred HHhCCC--CEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEE
Confidence 5554 4 899998633 22 1223457788999986
No 176
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=51.18 E-value=1e+02 Score=28.74 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.3
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 044936 3 TLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~ 21 (455)
+|..+|.+.||+||++|=.
T Consensus 13 ~L~~~L~~~gh~v~iltR~ 31 (297)
T COG1090 13 ALTARLRKGGHQVTILTRR 31 (297)
T ss_pred HHHHHHHhCCCeEEEEEcC
Confidence 5788899999999999843
No 177
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=50.68 E-value=58 Score=31.54 Aligned_cols=97 Identities=12% Similarity=0.193 Sum_probs=59.5
Q ss_pred CcEEEEeecCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcC-CC-eeEEec--cCH-H
Q 044936 265 GTVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTK-ER-GCIVSW--APQ-E 336 (455)
Q Consensus 265 ~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~--~p~-~ 336 (455)
++.|.+.-|+.. .++.+.+.++++.|.+.+.++++..+++..+ ....+.+.+... .+ +-+.+- +.+ .
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e-----~~~~~~i~~~~~~~~~~~l~g~~sL~el~ 257 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDD-----LACVNEIAQGCQTPPVTALAGKTTFPELG 257 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHH-----HHHHHHHHHhcCCCccccccCCCCHHHHH
Confidence 466778888753 4788999999999987788877654321000 000011111111 12 122332 344 4
Q ss_pred HHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
.++.++++ ||++-. |-++=|.+.|+|.|++
T Consensus 258 ali~~a~l--~v~nDS-Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 258 ALIDHAQL--FIGVDS-APAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHhCCE--EEecCC-HHHHHHHHcCCCEEEE
Confidence 58889888 999875 6777788999999875
No 178
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=50.50 E-value=1.1e+02 Score=28.46 Aligned_cols=21 Identities=33% Similarity=0.289 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
..|++.|.+.| +|+++.|...
T Consensus 17 ~aL~~al~~~g-~V~VvAP~~e 37 (266)
T PRK13934 17 RLLYEFVSPLG-EVDVVAPETP 37 (266)
T ss_pred HHHHHHHHhCC-cEEEEccCCC
Confidence 57899998888 7999988664
No 179
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=50.25 E-value=92 Score=24.21 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=48.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRR 80 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (455)
++.+++.|.+.|+++ ++ ++...+.+... ++.+..+...- + ..+.+.+
T Consensus 15 ~~~~~~~l~~~G~~l-~a-T~gT~~~l~~~-----------gi~~~~v~~~~--~------------------~~~~i~~ 61 (110)
T cd01424 15 AVEIAKRLAELGFKL-VA-TEGTAKYLQEA-----------GIPVEVVNKVS--E------------------GRPNIVD 61 (110)
T ss_pred HHHHHHHHHHCCCEE-EE-chHHHHHHHHc-----------CCeEEEEeecC--C------------------CchhHHH
Confidence 467899999999998 34 44455555443 45544432100 0 1233455
Q ss_pred HHhcCCCCCcEEEECCC-------cchhHHHHHHcCCCeEE
Q 044936 81 LLMTPGRLPTCIISDSI-------MSFTIDVAEELNIPIIT 114 (455)
Q Consensus 81 ll~~~~~~~D~II~D~~-------~~~~~~lA~~lgIP~v~ 114 (455)
++++. ++|+||.-+- .++-...|-.+|||++.
T Consensus 62 ~i~~~--~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 62 LIKNG--EIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred HHHcC--CeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 55544 7999997442 23455678899999984
No 180
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=50.17 E-value=38 Score=32.90 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
..+++.|.+.||+|+++++..
T Consensus 19 ~~l~~~l~~~g~~v~~~~~~~ 39 (372)
T cd03792 19 HSLVPLMRDLGVDTRWEVIKG 39 (372)
T ss_pred HHHHHHHHHcCCCceEEecCC
Confidence 478999999999999998743
No 181
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=49.90 E-value=1.1e+02 Score=28.16 Aligned_cols=21 Identities=29% Similarity=0.260 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
..|++.|.+. |+|+++.|...
T Consensus 17 ~aL~~~l~~~-~~V~VvAP~~~ 37 (250)
T PRK00346 17 RALAEALREL-ADVTVVAPDRE 37 (250)
T ss_pred HHHHHHHHhC-CCEEEEeCCCC
Confidence 5789999998 79999988664
No 182
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=49.50 E-value=18 Score=31.52 Aligned_cols=21 Identities=29% Similarity=0.333 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
..||+++..||++||+++.+.
T Consensus 33 ~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 33 AALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp HHHHHHHHHTT-EEEEEE-TT
T ss_pred HHHHHHHHHCCCEEEEEecCc
Confidence 368999999999999999864
No 183
>PLN02316 synthase/transferase
Probab=49.27 E-value=1.8e+02 Score=32.85 Aligned_cols=20 Identities=10% Similarity=0.169 Sum_probs=18.1
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 044936 3 TLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~ 22 (455)
.|+++|+++||+|.++++..
T Consensus 612 sLp~ALa~~Gh~V~VitP~Y 631 (1036)
T PLN02316 612 SLSRAVQDLNHNVDIILPKY 631 (1036)
T ss_pred HHHHHHHHcCCEEEEEecCC
Confidence 69999999999999999854
No 184
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=48.36 E-value=56 Score=35.37 Aligned_cols=110 Identities=13% Similarity=0.110 Sum_probs=59.9
Q ss_pred EEeccCHHH---Hhhcccccceeee---cCch-hHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHHHH
Q 044936 329 IVSWAPQEE---VLAHQAIGGFLTH---SGWN-STLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTI 401 (455)
Q Consensus 329 ~~~~~p~~~---ll~~~~~~~~i~h---gG~~-s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l 401 (455)
+.+++++.+ ++..+++ |+.- -|.| .+.|++++|+|-.++|...+----+..+ .-|+.+ ...+.+++
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv-~P~d~~~l 418 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLV-NPNDIEGI 418 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEE-CCCCHHHH
Confidence 346778765 6777777 6654 2544 7889999976522222211111111112 125555 44578999
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHh
Q 044936 402 ENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRS 450 (455)
Q Consensus 402 ~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~ 450 (455)
+++|.+++....+..+++.+++++.++. -+...-.+++++.+..
T Consensus 419 a~ai~~~l~~~~~e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 419 AAAIKRALEMPEEEQRERMQAMQERLRR-----YDVHKWASDFLDELRE 462 (726)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHH
Confidence 9999999873113444444444444332 2444455556555543
No 185
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=48.26 E-value=60 Score=31.26 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=60.1
Q ss_pred CCcEEEEeecCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCC-Cee-EEec--cCH-
Q 044936 264 SGTVLYVSFGSFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKE-RGC-IVSW--APQ- 335 (455)
Q Consensus 264 ~~~vv~vs~Gs~~---~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--~p~- 335 (455)
.++.|.+..|+.. .++.+.+.++++.|...+.++++..++...+ ....+.+.+..+. ++. +.+- +.+
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e-----~~~~~~i~~~~~~~~~~~l~g~~sL~el 254 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDE-----LAMVNEIAQGCQTPRVTSLAGKLTLPQL 254 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHH-----HHHHHHHHhhCCCCcccccCCCCCHHHH
Confidence 3456777777753 4688899999999987778877653221000 0011111111111 221 2332 344
Q ss_pred HHHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 336 EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 336 ~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
..++.++++ ||++ -.|.++=|.+.|+|.|++
T Consensus 255 ~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 255 AALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 458889888 9998 457888899999999985
No 186
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=47.85 E-value=74 Score=30.74 Aligned_cols=96 Identities=8% Similarity=0.039 Sum_probs=59.0
Q ss_pred CCcEEEEeecCc--c--cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCC----Ce-eEEec--
Q 044936 264 SGTVLYVSFGSF--I--KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKE----RG-CIVSW-- 332 (455)
Q Consensus 264 ~~~vv~vs~Gs~--~--~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~-- 332 (455)
+++.|.+.-|+. . .++.+.+.++++.|...+.++++.-+++ .. ...+.+.+..+. ++ -+.+-
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~-e~------~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK-DH------EAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH-hH------HHHHHHHHhcccccccceeeccCCCC
Confidence 456788888874 2 4788999999998876677776543211 00 111111111111 11 12232
Q ss_pred cCH-HHHhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 333 APQ-EEVLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 333 ~p~-~~ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
+.+ ..++.++++ ||+.-. |-++=|.+.|+|+|++
T Consensus 252 L~el~ali~~a~l--~I~nDT-Gp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTNDS-GLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEecCC-hHHHHHHHhCCCEEEE
Confidence 344 358889887 998764 6788889999999874
No 187
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=47.82 E-value=2e+02 Score=29.48 Aligned_cols=109 Identities=13% Similarity=0.082 Sum_probs=64.8
Q ss_pred eEEeccCHHH---Hhhcccccceee--ecCchhH-HHHHHhCC----ceeecCCcchHHHHHHHhhhhceeeeecCCCCC
Q 044936 328 CIVSWAPQEE---VLAHQAIGGFLT--HSGWNST-LESMVAGV----PMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCD 397 (455)
Q Consensus 328 ~~~~~~p~~~---ll~~~~~~~~i~--hgG~~s~-~eal~~Gv----P~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~ 397 (455)
.+.+.+|+.+ ++..+++ ++|| .-|+|-+ .|.+++.. |+|.=-+. -+. +.+.-++.+ +-.+
T Consensus 365 ~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Gaa---~~l~~AllV-NP~d 434 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GAA---VELKGALLT-NPYD 434 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cch---hhcCCCEEE-CCCC
Confidence 3447788766 5667777 3333 3488855 49988876 44432211 111 112334555 5678
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Q 044936 398 RSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSM 451 (455)
Q Consensus 398 ~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~ 451 (455)
.++++++|.+.|+...+.-+++.+++.+.++.. ....=.+.|+++|...
T Consensus 435 ~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 435 PVRMDETIYVALAMPKAEQQARMREMFDAVNYY-----DVQRWADEFLAAVSPQ 483 (487)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHhhhc
Confidence 999999999999832244455666666655543 4444567787777654
No 188
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=45.87 E-value=17 Score=33.24 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=16.5
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 044936 3 TLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~ 22 (455)
.|+++|+++||+|++++|..
T Consensus 24 ~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 24 SLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHTT-EEEEEEE-T
T ss_pred HHHHHHHhcCCeEEEEEccc
Confidence 68999999999999999854
No 189
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=42.65 E-value=3.2e+02 Score=26.49 Aligned_cols=81 Identities=19% Similarity=0.215 Sum_probs=60.9
Q ss_pred CCeeEE-eccCHH---HHhhcccccceeee--cCchhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecC-CCCC
Q 044936 325 ERGCIV-SWAPQE---EVLAHQAIGGFLTH--SGWNSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK-DTCD 397 (455)
Q Consensus 325 ~~~~~~-~~~p~~---~ll~~~~~~~~i~h--gG~~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~-~~~~ 397 (455)
+|+.+. +++|-. .+|..++++-|.+. =|.|++.-.|..|+|++.- .+-+.+-. +++ .|+-+... +.++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~-l~~-~~ipVlf~~d~L~ 319 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQD-LKE-QGIPVLFYGDELD 319 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHH-HHh-CCCeEEeccccCC
Confidence 467654 788764 59999999777764 5899999999999999874 33344444 334 47777666 7899
Q ss_pred HHHHHHHHHHHHh
Q 044936 398 RSTIENLVRDLMD 410 (455)
Q Consensus 398 ~~~l~~~i~~~l~ 410 (455)
.+.|+++=+++..
