Query 044941
Match_columns 202
No_of_seqs 163 out of 1224
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 14:27:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044941.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044941hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 99.7 1.7E-18 5.8E-23 153.5 7.4 144 19-188 138-292 (353)
2 3p9c_A Caffeic acid O-methyltr 99.5 8.7E-14 3E-18 123.7 9.9 112 77-202 203-321 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.4 2.7E-13 9.4E-18 120.4 9.6 112 77-202 205-323 (368)
4 3dp7_A SAM-dependent methyltra 99.4 7.6E-13 2.6E-17 117.1 8.8 101 77-187 181-295 (363)
5 3gwz_A MMCR; methyltransferase 99.4 8.4E-13 2.9E-17 117.0 8.0 102 77-188 204-316 (369)
6 3lst_A CALO1 methyltransferase 99.3 2E-12 6.7E-17 113.4 7.5 139 22-188 146-295 (348)
7 3i53_A O-methyltransferase; CO 99.3 2.8E-12 9.6E-17 111.2 7.6 139 22-185 131-280 (332)
8 3mcz_A O-methyltransferase; ad 99.3 4.4E-12 1.5E-16 110.4 6.5 109 65-187 173-295 (352)
9 2ip2_A Probable phenazine-spec 99.3 5.8E-12 2E-16 109.0 7.1 101 77-187 169-280 (334)
10 1zg3_A Isoflavanone 4'-O-methy 99.1 6.9E-11 2.4E-15 103.8 8.2 97 77-187 195-301 (358)
11 1fp2_A Isoflavone O-methyltran 99.1 1.4E-10 4.8E-15 101.6 8.7 93 77-187 190-296 (352)
12 1fp1_D Isoliquiritigenin 2'-O- 99.1 9.7E-11 3.3E-15 103.5 7.3 97 77-187 211-314 (372)
13 1x19_A CRTF-related protein; m 99.1 3.8E-10 1.3E-14 98.9 9.4 99 77-185 192-301 (359)
14 1tw3_A COMT, carminomycin 4-O- 99.0 1.2E-10 4.2E-15 101.5 5.2 100 77-186 185-296 (360)
15 1qzz_A RDMB, aclacinomycin-10- 99.0 1.4E-10 4.7E-15 101.5 4.9 100 77-186 184-296 (374)
16 2r3s_A Uncharacterized protein 99.0 4E-10 1.4E-14 96.8 5.7 101 77-187 167-279 (335)
17 4gek_A TRNA (CMO5U34)-methyltr 98.2 2.2E-06 7.7E-11 72.9 6.5 100 77-186 72-185 (261)
18 3dtn_A Putative methyltransfer 98.1 6.6E-06 2.3E-10 66.6 6.7 96 77-185 46-154 (234)
19 3hnr_A Probable methyltransfer 97.7 8.3E-05 2.8E-09 59.3 7.3 93 77-184 47-150 (220)
20 1kpg_A CFA synthase;, cyclopro 97.7 9.1E-05 3.1E-09 61.9 7.2 98 77-184 66-173 (287)
21 2qe6_A Uncharacterized protein 97.6 7.5E-05 2.6E-09 63.6 6.4 94 77-183 79-200 (274)
22 1xtp_A LMAJ004091AAA; SGPP, st 97.6 9.7E-05 3.3E-09 60.1 5.7 96 76-184 94-202 (254)
23 3ggd_A SAM-dependent methyltra 97.5 0.00013 4.5E-09 59.4 6.0 93 77-183 58-167 (245)
24 3jwh_A HEN1; methyltransferase 97.5 0.00025 8.6E-09 56.7 7.5 94 77-180 31-142 (217)
25 3hem_A Cyclopropane-fatty-acyl 97.5 0.00021 7.3E-09 60.4 7.3 98 77-184 74-188 (302)
26 2fk8_A Methoxy mycolic acid sy 97.5 0.00041 1.4E-08 58.9 8.5 99 76-184 91-199 (318)
27 3jwg_A HEN1, methyltransferase 97.4 0.00031 1.1E-08 56.1 7.1 94 77-180 31-142 (219)
28 3ocj_A Putative exported prote 97.4 9E-05 3.1E-09 63.0 4.1 97 77-183 120-231 (305)
29 3ou2_A SAM-dependent methyltra 97.4 0.00028 9.5E-09 55.7 6.6 91 77-182 48-149 (218)
30 3ujc_A Phosphoethanolamine N-m 97.4 0.00028 9.5E-09 57.5 6.4 95 77-184 57-164 (266)
31 2o57_A Putative sarcosine dime 97.3 0.00027 9.2E-09 59.2 5.3 98 77-186 84-194 (297)
32 3f4k_A Putative methyltransfer 97.3 0.00043 1.5E-08 56.4 6.3 95 77-184 48-155 (257)
33 2ex4_A Adrenal gland protein A 97.2 0.00023 7.8E-09 58.0 4.4 97 77-184 81-190 (241)
34 1ve3_A Hypothetical protein PH 97.2 0.00017 5.7E-09 57.5 3.5 93 77-181 40-144 (227)
35 3lcc_A Putative methyl chlorid 97.2 0.00012 4.2E-09 59.3 2.2 98 77-184 68-176 (235)
36 3g07_A 7SK snRNA methylphospha 97.2 0.0002 6.9E-09 60.9 3.3 54 121-178 154-219 (292)
37 1vl5_A Unknown conserved prote 97.2 0.00033 1.1E-08 57.6 4.4 95 77-184 39-145 (260)
38 3dlc_A Putative S-adenosyl-L-m 97.1 0.00024 8.1E-09 55.9 3.3 93 78-183 46-152 (219)
39 3bus_A REBM, methyltransferase 97.1 0.00066 2.3E-08 55.9 5.6 97 77-185 63-172 (273)
40 1nkv_A Hypothetical protein YJ 97.1 0.00041 1.4E-08 56.5 4.2 97 77-185 38-146 (256)
41 3mgg_A Methyltransferase; NYSG 97.1 0.00057 1.9E-08 56.5 4.9 91 77-180 39-143 (276)
42 3sm3_A SAM-dependent methyltra 97.0 0.00082 2.8E-08 53.5 5.6 100 76-183 31-145 (235)
43 2p7i_A Hypothetical protein; p 97.0 0.00045 1.5E-08 55.3 3.5 87 77-180 44-142 (250)
44 3h2b_A SAM-dependent methyltra 97.0 0.00066 2.3E-08 53.5 4.3 91 77-183 43-145 (203)
45 3dli_A Methyltransferase; PSI- 96.9 0.00063 2.1E-08 55.3 4.2 89 77-180 43-141 (240)
46 3gu3_A Methyltransferase; alph 96.9 0.00041 1.4E-08 58.3 3.1 91 77-181 24-128 (284)
47 3vc1_A Geranyl diphosphate 2-C 96.9 0.001 3.6E-08 56.5 5.4 97 76-185 118-227 (312)
48 4htf_A S-adenosylmethionine-de 96.9 0.00081 2.8E-08 56.1 4.4 93 76-180 69-174 (285)
49 1xxl_A YCGJ protein; structura 96.9 0.00046 1.6E-08 56.4 2.7 97 76-185 22-130 (239)
50 3g2m_A PCZA361.24; SAM-depende 96.8 0.0008 2.7E-08 56.7 4.1 98 77-181 84-192 (299)
51 3e23_A Uncharacterized protein 96.8 0.00098 3.4E-08 52.9 4.4 88 77-181 45-143 (211)
52 2xvm_A Tellurite resistance pr 96.8 0.00048 1.7E-08 53.6 2.4 98 77-185 34-142 (199)
53 3kkz_A Uncharacterized protein 96.8 0.0014 4.8E-08 54.1 5.3 96 76-185 47-156 (267)
54 3bkx_A SAM-dependent methyltra 96.8 0.0044 1.5E-07 51.0 8.3 97 77-185 45-165 (275)
55 3m70_A Tellurite resistance pr 96.8 0.0011 3.6E-08 55.4 4.5 97 76-184 121-228 (286)
56 3dh0_A SAM dependent methyltra 96.8 0.0011 3.9E-08 52.5 4.3 96 77-185 39-149 (219)
57 3ofk_A Nodulation protein S; N 96.8 0.00062 2.1E-08 54.1 2.7 90 77-179 53-154 (216)
58 3hm2_A Precorrin-6Y C5,15-meth 96.7 0.0034 1.1E-07 47.9 6.1 89 77-182 27-130 (178)
59 2pjd_A Ribosomal RNA small sub 96.6 0.0017 5.8E-08 56.6 4.7 95 77-181 198-305 (343)
60 3g5l_A Putative S-adenosylmeth 96.6 0.0012 4.1E-08 53.8 3.5 86 77-178 46-144 (253)
61 3bxo_A N,N-dimethyltransferase 96.6 0.0015 5E-08 52.4 3.7 92 77-184 42-146 (239)
62 3pfg_A N-methyltransferase; N, 96.5 0.0015 5.1E-08 53.7 3.2 92 77-183 52-155 (263)
63 1pjz_A Thiopurine S-methyltran 96.5 0.0036 1.2E-07 50.2 5.4 96 76-179 23-140 (203)
64 3uwp_A Histone-lysine N-methyl 96.4 0.0044 1.5E-07 57.2 6.4 100 77-187 175-296 (438)
65 3l8d_A Methyltransferase; stru 96.4 0.0029 9.8E-08 50.9 4.5 92 77-181 55-155 (242)
66 3e05_A Precorrin-6Y C5,15-meth 96.4 0.011 3.8E-07 46.6 7.7 89 77-181 42-144 (204)
67 3i9f_A Putative type 11 methyl 96.3 0.0015 5.1E-08 49.9 2.2 91 77-185 19-118 (170)
68 1ri5_A MRNA capping enzyme; me 96.3 0.0041 1.4E-07 51.4 4.9 93 77-179 66-174 (298)
69 3ege_A Putative methyltransfer 96.2 0.014 4.8E-07 48.1 7.7 89 77-181 36-132 (261)
70 3g5t_A Trans-aconitate 3-methy 96.1 0.0049 1.7E-07 51.8 4.7 91 77-179 38-149 (299)
71 3cgg_A SAM-dependent methyltra 96.0 0.0067 2.3E-07 46.4 4.3 88 77-180 48-148 (195)
72 2pxx_A Uncharacterized protein 95.9 0.0033 1.1E-07 49.2 2.5 100 77-181 44-161 (215)
73 3bkw_A MLL3908 protein, S-aden 95.9 0.0066 2.3E-07 48.6 4.3 87 77-179 45-144 (243)
74 2qm3_A Predicted methyltransfe 95.9 0.014 4.8E-07 51.4 6.7 92 77-182 174-280 (373)
75 1dus_A MJ0882; hypothetical pr 95.9 0.011 3.8E-07 45.1 5.2 94 77-181 54-159 (194)
76 2kw5_A SLR1183 protein; struct 95.9 0.023 7.8E-07 44.4 7.2 91 78-182 32-134 (202)
77 2p35_A Trans-aconitate 2-methy 95.9 0.0087 3E-07 48.5 4.8 86 77-180 35-133 (259)
78 3iv6_A Putative Zn-dependent a 95.8 0.019 6.4E-07 49.1 6.7 91 77-180 47-149 (261)
79 4hg2_A Methyltransferase type 95.7 0.0065 2.2E-07 51.3 3.4 92 75-183 39-139 (257)
80 3thr_A Glycine N-methyltransfe 95.7 0.004 1.4E-07 51.8 2.1 95 77-179 59-175 (293)
81 1y8c_A S-adenosylmethionine-de 95.6 0.0075 2.6E-07 48.1 3.5 90 77-177 39-140 (246)
82 2yqz_A Hypothetical protein TT 95.6 0.0058 2E-07 49.5 2.9 88 77-178 41-140 (263)
83 1wzn_A SAM-dependent methyltra 95.6 0.0065 2.2E-07 49.3 3.0 90 77-177 43-143 (252)
84 2gb4_A Thiopurine S-methyltran 95.5 0.0086 2.9E-07 50.3 3.5 98 76-181 69-193 (252)
85 3eey_A Putative rRNA methylase 95.5 0.025 8.4E-07 44.1 5.8 101 77-182 24-142 (197)
86 4dzr_A Protein-(glutamine-N5) 95.4 0.0079 2.7E-07 46.9 2.9 99 76-180 31-165 (215)
87 3ccf_A Cyclopropane-fatty-acyl 95.4 0.014 4.6E-07 48.5 4.4 84 77-180 59-155 (279)
88 1u2z_A Histone-lysine N-methyl 95.4 0.043 1.5E-06 50.3 8.0 97 76-185 243-365 (433)
89 4dcm_A Ribosomal RNA large sub 95.4 0.015 5.2E-07 51.7 4.8 96 77-179 224-334 (375)
90 4fsd_A Arsenic methyltransfera 95.3 0.014 4.8E-07 51.4 4.4 99 76-184 84-208 (383)
91 3b3j_A Histone-arginine methyl 95.2 0.0044 1.5E-07 57.1 0.9 90 77-177 160-261 (480)
92 3tfw_A Putative O-methyltransf 95.2 0.04 1.4E-06 45.4 6.6 91 77-182 65-173 (248)
93 3kr9_A SAM-dependent methyltra 95.1 0.029 9.8E-07 47.1 5.6 90 76-179 16-119 (225)
94 3d2l_A SAM-dependent methyltra 95.0 0.0094 3.2E-07 47.7 2.1 89 77-177 35-135 (243)
95 2y1w_A Histone-arginine methyl 94.9 0.0077 2.6E-07 52.6 1.6 91 77-177 52-153 (348)
96 3duw_A OMT, O-methyltransferas 94.9 0.042 1.4E-06 43.7 5.7 91 77-182 60-170 (223)
97 3mti_A RRNA methylase; SAM-dep 94.7 0.028 9.6E-07 43.4 4.2 102 76-182 23-138 (185)
98 1af7_A Chemotaxis receptor met 94.6 0.028 9.5E-07 48.2 4.3 49 121-177 194-250 (274)
99 2gpy_A O-methyltransferase; st 94.6 0.033 1.1E-06 44.9 4.4 90 77-181 56-162 (233)
100 3e8s_A Putative SAM dependent 94.5 0.007 2.4E-07 47.6 0.2 88 77-181 54-154 (227)
101 1zx0_A Guanidinoacetate N-meth 94.5 0.013 4.4E-07 47.5 1.7 95 76-180 61-171 (236)
102 3fpf_A Mtnas, putative unchara 94.4 0.056 1.9E-06 47.4 5.7 87 77-179 124-222 (298)
103 3mb5_A SAM-dependent methyltra 94.4 0.022 7.6E-07 46.3 3.0 87 77-180 95-195 (255)
104 1yzh_A TRNA (guanine-N(7)-)-me 94.4 0.032 1.1E-06 44.5 3.8 91 76-178 42-155 (214)
105 3lpm_A Putative methyltransfer 94.3 0.052 1.8E-06 44.8 5.1 101 76-178 50-175 (259)
106 3ntv_A MW1564 protein; rossman 94.3 0.021 7E-07 46.5 2.5 90 77-181 73-178 (232)
107 1l3i_A Precorrin-6Y methyltran 94.2 0.027 9.4E-07 42.8 3.1 89 77-180 35-135 (192)
108 3tr6_A O-methyltransferase; ce 94.2 0.034 1.2E-06 44.3 3.5 91 77-182 66-177 (225)
109 2gs9_A Hypothetical protein TT 94.1 0.04 1.4E-06 43.3 3.9 84 77-180 38-133 (211)
110 3lec_A NADB-rossmann superfami 94.1 0.06 2E-06 45.4 5.1 90 76-179 22-125 (230)
111 1vlm_A SAM-dependent methyltra 94.0 0.02 7E-07 45.7 2.0 84 77-180 49-140 (219)
112 3q87_B N6 adenine specific DNA 94.0 0.067 2.3E-06 41.4 4.9 88 77-182 25-126 (170)
113 1ixk_A Methyltransferase; open 93.8 0.096 3.3E-06 45.1 6.0 104 76-184 119-251 (315)
114 3r3h_A O-methyltransferase, SA 93.7 0.062 2.1E-06 44.4 4.5 90 77-181 62-172 (242)
115 3mq2_A 16S rRNA methyltransfer 93.7 0.071 2.4E-06 42.2 4.7 92 76-178 28-139 (218)
116 3gnl_A Uncharacterized protein 93.7 0.071 2.4E-06 45.3 4.9 90 76-179 22-125 (244)
117 3fzg_A 16S rRNA methylase; met 93.7 0.022 7.6E-07 47.5 1.6 98 76-185 50-160 (200)
118 3p9n_A Possible methyltransfer 93.6 0.19 6.6E-06 38.9 7.0 93 77-181 46-155 (189)
119 3cc8_A Putative methyltransfer 93.6 0.052 1.8E-06 42.6 3.7 90 77-180 34-131 (230)
120 3u81_A Catechol O-methyltransf 93.5 0.072 2.5E-06 42.6 4.4 94 77-183 60-174 (221)
121 3r0q_C Probable protein argini 93.4 0.044 1.5E-06 48.4 3.3 94 77-180 65-170 (376)
122 2hnk_A SAM-dependent O-methylt 93.4 0.043 1.5E-06 44.5 2.9 90 77-181 62-183 (239)
123 3njr_A Precorrin-6Y methylase; 93.3 0.17 6E-06 40.3 6.3 87 77-180 57-155 (204)
124 1nv8_A HEMK protein; class I a 93.3 0.18 6E-06 42.8 6.7 91 77-177 125-247 (284)
125 2b3t_A Protein methyltransfera 93.2 0.094 3.2E-06 43.6 4.9 99 77-178 111-237 (276)
126 1sui_A Caffeoyl-COA O-methyltr 93.2 0.12 4E-06 42.9 5.3 88 77-179 81-190 (247)
127 2b2c_A Spermidine synthase; be 93.2 0.049 1.7E-06 47.4 3.2 94 77-179 110-222 (314)
128 2ozv_A Hypothetical protein AT 93.1 0.067 2.3E-06 44.5 3.8 103 76-178 37-169 (260)
129 3bwc_A Spermidine synthase; SA 92.9 0.074 2.5E-06 45.6 3.8 96 76-179 96-210 (304)
130 1fbn_A MJ fibrillarin homologu 92.8 0.17 5.8E-06 40.7 5.7 87 77-178 76-177 (230)
131 2fca_A TRNA (guanine-N(7)-)-me 92.8 0.061 2.1E-06 43.3 2.9 91 76-178 39-152 (213)
132 4e2x_A TCAB9; kijanose, tetron 92.8 0.049 1.7E-06 47.9 2.5 88 76-179 108-208 (416)
133 2i7c_A Spermidine synthase; tr 92.7 0.064 2.2E-06 45.5 3.1 93 77-178 80-191 (283)
134 3c3p_A Methyltransferase; NP_9 92.6 0.061 2.1E-06 42.6 2.7 91 77-182 58-163 (210)
135 3p2e_A 16S rRNA methylase; met 92.5 0.23 8E-06 40.5 6.2 92 77-179 26-139 (225)
136 1jsx_A Glucose-inhibited divis 92.5 0.057 1.9E-06 42.3 2.3 86 77-179 67-165 (207)
137 3dr5_A Putative O-methyltransf 92.5 0.068 2.3E-06 43.7 2.8 90 78-182 59-166 (221)
138 2p8j_A S-adenosylmethionine-de 92.4 0.1 3.4E-06 40.7 3.7 96 77-184 25-133 (209)
139 2vdv_E TRNA (guanine-N(7)-)-me 92.3 0.037 1.3E-06 45.3 1.1 23 76-98 50-73 (246)
140 2vdw_A Vaccinia virus capping 92.3 0.046 1.6E-06 47.0 1.7 42 131-180 128-170 (302)
141 3htx_A HEN1; HEN1, small RNA m 92.2 0.24 8.1E-06 49.6 6.8 94 76-178 722-833 (950)
142 1ej0_A FTSJ; methyltransferase 92.1 0.4 1.4E-05 35.4 6.5 86 77-181 24-138 (180)
143 3adn_A Spermidine synthase; am 92.0 0.11 3.9E-06 44.5 3.8 95 76-178 84-197 (294)
144 3orh_A Guanidinoacetate N-meth 91.9 0.046 1.6E-06 44.8 1.2 96 76-180 61-171 (236)
145 3giw_A Protein of unknown func 91.9 0.37 1.3E-05 41.7 6.9 96 77-183 80-204 (277)
146 2avd_A Catechol-O-methyltransf 91.8 0.088 3E-06 41.9 2.7 90 77-181 71-181 (229)
147 3c3y_A Pfomt, O-methyltransfer 91.8 0.11 3.8E-06 42.5 3.5 88 77-179 72-181 (237)
148 1o9g_A RRNA methyltransferase; 91.8 0.17 5.9E-06 41.2 4.6 45 132-181 168-216 (250)
149 3grz_A L11 mtase, ribosomal pr 91.8 0.082 2.8E-06 41.4 2.5 90 77-183 62-163 (205)
150 3bzb_A Uncharacterized protein 91.8 0.27 9.3E-06 41.2 5.9 92 77-178 81-204 (281)
151 3bgv_A MRNA CAP guanine-N7 met 91.7 0.077 2.6E-06 44.8 2.4 95 77-180 36-156 (313)
152 3lbf_A Protein-L-isoaspartate 91.7 0.16 5.4E-06 39.8 4.1 85 76-179 78-174 (210)
153 2avn_A Ubiquinone/menaquinone 91.6 0.059 2E-06 44.2 1.5 87 77-179 56-152 (260)
154 3ckk_A TRNA (guanine-N(7)-)-me 91.5 0.058 2E-06 44.6 1.4 92 77-178 48-167 (235)
155 2bm8_A Cephalosporin hydroxyla 91.4 0.82 2.8E-05 37.4 8.3 86 77-180 83-188 (236)
156 2pt6_A Spermidine synthase; tr 91.3 0.1 3.6E-06 45.2 2.8 93 77-178 118-229 (321)
157 3gjy_A Spermidine synthase; AP 91.1 0.18 6.2E-06 44.3 4.2 92 77-179 91-200 (317)
158 1o54_A SAM-dependent O-methylt 91.0 0.12 4.2E-06 42.8 2.9 87 77-180 114-214 (277)
159 1mjf_A Spermidine synthase; sp 91.0 0.13 4.6E-06 43.4 3.1 93 76-178 76-192 (281)
160 1ws6_A Methyltransferase; stru 90.9 0.082 2.8E-06 39.6 1.6 90 77-180 43-148 (171)
161 3q7e_A Protein arginine N-meth 90.8 0.1 3.4E-06 45.6 2.3 90 77-176 68-170 (349)
162 1nt2_A Fibrillarin-like PRE-rR 90.7 0.46 1.6E-05 38.2 6.0 88 76-178 58-160 (210)
163 2frn_A Hypothetical protein PH 90.7 0.15 5.3E-06 42.8 3.2 91 76-182 126-228 (278)
164 1jg1_A PIMT;, protein-L-isoasp 90.7 0.25 8.5E-06 39.8 4.4 84 77-179 93-189 (235)
165 1iy9_A Spermidine synthase; ro 90.6 0.063 2.2E-06 45.4 0.8 95 76-178 76-188 (275)
166 2fyt_A Protein arginine N-meth 90.4 0.2 7E-06 43.5 3.9 91 77-176 66-168 (340)
167 3dmg_A Probable ribosomal RNA 90.2 0.19 6.5E-06 44.8 3.6 92 76-179 234-340 (381)
168 2yxl_A PH0851 protein, 450AA l 90.2 0.23 7.7E-06 44.9 4.1 106 76-186 260-396 (450)
169 2esr_A Methyltransferase; stru 90.2 0.36 1.2E-05 36.7 4.7 91 77-181 33-140 (177)
170 3ajd_A Putative methyltransfer 90.2 0.77 2.6E-05 38.3 7.2 108 76-188 84-220 (274)
171 3cbg_A O-methyltransferase; cy 90.1 0.11 3.9E-06 42.1 1.9 91 77-182 74-185 (232)
172 1g8a_A Fibrillarin-like PRE-rR 90.1 0.52 1.8E-05 37.4 5.8 88 77-178 75-177 (227)
173 3evz_A Methyltransferase; NYSG 89.7 0.3 1E-05 38.8 4.0 99 76-178 56-178 (230)
174 3dxy_A TRNA (guanine-N(7)-)-me 89.7 0.063 2.1E-06 43.8 0.0 91 76-178 35-149 (218)
175 1g6q_1 HnRNP arginine N-methyl 89.7 0.16 5.6E-06 43.7 2.7 91 77-176 40-142 (328)
176 1xj5_A Spermidine synthase 1; 89.7 0.13 4.4E-06 45.2 2.0 94 76-178 121-234 (334)
177 3tma_A Methyltransferase; thum 89.7 0.59 2E-05 40.3 6.2 95 77-179 205-317 (354)
178 1dl5_A Protein-L-isoaspartate 89.6 0.33 1.1E-05 41.4 4.5 84 77-179 77-175 (317)
179 2frx_A Hypothetical protein YE 89.5 0.89 3E-05 41.8 7.6 107 76-187 118-254 (479)
180 2ipx_A RRNA 2'-O-methyltransfe 89.4 0.27 9.3E-06 39.4 3.6 88 76-177 78-180 (233)
181 2o07_A Spermidine synthase; st 89.4 0.12 4E-06 44.6 1.4 96 76-179 96-209 (304)
182 1uir_A Polyamine aminopropyltr 89.3 0.14 4.9E-06 44.0 2.0 95 76-178 78-194 (314)
183 1sqg_A SUN protein, FMU protei 89.2 0.26 8.9E-06 44.1 3.7 104 76-185 247-380 (429)
184 2nxc_A L11 mtase, ribosomal pr 89.2 0.39 1.3E-05 39.6 4.5 90 77-183 122-222 (254)
185 2yxe_A Protein-L-isoaspartate 88.9 0.39 1.3E-05 37.7 4.1 84 77-179 79-177 (215)
186 1yb2_A Hypothetical protein TA 88.9 0.28 9.4E-06 40.8 3.4 88 76-180 111-212 (275)
187 1vbf_A 231AA long hypothetical 88.6 0.36 1.2E-05 38.3 3.8 82 77-179 72-165 (231)
188 1i9g_A Hypothetical protein RV 88.5 0.29 9.9E-06 40.2 3.2 89 77-180 101-204 (280)
189 4df3_A Fibrillarin-like rRNA/T 88.2 0.63 2.1E-05 39.0 5.2 92 73-179 76-182 (233)
190 1xdz_A Methyltransferase GIDB; 88.1 0.19 6.4E-06 40.8 1.8 86 77-179 72-174 (240)