T Consensus 320 ~~~v~ea~rql~~ 332 (360)
T PF07429_consen 320 EALVREAQRQLAN 332 (360)
T ss_pred HHHHHHHHHHHhh
Confidence 9999998888865
No 190
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=40.11 E-value=77 Score=26.94 Aligned_cols=43 Identities=28% Similarity=0.359 Sum_probs=25.5
Q ss_pred hhHHHHHHHHhcCCCCCcEEEECCCcchhH--H-HHH--Hc-CCCeEEEcc
Q 044936 73 VSKLAFRRLLMTPGRLPTCIISDSIMSFTI--D-VAE--EL-NIPIITFRP 117 (455)
Q Consensus 73 ~~~~~l~~ll~~~~~~~D~II~D~~~~~~~--~-lA~--~l-gIP~v~~~~ 117 (455)
.+.+.+.+++++. +||+||+...+.... . +-+ .+ ++|.+.+.+
T Consensus 76 ~~~~~l~~~l~~~--~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 76 LFARRLIRLLREF--QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHHhhc--CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 3455667777766 899999877654222 2 222 24 577665433
No 191
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=39.67 E-value=28 Score=30.19 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=17.1
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 044936 3 TLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~ 22 (455)
.|.++..+|||+||-++-..
T Consensus 15 ~i~~EA~~RGHeVTAivRn~ 34 (211)
T COG2910 15 RILKEALKRGHEVTAIVRNA 34 (211)
T ss_pred HHHHHHHhCCCeeEEEEeCh
Confidence 57889999999999998644
No 192
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.49 E-value=1e+02 Score=29.65 Aligned_cols=95 Identities=13% Similarity=0.151 Sum_probs=59.2
Q ss_pred CcEEEEeec-Ccc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEec--cCH-HH
Q 044936 265 GTVLYVSFG-SFI---KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSW--APQ-EE 337 (455)
Q Consensus 265 ~~vv~vs~G-s~~---~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~-~~ 337 (455)
++.|.++-| |.. .++.+.+.++++.+.+.+.++++..+++ + ....+.+.+..+....+.+- +.| ..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e-----~e~~~~i~~~~~~~~~l~~k~sL~e~~~ 247 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--E-----EERAEEIAKGLPNAVILAGKTSLEELAA 247 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--H-----HHHHHHHHHhcCCccccCCCCCHHHHHH
Confidence 577888888 442 5788999999999999886665543221 1 01111222222222223333 344 35
Q ss_pred HhhcccccceeeecCchhHHHHHHhCCceeec
Q 044936 338 VLAHQAIGGFLTHSGWNSTLESMVAGVPMICW 369 (455)
Q Consensus 338 ll~~~~~~~~i~hgG~~s~~eal~~GvP~l~~ 369 (455)
++.++++ ||+.-. |-++=|.+.|+|.|++
T Consensus 248 li~~a~l--~I~~DS-g~~HlAaA~~~P~I~i 276 (334)
T COG0859 248 LIAGADL--VIGNDS-GPMHLAAALGTPTIAL 276 (334)
T ss_pred HHhcCCE--EEccCC-hHHHHHHHcCCCEEEE
Confidence 7778887 787654 6677788899999985
No 193
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=38.05 E-value=69 Score=30.03 Aligned_cols=75 Identities=13% Similarity=0.233 Sum_probs=52.7
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhH
Q 044936 277 KLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNST 356 (455)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~ 356 (455)
..+.+..+++.+|+.....+.||..++. . .-.++.++++...+-.+|.+ ||=..-..++
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG-------~------------ga~rlL~~ld~~~~~~~pK~--~iGySDiTaL 103 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGG-------Y------------GANRLLPYLDYDLIRANPKI--FVGYSDITAL 103 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCc-------C------------CHHHhhhhCCHHHHhhCCeE--EEEecHHHHH
Confidence 3456779999999999999999998632 1 12234455666666677777 8877777777
Q ss_pred HHHHHh--CCceeecCCc
Q 044936 357 LESMVA--GVPMICWPQI 372 (455)
Q Consensus 357 ~eal~~--GvP~l~~P~~ 372 (455)
+-+++. |++.+--|+.
T Consensus 104 ~~~l~~~~g~~t~hGp~~ 121 (282)
T cd07025 104 HLALYAKTGLVTFHGPML 121 (282)
T ss_pred HHHHHHhcCceEEECccc
Confidence 777654 7777777753
No 194
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=37.45 E-value=1.5e+02 Score=28.82 Aligned_cols=98 Identities=8% Similarity=0.070 Sum_probs=52.8
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCCh-hhh-hhcCCCee-----E---------
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPV-ELD-QGTKERGC-----I--------- 329 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~-----~--------- 329 (455)
.+++.+-||....-+. ..+++.|++.++.++|+......+ ...+|. ++. ..++...+ +
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e----~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 76 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE----KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLV 76 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc----cccCcccCCcEEEEeccCcCCCchHHHHHHHHHH
Confidence 4677777776643332 446677777789999987543221 001121 110 00110000 0
Q ss_pred -EeccCHHHHhhcccccceeeecCchh---HHHHHHhCCceeec
Q 044936 330 -VSWAPQEEVLAHQAIGGFLTHSGWNS---TLESMVAGVPMICW 369 (455)
Q Consensus 330 -~~~~p~~~ll~~~~~~~~i~hgG~~s---~~eal~~GvP~l~~ 369 (455)
..+.--..++..-+-..+|++||.-| +..|...|+|.++.
T Consensus 77 ~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 77 MKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 01111123454333334999999986 89999999999873
No 195
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=37.24 E-value=51 Score=23.81 Aligned_cols=21 Identities=29% Similarity=0.482 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
+.+|..|+++|.+||++....
T Consensus 12 ~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 12 IELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHhCcEEEEEeccc
Confidence 578999999999999998754
No 196
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=36.97 E-value=1.6e+02 Score=27.61 Aligned_cols=21 Identities=10% Similarity=0.192 Sum_probs=18.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
..|+++|.+.||+|.+++...
T Consensus 19 ~~l~~~l~~~~~~v~~~~~~~ 39 (365)
T cd03807 19 VRLLKGLDRDRFEHVVISLTD 39 (365)
T ss_pred HHHHHHhhhccceEEEEecCc
Confidence 578999999999999998643
No 197
>PRK12342 hypothetical protein; Provisional
Probab=36.96 E-value=65 Score=29.68 Aligned_cols=39 Identities=10% Similarity=0.031 Sum_probs=27.2
Q ss_pred HHHHHhcCCCCCcEEEECCCcc------hhHHHHHHcCCCeEEEccc
Q 044936 78 FRRLLMTPGRLPTCIISDSIMS------FTIDVAEELNIPIITFRPY 118 (455)
Q Consensus 78 l~~ll~~~~~~~D~II~D~~~~------~~~~lA~~lgIP~v~~~~~ 118 (455)
+...++.. +||+|++---.. -+..+|+.||+|++.+...
T Consensus 101 La~~i~~~--~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 101 LAAAIEKI--GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHh--CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 34444444 699999654332 4788999999999986543
No 198
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=36.92 E-value=36 Score=27.24 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
++|+.+-++|||+|.++.+..
T Consensus 21 ~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 21 FALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp HHHHHHHHHTT-EEEEE-GGG
T ss_pred HHHHHHHHHCCCEEEEEEcCc
Confidence 468889999999999998754
No 199
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=36.57 E-value=44 Score=23.54 Aligned_cols=19 Identities=37% Similarity=0.574 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCCEEEEEeC
Q 044936 2 LTLAELFSHAGFRVTFVNT 20 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~ 20 (455)
|..|..|+++|++|+++=.
T Consensus 9 l~aA~~L~~~g~~v~v~E~ 27 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEK 27 (68)
T ss_dssp HHHHHHHHHTTSEEEEEES
T ss_pred HHHHHHHHHCCCcEEEEec
Confidence 4678899999999999954
No 200
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=36.54 E-value=3.9e+02 Score=25.54 Aligned_cols=96 Identities=20% Similarity=0.155 Sum_probs=56.4
Q ss_pred HHHHHHHhCCCEEEEEeCCcc--hhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHH-HHHHhHhhhhHHHHH
Q 044936 3 TLAELFSHAGFRVTFVNTEQY--HDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIK-DWFCSDKPVSKLAFR 79 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 79 (455)
.|-.+|.++||+|.+.+-+.. .+.+... |+.+..+... ....+. ..+....+ .-.+.
T Consensus 18 ~lI~elekkG~ev~iT~rd~~~v~~LLd~y-----------gf~~~~Igk~-------g~~tl~~Kl~~~~eR--~~~L~ 77 (346)
T COG1817 18 NLIWELEKKGHEVLITCRDFGVVTELLDLY-----------GFPYKSIGKH-------GGVTLKEKLLESAER--VYKLS 77 (346)
T ss_pred HHHHHHHhCCeEEEEEEeecCcHHHHHHHh-----------CCCeEeeccc-------CCccHHHHHHHHHHH--HHHHH
Confidence 466789999999988875432 2222222 4665555310 101111 11211111 22345
Q ss_pred HHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEcccchH
Q 044936 80 RLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFRPYSAH 121 (455)
Q Consensus 80 ~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~~~~~~ 121 (455)
++.... +||+.|. -..+-+..+|--+|+|.++|.-..-.
T Consensus 78 ki~~~~--kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ehA 116 (346)
T COG1817 78 KIIAEF--KPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEHA 116 (346)
T ss_pred HHHhhc--CCceEee-cCCcchhhHHhhcCCceEEecCChhH
Confidence 555555 8999998 44567888999999999998665443
No 201
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=36.18 E-value=2.4e+02 Score=24.87 Aligned_cols=147 Identities=8% Similarity=0.043 Sum_probs=73.5
Q ss_pred ccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcC-CCeeEEeccCHH
Q 044936 258 WLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTK-ERGCIVSWAPQE 336 (455)
Q Consensus 258 ~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~ 336 (455)
|++- ..+.++.|.-|.++ ...++.|...+..+.++- +. +.+.+.+..+ .++.......+.
T Consensus 5 ~l~l-~~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~----------~~~~l~~l~~~~~i~~~~~~~~~ 65 (202)
T PRK06718 5 MIDL-SNKRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE----------LTENLVKLVEEGKIRWKQKEFEP 65 (202)
T ss_pred EEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC----------CCHHHHHHHhCCCEEEEecCCCh
Confidence 4553 35678888776655 344566666677665442 21 1122211111 233333333334
Q ss_pred HHhhcccccceeeecCchhHHHHHH----hCCceeecCCcchHHHHHH-----HhhhhceeeeecC-C---CCCHHHHHH
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLESMV----AGVPMICWPQIGDQQVNSR-----CVSEIWKIGLDMK-D---TCDRSTIEN 403 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~eal~----~GvP~l~~P~~~dq~~na~-----~~~~~~g~g~~~~-~---~~~~~~l~~ 403 (455)
.-+..+++ +|.--+--.+.+.++ .++++-+ .|.+..+. .+.. -++-+.+. + -.-+..|++
T Consensus 66 ~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~-g~l~iaIsT~G~sP~la~~lr~ 138 (202)
T PRK06718 66 SDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHR-GKLTISVSTDGASPKLAKKIRD 138 (202)
T ss_pred hhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEc-CCeEEEEECCCCChHHHHHHHH
Confidence 45566666 777777666666554 3554433 34433332 2211 12333332 1 112245666
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 404 LVRDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 404 ~i~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
.|.+++......+-+...++++.+++.
T Consensus 139 ~ie~~~~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 139 ELEALYDESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred HHHHHcchhHHHHHHHHHHHHHHHHHh
Confidence 666665433356777777777777664
No 202
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=36.13 E-value=30 Score=35.14 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=17.8
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 044936 3 TLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~ 22 (455)
.|+++|+++||+|.++++..
T Consensus 25 ~L~~aL~~~G~~v~v~~p~y 44 (473)
T TIGR02095 25 ALPKALAALGHDVRVLLPAY 44 (473)
T ss_pred HHHHHHHHcCCeEEEEecCC
Confidence 68999999999999999743
No 203
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=35.26 E-value=28 Score=30.63 Aligned_cols=23 Identities=26% Similarity=0.310 Sum_probs=19.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
..|++.|.+.||+|+++.|....