191 3g89_A Ribosomal RNA small sub 88.1 0.25 8.5E-06 41.0 2.6 88 76-180 81-185 (249)
192 3m6w_A RRNA methylase; rRNA me 88.0 0.45 1.6E-05 43.8 4.5 102 76-183 102-233 (464)
193 2ld4_A Anamorsin; methyltransf 87.6 0.29 1E-05 37.3 2.6 43 131-183 62-105 (176)
194 2yxd_A Probable cobalt-precorr 87.4 1 3.4E-05 33.7 5.5 83 77-180 37-132 (183)
195 3lcv_B Sisomicin-gentamicin re 87.3 0.055 1.9E-06 47.3 -2.0 99 76-185 133-244 (281)
196 1inl_A Spermidine synthase; be 86.7 0.22 7.6E-06 42.4 1.5 94 76-178 91-204 (296)
197 2aot_A HMT, histamine N-methyl 86.3 0.32 1.1E-05 40.6 2.3 40 131-180 134-173 (292)
198 2pwy_A TRNA (adenine-N(1)-)-me 86.3 0.41 1.4E-05 38.4 2.9 88 77-181 98-200 (258)
199 2yvl_A TRMI protein, hypotheti 86.3 0.79 2.7E-05 36.5 4.5 87 77-180 93-191 (248)
200 1ne2_A Hypothetical protein TA 85.9 0.8 2.7E-05 35.6 4.3 87 77-179 53-146 (200)
201 2plw_A Ribosomal RNA methyltra 85.8 1.3 4.4E-05 34.1 5.5 21 77-97 24-45 (201)
202 2h00_A Methyltransferase 10 do 85.7 0.031 1.1E-06 45.6 -4.2 48 77-126 67-121 (254)
203 2ift_A Putative methylase HI07 85.6 0.55 1.9E-05 37.1 3.2 92 77-181 55-165 (201)
204 2zfu_A Nucleomethylin, cerebra 85.5 0.31 1.1E-05 38.3 1.7 41 131-182 114-154 (215)
205 2nyu_A Putative ribosomal RNA 85.5 0.49 1.7E-05 36.3 2.8 22 77-98 24-46 (196)
206 2fhp_A Methylase, putative; al 85.0 0.59 2E-05 35.4 3.1 93 77-180 46-155 (187)
207 2pbf_A Protein-L-isoaspartate 84.7 0.5 1.7E-05 37.4 2.6 85 77-179 82-193 (227)
208 1p91_A Ribosomal RNA large sub 83.8 0.81 2.8E-05 37.2 3.6 86 77-181 87-180 (269)
209 1jmt_A Splicing factor U2AF 35 83.6 0.35 1.2E-05 35.1 1.1 51 133-183 1-62 (104)
210 2ih2_A Modification methylase 81.7 3.8 0.00013 35.5 7.3 89 77-179 41-164 (421)
211 3gdh_A Trimethylguanosine synt 81.5 0.053 1.8E-06 43.7 -4.5 65 77-143 80-155 (241)
212 3opn_A Putative hemolysin; str 81.4 2.3 7.9E-05 34.8 5.5 20 159-178 117-136 (232)
213 3hp7_A Hemolysin, putative; st 80.6 3.2 0.00011 35.8 6.3 83 76-178 86-184 (291)
214 2cmg_A Spermidine synthase; tr 79.9 3 0.0001 34.9 5.8 86 77-178 74-170 (262)
215 2fpo_A Methylase YHHF; structu 79.6 1.8 6.2E-05 34.1 4.1 91 77-181 56-162 (202)
216 3m4x_A NOL1/NOP2/SUN family pr 78.5 1.6 5.4E-05 40.1 3.8 104 76-184 106-239 (456)
217 1wy7_A Hypothetical protein PH 77.6 5.1 0.00018 30.8 6.2 81 77-169 51-141 (207)
218 2g72_A Phenylethanolamine N-me 76.6 0.53 1.8E-05 39.0 0.1 41 133-181 175-217 (289)
219 2p41_A Type II methyltransfera 76.1 6 0.0002 33.8 6.7 89 77-177 84-189 (305)
220 2i62_A Nicotinamide N-methyltr 75.6 0.55 1.9E-05 37.7 -0.1 43 131-181 156-200 (265)
221 2igt_A SAM dependent methyltra 74.7 5.9 0.0002 34.2 6.3 98 77-181 155-274 (332)
222 2a14_A Indolethylamine N-methy 74.5 1.2 4E-05 36.6 1.7 42 132-181 156-199 (263)
223 2b25_A Hypothetical protein; s 74.4 1.6 5.4E-05 37.2 2.5 89 77-180 107-220 (336)
224 1i1n_A Protein-L-isoaspartate 73.4 1.8 6.3E-05 34.0 2.5 86 76-179 78-182 (226)
225 3a27_A TYW2, uncharacterized p 72.6 1.5 5.1E-05 36.6 1.9 92 76-184 120-224 (272)
226 1r18_A Protein-L-isoaspartate( 71.7 1.6 5.3E-05 34.7 1.7 85 76-178 85-193 (227)
227 2as0_A Hypothetical protein PH 69.8 4.8 0.00016 35.2 4.6 99 76-181 218-337 (396)
228 4hc4_A Protein arginine N-meth 68.9 2.7 9.3E-05 37.5 2.9 90 78-176 86-186 (376)
229 3tm4_A TRNA (guanine N2-)-meth 66.9 8.6 0.0003 33.5 5.7 94 76-178 218-328 (373)
230 3frh_A 16S rRNA methylase; met 66.0 2.1 7E-05 36.8 1.4 92 77-184 107-213 (253)
231 2yx1_A Hypothetical protein MJ 64.7 3.7 0.00013 35.3 2.8 91 76-183 196-295 (336)
232 3u1l_A PRE-mRNA-splicing facto 64.6 1.3 4.5E-05 37.4 -0.1 29 107-136 72-100 (240)
233 3id6_C Fibrillarin-like rRNA/T 63.2 9.1 0.00031 31.6 4.8 22 76-97 77-99 (232)
234 3sso_A Methyltransferase; macr 62.1 11 0.00038 34.4 5.6 84 76-181 217-326 (419)
235 2oxt_A Nucleoside-2'-O-methylt 62.0 11 0.00037 31.5 5.1 93 77-177 76-183 (265)
236 2wa2_A Non-structural protein 60.5 10 0.00034 32.0 4.7 93 77-177 84-191 (276)
237 3k6r_A Putative transferase PH 60.2 2.4 8.1E-05 36.3 0.7 92 77-184 127-230 (278)
238 1zq9_A Probable dimethyladenos 60.2 2.9 9.7E-05 35.2 1.2 76 77-163 30-115 (285)
239 2f8l_A Hypothetical protein LM 60.2 3.5 0.00012 35.3 1.8 23 76-98 131-154 (344)
240 1m9o_A Tristetraproline; Cys3H 59.6 3.5 0.00012 28.0 1.3 25 104-128 11-35 (77)
241 3ldg_A Putative uncharacterize 59.0 27 0.00092 30.9 7.4 56 118-179 280-343 (384)
242 3m33_A Uncharacterized protein 57.8 1.1 3.8E-05 35.7 -1.7 76 77-176 50-139 (226)
243 2b78_A Hypothetical protein SM 57.3 7.2 0.00025 34.2 3.4 97 77-180 214-332 (385)
244 1yub_A Ermam, rRNA methyltrans 55.6 3.2 0.00011 33.7 0.7 23 76-98 30-53 (245)
245 1wxx_A TT1595, hypothetical pr 53.9 9.8 0.00033 33.1 3.6 97 77-181 211-327 (382)
246 4dmg_A Putative uncharacterize 53.2 12 0.00041 33.2 4.1 100 77-183 216-330 (393)
247 3k0b_A Predicted N6-adenine-sp 52.5 14 0.00049 32.7 4.5 21 77-97 203-224 (393)
248 2xyq_A Putative 2'-O-methyl tr 48.7 37 0.0013 28.9 6.4 24 156-179 148-171 (290)
249 3s6e_A RNA-binding protein 39; 45.7 14 0.00049 27.0 2.9 44 130-178 4-47 (114)
250 1qam_A ERMC' methyltransferase 45.2 33 0.0011 27.8 5.3 22 77-98 32-54 (244)
251 3c0k_A UPF0064 protein YCCW; P 45.1 11 0.00037 32.9 2.5 96 77-180 222-340 (396)
252 2d9m_A Zinc finger CCCH-type d 45.0 6.4 0.00022 27.4 0.8 21 106-127 21-41 (69)
253 2qfm_A Spermine synthase; sper 43.9 19 0.00067 32.1 4.0 104 75-179 188-314 (364)
254 4azs_A Methyltransferase WBDD; 43.7 3.2 0.00011 38.4 -1.2 98 77-185 68-179 (569)
255 3v97_A Ribosomal RNA large sub 42.8 25 0.00087 33.6 4.8 98 77-181 541-659 (703)
256 3v4m_A Splicing factor U2AF 65 42.7 31 0.0011 24.5 4.3 46 133-183 5-50 (105)
257 3ldu_A Putative methylase; str 41.7 27 0.00091 30.7 4.5 55 118-179 281-344 (385)
258 2cz4_A Hypothetical protein TT 41.4 32 0.0011 25.7 4.3 28 153-180 81-110 (119)
259 3kpa_A Probable ubiquitin fold 39.2 16 0.00054 29.4 2.3 69 18-105 54-145 (168)
260 2cqe_A KIAA1064 protein; CCCH 30.8 17 0.00058 26.3 1.2 22 105-127 13-34 (98)
261 3ue2_A Poly(U)-binding-splicin 30.4 29 0.001 25.4 2.4 40 132-181 19-58 (118)
262 3o4f_A Spermidine synthase; am 29.6 22 0.00077 30.6 1.9 95 78-178 86-197 (294)
263 2okc_A Type I restriction enzy 24.9 48 0.0016 29.3 3.2 21 159-179 287-307 (445)
264 2jjq_A Uncharacterized RNA met 22.7 1.3E+02 0.0044 26.7 5.7 23 76-98 291-314 (425)
265 2pe8_A Splicing factor 45; RRM 20.2 75 0.0026 22.4 3.0 44 130-183 5-48 (105)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.74 E-value=1.7e-18 Score=153.51 Aligned_cols=144 Identities=15% Similarity=0.208 Sum_probs=107.0
Q ss_pred CCCCcccccccCcchhhccCCcEEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecC-ChHHHHHHHHHHCC
Q 044941 19 DEDDDWESVEEGPAEIIWQGNEIIIRKKKVRVPKKDANPLSKKEDVDRPTSNPLPPQSEAFADHQ-NAQQALETVAQQVP 97 (202)
Q Consensus 19 ~~~~~we~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~-g~G~ll~~ll~~~P 97 (202)
...+.|+|+.++|++ ...|.+.|..+.. .....+ .+.++|+.. ..++|+| |.|.++.+++++||
T Consensus 138 ~~~~~~~~~~~~~~~------~~~f~~aM~~~~~--~~~~~~--~~~~~~~~~-----~~v~DvGgG~G~~~~~l~~~~p 202 (353)
T 4a6d_A 138 PAEELFTAIYRSEGE------RLQFMQALQEVWS--VNGRSV--LTAFDLSVF-----PLMCDLGGGAGALAKECMSLYP 202 (353)
T ss_dssp CCSSHHHHHTSSHHH------HHHHHHHHHTTHH--HHHHHH--HHSSCGGGC-----SEEEEETCTTSHHHHHHHHHCS
T ss_pred ChHHHHHHHhhCHHH------HHHHHHHHHHHHH--HHHHHH--HHhcCcccC-----CeEEeeCCCCCHHHHHHHHhCC
Confidence 445789999988877 3345566653211 000111 235567643 3699997 99999999999999
Q ss_pred CC-----CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHh
Q 044941 98 NF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYK 167 (202)
Q Consensus 98 ~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~ 167 (202)
++ |+|.+.+.++..... ...+||+++ ||| +.++|+|++++ |||+|+|++|.+||++|++
T Consensus 203 ~~~~~~~dlp~v~~~a~~~~~~---~~~~rv~~~~gD~~~~~~~~~D~~~~~~--------vlh~~~d~~~~~iL~~~~~ 271 (353)
T 4a6d_A 203 GCKITVFDIPEVVWTAKQHFSF---QEEEQIDFQEGDFFKDPLPEADLYILAR--------VLHDWADGKCSHLLERIYH 271 (353)
T ss_dssp SCEEEEEECHHHHHHHHHHSCC-----CCSEEEEESCTTTSCCCCCSEEEEES--------SGGGSCHHHHHHHHHHHHH
T ss_pred CceeEeccCHHHHHHHHHhhhh---cccCceeeecCccccCCCCCceEEEeee--------ecccCCHHHHHHHHHHHHh
Confidence 96 555555555554432 347899999 677 35699999999 8999999999999999999
Q ss_pred hCCCCCEEEEeeeccCCCCCc
Q 044941 168 ALPAGGKLIACEPVLPDDSNE 188 (202)
Q Consensus 168 AL~~gGrLlI~E~vl~~~~~~ 188 (202)
+|+|||+|+|+|.++++++..
T Consensus 272 al~pgg~lli~e~~~~~~~~~ 292 (353)
T 4a6d_A 272 TCKPGGGILVIESLLDEDRRG 292 (353)
T ss_dssp HCCTTCEEEEEECCCCTTSCC
T ss_pred hCCCCCEEEEEEeeeCCCCCC
Confidence 999999999999999987653
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.48 E-value=8.7e-14 Score=123.66 Aligned_cols=112 Identities=24% Similarity=0.556 Sum_probs=84.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWV 149 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~V 149 (202)
..++|+| |.|.++..+++++|++ .+..|.+. .+... +-.+|++++ +++ |. +|+|++++ +
T Consensus 203 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~---~~~~a--~~~~~v~~~~~D~~~~~p~-~D~v~~~~--------v 268 (364)
T 3p9c_A 203 GTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPH---VISEA--PQFPGVTHVGGDMFKEVPS-GDTILMKW--------I 268 (364)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHH---HHTTC--CCCTTEEEEECCTTTCCCC-CSEEEEES--------C
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHH---HHHhh--hhcCCeEEEeCCcCCCCCC-CCEEEehH--------H
Confidence 5799997 9999999999999996 33344321 12111 223588888 554 65 49999999 8
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCCchHHhhhhhhccccC
Q 044941 150 LTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDILL 202 (202)
Q Consensus 150 LHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~~~~~~~~~~~mDm~M 202 (202)
+|+|+|+++.++|++|+++|+|||+|+|+|.++++........+....+|+.|
T Consensus 269 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m 321 (364)
T 3p9c_A 269 LHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIM 321 (364)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHH
Confidence 89999999999999999999999999999999988655433334444555543
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.44 E-value=2.7e-13 Score=120.43 Aligned_cols=112 Identities=23% Similarity=0.509 Sum_probs=84.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWV 149 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~V 149 (202)
.+++|+| |.|.++..+++++|++ .+..|.+.. +... +-..|++++ +++ |. +|+|++++ +
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~---~~~a--~~~~~v~~~~~d~~~~~p~-~D~v~~~~--------v 270 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDLPHV---IQDA--PAFSGVEHLGGDMFDGVPK-GDAIFIKW--------I 270 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHH---HTTC--CCCTTEEEEECCTTTCCCC-CSEEEEES--------C
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHH---HHhh--hhcCCCEEEecCCCCCCCC-CCEEEEec--------h
Confidence 5799997 9999999999999996 333343211 1111 122578887 554 65 49999999 8
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCCchHHhhhhhhccccC
Q 044941 150 LTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDILL 202 (202)
Q Consensus 150 LHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~~~~~~~~~~~mDm~M 202 (202)
+|+|+|+++.++|++++++|+|||+|+|+|.++++........+....+|+.|
T Consensus 271 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~ 323 (368)
T 3reo_A 271 CHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALM 323 (368)
T ss_dssp GGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHH
Confidence 89999999999999999999999999999999987665433334444555543
No 4
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.39 E-value=7.6e-13 Score=117.05 Aligned_cols=101 Identities=10% Similarity=0.089 Sum_probs=83.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec------CCCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY------PNKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff------P~~AD~ylLk~m~ 142 (202)
.+++|+| |.|.++..+++++|++ |++...+.+...... .++.+|++++ +++ |.++|+|++++
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~--~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~-- 256 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAG--LSGSERIHGHGANLLDRDVPFPTGFDAVWMSQ-- 256 (363)
T ss_dssp SEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTT--CTTGGGEEEEECCCCSSSCCCCCCCSEEEEES--
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHh--cCcccceEEEEccccccCCCCCCCcCEEEEec--
Confidence 5799997 9999999999999996 445455555554432 2566899998 443 45689999999
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
++|+|+|+++.++|++++++|+|||+|+|+|.+.++...
T Consensus 257 ------vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~ 295 (363)
T 3dp7_A 257 ------FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRY 295 (363)
T ss_dssp ------CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSS
T ss_pred ------hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccc
Confidence 889999999999999999999999999999999987654
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.37 E-value=8.4e-13 Score=117.02 Aligned_cols=102 Identities=19% Similarity=0.364 Sum_probs=84.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++++|++ |++...+.+...+... ++.+|++++ +++ |.++|+|++++
T Consensus 204 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~p~~~D~v~~~~----- 276 (369)
T 3gwz_A 204 ATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGR--GLADRCEILPGDFFETIPDGADVYLIKH----- 276 (369)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHT--TCTTTEEEEECCTTTCCCSSCSEEEEES-----
T ss_pred cEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhc--CcCCceEEeccCCCCCCCCCceEEEhhh-----
Confidence 5799997 9999999999999985 4444445555444332 567899998 554 66799999999
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCCc
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNE 188 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~~ 188 (202)
++|+|+|+++.++|++++++|+|||+|+|+|.+.++...+
T Consensus 277 ---vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~ 316 (369)
T 3gwz_A 277 ---VLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAA 316 (369)
T ss_dssp ---CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCH
T ss_pred ---hhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC
Confidence 8899999999999999999999999999999999886553
No 6
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.32 E-value=2e-12 Score=113.43 Aligned_cols=139 Identities=19% Similarity=0.287 Sum_probs=97.4
Q ss_pred CcccccccCcchhhccCCcEEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecC-ChHHHHHHHHHHCCCC-
Q 044941 22 DDWESVEEGPAEIIWQGNEIIIRKKKVRVPKKDANPLSKKEDVDRPTSNPLPPQSEAFADHQ-NAQQALETVAQQVPNF- 99 (202)
Q Consensus 22 ~~we~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~-g~G~ll~~ll~~~P~l- 99 (202)
+.|||++++|+. ...|.+.|......... .. -+.++|+. ..+++|+| |.|.++..+++++|+.
T Consensus 146 ~~~~~~~~~~~~------~~~f~~~m~~~~~~~~~--~~--~~~~~~~~-----~~~vLDvG~G~G~~~~~l~~~~p~~~ 210 (348)
T 3lst_A 146 SLDAYFDGDAEV------EALYYEGMETVSAAEHL--IL--ARAGDFPA-----TGTVADVGGGRGGFLLTVLREHPGLQ 210 (348)
T ss_dssp CHHHHHTTCHHH------HHHHHHHHHHHHHTTHH--HH--HHHSCCCS-----SEEEEEETCTTSHHHHHHHHHCTTEE
T ss_pred CHHHHHHhCHHH------HHHHHHHHHHhhhhhHH--HH--HHhCCccC-----CceEEEECCccCHHHHHHHHHCCCCE
Confidence 489999887754 22344444432111000 00 12345542 35799997 9999999999999995
Q ss_pred ----CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCC
Q 044941 100 ----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALP 170 (202)
Q Consensus 100 ----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~ 170 (202)
|.+.... ....+ ..+..+|++++ +++ | .+|+|++.+ ++|+|+|+++.++|++++++|+
T Consensus 211 ~~~~D~~~~~~--~~~~~--~~~~~~~v~~~~~d~~~~~p-~~D~v~~~~--------vlh~~~d~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 211 GVLLDRAEVVA--RHRLD--APDVAGRWKVVEGDFLREVP-HADVHVLKR--------ILHNWGDEDSVRILTNCRRVMP 277 (348)
T ss_dssp EEEEECHHHHT--TCCCC--CGGGTTSEEEEECCTTTCCC-CCSEEEEES--------CGGGSCHHHHHHHHHHHHHTCC
T ss_pred EEEecCHHHhh--ccccc--ccCCCCCeEEEecCCCCCCC-CCcEEEEeh--------hccCCCHHHHHHHHHHHHHhcC
Confidence 3333322 11111 12567899998 554 7 799999999 8899999999999999999999
Q ss_pred CCCEEEEeeeccCCCCCc
Q 044941 171 AGGKLIACEPVLPDDSNE 188 (202)
Q Consensus 171 ~gGrLlI~E~vl~~~~~~ 188 (202)
|||+|+|+|.+.++...+
T Consensus 278 pgG~l~i~e~~~~~~~~~ 295 (348)
T 3lst_A 278 AHGRVLVIDAVVPEGNDA 295 (348)
T ss_dssp TTCEEEEEECCBCSSSSC
T ss_pred CCCEEEEEEeccCCCCCc
Confidence 999999999999876543
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.31 E-value=2.8e-12 Score=111.23 Aligned_cols=139 Identities=16% Similarity=0.236 Sum_probs=98.6
Q ss_pred CcccccccCcchhhccCCcEEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCCcceeecC-ChHHHHHHHHHHCCCC-
Q 044941 22 DDWESVEEGPAEIIWQGNEIIIRKKKVRVPKKDANPLSKKEDVDRPTSNPLPPQSEAFADHQ-NAQQALETVAQQVPNF- 99 (202)
Q Consensus 22 ~~we~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~~-g~G~ll~~ll~~~P~l- 99 (202)
+.|||+.++|+. ...|...|......... .. -..++|+.. .+++|+| |.|.++..+++++|+.