T Consensus 17 ~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 17 RALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp HHHHHHHTTTSSEEEEEEESSST
T ss_pred HHHHHHHHhcCCeEEEEeCCCCC
Confidence 47899998889999999997653
No 204
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=35.03 E-value=63 Score=28.15 Aligned_cols=38 Identities=24% Similarity=0.280 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC
Q 044936 3 TLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP 49 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 49 (455)
.|+..|+++||+||+.+...+...- .....+++...+|
T Consensus 25 ~L~~~l~~~g~~v~Vyc~~~~~~~~---------~~~y~gv~l~~i~ 62 (185)
T PF09314_consen 25 ELAPRLVSKGIDVTVYCRSDYYPYK---------EFEYNGVRLVYIP 62 (185)
T ss_pred HHHHHHhcCCceEEEEEccCCCCCC---------CcccCCeEEEEeC
Confidence 5788889999999999875543211 1233477777765
No 205
>PLN02470 acetolactate synthase
Probab=34.86 E-value=1.5e+02 Score=31.09 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=51.9
Q ss_pred eecCcccC--CHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEe--c------cCHHHHhh
Q 044936 271 SFGSFIKL--GREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVS--W------APQEEVLA 340 (455)
Q Consensus 271 s~Gs~~~~--~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~p~~~ll~ 340 (455)
+|||.... ...-...+++.|++.|.+.++-+.++... .+-+.+. ..+++..+. . +=..--..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~------~l~dal~--~~~~i~~i~~rhE~~A~~~Adgyar~ 73 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASM------EIHQALT--RSNCIRNVLCRHEQGEVFAAEGYAKA 73 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccH------HHHHHHh--ccCCceEEEeccHHHHHHHHHHHHHH
Confidence 46776532 22335678999999999998877432110 1112221 012333321 1 11100112
Q ss_pred cccccceeeecCc------hhHHHHHHhCCceeecC
Q 044936 341 HQAIGGFLTHSGW------NSTLESMVAGVPMICWP 370 (455)
Q Consensus 341 ~~~~~~~i~hgG~------~s~~eal~~GvP~l~~P 370 (455)
...++++++|.|- +.+++|...++|+|++.
T Consensus 74 tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 74 SGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred hCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 2346668999884 48899999999999985
No 206
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=34.78 E-value=1.7e+02 Score=24.70 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=25.9
Q ss_pred cCHHHHhhcccccceeeecCchhHHH---HHHhCCceeecCC
Q 044936 333 APQEEVLAHQAIGGFLTHSGWNSTLE---SMVAGVPMICWPQ 371 (455)
Q Consensus 333 ~p~~~ll~~~~~~~~i~hgG~~s~~e---al~~GvP~l~~P~ 371 (455)
.+...++...+-..++--||.||+.| ++.+++|+++++.
T Consensus 82 ~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 82 FARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred chHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 34555554433344666788887655 5889999999875
No 207
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=34.46 E-value=3.6e+02 Score=26.36 Aligned_cols=82 Identities=21% Similarity=0.292 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCCCCCCCCChhhhh--hcCCCeeEEeccCHHH---Hhhcccccceeeec
Q 044936 279 GREQILEFWHGMVN--SGKRFLWVIRSDLIDGEPGVGPVPVELDQ--GTKERGCIVSWAPQEE---VLAHQAIGGFLTHS 351 (455)
Q Consensus 279 ~~~~~~~~~~~l~~--~~~~~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~---ll~~~~~~~~i~hg 351 (455)
..+.+.+++--+-+ .+.+|+..-.++... .+ ++..| .+.+++.+.+-+|+++ +|...++ |++-.
T Consensus 209 GiDll~~iIp~vc~~~p~vrfii~GDGPk~i------~l-ee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntS 279 (426)
T KOG1111|consen 209 GIDLLLEIIPSVCDKHPEVRFIIIGDGPKRI------DL-EEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTS 279 (426)
T ss_pred chHHHHHHHHHHHhcCCCeeEEEecCCcccc------hH-HHHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccH
Confidence 44566565544433 356887654322111 12 22222 3568888899999864 7888888 88765
Q ss_pred C----chhHHHHHHhCCceeec
Q 044936 352 G----WNSTLESMVAGVPMICW 369 (455)
Q Consensus 352 G----~~s~~eal~~GvP~l~~ 369 (455)
= --.+.||+.+|.|++..
T Consensus 280 lTEafc~~ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 280 LTEAFCMVIVEAASCGLPVVST 301 (426)
T ss_pred HHHHHHHHHHHHHhCCCEEEEe
Confidence 3 13678999999999864
No 208
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=34.42 E-value=1.4e+02 Score=28.74 Aligned_cols=21 Identities=10% Similarity=0.224 Sum_probs=17.8
Q ss_pred HHHHHHHHhC--CCEEEEEeCCc
Q 044936 2 LTLAELFSHA--GFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~r--Gh~Vt~~t~~~ 22 (455)
+.++++|.++ ||+|+++++..
T Consensus 21 ~~l~~~L~~~~~g~~v~v~~~~~ 43 (359)
T PRK09922 21 SNVINTFEESKINCEMFFFCRND 43 (359)
T ss_pred HHHHHHhhhcCcceeEEEEecCC
Confidence 5789999999 89999988744
No 209
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=34.39 E-value=77 Score=30.35 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=21.1
Q ss_pred CCcEEEECCCcchhHHHHHHcCCCeEEEcc
Q 044936 88 LPTCIISDSIMSFTIDVAEELNIPIITFRP 117 (455)
Q Consensus 88 ~~D~II~D~~~~~~~~lA~~lgIP~v~~~~ 117 (455)
+.|++|..- .+...+|..+|+|.+.++.
T Consensus 251 ~a~l~I~~D--SGp~HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 251 LAKAVVTND--SGLMHVAAALNRPLVALYG 278 (334)
T ss_pred hCCEEEeeC--CHHHHHHHHcCCCEEEEEC
Confidence 568898432 2567899999999998654
No 210
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=34.09 E-value=90 Score=30.05 Aligned_cols=40 Identities=20% Similarity=0.324 Sum_probs=27.0
Q ss_pred hHHHHHHHHhcCCCCCcEEEECCCcc-------hh---HHHHHHcCCCeEEE
Q 044936 74 SKLAFRRLLMTPGRLPTCIISDSIMS-------FT---IDVAEELNIPIITF 115 (455)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~II~D~~~~-------~~---~~lA~~lgIP~v~~ 115 (455)
....+.++++.. +||++|+-|.+. |+ ..+.++++||.+.-
T Consensus 68 a~~~i~~mv~~~--~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 68 ALKKILEMVKKL--KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred HHHHHHHHHHhc--CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 344455556655 899999999753 22 23456899999963
No 211
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=33.99 E-value=79 Score=26.14 Aligned_cols=37 Identities=11% Similarity=0.190 Sum_probs=29.1
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVI 301 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~ 301 (455)
.+.+|++++|+......+.++++++.+. .+.+++++.
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~ 86 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVN 86 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEE
Confidence 4578999999998777788888888874 357777764
No 212
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.05 E-value=1.7e+02 Score=24.59 Aligned_cols=75 Identities=13% Similarity=0.196 Sum_probs=50.7
Q ss_pred ecCCcchHHHHHHHhhhhceeeeecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Q 044936 368 CWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIED 447 (455)
Q Consensus 368 ~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~ 447 (455)
..|....+..+|+.+.++ --++ ..-..+.|.+.+..++.| +++-+-++.+++..+.++ |......+.+++-+
T Consensus 77 pyPWt~~~L~aa~el~ee-~eeL---s~deke~~~~sl~dL~~d-~PkT~vA~~rfKk~~~K~---g~~v~~~~~dIlVd 148 (158)
T PF10083_consen 77 PYPWTENALEAANELIEE-DEEL---SPDEKEQFKESLPDLTKD-TPKTKVAATRFKKILSKA---GSIVGDAIRDILVD 148 (158)
T ss_pred CCchHHHHHHHHHHHHHH-hhcC---CHHHHHHHHhhhHHHhhc-CCccHHHHHHHHHHHHHH---hHHHHHHHHHHHHH
Confidence 368788888888877663 1111 122346788889888884 488899999999998888 54445555665555
Q ss_pred HHh
Q 044936 448 IRS 450 (455)
Q Consensus 448 ~~~ 450 (455)
+.+
T Consensus 149 v~S 151 (158)
T PF10083_consen 149 VAS 151 (158)
T ss_pred HHH
Confidence 443
No 213
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=33.04 E-value=81 Score=25.48 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=26.5
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHHh--CCCcEEEEE
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMVN--SGKRFLWVI 301 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~~--~~~~~iw~~ 301 (455)
.+++++|||......+.+..+.+.+.+ .+..+-|.+
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~af 39 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAF 39 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 589999999886555667888888854 245677776
No 214
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=32.84 E-value=28 Score=28.38 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=21.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhcC
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYHDRLLG 29 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~~~~~~ 29 (455)
|-|+..|.++||+|+++.++.....++-
T Consensus 17 lYl~~~Lk~~G~~v~Va~npAA~kLl~v 44 (139)
T PF09001_consen 17 LYLSYKLKKKGFEVVVAGNPAALKLLEV 44 (139)
T ss_dssp HHHHHHHHCTTEEEEEEE-HHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEecCHHHHhHhhh
Confidence 4578899999999999999776555543
No 215
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=32.18 E-value=3.4e+02 Score=23.98 Aligned_cols=150 Identities=10% Similarity=0.106 Sum_probs=71.0
Q ss_pred ccccCCCCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhh-cCCCeeEEeccCHH
Q 044936 258 WLDSQPSGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQG-TKERGCIVSWAPQE 336 (455)
Q Consensus 258 ~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~ 336 (455)
|++- ..+.|+.|.-|... ..-++.|...|..+.++- ++ ..+.+.+- ...++..+.--.+.
T Consensus 4 ~l~l-~gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvs-p~----------~~~~l~~l~~~~~i~~~~~~~~~ 64 (205)
T TIGR01470 4 FANL-EGRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIA-EE----------LESELTLLAEQGGITWLARCFDA 64 (205)
T ss_pred EEEc-CCCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEc-CC----------CCHHHHHHHHcCCEEEEeCCCCH
Confidence 4543 24577878766654 333456666787765443 21 11121110 11244443211223
Q ss_pred HHhhcccccceeeecCchhHHH-----HHHhCCceeec--CCcchHHHHHHHhhhhceeeeecC-C---CCCHHHHHHHH
Q 044936 337 EVLAHQAIGGFLTHSGWNSTLE-----SMVAGVPMICW--PQIGDQQVNSRCVSEIWKIGLDMK-D---TCDRSTIENLV 405 (455)
Q Consensus 337 ~ll~~~~~~~~i~hgG~~s~~e-----al~~GvP~l~~--P~~~dq~~na~~~~~~~g~g~~~~-~---~~~~~~l~~~i 405 (455)
..+..+.+ +|..-|...+.+ |-..|+|+-++ |-..|=. .-..+ +.-++-+.+. + -.-+..|++.|
T Consensus 65 ~dl~~~~l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~-~pa~~-~~g~l~iaisT~G~sP~la~~lr~~i 140 (205)
T TIGR01470 65 DILEGAFL--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCSFI-FPSIV-DRSPVVVAISSGGAAPVLARLLRERI 140 (205)
T ss_pred HHhCCcEE--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEE-EeeEE-EcCCEEEEEECCCCCcHHHHHHHHHH
Confidence 44566665 777777654444 34467887432 2222211 11122 2112333332 1 12235667777
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 406 RDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 406 ~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
.+.+.+....+-+...++++.+++.
T Consensus 141 e~~l~~~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 141 ETLLPPSLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHhh
Confidence 7776533345666666666666654
No 216
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=31.86 E-value=2.7e+02 Score=23.64 Aligned_cols=20 Identities=20% Similarity=0.205 Sum_probs=16.4
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 044936 2 LTLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~ 21 (455)
-.+|.+|.++|++|.=++..
T Consensus 17 ~~~a~~L~~~G~rv~G~vQ~ 36 (159)
T PF10649_consen 17 AAFAARLRARGVRVAGLVQR 36 (159)
T ss_pred HHHHHHHHhCCCeEEEEecc
Confidence 46899999999999877653
No 217
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=31.52 E-value=26 Score=35.48 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=36.0
Q ss_pred hhHHHHHHhCCceeecCCcchHHHHHHHhhhhceeeeecCCCCCHH---HHHHHHHHHHhHhHHHHHHH
Q 044936 354 NSTLESMVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMKDTCDRS---TIENLVRDLMDNKRDEIMES 419 (455)
Q Consensus 354 ~s~~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~~~~~~~---~l~~~i~~~l~~~~~~~~~~ 419 (455)
-++.|||++|+|+++.=.. -=+.-+.. --.|..++. +.+ .+++++.+...| +.++.+
T Consensus 380 iv~IEAMa~glPvvAt~~G----GP~EiV~~-~~tG~l~dp--~~e~~~~~a~~~~kl~~~--p~l~~~ 439 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNG----GPAEIVVH-GVTGLLIDP--GQEAVAELADALLKLRRD--PELWAR 439 (495)
T ss_pred ceeHHHHhcCCCEEEecCC----CceEEEEc-CCcceeeCC--chHHHHHHHHHHHHHhcC--HHHHHH
Confidence 3899999999999986221 11122222 134555532 444 689999888888 777555
No 218
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=31.34 E-value=4.6e+02 Score=28.66 Aligned_cols=175 Identities=12% Similarity=0.107 Sum_probs=92.1
Q ss_pred cEEEEeecCcccC--CHHHHHHHHHHHHh------CCCcEEEEEeCCCCCCCCCCC-CCChhhhh--hcCCCeeEE-ecc
Q 044936 266 TVLYVSFGSFIKL--GREQILEFWHGMVN------SGKRFLWVIRSDLIDGEPGVG-PVPVELDQ--GTKERGCIV-SWA 333 (455)
Q Consensus 266 ~vv~vs~Gs~~~~--~~~~~~~~~~~l~~------~~~~~iw~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~-~~~ 333 (455)
.++.+.|-+-... ....+...+.-+.+ .+..||+.-+.++.+..|..- ..-..+.+ +.++++.++ +|=
T Consensus 477 d~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd 556 (778)
T cd04299 477 NVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYD 556 (778)
T ss_pred CccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCC
Confidence 4678888775432 22333333222322 356777776655444111100 00011111 345566655 662
Q ss_pred CH--HHHhhcccccceeee-----cCchhHHHHHHhCCceeecCC--cchHHHHHHHhhhhceeeeec-------CCCCC
Q 044936 334 PQ--EEVLAHQAIGGFLTH-----SGWNSTLESMVAGVPMICWPQ--IGDQQVNSRCVSEIWKIGLDM-------KDTCD 397 (455)
Q Consensus 334 p~--~~ll~~~~~~~~i~h-----gG~~s~~eal~~GvP~l~~P~--~~dq~~na~~~~~~~g~g~~~-------~~~~~ 397 (455)
-. ..|.+-+++=...+. ||.+.+. |+..|++.+.+-- +.+-+ +.. -.|.+|... .+..+
T Consensus 557 ~~lA~~LvaG~DvwLn~prrp~EAsGTSgMK-A~~NG~LnlSvlDGww~E~~-~g~---nGwaig~~~~~~~~~~~d~~d 631 (778)
T cd04299 557 MALARHLVQGVDVWLNTPRRPLEASGTSGMK-AALNGGLNLSVLDGWWDEGY-DGE---NGWAIGDGDEYEDDEYQDAEE 631 (778)
T ss_pred HHHHHHHHhhhhhcccCCCCCCCCCccchHH-HHHcCCeeeecccCcccccc-CCC---CceEeCCCccccChhhcchhh
Confidence 22 237777888666677 9985555 5559999998765 33322 221 112232211 13467
Q ss_pred HHHHHHHHHHHHhHhHHHHHHH-----HHHHHHHHHHHHHc---CCChHHHHHHHHHHH
Q 044936 398 RSTIENLVRDLMDNKRDEIMES-----TVKIAKMARDAVKE---GGSSYRNLEKLIEDI 448 (455)
Q Consensus 398 ~~~l~~~i~~~l~~~~~~~~~~-----a~~~~~~~~~~~~~---gg~~~~~~~~~~~~~ 448 (455)
++.|.+.+++.+. +.|.++ -.++.++++++++. -=++.+.+++-++++
T Consensus 632 a~~Ly~~Le~~i~---p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 632 AEALYDLLENEVI---PLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred HHHHHHHHHHHHH---HHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 7888888865554 455554 45677777777765 445555666655543
No 219
>cd01421 IMPCH Inosine monophosphate cyclohydrolase domain. This is the N-terminal domain in the purine biosynthesis pathway protein ATIC (purH). The bifunctional ATIC protein contains a C-terminal ATIC formylase domain that formylates 5-aminoimidazole-4-carboxamide-ribonucleotide. The IMPCH domain then converts the formyl-5-aminoimidazole-4-carboxamide-ribonucleotide to inosine monophosphate. This is the final step in de novo purine production.
Probab=30.38 E-value=1.4e+02 Score=25.96 Aligned_cols=83 Identities=10% Similarity=-0.022 Sum_probs=43.4
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC--CCCCCCCCCCccCH-HHHHHhH-hh-hhH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP--DGLPPDNPRFGIYI-KDWFCSD-KP-VSK 75 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~l~~~~~~~~~~~-~~~~~~~-~~-~~~ 75 (455)
++.||+.|.+.|+++. .+....+.+.+. ||.+..+. .+.|+.-...-+-+ +...... .+ ...
T Consensus 13 l~~lAk~L~~lGf~I~--AT~GTAk~L~e~-----------GI~v~~V~k~TgfpE~l~GRVKTLHP~ihggiL~~~~~~ 79 (187)
T cd01421 13 LVEFAKELVELGVEIL--STGGTAKFLKEA-----------GIPVTDVSDITGFPEILGGRVKTLHPKIHGGILARRDNE 79 (187)
T ss_pred HHHHHHHHHHCCCEEE--EccHHHHHHHHc-----------CCeEEEhhhccCCcHhhCCccccCChhhhhhhhcCCCCh
Confidence 3689999999999983 444566666655 56666664 24554311111111 1111111 11 123
Q ss_pred HHHHHHHhcCCCCCcEEEECCC
Q 044936 76 LAFRRLLMTPGRLPTCIISDSI 97 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~ 97 (455)
... ++-+..-...|+||++..
T Consensus 80 ~~~-~~~~~~i~~idlVvvNlY 100 (187)
T cd01421 80 EHK-DLEEHGIEPIDLVVVNLY 100 (187)
T ss_pred hHH-HHHHcCCCCeeEEEEccc
Confidence 333 333332128999999874
No 220
>TIGR00345 arsA arsenite-activated ATPase (arsA). The N-terminal 50 amino acids hits Pfam families NB-ARC and fer4_NifH. residues 4-11 of the seed alignment contain a potential ATP binding site. The function of the gene product is to catalyze the extrusion of the oxyanions arsenite, antimonite and arsenate for detoxification. Some members of this family contain a duplication so the model finds hits twice.
Probab=30.29 E-value=1.9e+02 Score=27.07 Aligned_cols=22 Identities=27% Similarity=0.354 Sum_probs=18.7
Q ss_pred HHHHHHHhCCCEEEEEeCCcch
Q 044936 3 TLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
.+|..++++|++|-++++++..
T Consensus 4 a~a~~~a~~g~~vllv~~Dp~~ 25 (284)
T TIGR00345 4 ATAIRLAEQGKKVLLVSTDPAH 25 (284)
T ss_pred HHHHHHHHCCCeEEEEECCCCC
Confidence 6889999999999999986543
No 221
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=29.62 E-value=94 Score=28.70 Aligned_cols=39 Identities=21% Similarity=0.065 Sum_probs=26.9
Q ss_pred HHHHHhcCCCCCcEEEECCC-----c-chhHHHHHHcCCCeEEEccc
Q 044936 78 FRRLLMTPGRLPTCIISDSI-----M-SFTIDVAEELNIPIITFRPY 118 (455)
Q Consensus 78 l~~ll~~~~~~~D~II~D~~-----~-~~~~~lA~~lgIP~v~~~~~ 118 (455)
+.+.++.. .||+|++--- . .-+..+|+.||+|++.+...
T Consensus 104 La~ai~~~--~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 104 LAAAAQKA--GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHHHHHh--CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 34444444 6999996443 2 25778999999999986553
No 222
>COG3245 CycB Cytochrome c5 [Energy production and conversion]
Probab=29.41 E-value=53 Score=25.96 Aligned_cols=48 Identities=8% Similarity=0.165 Sum_probs=36.7
Q ss_pred HHhCCceeecCCcchHHHHHHHhhhhceeeeecC---------------CCCCHHHHHHHHHHHH
Q 044936 360 MVAGVPMICWPQIGDQQVNSRCVSEIWKIGLDMK---------------DTCDRSTIENLVRDLM 409 (455)
Q Consensus 360 l~~GvP~l~~P~~~dq~~na~~~~~~~g~g~~~~---------------~~~~~~~l~~~i~~~l 409 (455)
++|+.++.+.|..+|.-.|+-|+.+ |.-..++ -..+.|++..+|+-+.
T Consensus 60 ~CHa~~~~GAPk~GdkAaW~PRiaq--G~dtL~~hai~GfnAMPpkG~ca~cSdDe~kAaId~M~ 122 (126)
T COG3245 60 ACHAAGLPGAPKTGDKAAWAPRIAQ--GKDTLLDHAINGFNAMPPKGGCADCSDDEVKAAIDFMA 122 (126)
T ss_pred HhccCCCCCCCCCCchhhhhhHHHh--chHHHHHHHhccccCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 6788899999999999999999965 5444331 1577888888886554
No 223
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=29.39 E-value=1.2e+02 Score=30.25 Aligned_cols=25 Identities=24% Similarity=0.250 Sum_probs=18.8
Q ss_pred chhHHHHHHcCCCeEEEcccchHHH
Q 044936 99 SFTIDVAEELNIPIITFRPYSAHCS 123 (455)
Q Consensus 99 ~~~~~lA~~lgIP~v~~~~~~~~~~ 123 (455)
....++|+.+|+|++.+.-......
T Consensus 101 gSTA~lAk~l~~PVvLVid~~~~s~ 125 (451)
T COG1797 101 GSTADLAKLLGAPVVLVVDASGLSR 125 (451)
T ss_pred CCHHHHHHHhCCCEEEEEeCcchhH
Confidence 3578899999999998766544443
No 224
>COG4081 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.32 E-value=40 Score=27.11 Aligned_cols=23 Identities=30% Similarity=0.400 Sum_probs=18.9
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
|-++..|.++|++||++.++...
T Consensus 22 iYls~klkkkgf~v~VaateAa~ 44 (148)
T COG4081 22 IYLSHKLKKKGFDVTVAATEAAL 44 (148)
T ss_pred HHHHHHhhccCccEEEecCHhhh
Confidence 45778999999999999987643
No 225
>PRK09620 hypothetical protein; Provisional
Probab=29.13 E-value=55 Score=29.64 Aligned_cols=20 Identities=20% Similarity=0.248 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 044936 2 LTLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~ 21 (455)
..||++|.++|++|+++...
T Consensus 33 s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 33 RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHCCCeEEEEeCC
Confidence 36899999999999999753
No 226
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=28.29 E-value=2.2e+02 Score=27.92 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=28.2
Q ss_pred hHHHHHHHHhcCCCCCcEEEE--CCCcc-hhHHHHHHcCCCeEEE
Q 044936 74 SKLAFRRLLMTPGRLPTCIIS--DSIMS-FTIDVAEELNIPIITF 115 (455)
Q Consensus 74 ~~~~l~~ll~~~~~~~D~II~--D~~~~-~~~~lA~~lgIP~v~~ 115 (455)
+-..+.+++.+. +||+|++ |.... ++..+|.+.+||+.-+
T Consensus 80 ~i~~~~~vl~~~--kPD~VlVhGDT~t~lA~alaa~~~~IpV~Hv 122 (383)
T COG0381 80 IIEGLSKVLEEE--KPDLVLVHGDTNTTLAGALAAFYLKIPVGHV 122 (383)
T ss_pred HHHHHHHHHHhh--CCCEEEEeCCcchHHHHHHHHHHhCCceEEE
Confidence 345667777766 8999884 55443 5567788899998854
No 227
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=28.13 E-value=77 Score=27.89 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=24.4
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccc
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~ 119 (455)
.||+|| +|+... -+..=|.++|||++.+.-+.