T Consensus 131 ~~~~~~~~~~~~------~~~f~~~m~~~~~~~~~--~~--~~~~~~~~~-----~~vlDvG~G~G~~~~~l~~~~p~~~ 195 (332)
T 3i53_A 131 SFWEDLGSDPVL------SASFDTLMSHHLELDYT--GI--AAKYDWAAL-----GHVVDVGGGSGGLLSALLTAHEDLS 195 (332)
T ss_dssp CHHHHHHHCHHH------HHHHHHHHHHHHHHHHT--TG--GGSSCCGGG-----SEEEEETCTTSHHHHHHHHHCTTCE
T ss_pred CHHHHHHhCHHH------HHHHHHHHHHhHHhhHH--HH--HHhCCCCCC-----CEEEEeCCChhHHHHHHHHHCCCCe
Confidence 478888877664 22344444322111000 11 234466532 4799997 9999999999999995
Q ss_pred ----CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCC
Q 044941 100 ----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALP 170 (202)
Q Consensus 100 ----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~ 170 (202)
|++...+.+...+... ++.+|++++ +++ |.++|+|++++ ++|+|+|+++.++|++++++|+
T Consensus 196 ~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~p~~~D~v~~~~--------vlh~~~~~~~~~~l~~~~~~L~ 265 (332)
T 3i53_A 196 GTVLDLQGPASAAHRRFLDT--GLSGRAQVVVGSFFDPLPAGAGGYVLSA--------VLHDWDDLSAVAILRRCAEAAG 265 (332)
T ss_dssp EEEEECHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCCCSCSEEEEES--------CGGGSCHHHHHHHHHHHHHHHT
T ss_pred EEEecCHHHHHHHHHhhhhc--CcCcCeEEecCCCCCCCCCCCcEEEEeh--------hhccCCHHHHHHHHHHHHHhcC
Confidence 4444444455444332 567899998 554 65799999999 8899999999999999999999
Q ss_pred CCCEEEEeeeccCCC
Q 044941 171 AGGKLIACEPVLPDD 185 (202)
Q Consensus 171 ~gGrLlI~E~vl~~~ 185 (202)
|||+|+|+|.+.++.
T Consensus 266 pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 266 SGGVVLVIEAVAGDE 280 (332)
T ss_dssp TTCEEEEEECCCC--
T ss_pred CCCEEEEEeecCCCC
Confidence 999999999998875
No 8
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.27 E-value=4.4e-12 Score=110.44 Aligned_cols=109 Identities=12% Similarity=0.215 Sum_probs=86.0
Q ss_pred CCCCCCCCCCCCcceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec------C
Q 044941 65 DRPTSNPLPPQSEAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY------P 130 (202)
Q Consensus 65 ~~~~~~~~~p~~~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff------P 130 (202)
.++|+. ...+++|+| |.|.++..+++++|+. |++.....+....+.. ++.+|++++ +++ |
T Consensus 173 ~~~~~~----~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 173 ELGVFA----RARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAH--DLGGRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp TCGGGT----TCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHT--TCGGGEEEEECCTTCGGGGTT
T ss_pred hCCCcC----CCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhc--CCCCceEEEeCCcccCcccCC
Confidence 445553 135799998 9999999999999985 4444444444444332 566789988 443 4
Q ss_pred CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 131 NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 131 ~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
.++|+|++++ ++|+|+|+++.++|++++++|+|||+|+|+|.++++...
T Consensus 247 ~~~D~v~~~~--------vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~ 295 (352)
T 3mcz_A 247 GAADVVMLND--------CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRV 295 (352)
T ss_dssp CCEEEEEEES--------CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSS
T ss_pred CCccEEEEec--------ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC
Confidence 5689999999 889999999999999999999999999999999988754
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.27 E-value=5.8e-12 Score=108.96 Aligned_cols=101 Identities=17% Similarity=0.302 Sum_probs=80.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++++|+. |++.....+...++.. ++.+|++++ +++ |.++|+|++.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~D~v~~~~----- 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSL--LAGERVSLVGGDMLQEVPSNGDIYLLSR----- 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHH--HHTTSEEEEESCTTTCCCSSCSEEEEES-----
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhc--CCCCcEEEecCCCCCCCCCCCCEEEEch-----
Confidence 4799997 9999999999999985 3333333333333221 356788888 453 66799999999
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
++|+|+++++.++|++++++|+|||+|+|+|.+.++...
T Consensus 242 ---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~ 280 (334)
T 2ip2_A 242 ---IIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP 280 (334)
T ss_dssp ---CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC
T ss_pred ---hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC
Confidence 889999999999999999999999999999999887554
No 10
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.15 E-value=6.9e-11 Score=103.78 Aligned_cols=97 Identities=21% Similarity=0.350 Sum_probs=75.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWV 149 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~V 149 (202)
.+++|+| |.|.++..+++++|++ .+..|.+ ..+... ..+ .+++++ +++ |. +|+|++.+ +
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a-~~~-~~v~~~~~d~~~~~~~-~D~v~~~~--------v 260 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQP---QVVGNL-TGN-ENLNFVGGDMFKSIPS-ADAVLLKW--------V 260 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEECH---HHHSSC-CCC-SSEEEEECCTTTCCCC-CSEEEEES--------C
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEeccH---HHHhhc-ccC-CCcEEEeCccCCCCCC-ceEEEEcc--------c
Confidence 4799997 9999999999999986 2333321 111111 112 347776 454 54 99999998 8
Q ss_pred cCCCCHHHHHHHHHHHHhhCCC---CCEEEEeeeccCCCCC
Q 044941 150 LTTWTDDECKLIMENCYKALPA---GGKLIACEPVLPDDSN 187 (202)
Q Consensus 150 LHdW~Dee~~~IL~~~~~AL~~---gGrLlI~E~vl~~~~~ 187 (202)
+|+|+|+++.++|++++++|+| ||+|+|+|.+.++...
T Consensus 261 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~ 301 (358)
T 1zg3_A 261 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSD 301 (358)
T ss_dssp GGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCS
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCc
Confidence 8999999999999999999999 9999999999987654
No 11
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.12 E-value=1.4e-10 Score=101.59 Aligned_cols=93 Identities=20% Similarity=0.438 Sum_probs=74.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++++|++ |++.....+.. + .+++++ +++ |. +|+|++.+
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~--------~-~~v~~~~~d~~~~~p~-~D~v~~~~----- 254 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG--------S-NNLTYVGGDMFTSIPN-ADAVLLKY----- 254 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC--------B-TTEEEEECCTTTCCCC-CSEEEEES-----
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc--------C-CCcEEEeccccCCCCC-ccEEEeeh-----
Confidence 5799997 9999999999999986 33222222221 1 247776 454 55 99999998
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCC---CCEEEEeeeccCCCCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPA---GGKLIACEPVLPDDSN 187 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~---gGrLlI~E~vl~~~~~ 187 (202)
++|+|+|+++.++|++++++|+| ||+|+|+|.+.++...
T Consensus 255 ---~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~ 296 (352)
T 1fp2_A 255 ---ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKD 296 (352)
T ss_dssp ---CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTS
T ss_pred ---hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCC
Confidence 88999999999999999999999 9999999999887654
No 12
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.11 E-value=9.7e-11 Score=103.50 Aligned_cols=97 Identities=26% Similarity=0.515 Sum_probs=75.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhcccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNVKFQWV 149 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~P~k~V 149 (202)
.+++|+| |.|.++..+++++|++ .+..|.+ ..+... +-..+++++ +++ |. +|+|++.+ +
T Consensus 211 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~---~~~~~a--~~~~~v~~~~~d~~~~~~~-~D~v~~~~--------~ 276 (372)
T 1fp1_D 211 STLVDVGGGSGRNLELIISKYPLIKGINFDLP---QVIENA--PPLSGIEHVGGDMFASVPQ-GDAMILKA--------V 276 (372)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECH---HHHTTC--CCCTTEEEEECCTTTCCCC-EEEEEEES--------S
T ss_pred CEEEEeCCCCcHHHHHHHHHCCCCeEEEeChH---HHHHhh--hhcCCCEEEeCCcccCCCC-CCEEEEec--------c
Confidence 5799997 9999999999999986 3333331 111111 111357777 454 55 89999998 8
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 150 LTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 150 LHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
+|+|+|+++.++|++++++|+|||+|+|+|.+.++...
T Consensus 277 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~ 314 (372)
T 1fp1_D 277 CHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPN 314 (372)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCC
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCc
Confidence 89999999999999999999999999999999887654
No 13
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.07 E-value=3.8e-10 Score=98.93 Aligned_cols=99 Identities=12% Similarity=0.248 Sum_probs=79.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec--C-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY--P-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff--P-~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++++|+. |++.....+...++.. ++.+|++++ +++ | ..+|+|++.+
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~D~v~~~~----- 264 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEK--GVADRMRGIAVDIYKESYPEADAVLFCR----- 264 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHT--TCTTTEEEEECCTTTSCCCCCSEEEEES-----
T ss_pred CEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhc--CCCCCEEEEeCccccCCCCCCCEEEEec-----
Confidence 5799997 9999999999999975 4444444444444322 467789888 454 2 3359999998
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|+|+|+++.++|++++++|+|||+|+|+|.+.++.
T Consensus 265 ---vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 301 (359)
T 1x19_A 265 ---ILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP 301 (359)
T ss_dssp ---CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT
T ss_pred ---hhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC
Confidence 8899999999999999999999999999999998765
No 14
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.05 E-value=1.2e-10 Score=101.54 Aligned_cols=100 Identities=23% Similarity=0.398 Sum_probs=79.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--ee---cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HF---YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++++|+. |++.....+....+.. ++.+|++++ ++ +|.++|+|++.+
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~D~v~~~~----- 257 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDE--GLSDRVDVVEGDFFEPLPRKADAIILSF----- 257 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHT--TCTTTEEEEECCTTSCCSSCEEEEEEES-----
T ss_pred cEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhc--CCCCceEEEeCCCCCCCCCCccEEEEcc-----
Confidence 4799997 9999999999999985 3333333444433322 466788888 44 366699999998
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec-cCCCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV-LPDDS 186 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v-l~~~~ 186 (202)
++|+|+++++.++|+++++.|+|||+|+|+|.+ +++..
T Consensus 258 ---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~ 296 (360)
T 1tw3_A 258 ---VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENS 296 (360)
T ss_dssp ---CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGC
T ss_pred ---cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCC
Confidence 889999999999999999999999999999998 77554
No 15
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.03 E-value=1.4e-10 Score=101.54 Aligned_cols=100 Identities=21% Similarity=0.408 Sum_probs=76.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--ee---cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HF---YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++++|+. |++.....+...++.. ++.+|++++ ++ +|.++|+|++.+
T Consensus 184 ~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~D~v~~~~----- 256 (374)
T 1qzz_A 184 RHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADA--GLADRVTVAEGDFFKPLPVTADVVLLSF----- 256 (374)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCSCCEEEEEEES-----
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhc--CCCCceEEEeCCCCCcCCCCCCEEEEec-----
Confidence 5799997 9999999999999985 3333444444444322 566789888 44 366699999998
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee--ccCCCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP--VLPDDS 186 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~--vl~~~~ 186 (202)
++|+|+++++.++|++++..|+|||+|+|+|. ++++..
T Consensus 257 ---vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~ 296 (374)
T 1qzz_A 257 ---VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGA 296 (374)
T ss_dssp ---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH------
T ss_pred ---cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCC
Confidence 88999999999999999999999999999999 887653
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.98 E-value=4e-10 Score=96.81 Aligned_cols=101 Identities=18% Similarity=0.164 Sum_probs=79.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++++|+. |.......+...++.. ++.+|++++ +++ |.++|+|++.+
T Consensus 167 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~D~v~~~~---- 240 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQ--GVASRYHTIAGSAFEVDYGNDYDLVLLPN---- 240 (335)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHH--TCGGGEEEEESCTTTSCCCSCEEEEEEES----
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhc--CCCcceEEEecccccCCCCCCCcEEEEcc----
Confidence 5799997 9999999999999985 3333333444433322 456788888 443 55689999998
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
++|+|+++++.++|+++++.|+|||+++|+|.+.++...
T Consensus 241 ----~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~ 279 (335)
T 2r3s_A 241 ----FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRI 279 (335)
T ss_dssp ----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSS
T ss_pred ----hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcC
Confidence 889999999999999999999999999999999886543
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.18 E-value=2.2e-06 Score=72.87 Aligned_cols=100 Identities=14% Similarity=0.244 Sum_probs=75.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCC--C-----Cc-cccccccchhhhccCCCCCCceeee--ee--cC-CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN--F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--YP-NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~--l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP-~~AD~ylLk~m~ 142 (202)
.++.|+| |.|.++..++++++. . |. +..++.|...++. .+...+++++ ++ +| ..+|++++..
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~--~~~~~~v~~~~~D~~~~~~~~~d~v~~~~-- 147 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA--YKAPTPVDVIEGDIRDIAIENASMVVLNF-- 147 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT--SCCSSCEEEEESCTTTCCCCSEEEEEEES--
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh--hccCceEEEeecccccccccccccceeee--
Confidence 4799998 999999999998643 2 22 3334555554443 2566788887 43 34 4488888776
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCC
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDS 186 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~ 186 (202)
++|..++++..++|++++..|+|||++++.|.+..++.
T Consensus 148 ------~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~ 185 (261)
T 4gek_A 148 ------TLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDA 185 (261)
T ss_dssp ------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSH
T ss_pred ------eeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCH
Confidence 78999999999999999999999999999998877643
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.07 E-value=6.6e-06 Score=66.57 Aligned_cols=96 Identities=11% Similarity=0.120 Sum_probs=72.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++.+|.. |. +.....+....+. .+ +++++ ++. +...|+++...
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~~~~d~~~~~~~~~fD~v~~~~--- 117 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG----NL-KVKYIEADYSKYDFEEKYDMVVSAL--- 117 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS----CT-TEEEEESCTTTCCCCSCEEEEEEES---
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc----CC-CEEEEeCchhccCCCCCceEEEEeC---
Confidence 5799998 9999999999999864 22 2222333332221 12 66666 332 35589999998
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.+++++..++|++++..|+|||++++.+...+..
T Consensus 118 -----~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 154 (234)
T 3dtn_A 118 -----SIHHLEDEDKKELYKRSYSILKESGIFINADLVHGET 154 (234)
T ss_dssp -----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred -----ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCC
Confidence 8899999999999999999999999999999877653
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.71 E-value=8.3e-05 Score=59.33 Aligned_cols=93 Identities=14% Similarity=0.202 Sum_probs=66.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..++++..++ |. +.....+... ...++++. ++ ++...|+++..+
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~d~~~~~~~~~fD~v~~~~----- 114 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEK-------LPKEFSITEGDFLSFEVPTSIDTIVSTY----- 114 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHH-------SCTTCCEESCCSSSCCCCSCCSEEEEES-----
T ss_pred CeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHh-------CCCceEEEeCChhhcCCCCCeEEEEECc-----
Confidence 5799998 9999999999874332 22 1111222211 11456665 33 235689999998
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++.+...+|++++..|+|||.+++.+...+.
T Consensus 115 ---~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 115 ---AFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp ---CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred ---chhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 789999999999999999999999999999866543
No 20
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.66 E-value=9.1e-05 Score=61.85 Aligned_cols=98 Identities=6% Similarity=0.056 Sum_probs=71.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee--cCCCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--YPNKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP~~AD~ylLk~m~~~P~ 146 (202)
.+++|+| |.|.++..++++++. + |. +.....+....+. .++.+++++. ++ +|...|+++...
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~--~~~~~~~~~~~~d~~~~~~~fD~v~~~~------ 137 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVAN--SENLRSKRVLLAGWEQFDEPVDRIVSIG------ 137 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT--CCCCSCEEEEESCGGGCCCCCSEEEEES------
T ss_pred CEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh--cCCCCCeEEEECChhhCCCCeeEEEEeC------
Confidence 4799998 999999999977654 1 21 2222333333322 2455677776 43 476689999988
Q ss_pred ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 147 QWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+.+++..++|++++..|+|||++++.+...+.
T Consensus 138 --~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 138 --AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp --CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred --chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 678888888899999999999999999999877553
No 21
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.64 E-value=7.5e-05 Score=63.62 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=69.5
Q ss_pred cceeecC-Ch---HHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec---------------
Q 044941 77 EAFADHQ-NA---QQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY--------------- 129 (202)
Q Consensus 77 ~~~~d~~-g~---G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff--------------- 129 (202)
..++|+| |. |.++..+++.+|.. |. +..+..+...+. -.++++++ +++
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA-----KDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT-----TCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC-----CCCCeEEEEeeCCCchhhhccchhhccC
Confidence 4799998 88 98888888888984 33 344444444332 12467776 442
Q ss_pred C-CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 130 P-NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 130 P-~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
+ ...|++++.. ++|.++|++..++|++++.+|+|||.|++.+...+
T Consensus 154 d~~~~d~v~~~~--------vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 154 DFSRPAAIMLVG--------MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp CTTSCCEEEETT--------TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred CCCCCEEEEEec--------hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 1 2468888777 88999999999999999999999999999997653
No 22
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.55 E-value=9.7e-05 Score=60.09 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=66.4
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMY 142 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~ 142 (202)
..+++|+| |.|.++..++++... + |. +..+..+..... .. .++++. ++ +| ...|+++..+
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~-- 166 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELA----GM-PVGKFILASMETATLPPNTYDLIVIQW-- 166 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTT----TS-SEEEEEESCGGGCCCCSSCEEEEEEES--
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhc----cC-CceEEEEccHHHCCCCCCCeEEEEEcc--
Confidence 35799998 999999999987522 2 11 112222222211 11 456665 32 23 3479999988
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++++..++|++++..|+|||.+++.+.....
T Consensus 167 ------~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 202 (254)
T 1xtp_A 167 ------TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTG 202 (254)
T ss_dssp ------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--
T ss_pred ------hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCc
Confidence 789999999999999999999999999999975543
No 23
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.52 E-value=0.00013 Score=59.37 Aligned_cols=93 Identities=10% Similarity=0.033 Sum_probs=67.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Cc---cccccccchhhhccCCCCCCceeee--eec----CC------Ccceeeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PN------KSCTLLIK 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~------~AD~ylLk 139 (202)
.+++|+| |.|.++..+++..+++ ++ +..+..+..... ..+++++ ++. +. ..|+++..
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCccEEEEc
Confidence 5799998 9999999999998864 22 122222322221 1256665 332 11 25788888
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
. ++|..++++..++|++++..|+|||++++++...+
T Consensus 132 ~--------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 132 T--------GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp S--------SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred c--------hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 7 77999999999999999999999999999997544
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.51 E-value=0.00025 Score=56.75 Aligned_cols=94 Identities=6% Similarity=-0.035 Sum_probs=67.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCC----ceeee--ee--cC---CCcceeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQ----RCSRV--HF--YP---NKSCTLLI 138 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~d----Rcs~v--hf--fP---~~AD~ylL 138 (202)
.+++|+| |.|.++..++++.|.. |. +.....+...++. .++.+ ++++. ++ .+ ...|+++.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDR--LRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTT--CCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHH--hcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 4799998 9999999999988752 22 2223333333322 13333 67776 32 22 35899998
Q ss_pred ehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 139 KNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
.+ ++|.+++++..++|++++..|+|||.+++..+
T Consensus 109 ~~--------~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 109 IE--------VIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp ES--------CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HH--------HHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 88 78999999999999999999999997777665
No 25
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.50 E-value=0.00021 Score=60.36 Aligned_cols=98 Identities=10% Similarity=0.147 Sum_probs=71.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee--cCCCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--YPNKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP~~AD~ylLk~m~~~P~ 146 (202)
.+++|+| |.|.++..+++.++. + |. +.....+....+.. ++.+++++. ++ ++...|+++...
T Consensus 74 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~fD~v~~~~------ 145 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV--DSPRRKEVRIQGWEEFDEPVDRIVSLG------ 145 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS--CCSSCEEEEECCGGGCCCCCSEEEEES------
T ss_pred CEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECCHHHcCCCccEEEEcc------
Confidence 5799998 999999999998763 1 22 22233344433322 566688877 33 356689999988
Q ss_pred ccccCCC-------CHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 147 QWVLTTW-------TDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 147 k~VLHdW-------~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+ ..++..++|++++..|+|||++++.+...+.
T Consensus 146 --~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 146 --AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp --CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred --hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 56777 4478899999999999999999999877654
No 26
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.45 E-value=0.00041 Score=58.93 Aligned_cols=99 Identities=9% Similarity=0.223 Sum_probs=71.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee--cCCCcceeeeehhcccc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP~~AD~ylLk~m~~~P 145 (202)
..+++|+| |.|.++..+++.+.. + |. +..+..+....+. .++.+++++. ++ +|...|+++...
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~~~~v~~~~~d~~~~~~~fD~v~~~~----- 163 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLAS--IDTNRSRQVLLQGWEDFAEPVDRIVSIE----- 163 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHT--SCCSSCEEEEESCGGGCCCCCSEEEEES-----
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCCCceEEEECChHHCCCCcCEEEEeC-----
Confidence 35799998 999999999988632 1 21 2222333333322 2455677776 43 376689999988
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++++..++|++++..|+|||++++.+...+.
T Consensus 164 ---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 164 ---AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ---CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ---hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 678888888999999999999999999999877654
No 27
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.43 E-value=0.00031 Score=56.13 Aligned_cols=94 Identities=9% Similarity=0.031 Sum_probs=66.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCC----ceeee--ee--cC---CCcceeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQ----RCSRV--HF--YP---NKSCTLLI 138 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~d----Rcs~v--hf--fP---~~AD~ylL 138 (202)
.+++|+| |.|.++..+++..|.. |. +.....+...+... ++.+ ++++. ++ .| ...|+++.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID--RLPEMQRKRISLFQSSLVYRDKRFSGYDAATV 108 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG--GSCHHHHTTEEEEECCSSSCCGGGTTCSEEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh--ccccccCcceEEEeCcccccccccCCCCEEEE
Confidence 4799998 9999999999988753 22 22233333332211 2332 67766 32 22 35899998
Q ss_pred ehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 139 KNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
.+ ++|.+++++..++|++++..|+|||.+++..+
T Consensus 109 ~~--------~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 109 IE--------VIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp ES--------CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HH--------HHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 88 78999999999999999999999997666554
No 28
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.43 E-value=9e-05 Score=63.03 Aligned_cols=97 Identities=11% Similarity=0.034 Sum_probs=69.7
Q ss_pred cceeecC-ChHHHHHHHH-HHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVA-QQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll-~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~ 142 (202)
..++|+| |.|.++..++ ..+|.. |. +.....|....+.. ++.+|++++ ++ ++...|+++...
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~fD~v~~~~-- 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--ALAGQITLHRQDAWKLDTREGYDLLTSNG-- 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--TTGGGEEEEECCGGGCCCCSCEEEEECCS--
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECchhcCCccCCeEEEEECC--
Confidence 4799998 9999999986 567764 22 23334444444332 566778887 43 355579999877
Q ss_pred ccccccccCCC-CHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 143 NVKFQWVLTTW-TDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 143 ~~P~k~VLHdW-~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
++|.+ +.+.+.++|++++..|+|||++++.+...+
T Consensus 196 ------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 196 ------LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp ------SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred ------hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 66777 566777899999999999999999886543
No 29
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.42 E-value=0.00028 Score=55.75 Aligned_cols=91 Identities=10% Similarity=0.044 Sum_probs=65.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccc---ccccccchhhhccCCCCCCceeee--e---ecC-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTE---HDKAHCPLHLKTGACRFGQRCSRV--H---FYP-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~---~d~~~~~~~~k~gacr~~dRcs~v--h---ffP-~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..++++..++ ++. .....+.. . + ..++++. + ++| ...|+++..+
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~---~---~-~~~~~~~~~d~~~~~~~~~~D~v~~~~----- 115 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR---H---G-LDNVEFRQQDLFDWTPDRQWDAVFFAH----- 115 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG---G---C-CTTEEEEECCTTSCCCSSCEEEEEEES-----
T ss_pred CeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh---c---C-CCCeEEEecccccCCCCCceeEEEEec-----
Confidence 4799998 9999999999884332 111 11111211 1 1 1456665 3 234 4579999988
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
++|.+++++...+|++++..|+|||.+++.+...