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~DTn 141 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCDTD 141 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEeeCC
Confidence 588765 788664 67777999999999875544
No 228
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=28.10 E-value=79 Score=26.94 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=17.2
Q ss_pred hhceeeeecCCCCCHHHHHHHHHHHHhH
Q 044936 384 EIWKIGLDMKDTCDRSTIENLVRDLMDN 411 (455)
Q Consensus 384 ~~~g~g~~~~~~~~~~~l~~~i~~~l~~ 411 (455)
+..|+|+.+ |+|+|.++|.+++++
T Consensus 109 ~~cGVGV~V----T~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 109 KACGVGVVV----TPEQIEAAVEKYIEE 132 (164)
T ss_dssp HTTTTT--------HHHHHHHHHHHHHH
T ss_pred HHcCCCeEE----CHHHHHHHHHHHHHH
Confidence 447899876 999999999999984
No 229
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=27.99 E-value=1.1e+02 Score=29.17 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=50.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHH
Q 044936 278 LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTL 357 (455)
Q Consensus 278 ~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~ 357 (455)
.+.+..+++.+++.....+.||..++. . .-.++.++++...+-.||++ ||=..-..+++
T Consensus 50 ~~~~Ra~dL~~a~~Dp~i~aI~~~rGG-------~------------g~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~ 108 (308)
T cd07062 50 SPEERAEELMAAFADPSIKAIIPTIGG-------D------------DSNELLPYLDYELIKKNPKI--FIGYSDITALH 108 (308)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEECCcc-------c------------CHhhhhhhcCHHHHhhCCCE--EEeccHHHHHH
Confidence 456779999999999999999988632 1 12234556666666667766 77777777777
Q ss_pred HHHH--hCCceeecCCc
Q 044936 358 ESMV--AGVPMICWPQI 372 (455)
Q Consensus 358 eal~--~GvP~l~~P~~ 372 (455)
-+++ .|++.+--|+.
T Consensus 109 ~al~~~~g~~t~hGp~~ 125 (308)
T cd07062 109 LAIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHHhcCCeEEECccc
Confidence 7764 36776666654
No 230
>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=27.60 E-value=1.6e+02 Score=26.38 Aligned_cols=23 Identities=39% Similarity=0.470 Sum_probs=18.0
Q ss_pred HHHHHHHhCCCEEEEEeCCcchh
Q 044936 3 TLAELFSHAGFRVTFVNTEQYHD 25 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~~~ 25 (455)
+++-.+...||+||.++++....
T Consensus 47 r~~YG~L~~g~~v~yvsTe~T~r 69 (235)
T COG2874 47 RFAYGFLMNGYRVTYVSTELTVR 69 (235)
T ss_pred HHHHHHHhCCceEEEEEechhHH
Confidence 56667778999999999876543
No 231
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=27.51 E-value=2.1e+02 Score=27.61 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHHH
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRRL 81 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (455)
+.|++.|.++||++++++........... ...++.+..++.. ....+ ..+ ..+..+
T Consensus 21 ~~l~~~l~~~~~~~~v~~~~~~~~~~~~~--------~~~~i~~~~~~~~-------~~~~~-~~~--------~~l~~~ 76 (374)
T TIGR03088 21 VNLINHLPADRYRHAVVALTEVSAFRKRI--------QRPDVAFYALHKQ-------PGKDV-AVY--------PQLYRL 76 (374)
T ss_pred HHHHhhccccccceEEEEcCCCChhHHHH--------HhcCceEEEeCCC-------CCCCh-HHH--------HHHHHH
Confidence 57899999999999888743211111000 0115666665421 00111 111 123344
Q ss_pred HhcCCCCCcEEEECCCcc-hhHHHHHHcCCCeE
Q 044936 82 LMTPGRLPTCIISDSIMS-FTIDVAEELNIPII 113 (455)
Q Consensus 82 l~~~~~~~D~II~D~~~~-~~~~lA~~lgIP~v 113 (455)
++.. +||+|-+..... ++..++...++|..
T Consensus 77 l~~~--~~Divh~~~~~~~~~~~~~~~~~~~~~ 107 (374)
T TIGR03088 77 LRQL--RPDIVHTRNLAALEAQLPAALAGVPAR 107 (374)
T ss_pred HHHh--CCCEEEEcchhHHHHHHHHHhcCCCeE
Confidence 4444 899988654332 34455667788854
No 232
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=27.39 E-value=2.2e+02 Score=27.94 Aligned_cols=86 Identities=12% Similarity=0.089 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCC-C----CCCCCCCChhhhhhcCCCe--eEEeccCHH---HHhhcccccce
Q 044936 278 LGREQILEFWHGMVNSGKRFLWVIRSDLID-G----EPGVGPVPVELDQGTKERG--CIVSWAPQE---EVLAHQAIGGF 347 (455)
Q Consensus 278 ~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~--~~~~~~p~~---~ll~~~~~~~~ 347 (455)
++...+..+++++...+.++...+...... + .|....-+.+. ...+++ .+++++||. .+|-.|++ =
T Consensus 192 Ye~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~--~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--N 267 (374)
T PF10093_consen 192 YENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGDS--WQRGNLTLHVLPFVPQDDYDRLLWACDF--N 267 (374)
T ss_pred CCchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCccc--cccCCeEEEECCCCCHHHHHHHHHhCcc--c
Confidence 466668888888888877766555322110 0 00000000000 012444 455999995 48888886 2
Q ss_pred eeecCchhHHHHHHhCCceee
Q 044936 348 LTHSGWNSTLESMVAGVPMIC 368 (455)
Q Consensus 348 i~hgG~~s~~eal~~GvP~l~ 368 (455)
+-. |=-|...|..+|+|.|=
T Consensus 268 fVR-GEDSfVRAqwAgkPFvW 287 (374)
T PF10093_consen 268 FVR-GEDSFVRAQWAGKPFVW 287 (374)
T ss_pred eEe-cchHHHHHHHhCCCceE
Confidence 323 55699999999999873
No 233
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=27.09 E-value=1.5e+02 Score=25.25 Aligned_cols=29 Identities=10% Similarity=0.228 Sum_probs=20.9
Q ss_pred CcEEEEeecCcccCCHHHHHHHHHHHHhC
Q 044936 265 GTVLYVSFGSFIKLGREQILEFWHGMVNS 293 (455)
Q Consensus 265 ~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~ 293 (455)
...+|+++||....+.+.++..++.|...
T Consensus 7 ~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 7 SALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 34699999998855556677777777664
No 234
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=27.03 E-value=1.7e+02 Score=25.63 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=22.9
Q ss_pred CCcEEEE-CCCc-chhHHHHHHcCCCeEEEcc
Q 044936 88 LPTCIIS-DSIM-SFTIDVAEELNIPIITFRP 117 (455)
Q Consensus 88 ~~D~II~-D~~~-~~~~~lA~~lgIP~v~~~~ 117 (455)
++|+|+. +.-. +.|..+|..+|+|+++..-
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK 81 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAKK 81 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 7899983 3333 4788899999999998643
No 235
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=26.67 E-value=84 Score=27.87 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=24.4
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccc
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~ 119 (455)
.||+|| +|+..- -+..=|.++|||++.+.-+.
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivDTn 147 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCDTD 147 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEeCC
Confidence 588765 788654 66677899999999976544
No 236
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=26.50 E-value=66 Score=28.30 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=19.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCcch
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
+.|.++|.++||+|+++.++...
T Consensus 23 ~~lir~L~k~G~~V~vv~T~aA~ 45 (196)
T PRK08305 23 MPEIEKLVDEGAEVTPIVSYTVQ 45 (196)
T ss_pred HHHHHHHHhCcCEEEEEECHhHH
Confidence 57899999999999999986543
No 237
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=26.40 E-value=1.5e+02 Score=29.50 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCCCcEEEECCCcc-------hh---HHHHHHcCCCeEEEc
Q 044936 75 KLAFRRLLMTPGRLPTCIISDSIMS-------FT---IDVAEELNIPIITFR 116 (455)
Q Consensus 75 ~~~l~~ll~~~~~~~D~II~D~~~~-------~~---~~lA~~lgIP~v~~~ 116 (455)
...+.++++.. +||++|+-|.+. |+ ..+.+++|||.+.-.
T Consensus 65 ~~~i~~mv~k~--~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~M 114 (431)
T TIGR01918 65 VARVLEMLKDK--EPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSM 114 (431)
T ss_pred HHHHHHHHHhc--CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 34555666666 899999999753 22 224567999999743
No 238
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=26.37 E-value=1.4e+02 Score=29.51 Aligned_cols=40 Identities=20% Similarity=0.213 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCCCCcEEEECCCcc-------hh---HHHHHHcCCCeEEEc
Q 044936 75 KLAFRRLLMTPGRLPTCIISDSIMS-------FT---IDVAEELNIPIITFR 116 (455)
Q Consensus 75 ~~~l~~ll~~~~~~~D~II~D~~~~-------~~---~~lA~~lgIP~v~~~ 116 (455)
...+.++++.. +||++|+-|.+. |+ ..+.+++|||.+.-.
T Consensus 65 ~~~i~~mv~k~--~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaM 114 (431)
T TIGR01917 65 KAKVLEMIKGA--NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAM 114 (431)
T ss_pred HHHHHHHHHhc--CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 34555666666 899999999753 22 224567999999743
No 239
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=26.25 E-value=66 Score=29.09 Aligned_cols=19 Identities=47% Similarity=0.571 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCEEEEEeC
Q 044936 2 LTLAELFSHAGFRVTFVNT 20 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~ 20 (455)
.+||+.|.++||+|+++..
T Consensus 30 ~aLA~~L~~~G~~V~li~r 48 (229)
T PRK06732 30 KIIAETFLAAGHEVTLVTT 48 (229)
T ss_pred HHHHHHHHhCCCEEEEEEC
Confidence 3689999999999999974
No 240
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=25.99 E-value=87 Score=20.05 Aligned_cols=26 Identities=12% Similarity=0.224 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 044936 397 DRSTIENLVRDLMDNKRDEIMESTVKI 423 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~~~~~~~~~a~~~ 423 (455)
+.++|..||..+.++. .++++.|+..
T Consensus 1 tee~l~~Ai~~v~~g~-~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK-MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS-S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC-CCHHHHHHHH
Confidence 4688999998888743 6777777664
No 241
>PRK03094 hypothetical protein; Provisional
Probab=25.99 E-value=68 Score=23.60 Aligned_cols=21 Identities=14% Similarity=0.423 Sum_probs=16.8
Q ss_pred CHHHHHHHHhCCCEEEEEeCC
Q 044936 1 MLTLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~ 21 (455)
|-.+.+.|.++||+|.=+..+
T Consensus 10 Ls~i~~~L~~~GYeVv~l~~~ 30 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLRSE 30 (80)
T ss_pred cHHHHHHHHHCCCEEEecCcc
Confidence 346889999999999877553
No 242
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=25.89 E-value=1e+02 Score=28.57 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=23.6
Q ss_pred cEEEEeecCcccCCHH-HHHHHHHHHHh--CCCcEEEEEeC
Q 044936 266 TVLYVSFGSFIKLGRE-QILEFWHGMVN--SGKRFLWVIRS 303 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~-~~~~~~~~l~~--~~~~~iw~~~~ 303 (455)
.++.|||||......+ .+..+.+.+++ .+..|-|++.+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 4789999998765444 67777777766 37788898743
No 243
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=25.72 E-value=1.2e+02 Score=26.10 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=25.2
Q ss_pred HHHHHHHhcCCCCCcEEEECCCcch--hHHHHHHcCCCeEEEc
Q 044936 76 LAFRRLLMTPGRLPTCIISDSIMSF--TIDVAEELNIPIITFR 116 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~~~~--~~~lA~~lgIP~v~~~ 116 (455)
+.++.+++. +||+||....... ....-+..|||++.+.