T Consensus 116 ---~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 116 ---WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp ---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ---hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 7899999999999999999999999999998644
No 30
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.39 E-value=0.00028 Score=57.47 Aligned_cols=95 Identities=11% Similarity=0.157 Sum_probs=68.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-Ccc---ccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++++.. + ++. .....+....+ .. .++++. ++ +| ...|+++..+
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 128 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVS----GN-NKIIFEANDILTKEFPENNFDLIYSRD--- 128 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCC----SC-TTEEEEECCTTTCCCCTTCEEEEEEES---
T ss_pred CEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhh----cC-CCeEEEECccccCCCCCCcEEEEeHHH---
Confidence 5799998 999999999998621 1 111 11122222111 11 567776 33 23 4579999988
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++++..++|++++..|+|||++++.+...+.
T Consensus 129 -----~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 129 -----AILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp -----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred -----HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 779999999999999999999999999999987665
No 31
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.29 E-value=0.00027 Score=59.24 Aligned_cols=98 Identities=10% Similarity=0.083 Sum_probs=69.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++.++. + |. +..+..+....+. .++.++++++ ++ || ...|+++..+
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 158 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQ--AGLADNITVKYGSFLEIPCEDNSYDFIWSQD--- 158 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH--HTCTTTEEEEECCTTSCSSCTTCEEEEEEES---
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHh--cCCCcceEEEEcCcccCCCCCCCEeEEEecc---
Confidence 5799998 999999999998642 1 22 1222333333322 1455678877 33 23 3479999888
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDS 186 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~ 186 (202)
++|.+.+ ..++|++++..|+|||++++.+.......
T Consensus 159 -----~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 194 (297)
T 2o57_A 159 -----AFLHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGI 194 (297)
T ss_dssp -----CGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTC
T ss_pred -----hhhhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCC
Confidence 6778877 68999999999999999999998766543
No 32
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.28 E-value=0.00043 Score=56.43 Aligned_cols=95 Identities=12% Similarity=0.039 Sum_probs=67.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++.+|. + |. +.....+....+.. ++.+|++++ ++ +| ...|+++..+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 122 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA--NCADRVKGITGSMDNLPFQNEELDLIWSEG--- 122 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCSSCTTCEEEEEEES---
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChhhCCCCCCCEEEEEecC---
Confidence 4799998 999999999999984 2 22 22233333333322 566778887 33 23 4579999988
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.++ ..++|++++..|+|||++++.+.....
T Consensus 123 -----~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 123 -----AIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp -----CSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred -----hHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 667774 457899999999999999999975433
No 33
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.25 E-value=0.00023 Score=58.04 Aligned_cols=97 Identities=10% Similarity=0.068 Sum_probs=67.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cCC-Ccceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPN-KSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~-~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..++++... + |. +..+..+....... + ..++.+. ++ ++. ..|++++.+
T Consensus 81 ~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 154 (241)
T 2ex4_A 81 SCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE--G-KRVRNYFCCGLQDFTPEPDSYDVIWIQW--- 154 (241)
T ss_dssp SEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG--G-GGEEEEEECCGGGCCCCSSCEEEEEEES---
T ss_pred CEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhc--C-CceEEEEEcChhhcCCCCCCEEEEEEcc---
Confidence 5799998 999999999887632 1 21 12222233222211 1 2345555 32 233 479999987
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++++..++|++++..|+|||++++.+.....
T Consensus 155 -----~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 190 (241)
T 2ex4_A 155 -----VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE 190 (241)
T ss_dssp -----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS
T ss_pred -----hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC
Confidence 789999999999999999999999999999876653
No 34
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.25 E-value=0.00017 Score=57.53 Aligned_cols=93 Identities=9% Similarity=0.002 Sum_probs=66.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++..|++ |. +.....+....+. .+.+++++ ++ +| ...|+++..+
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---- 111 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKS----RESNVEFIVGDARKLSFEDKTFDYVIFID---- 111 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCCEEEECCTTSCCSCTTCEEEEEEES----
T ss_pred CeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh----cCCCceEEECchhcCCCCCCcEEEEEEcC----
Confidence 5799998 9999999999988864 22 2223333333321 12456665 33 23 3579999887
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|.+..++..++|++++..|+|||++++.+.-
T Consensus 112 ----~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 112 ----SIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ----CGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----chHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 667777888999999999999999999988753
No 35
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.20 E-value=0.00012 Score=59.29 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=68.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec---C-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++....+ |. +..+..+....+. .+..+++++. ++. | ...|+++...
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~----- 140 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGS--SPKAEYFSFVKEDVFTWRPTELFDLIFDYV----- 140 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTT--SGGGGGEEEECCCTTTCCCSSCEEEEEEES-----
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhc--cCCCcceEEEECchhcCCCCCCeeEEEECh-----
Confidence 3799998 9999999887632222 22 2222333333321 1344578777 432 3 3579999887
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++++..++|++++..|+|||++++++.-...
T Consensus 141 ---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 176 (235)
T 3lcc_A 141 ---FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITD 176 (235)
T ss_dssp ---STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSC
T ss_pred ---hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccc
Confidence 779999999999999999999999999998865543
No 36
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.16 E-value=0.0002 Score=60.88 Aligned_cols=54 Identities=22% Similarity=0.438 Sum_probs=40.4
Q ss_pred Cceeee--eec----------CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 121 QRCSRV--HFY----------PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 121 dRcs~v--hff----------P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
+++++. ++. +...|+++..+++. |+-.+|+++...++|++++..|+|||+|++-
T Consensus 154 ~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~----~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 154 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTK----WVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp TTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHH----HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEecccccCccccccccCCCcCEEEEChHHH----HhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 577777 332 24579999887331 1223789999999999999999999998774
No 37
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.15 E-value=0.00033 Score=57.58 Aligned_cols=95 Identities=14% Similarity=0.217 Sum_probs=66.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++..+++ |. +..+..+....+.. ++ .+++++ ++ || ...|+++...
T Consensus 39 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~v~~~~~d~~~l~~~~~~fD~V~~~~---- 111 (260)
T 1vl5_A 39 EEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGN--GH-QQVEYVQGDAEQMPFTDERFHIVTCRI---- 111 (260)
T ss_dssp CEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT--TC-CSEEEEECCC-CCCSCTTCEEEEEEES----
T ss_pred CEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc--CC-CceEEEEecHHhCCCCCCCEEEEEEhh----
Confidence 4799998 9999999999988754 22 22233333332211 12 246665 32 34 4579999887
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.|+|. ...|++++..|+|||++++.+...+.
T Consensus 112 ----~l~~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (260)
T 1vl5_A 112 ----AAHHFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPE 145 (260)
T ss_dssp ----CGGGCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCS
T ss_pred ----hhHhcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCC
Confidence 77888765 48999999999999999999877654
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.14 E-value=0.00024 Score=55.92 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=65.1
Q ss_pred ceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 78 AFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 78 ~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
+++|+| |.|.++..++++ |.. |. +.....+....+.. ++.+++++. ++ +| ...|+++..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~--- 119 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA--NLNDRIQIVQGDVHNIPIEDNYADLIVSRG--- 119 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECBTTBCSSCTTCEEEEEEES---
T ss_pred EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc--cccCceEEEEcCHHHCCCCcccccEEEECc---
Confidence 799998 999999999998 552 22 22233344433322 455678776 33 24 4479999988
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
++|.+.+ ..++|++++..|+|||++++.+...+
T Consensus 120 -----~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 120 -----SVFFWED--VATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp -----CGGGCSC--HHHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred -----hHhhccC--HHHHHHHHHHhCCCCCEEEEEeccCc
Confidence 6777744 56799999999999999999875443
No 39
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.09 E-value=0.00066 Score=55.92 Aligned_cols=97 Identities=10% Similarity=0.083 Sum_probs=67.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++++.. + |. +.....+....+. .++.+++++. ++ +| ...|+++..+
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 137 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATA--AGLANRVTFSYADAMDLPFEDASFDAVWALE--- 137 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHH--TTCTTTEEEEECCTTSCCSCTTCEEEEEEES---
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHh--cCCCcceEEEECccccCCCCCCCccEEEEec---
Confidence 5799998 999999999988743 1 21 2222333333322 2456678877 33 23 3479999888
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.+.+. .++|++++..|+|||++++.+......
T Consensus 138 -----~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~ 172 (273)
T 3bus_A 138 -----SLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAP 172 (273)
T ss_dssp -----CTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSC
T ss_pred -----hhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCC
Confidence 66777655 689999999999999999999876543
No 40
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.07 E-value=0.00041 Score=56.52 Aligned_cols=97 Identities=13% Similarity=-0.028 Sum_probs=67.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++.+.. + |. +.....+....+. .++.++++++ ++. +...|+++...
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~--~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~---- 111 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEE--LGVSERVHFIHNDAAGYVANEKCDVAACVG---- 111 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHH--TTCTTTEEEEESCCTTCCCSSCEEEEEEES----
T ss_pred CEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHh--cCCCcceEEEECChHhCCcCCCCCEEEECC----
Confidence 5799998 999999999998742 1 22 2223333333322 2455678877 332 34579999877
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.+++ ..+.|++++..|+|||++++.+......
T Consensus 112 ----~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~ 146 (256)
T 1nkv_A 112 ----ATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQL 146 (256)
T ss_dssp ----CGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTC
T ss_pred ----ChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCC
Confidence 6777764 5788999999999999999998765543
No 41
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.05 E-value=0.00057 Score=56.53 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=63.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~ 142 (202)
.+++|+| |.|.++..+++.+|.. |. +.....+....... +. .++++. +. +| ...|+++..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~-- 113 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN--GI-KNVKFLQANIFSLPFEDSSFDHIFVCF-- 113 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT--TC-CSEEEEECCGGGCCSCTTCEEEEEEES--
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEcccccCCCCCCCeeEEEEec--
Confidence 5799998 9999999999998874 22 22223333333221 12 246665 32 23 4579999988
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.++|.+ .+|++++..|+|||.+++.+.
T Consensus 114 ------~l~~~~~~~--~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 114 ------VLEHLQSPE--EALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp ------CGGGCSCHH--HHHHHHHHHEEEEEEEEEEEE
T ss_pred ------hhhhcCCHH--HHHHHHHHHcCCCcEEEEEEc
Confidence 678887664 889999999999999999884
No 42
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.04 E-value=0.00082 Score=53.49 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=65.5
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhcc--CCCCCCceeee--ee----cC-CCcceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTG--ACRFGQRCSRV--HF----YP-NKSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~g--acr~~dRcs~v--hf----fP-~~AD~ylLk~m 141 (202)
..+++|+| |.|.++..++++.-++ |. +.....+....+.. .....+++++. ++ ++ ...|++++.+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~- 109 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA- 109 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES-
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc-
Confidence 35799998 9999999999873332 22 12222233222211 00123456665 32 23 4479999987
Q ss_pred cccccccccCCCC-HHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 142 YNVKFQWVLTTWT-DDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 142 ~~~P~k~VLHdW~-Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
++|.+. .++..++|++++..|+|||++++.+....