T Consensus 60 ~n~E~ll~l---~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 60 LNVELIVAL---KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCHHHHhcc---CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 455666554 8999998654332 3344578999998764
No 244
>PHA02754 hypothetical protein; Provisional
Probab=25.46 E-value=1.5e+02 Score=20.11 Aligned_cols=23 Identities=9% Similarity=0.205 Sum_probs=17.8
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 406 RDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 406 ~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
.+.+.+ ..|++..+++++.+.++
T Consensus 8 ~k~i~e--K~Fke~MRelkD~LSe~ 30 (67)
T PHA02754 8 PKAIME--KDFKEAMRELKDILSEA 30 (67)
T ss_pred HHHHHH--hHHHHHHHHHHHHHhhC
Confidence 344455 78999999999998876
No 245
>PF10163 EnY2: Transcription factor e(y)2; InterPro: IPR018783 Enhancer of yellow 2 (EnY2) is a small transcription factor which is combined in a complex with the TAFII40 protein []. This protein is conserved from protozoa to humans.; PDB: 4DHX_C 3FWC_P 3M99_C 3KIK_A 3KJL_C 3FWB_C 3MHS_B 3MHH_B.
Probab=25.44 E-value=1.1e+02 Score=22.85 Aligned_cols=51 Identities=18% Similarity=0.315 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhhc
Q 044936 397 DRSTIENLVRDLMDNKRDEIMESTVKIAKMARDAVKEGGSSYRNLEKLIEDIRSMA 452 (455)
Q Consensus 397 ~~~~l~~~i~~~l~~~~~~~~~~a~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~ 452 (455)
..+.|.+.+++-|.+ ...+...+.+.+. .++.+|....+++++++++...+
T Consensus 15 e~~~L~~~L~~rL~e--~GW~d~vr~~~re---~i~~~g~~~~~~~~l~~~i~P~A 65 (86)
T PF10163_consen 15 EYERLKELLRQRLIE--CGWRDEVRQLCRE---IIRERGIDNLTFEDLLEEITPKA 65 (86)
T ss_dssp HHHHHHHHHHHHHHH--TTHHHHHHHHHHH---HHHHH-TTTSBHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH--CChHHHHHHHHHH---HHHhhCCCCCCHHHHHHHHHHHH
Confidence 446777777777765 4566665544443 33335565667888888887654
No 246
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.06 E-value=66 Score=25.50 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=16.4
Q ss_pred CHHHHHHHHhCCCEEEEEeC
Q 044936 1 MLTLAELFSHAGFRVTFVNT 20 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~ 20 (455)
++.+|++|+++|++|+..--
T Consensus 25 ~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 25 FLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred HHHHHHHHHHcCCcEEEEec
Confidence 46799999999988877643
No 247
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=25.00 E-value=63 Score=27.11 Aligned_cols=21 Identities=29% Similarity=0.472 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
.++|..|+++||+|++.+.+.
T Consensus 12 ~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 12 TALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp HHHHHHHHHCTEEEEEETSCH
T ss_pred HHHHHHHHHcCCEEEEEeccH
Confidence 368999999999999999864
No 248
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=24.97 E-value=1.1e+02 Score=27.24 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCCCcEEEECCCcc-------hhHHHHHHcCCCeEEE
Q 044936 75 KLAFRRLLMTPGRLPTCIISDSIMS-------FTIDVAEELNIPIITF 115 (455)
Q Consensus 75 ~~~l~~ll~~~~~~~D~II~D~~~~-------~~~~lA~~lgIP~v~~ 115 (455)
.+.+.++++....++|+|++|..-. .|..++-.+++|.|.+
T Consensus 76 ~P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGV 123 (206)
T PF04493_consen 76 LPCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGV 123 (206)
T ss_dssp HHHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEE
T ss_pred HHHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEE
Confidence 4566666776555899999998642 3445666778888874
No 249
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=24.78 E-value=2.7e+02 Score=24.32 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=41.7
Q ss_pred ecCCcchHHHHHHHhhhhceeeeecC-------------CCCCHHHHH----HHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 044936 368 CWPQIGDQQVNSRCVSEIWKIGLDMK-------------DTCDRSTIE----NLVRDLMDNKRDEIMESTVKIAKMARDA 430 (455)
Q Consensus 368 ~~P~~~dq~~na~~~~~~~g~g~~~~-------------~~~~~~~l~----~~i~~~l~~~~~~~~~~a~~~~~~~~~~ 430 (455)
++|.+.||...-..+-+...+|+.-. ..+..+.++ +-|.++|.| +.+-+|-+++...+.+|
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d--~~IIRnr~KI~Avi~NA 99 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQD--AGIIRHRGKIQAIIGNA 99 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcC--chhHHhHHHHHHHHHHH
Confidence 45568888887765556566776431 256666664 556777776 44444444444444333
Q ss_pred ------HHcCCChHHHHHHH
Q 044936 431 ------VKEGGSSYRNLEKL 444 (455)
Q Consensus 431 ------~~~gg~~~~~~~~~ 444 (455)
.+++||=...+..+
T Consensus 100 ~~~l~i~~e~gSf~~ylW~f 119 (187)
T PRK10353 100 RAYLQMEQNGEPFADFVWSF 119 (187)
T ss_pred HHHHHHHHhcCCHHHHHhhc
Confidence 23466544445444
No 250
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=24.70 E-value=3.5e+02 Score=27.67 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=83.7
Q ss_pred EEEEeecCccc--CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChh---hhhhcCCCeeEEeccCH---HHH
Q 044936 267 VLYVSFGSFIK--LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVE---LDQGTKERGCIVSWAPQ---EEV 338 (455)
Q Consensus 267 vv~vs~Gs~~~--~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~---~~l 338 (455)
.-|+++-|... ...+.+.+.+.-+.+.+.+++..-.++ -.+.+. +.++.+.++.+.-|.+. ..+
T Consensus 294 ~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd--------~~le~~~~~la~~~~~~~~~~i~~~~~la~~i 365 (487)
T COG0297 294 GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGD--------PELEEALRALASRHPGRVLVVIGYDEPLAHLI 365 (487)
T ss_pred CcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCc--------HHHHHHHHHHHHhcCceEEEEeeecHHHHHHH
Confidence 34555555432 233555555555555566655432211 012222 23456677777766554 346
Q ss_pred hhcccccceee-----ecCchhHHHHHHhCCceeecCCc--chHHHHHH--HhhhhceeeeecCCCCCHHHHHHHHHHHH
Q 044936 339 LAHQAIGGFLT-----HSGWNSTLESMVAGVPMICWPQI--GDQQVNSR--CVSEIWKIGLDMKDTCDRSTIENLVRDLM 409 (455)
Q Consensus 339 l~~~~~~~~i~-----hgG~~s~~eal~~GvP~l~~P~~--~dq~~na~--~~~~~~g~g~~~~~~~~~~~l~~~i~~~l 409 (455)
++-+++ |+- -||. |-++||.+|.+-|+.+.. .|-..... .... -|.|..+... +++.+..++.+.+
T Consensus 366 ~agaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~-~gtGf~f~~~-~~~~l~~al~rA~ 440 (487)
T COG0297 366 YAGADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQG-VGTGFLFLQT-NPDHLANALRRAL 440 (487)
T ss_pred HhcCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchhccC-ceeEEEEecC-CHHHHHHHHHHHH
Confidence 666665 654 4775 678999999988887762 33222111 0223 4888888544 9999999999776
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHH
Q 044936 410 DNKRDEIMESTVKIAKMARDAVK 432 (455)
Q Consensus 410 ~~~~~~~~~~a~~~~~~~~~~~~ 432 (455)
. -|+..-..++...+.+++
T Consensus 441 ~----~y~~~~~~w~~~~~~~m~ 459 (487)
T COG0297 441 V----LYRAPPLLWRKVQPNAMG 459 (487)
T ss_pred H----HhhCCHHHHHHHHHhhcc
Confidence 6 233333334444455543
No 251
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=24.59 E-value=4.4e+02 Score=25.30 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=17.1
Q ss_pred HHHHHHHhCCCEEEEEeCCcch
Q 044936 3 TLAELFSHAGFRVTFVNTEQYH 24 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~~ 24 (455)
++|-.|++.|.+|-++++++.+
T Consensus 21 A~A~~lA~~g~kvLlvStDPAh 42 (322)
T COG0003 21 ATAVKLAESGKKVLLVSTDPAH 42 (322)
T ss_pred HHHHHHHHcCCcEEEEEeCCCC
Confidence 4678899999988888776644
No 252
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=23.82 E-value=78 Score=23.33 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=17.4
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
-.+.+.|.++||+|+=+....
T Consensus 11 s~v~~~L~~~GyeVv~l~~~~ 31 (80)
T PF03698_consen 11 SNVKEALREKGYEVVDLENEQ 31 (80)
T ss_pred hHHHHHHHHCCCEEEecCCcc
Confidence 468899999999999887654
No 253
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=23.70 E-value=3.6e+02 Score=24.83 Aligned_cols=20 Identities=25% Similarity=0.449 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 044936 2 LTLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~ 21 (455)
+.||..|++.|++|-++-..
T Consensus 122 ~nLA~~la~~g~~VllID~D 141 (274)
T TIGR03029 122 ANLAIVFSQLGEKTLLIDAN 141 (274)
T ss_pred HHHHHHHHhcCCeEEEEeCC
Confidence 46899999999999998653
No 254
>TIGR00355 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase. Involved in purine ribonucleotide biosynthesis. The IMP cyclohydrolase activity is in the N-terminal region.
Probab=23.40 E-value=1.6e+02 Score=30.04 Aligned_cols=84 Identities=10% Similarity=-0.041 Sum_probs=44.9
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC--CCCCCCCCCCccCH-HHHHH-hHhhhhHH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP--DGLPPDNPRFGIYI-KDWFC-SDKPVSKL 76 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~l~~~~~~~~~~~-~~~~~-~~~~~~~~ 76 (455)
++.||+.|.+.|+++. +|....+.+.+. +|.+..+. .+.|+.-..+-+-+ +.... .+.+.-.+
T Consensus 13 iv~lAk~L~~lGfeIi--ATgGTak~L~e~-----------GI~v~~Vsk~TgfPEil~GRVKTLHP~IhgGiLarr~~~ 79 (511)
T TIGR00355 13 IVEFAQGLVERGVELL--STGGTAKLLAEA-----------GVPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILARRGDD 79 (511)
T ss_pred HHHHHHHHHHCCCEEE--EechHHHHHHHC-----------CCeEEEeecccCCchhhCCccccCCchhhhhhhcCCCch
Confidence 4689999999999983 454566666665 56666664 35555311111111 11111 12222223
Q ss_pred HHHHHHhcCCCCCcEEEECCC
Q 044936 77 AFRRLLMTPGRLPTCIISDSI 97 (455)
Q Consensus 77 ~l~~ll~~~~~~~D~II~D~~ 97 (455)
.++++-+..=...|+||++.+
T Consensus 80 ~~~~l~~~~I~~IDlVvvNLY 100 (511)
T TIGR00355 80 DDADLEEHGIEPIDLVVVNLY 100 (511)
T ss_pred HHHHHHHcCCCceeEEEEecc
Confidence 344443331128999999874
No 255
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=23.38 E-value=1.6e+02 Score=24.91 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=22.2
Q ss_pred ccceeeecCc------hhHHHHHHhCCceeecC
Q 044936 344 IGGFLTHSGW------NSTLESMVAGVPMICWP 370 (455)
Q Consensus 344 ~~~~i~hgG~------~s~~eal~~GvP~l~~P 370 (455)
.+++++|+|- +.+.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4458888884 47889999999999985
No 256
>TIGR00313 cobQ cobyric acid synthase CobQ.
Probab=23.16 E-value=4.4e+02 Score=26.87 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=23.3
Q ss_pred CCcEEEECCCcc-----------hhHHHHHHcCCCeEEEcc
Q 044936 88 LPTCIISDSIMS-----------FTIDVAEELNIPIITFRP 117 (455)
Q Consensus 88 ~~D~II~D~~~~-----------~~~~lA~~lgIP~v~~~~ 117 (455)
++|+||+|.... ....+|+.++.|++.+.-
T Consensus 122 ~~D~vIIEGaGGl~~~~~~~~d~s~~~lA~~l~apVILV~d 162 (475)
T TIGR00313 122 EYDYVVIEGAGSPAEINLLKRDLANMRIAELANADAILVAD 162 (475)
T ss_pred cCCEEEEECCCCccccccCcCCchHHHHHHHhCCCEEEEEe
Confidence 789999888542 236789999999998754
No 257
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=23.11 E-value=92 Score=26.59 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=15.3
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 044936 2 LTLAELFSHAGFRVTFVN 19 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t 19 (455)
+.+|++|.++|++|+++.
T Consensus 42 l~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 42 LVAARHLANRGYNVTVYL 59 (169)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 568999999999999954
No 258
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=23.07 E-value=76 Score=32.20 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~ 22 (455)
..||+++..+|++||+++.+.
T Consensus 286 ~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 286 FAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred HHHHHHHHHCCCcEEEEeCCc
Confidence 368999999999999998754
No 259
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=23.02 E-value=3.6e+02 Score=26.14 Aligned_cols=61 Identities=11% Similarity=0.033 Sum_probs=41.4
Q ss_pred eccCHHHHhhcccccceee------ecCchhHHHHHHhCCceee-cCCcchHHHHHHHhhhhceeeee
Q 044936 331 SWAPQEEVLAHQAIGGFLT------HSGWNSTLESMVAGVPMIC-WPQIGDQQVNSRCVSEIWKIGLD 391 (455)
Q Consensus 331 ~~~p~~~ll~~~~~~~~i~------hgG~~s~~eal~~GvP~l~-~P~~~dq~~na~~~~~~~g~g~~ 391 (455)
-|-...+++...++.++.+ +-+.--+.++|.+|+.+++ =|+..++-.-...++++.|+=+.
T Consensus 52 ~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~ 119 (343)
T TIGR01761 52 LYCEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYL 119 (343)
T ss_pred ccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4667788888888877764 2345678889999999999 78876555544444443344333
No 260
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=22.84 E-value=4.6e+02 Score=22.05 Aligned_cols=137 Identities=12% Similarity=0.201 Sum_probs=76.1
Q ss_pred EEEEeecCcccCCHHHHHHHHHHHHhCCCcE-EEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhccccc
Q 044936 267 VLYVSFGSFIKLGREQILEFWHGMVNSGKRF-LWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIG 345 (455)
Q Consensus 267 vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~ 345 (455)
.|-|-+||.. +-+.++..++.|+.+++.+ +++++.+ ..|+.+. .|+ .=.....++
T Consensus 4 ~V~IIMGS~S--D~~~mk~Aa~~L~~fgi~ye~~VvSAH---------RTPe~m~----------~ya---~~a~~~g~~ 59 (162)
T COG0041 4 KVGIIMGSKS--DWDTMKKAAEILEEFGVPYEVRVVSAH---------RTPEKMF----------EYA---EEAEERGVK 59 (162)
T ss_pred eEEEEecCcc--hHHHHHHHHHHHHHcCCCeEEEEEecc---------CCHHHHH----------HHH---HHHHHCCCe
Confidence 3677788876 4466788888999988876 3444432 2343221 111 111233455
Q ss_pred ceeeecCchhHH---HHHHhCCceeecCCcchH---HHHHHHhhhhceeee-----ecCCCCCHHHHHHHHHHHHh--Hh
Q 044936 346 GFLTHSGWNSTL---ESMVAGVPMICWPQIGDQ---QVNSRCVSEIWKIGL-----DMKDTCDRSTIENLVRDLMD--NK 412 (455)
Q Consensus 346 ~~i~hgG~~s~~---eal~~GvP~l~~P~~~dq---~~na~~~~~~~g~g~-----~~~~~~~~~~l~~~i~~~l~--~~ 412 (455)
.||.-.|.-.=+ =|...=+|+|++|.-... .+--..+++ +-.|+ .+.+..|+.-++- ++|. |
T Consensus 60 viIAgAGgAAHLPGmvAa~T~lPViGVPv~s~~L~GlDSL~SiVQ-MP~GvPVaTvaIg~a~NAallAa---~ILa~~d- 134 (162)
T COG0041 60 VIIAGAGGAAHLPGMVAAKTPLPVIGVPVQSKALSGLDSLLSIVQ-MPAGVPVATVAIGNAANAALLAA---QILAIKD- 134 (162)
T ss_pred EEEecCcchhhcchhhhhcCCCCeEeccCccccccchHHHHHHhc-CCCCCeeEEEeecchhhHHHHHH---HHHcCCC-
Confidence 577666632111 123347899999985322 122222222 22333 2223445555444 4444 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHc
Q 044936 413 RDEIMESTVKIAKMARDAVKE 433 (455)
Q Consensus 413 ~~~~~~~a~~~~~~~~~~~~~ 433 (455)
+.++++.+++++..++.+.+
T Consensus 135 -~~l~~kl~~~r~~~~~~V~~ 154 (162)
T COG0041 135 -PELAEKLAEFREAQTEEVLE 154 (162)
T ss_pred -HHHHHHHHHHHHHHHHHHHh
Confidence 89999999999998887653
No 261
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.54 E-value=2.1e+02 Score=21.67 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=24.7
Q ss_pred CCcEEE--ECCCc----chhHHHHHHcCCCeEEEcccchHHH
Q 044936 88 LPTCII--SDSIM----SFTIDVAEELNIPIITFRPYSAHCS 123 (455)
Q Consensus 88 ~~D~II--~D~~~----~~~~~lA~~lgIP~v~~~~~~~~~~ 123 (455)
++|+|| +|... ..+...|++.++|++.....+...+
T Consensus 48 ~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 48 KADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred CCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHHHH
Confidence 678876 55542 2345688999999999876555543
No 262
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=22.40 E-value=1.1e+02 Score=27.99 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=24.1
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccc
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~ 119 (455)
.||+|| +|+..- -+..=|.++|||+|.+.=+.
T Consensus 118 ~P~llIV~Dp~~d~qAI~EA~~lnIPvIal~DTd 151 (249)
T PTZ00254 118 EPRLLIVTDPRTDHQAIREASYVNIPVIALCDTD 151 (249)
T ss_pred CCCEEEEeCCCcchHHHHHHHHhCCCEEEEecCC
Confidence 578665 888654 56677899999999976543
No 263
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=22.35 E-value=58 Score=31.00 Aligned_cols=20 Identities=25% Similarity=0.496 Sum_probs=17.5
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 044936 2 LTLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~ 21 (455)
..|++.|.++||+|++++..
T Consensus 19 ~~l~~~L~~~g~~v~v~~~~ 38 (360)
T cd04951 19 VDLADQFVAKGHQVAIISLT 38 (360)
T ss_pred HHHHHhcccCCceEEEEEEe
Confidence 57899999999999999853
No 264
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=22.29 E-value=55 Score=32.31 Aligned_cols=26 Identities=23% Similarity=0.492 Sum_probs=22.0
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhh
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRL 27 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~ 27 (455)
+|.++..|+++| .|-+++.+....++
T Consensus 110 LLQva~~lA~~~-~vLYVsGEES~~Qi 135 (456)
T COG1066 110 LLQVAARLAKRG-KVLYVSGEESLQQI 135 (456)
T ss_pred HHHHHHHHHhcC-cEEEEeCCcCHHHH
Confidence 578999999999 99999998766554
No 265
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=21.96 E-value=96 Score=27.60 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=17.4
Q ss_pred HHHHHHHhCCCEEEEEeCCc
Q 044936 3 TLAELFSHAGFRVTFVNTEQ 22 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~ 22 (455)
.||++|++.||+|++.+...
T Consensus 15 alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 15 ALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred HHHHHHHhCCCeEEEecCCC
Confidence 68999999999999997644
No 266
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=21.90 E-value=2.4e+02 Score=28.93 Aligned_cols=84 Identities=10% Similarity=-0.005 Sum_probs=45.6
Q ss_pred CHHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCC--CCCCCCCCCCccCH-HHHHHh-Hh-hhhH
Q 044936 1 MLTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIP--DGLPPDNPRFGIYI-KDWFCS-DK-PVSK 75 (455)
Q Consensus 1 ~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~l~~~~~~~~~~~-~~~~~~-~~-~~~~ 75 (455)
++.||+.|.+.|+++. .|....+.+.+. ||.+..+. .+.|+.-..+-+-+ +..... +. +...
T Consensus 17 iv~lAk~L~~lGfeI~--AT~GTak~L~e~-----------GI~v~~V~k~TgfpEil~GRVKTLHP~IhgGiLa~r~~~ 83 (513)
T PRK00881 17 IVEFAKALVELGVEIL--STGGTAKLLAEA-----------GIPVTEVSDVTGFPEILDGRVKTLHPKIHGGILARRDNP 83 (513)
T ss_pred HHHHHHHHHHCCCEEE--EcchHHHHHHHC-----------CCeeEEeecccCCchhcCCccccCCchhhhhhccCCCCH
Confidence 4689999999999983 445666666665 56666554 24555311111111 111111 11 1234
Q ss_pred HHHHHHHhcCCCCCcEEEECCC
Q 044936 76 LAFRRLLMTPGRLPTCIISDSI 97 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~ 97 (455)
...+++-+..-.+.|+||++.+
T Consensus 84 ~h~~~l~~~~i~~IDlVvvNLY 105 (513)
T PRK00881 84 EHVAALEEHGIEPIDLVVVNLY 105 (513)
T ss_pred HHHHHHHHcCCCceeEEEEeCc
Confidence 4555554432228999998875
No 267
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=21.73 E-value=92 Score=29.15 Aligned_cols=39 Identities=13% Similarity=0.151 Sum_probs=30.5
Q ss_pred cCchhH--HHHHHhCCceeecCCcchHHHHHHHhhhhceee
Q 044936 351 SGWNST--LESMVAGVPMICWPQIGDQQVNSRCVSEIWKIG 389 (455)
Q Consensus 351 gG~~s~--~eal~~GvP~l~~P~~~dq~~na~~~~~~~g~g 389 (455)
||||++ .-|-.+||-++++-+...|..+++...+..|+.
T Consensus 81 CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 81 CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 788865 456667999999999999999997533436877
No 268
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=21.72 E-value=1.1e+02 Score=26.63 Aligned_cols=25 Identities=24% Similarity=0.413 Sum_probs=20.4
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhh
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYHDR 26 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~~~ 26 (455)
..|.++|.++|++|.++.++...+-
T Consensus 16 ~~lir~L~~~g~~V~vv~T~~A~~f 40 (181)
T TIGR00421 16 IRLLEVLKEAGVEVHLVISDWAKET 40 (181)
T ss_pred HHHHHHHHHCCCEEEEEECccHHHH
Confidence 4688999999999999999665443
No 269
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=21.67 E-value=2.4e+02 Score=25.86 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=18.6
Q ss_pred HHHHHHHHhCCCEEEEEeCCcc
Q 044936 2 LTLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
..+|..++++|++|-++..+..
T Consensus 18 ~~la~~~a~~g~~vLlvd~D~~ 39 (254)
T cd00550 18 AATAVRLAEQGKKVLLVSTDPA 39 (254)
T ss_pred HHHHHHHHHCCCCceEEeCCCc
Confidence 3688999999999999987664
No 270
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=21.39 E-value=88 Score=29.01 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=16.1
Q ss_pred HHHHHHHhCCCEEEEEeC
Q 044936 3 TLAELFSHAGFRVTFVNT 20 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~ 20 (455)
++|+.|++|||+|.++.=
T Consensus 21 ~~A~~lA~~g~~liLvaR 38 (265)
T COG0300 21 ELAKQLARRGYNLILVAR 38 (265)
T ss_pred HHHHHHHHCCCEEEEEeC
Confidence 689999999999999863
No 271
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=21.23 E-value=2.4e+02 Score=24.19 Aligned_cols=66 Identities=23% Similarity=0.207 Sum_probs=38.9
Q ss_pred CCcEEEEeecCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhccc
Q 044936 264 SGTVLYVSFGSFIKLGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQA 343 (455)
Q Consensus 264 ~~~vv~vs~Gs~~~~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~ 343 (455)
.+.+-.+.+|.+. +++++-+...|.+++..- ... -+.. ..... ...+.+-.++|+.++
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d-~~~---------~~~~---~~~~~--~~~~~~l~ell~~aD 93 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYD-RSP---------KPEE---GADEF--GVEYVSLDELLAQAD 93 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEE-SSC---------HHHH---HHHHT--TEEESSHHHHHHH-S
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEec-ccC---------Chhh---hcccc--cceeeehhhhcchhh
Confidence 5578889999877 566677777888876543 210 0110 00011 125667889999999
Q ss_pred ccceeeecCc
Q 044936 344 IGGFLTHSGW 353 (455)
Q Consensus 344 ~~~~i~hgG~ 353 (455)
+ ++.|+-.
T Consensus 94 i--v~~~~pl 101 (178)
T PF02826_consen 94 I--VSLHLPL 101 (178)
T ss_dssp E--EEE-SSS
T ss_pred h--hhhhhcc
Confidence 8 8888853
No 272
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=21.13 E-value=5.4e+02 Score=22.57 Aligned_cols=87 Identities=10% Similarity=0.008 Sum_probs=41.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhcCCCCCCCccCCCCCeEEEeCCCCCCCCCCCCccCHHHHHHhHhhhhHHHHHHH
Q 044936 2 LTLAELFSHAGFRVTFVNTEQYHDRLLGNTDVTGFYKRFPNFRFTSIPDGLPPDNPRFGIYIKDWFCSDKPVSKLAFRRL 81 (455)
Q Consensus 2 l~LA~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 81 (455)
+.+|-+.+.+|++|.++--=... ... +........+++.+.....++.... .+....... .+..-...++.
T Consensus 40 ~g~a~ra~g~G~~V~ivQFlKg~---~~~-GE~~~l~~l~~v~~~~~g~~~~~~~----~~~~e~~~~-~~~~~~~a~~~ 110 (191)
T PRK05986 40 FGMALRAVGHGKKVGVVQFIKGA---WST-GERNLLEFGGGVEFHVMGTGFTWET----QDRERDIAA-AREGWEEAKRM 110 (191)
T ss_pred HHHHHHHHHCCCeEEEEEEecCC---Ccc-CHHHHHhcCCCcEEEECCCCCcccC----CCcHHHHHH-HHHHHHHHHHH
Confidence 45677777889999887421110 000 0001112234788887765432211 111111111 11122223334
Q ss_pred HhcCCCCCcEEEECCCcc
Q 044936 82 LMTPGRLPTCIISDSIMS 99 (455)
Q Consensus 82 l~~~~~~~D~II~D~~~~ 99 (455)
+.+. ++|+||.|-...
T Consensus 111 l~~~--~ydlvVLDEi~~ 126 (191)
T PRK05986 111 LADE--SYDLVVLDELTY 126 (191)
T ss_pred HhCC--CCCEEEEehhhH
Confidence 4433 899999998643
No 273
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=21.02 E-value=96 Score=26.35 Aligned_cols=21 Identities=24% Similarity=0.232 Sum_probs=17.9
Q ss_pred HHHHHHHhCCCEEEEEeCCcc
Q 044936 3 TLAELFSHAGFRVTFVNTEQY 23 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~~~ 23 (455)
.|+++|.++||+|+.++-...
T Consensus 13 ~l~~~L~~~~~~V~~~~R~~~ 33 (183)
T PF13460_consen 13 ALAKQLLRRGHEVTALVRSPS 33 (183)
T ss_dssp HHHHHHHHTTSEEEEEESSGG
T ss_pred HHHHHHHHCCCEEEEEecCch
Confidence 588999999999999986543
No 274
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=20.95 E-value=1.4e+02 Score=28.04 Aligned_cols=74 Identities=12% Similarity=0.244 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCCCCCCChhhhhhcCCCeeEEeccCHHHHhhcccccceeeecCchhHH
Q 044936 278 LGREQILEFWHGMVNSGKRFLWVIRSDLIDGEPGVGPVPVELDQGTKERGCIVSWAPQEEVLAHQAIGGFLTHSGWNSTL 357 (455)
Q Consensus 278 ~~~~~~~~~~~~l~~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ll~~~~~~~~i~hgG~~s~~ 357 (455)
.+.++.+.+.+++.....+.||..++. . .-.++.++++...+-.+|.. ||-..-..+++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGG-------y------------g~~rlL~~ld~~~i~~~pK~--~iGySDiTaL~ 104 (284)
T PF02016_consen 46 SDEERAEDLNEAFADPEIDAIWCARGG-------Y------------GANRLLPYLDYDAIRKNPKI--FIGYSDITALH 104 (284)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEES--S-------S-------------GGGGGGGCHHHHHHHSG-E--EEE-GGGHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEeecc-------c------------cHHHHHhcccccccccCCCE--EEEecchHHHH
Confidence 356778999999999999999988632 1 22345677788888888888 98888888877
Q ss_pred HHHHh--CCceeecCCc
Q 044936 358 ESMVA--GVPMICWPQI 372 (455)
Q Consensus 358 eal~~--GvP~l~~P~~ 372 (455)
-+++. |++.+--|+.
T Consensus 105 ~al~~~~g~~t~hGp~~ 121 (284)
T PF02016_consen 105 NALYAKTGLVTFHGPML 121 (284)
T ss_dssp HHHHHHHTBEEEES--H
T ss_pred HHHHHhCCCeEEEcchh
Confidence 77654 7888888873
No 275
>PLN02293 adenine phosphoribosyltransferase
Probab=20.92 E-value=2.8e+02 Score=24.18 Aligned_cols=27 Identities=7% Similarity=0.032 Sum_probs=20.9
Q ss_pred CCcEEE-ECCCc-chhHHHHHHcCCCeEE
Q 044936 88 LPTCII-SDSIM-SFTIDVAEELNIPIIT 114 (455)
Q Consensus 88 ~~D~II-~D~~~-~~~~~lA~~lgIP~v~ 114 (455)
++|+|+ .+.-. ..|..+|..+|+|++.
T Consensus 62 ~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~ 90 (187)
T PLN02293 62 GISVVAGIEARGFIFGPPIALAIGAKFVP 90 (187)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHCCCEEE
Confidence 689888 44433 3788999999999875
No 276
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=20.88 E-value=1.1e+02 Score=27.37 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCCCCcEEEECCCcch---hHHHH----HHcCCCeEE
Q 044936 76 LAFRRLLMTPGRLPTCIISDSIMSF---TIDVA----EELNIPIIT 114 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II~D~~~~~---~~~lA----~~lgIP~v~ 114 (455)
+.+.+.+++....||+||+|..-.. ...+| -.+++|+|.
T Consensus 81 p~l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIG 126 (208)
T cd06559 81 PPLLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIG 126 (208)
T ss_pred HHHHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEE
Confidence 3356666664447999999987432 22333 345666665
No 277
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=20.74 E-value=1.4e+02 Score=26.97 Aligned_cols=33 Identities=21% Similarity=0.468 Sum_probs=24.7
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccch
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYSA 120 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~~ 120 (455)
.||+|| .|+.-. .+..=|.++|||++.+.=+..
T Consensus 155 ~Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~ 189 (225)
T TIGR01011 155 LPDLLFVIDPVKEKIAVAEARKLGIPVVAIVDTNC 189 (225)
T ss_pred CCCEEEEeCCCccHHHHHHHHHcCCCEEEEeeCCC
Confidence 789876 787643 667778999999998755443
No 278
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=20.73 E-value=76 Score=16.68 Aligned_cols=17 Identities=29% Similarity=0.950 Sum_probs=12.8
Q ss_pred ccccccccCCCCcEEEE
Q 044936 254 SCMTWLDSQPSGTVLYV 270 (455)
Q Consensus 254 ~~~~~l~~~~~~~vv~v 270 (455)
.|..|.+...+...+|.
T Consensus 4 kCiNWFE~~ge~r~lyL 20 (22)
T PF08452_consen 4 KCINWFESRGEERFLYL 20 (22)
T ss_pred EEeehhhhCCceeEEEE
Confidence 47789998877777765
No 279
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=20.63 E-value=1.3e+02 Score=27.75 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=24.4
Q ss_pred CCcEEE-ECCCcc-hhHHHHHHcCCCeEEEcccc
Q 044936 88 LPTCII-SDSIMS-FTIDVAEELNIPIITFRPYS 119 (455)
Q Consensus 88 ~~D~II-~D~~~~-~~~~lA~~lgIP~v~~~~~~ 119 (455)
.||+|| .|+..- .+..=|.++|||++.+.=+.
T Consensus 157 ~Pd~iii~d~~~~~~ai~Ea~kl~IPiIaivDTn 190 (258)
T PRK05299 157 LPDALFVVDPNKEHIAVKEARKLGIPVVAIVDTN 190 (258)
T ss_pred CCCEEEEeCCCccHHHHHHHHHhCCCEEEEeeCC
Confidence 789876 777654 66777899999999875544
No 280
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=20.36 E-value=1.6e+02 Score=27.00 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=28.7
Q ss_pred HHHHHHHhcCCCCCcEEE--ECCCcc----hhHHHHHHcCCCeEEEcc
Q 044936 76 LAFRRLLMTPGRLPTCII--SDSIMS----FTIDVAEELNIPIITFRP 117 (455)
Q Consensus 76 ~~l~~ll~~~~~~~D~II--~D~~~~----~~~~lA~~lgIP~v~~~~ 117 (455)
..+.+++.+. ++++|| +.||+. -+..+|+.+|||++-|-.
T Consensus 55 ~~l~~~l~~~--~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 55 EGLAAYLREE--GIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHHHC--CCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 4556666655 789988 666653 355678899999998744
No 281
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.34 E-value=3.3e+02 Score=24.84 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCCCcEEEECCCcc---hhHHHHHHcCCCeEE
Q 044936 75 KLAFRRLLMTPGRLPTCIISDSIMS---FTIDVAEELNIPIIT 114 (455)
Q Consensus 75 ~~~l~~ll~~~~~~~D~II~D~~~~---~~~~lA~~lgIP~v~ 114 (455)
...++.+++.++ +-++.+.|.-.. -+..+|+.+|||++.
T Consensus 137 ~~aM~~~m~~Lk-~r~l~flDs~T~a~S~a~~iAk~~gVp~~~ 178 (250)
T COG2861 137 EDAMEKLMEALK-ERGLYFLDSGTIANSLAGKIAKEIGVPVIK 178 (250)
T ss_pred HHHHHHHHHHHH-HCCeEEEcccccccchhhhhHhhcCCceee
Confidence 445566666544 568899998765 345789999999885
No 282
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=20.23 E-value=1.4e+02 Score=29.83 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=24.3
Q ss_pred HHHHhcCCCCCcEEEECCCcchhHHHHHHcCCCeEEEc
Q 044936 79 RRLLMTPGRLPTCIISDSIMSFTIDVAEELNIPIITFR 116 (455)
Q Consensus 79 ~~ll~~~~~~~D~II~D~~~~~~~~lA~~lgIP~v~~~ 116 (455)
++++++. +||++|.++. ...+|+++|+|.+.+.
T Consensus 363 ~~~i~~~--~pdliig~~~---~~~~a~~~gip~~~~~ 395 (430)
T cd01981 363 GDMIART--EPELIFGTQM---ERHIGKRLDIPCAVIS 395 (430)
T ss_pred HHHHHhh--CCCEEEecch---hhHHHHHcCCCEEEEe
Confidence 3444444 7999998884 5667999999998753
No 283
>PRK14098 glycogen synthase; Provisional
Probab=20.09 E-value=86 Score=32.09 Aligned_cols=19 Identities=11% Similarity=0.396 Sum_probs=17.3
Q ss_pred HHHHHHHhCCCEEEEEeCC
Q 044936 3 TLAELFSHAGFRVTFVNTE 21 (455)
Q Consensus 3 ~LA~~L~~rGh~Vt~~t~~ 21 (455)
.|.++|+++||+|.+++|.
T Consensus 30 ~Lp~al~~~g~~v~v~~P~ 48 (489)
T PRK14098 30 SFPQALEEEGFEARIMMPK 48 (489)
T ss_pred HHHHHHHHCCCeEEEEcCC
Confidence 6899999999999999983
No 284
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=20.04 E-value=94 Score=25.71 Aligned_cols=39 Identities=21% Similarity=0.277 Sum_probs=27.9
Q ss_pred cEEEEeecCcccCCHHHHHHHHHHHH-----hCCCcEEEEEeCC
Q 044936 266 TVLYVSFGSFIKLGREQILEFWHGMV-----NSGKRFLWVIRSD 304 (455)
Q Consensus 266 ~vv~vs~Gs~~~~~~~~~~~~~~~l~-----~~~~~~iw~~~~~ 304 (455)
.||+|+-|+-.+.....+..++.... .....|+|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999988766667777777766 2245799999753
Done!