T Consensus 110 -------~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 110 -------FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp -------CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred -------hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 677775 56688999999999999999999986543
No 43
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.98 E-value=0.00045 Score=55.29 Aligned_cols=87 Identities=11% Similarity=0.164 Sum_probs=60.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccccc---ccccchhhhccCCCCCCceeee--e---ecC-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHD---KAHCPLHLKTGACRFGQRCSRV--H---FYP-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d---~~~~~~~~k~gacr~~dRcs~v--h---ffP-~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++..+++ ++... ...+... ...+++++ + ++| ...|++++.+
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------~~~~v~~~~~d~~~~~~~~~fD~v~~~~----- 111 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGR-------LKDGITYIHSRFEDAQLPRRYDNIVLTH----- 111 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHH-------SCSCEEEEESCGGGCCCSSCEEEEEEES-----
T ss_pred CcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHh-------hhCCeEEEEccHHHcCcCCcccEEEEhh-----
Confidence 4699998 9999999999988764 22211 1222211 11155555 2 233 4579999998
Q ss_pred cccccCCCCHHHHHHHHHHHH-hhCCCCCEEEEeee
Q 044941 146 FQWVLTTWTDDECKLIMENCY-KALPAGGKLIACEP 180 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~-~AL~~gGrLlI~E~ 180 (202)
++|.+.|. .++|++++ ..|+|||++++.+.
T Consensus 112 ---~l~~~~~~--~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 112 ---VLEHIDDP--VALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ---CGGGCSSH--HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---HHHhhcCH--HHHHHHHHHHhcCCCCEEEEEcC
Confidence 77777665 68999999 99999999998764
No 44
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.95 E-value=0.00066 Score=53.46 Aligned_cols=91 Identities=12% Similarity=-0.037 Sum_probs=63.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Ccc-ccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTE-HDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~-~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..++++..++ |.. .....+... ..+++++ ++ +| ...|+++..+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~---- 110 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWY---- 110 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEES----
T ss_pred CeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehh----
Confidence 5799998 9999999999874442 221 111112111 1245555 32 23 4579999988
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
++|.++.++..++|++++..|+|||++++.....+
T Consensus 111 ----~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 111 ----SLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp ----SSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred ----hHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 78899988999999999999999999998875443
No 45
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.94 E-value=0.00063 Score=55.34 Aligned_cols=89 Identities=11% Similarity=0.125 Sum_probs=60.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCCCCccccccccchhhhccCCCCCCceeee--e---e---cC-CCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPLHLKTGACRFGQRCSRV--H---F---YP-NKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~~~k~gacr~~dRcs~v--h---f---fP-~~AD~ylLk~m~~~P~ 146 (202)
.+++|+| |.|.++..+++...++ ......+..++.. + .++++. + + +| ...|+++..+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v---~gvD~s~~~~~~a--~--~~~~~~~~d~~~~~~~~~~~~fD~i~~~~------ 109 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIES---IGVDINEDMIKFC--E--GKFNVVKSDAIEYLKSLPDKYLDGVMISH------ 109 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCCE---EEECSCHHHHHHH--H--TTSEEECSCHHHHHHTSCTTCBSEEEEES------
T ss_pred CeEEEEeCCCCHHHHHHHhCCCcE---EEEECCHHHHHHH--H--hhcceeeccHHHHhhhcCCCCeeEEEECC------
Confidence 5799998 9999999998875443 1111111111110 0 013333 2 1 34 4579999988
Q ss_pred ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 147 QWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.+++++...+|++++..|+|||++++...
T Consensus 110 --~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 110 --FVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp --CGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred --chhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 77899999999999999999999999988654
No 46
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=96.93 E-value=0.00041 Score=58.30 Aligned_cols=91 Identities=14% Similarity=0.119 Sum_probs=64.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~ 142 (202)
.+++|+| |.|.++..+++.+|. . |. +.....+..... ..+.++++. ++ ++...|+++..+
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~----~~~~~v~~~~~d~~~~~~~~~fD~v~~~~-- 97 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFR----LLPYDSEFLEGDATEIELNDKYDIAICHA-- 97 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHH----SSSSEEEEEESCTTTCCCSSCEEEEEEES--
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH----hcCCceEEEEcchhhcCcCCCeeEEEECC--
Confidence 5799998 999999999999985 2 21 112222222222 123367776 33 245689999988
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|.++|. .++|++++..|+|||.+++.+.-
T Consensus 98 ------~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 ------FLLHMTTP--ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ------CGGGCSSH--HHHHHHHHHTEEEEEEEEEEECC
T ss_pred ------hhhcCCCH--HHHHHHHHHHcCCCCEEEEEecc
Confidence 66777655 48999999999999999998854
No 47
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.90 E-value=0.001 Score=56.55 Aligned_cols=97 Identities=5% Similarity=0.053 Sum_probs=68.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMY 142 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~ 142 (202)
..+++|+| |.|.++..+++++.. + |. +..+..+....+.. ++.+++++. ++ +| ...|+++...
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-- 193 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL--RIDDHVRSRVCNMLDTPFDKGAVTASWNNE-- 193 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCCCTTCEEEEEEES--
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCceEEEECChhcCCCCCCCEeEEEECC--
Confidence 35799998 999999999998522 1 22 22233344333322 456678887 33 23 4579999887
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.++ ..++|++++..|+|||++++++......
T Consensus 194 ------~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 227 (312)
T 3vc1_A 194 ------STMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPR 227 (312)
T ss_dssp ------CGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTT
T ss_pred ------chhhCC---HHHHHHHHHHHcCCCcEEEEEEcccccc
Confidence 667774 8899999999999999999999776653
No 48
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.88 E-value=0.00081 Score=56.06 Aligned_cols=93 Identities=12% Similarity=0.056 Sum_probs=63.6
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee-----c-CCCcceeeeehhc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF-----Y-PNKSCTLLIKNMY 142 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf-----f-P~~AD~ylLk~m~ 142 (202)
..+++|+| |.|.++..+++...++ |. +..+..+....+.. ++.++++++ ++ + +...|+++..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-- 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK--GVSDNMQFIHCAAQDVASHLETPVDLILFHA-- 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC---CCGGGEEEEESCGGGTGGGCSSCEEEEEEES--
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCcceEEEEcCHHHhhhhcCCCceEEEECc--
Confidence 35799998 9999999999873332 22 22233333333321 444677776 32 2 34589999988
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.+++. .++|++++..|+|||.+++...
T Consensus 145 ------~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 145 ------VLEWVADP--RSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp ------CGGGCSCH--HHHHHHHHHTEEEEEEEEEEEE
T ss_pred ------hhhcccCH--HHHHHHHHHHcCCCeEEEEEEe
Confidence 66777655 6799999999999999988764
No 49
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.86 E-value=0.00046 Score=56.36 Aligned_cols=97 Identities=9% Similarity=0.147 Sum_probs=66.1
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
...++|+| |.|.++..+++..+++ |. +.....+....+.. ++ .++++. ++ ++ ...|+++..+
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~v~~~~~d~~~~~~~~~~fD~v~~~~--- 95 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEK--GV-ENVRFQQGTAESLPFPDDSFDIITCRY--- 95 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH--TC-CSEEEEECBTTBCCSCTTCEEEEEEES---
T ss_pred CCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--CC-CCeEEEecccccCCCCCCcEEEEEECC---
Confidence 35799998 9999999999988764 22 22222333322211 11 245555 32 33 4479999887
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.|.| ..++|++++..|+|||++++.+...+..
T Consensus 96 -----~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 130 (239)
T 1xxl_A 96 -----AAHHFSD--VRKAVREVARVLKQDGRFLLVDHYAPED 130 (239)
T ss_dssp -----CGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSS
T ss_pred -----chhhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCC
Confidence 7788875 4688999999999999999999876543
No 50
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.84 E-value=0.0008 Score=56.71 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=65.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..++++.-++ |. +..+..+..........+.++++++ ++. +...|++++...
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~---- 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSG---- 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHH----
T ss_pred CcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCc----
Confidence 3799998 9999999999874332 22 2222333333221100011577776 432 455798886642
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|.+++++..++|++++..|+|||+|++....
T Consensus 160 ---~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 160 ---SINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ---HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 678888899999999999999999999886543
No 51
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.84 E-value=0.00098 Score=52.88 Aligned_cols=88 Identities=15% Similarity=0.078 Sum_probs=60.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee--c--CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--Y--PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--f--P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..++++...+ |. +.....+.... ++++. ++ + +...|+++..+
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~~~~~fD~v~~~~----- 110 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL---------GRPVRTMLFHQLDAIDAYDAVWAHA----- 110 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCCCCSCEEEEEECS-----
T ss_pred CcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc---------CCceEEeeeccCCCCCcEEEEEecC-----
Confidence 5799998 9999999999873332 11 11112222111 12222 32 2 24579999988
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|.+++++..++|++++..|+|||++++....
T Consensus 111 ---~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 111 ---CLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp ---CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 789999999999999999999999999887543
No 52
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.82 E-value=0.00048 Score=53.56 Aligned_cols=98 Identities=10% Similarity=0.001 Sum_probs=66.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++..-++ |. +.....+....+.. ++ .++++. ++. +...|+++..+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~~~~~~d~~~~~~~~~~D~v~~~~----- 105 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE--NL-DNLHTRVVDLNNLTFDRQYDFILSTV----- 105 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--TC-TTEEEEECCGGGCCCCCCEEEEEEES-----
T ss_pred CeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC--CC-CCcEEEEcchhhCCCCCCceEEEEcc-----
Confidence 4799998 9999999998862222 21 22223333322211 12 235554 321 34579999888
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.+++++..++|++++..|+|||++++++.+..+.
T Consensus 106 ---~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 142 (199)
T 2xvm_A 106 ---VLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTAD 142 (199)
T ss_dssp ---CGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSS
T ss_pred ---hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCC
Confidence 7788888889999999999999999999988776543
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=96.81 E-value=0.0014 Score=54.10 Aligned_cols=96 Identities=11% Similarity=0.032 Sum_probs=66.6
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m 141 (202)
..+++|+| |.|.++..+++. |.. |. +.....+....+.. ++.++++++ ++ +| ...|+++..+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~- 122 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS--GLQNRVTGIVGSMDDLPFRNEELDLIWSEG- 122 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCCCTTCEEEEEESS-
T ss_pred CCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc--CCCcCcEEEEcChhhCCCCCCCEEEEEEcC-
Confidence 35799998 999999999987 542 22 22233334333322 556778887 33 23 3479999888
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.++ ..++|++++..|+|||++++.+......
T Consensus 123 -------~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 156 (267)
T 3kkz_A 123 -------AIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTD 156 (267)
T ss_dssp -------CGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSS
T ss_pred -------CceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCC
Confidence 556663 4678999999999999999999865443
No 54
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.81 E-value=0.0044 Score=50.96 Aligned_cols=97 Identities=11% Similarity=0.063 Sum_probs=65.3
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC-----Cccc-------cccccchhhhccCCCCCCceeee--e-ec------C-CC
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF-----GTEH-------DKAHCPLHLKTGACRFGQRCSRV--H-FY------P-NK 132 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l-----dl~~-------d~~~~~~~~k~gacr~~dRcs~v--h-ff------P-~~ 132 (202)
.+++|+| |.|.++..+++++ |+. |... ....+...++.. ++.+++++. + ++ | ..
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--PLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--TTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--CCCCceEEEECChhhhccCCCCCCC
Confidence 4799998 9999999999986 642 3222 233343333322 344577766 4 21 3 34
Q ss_pred cceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 133 SCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 133 AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
.|+++..+ ++|.+.+.+. +++.++..+++||++++.+...+..
T Consensus 123 fD~v~~~~--------~l~~~~~~~~--~~~~~~~l~~~gG~l~~~~~~~~~~ 165 (275)
T 3bkx_A 123 FDRVVLAH--------SLWYFASANA--LALLFKNMAAVCDHVDVAEWSMQPT 165 (275)
T ss_dssp CSEEEEES--------CGGGSSCHHH--HHHHHHHHTTTCSEEEEEEECSSCS
T ss_pred EEEEEEcc--------chhhCCCHHH--HHHHHHHHhCCCCEEEEEEecCCCC
Confidence 79999888 6677777653 6666666667799999999877654
No 55
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.80 E-value=0.0011 Score=55.40 Aligned_cols=97 Identities=10% Similarity=0.006 Sum_probs=66.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhccc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYNV 144 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~~ 144 (202)
..+++|+| |.|.++..+++..-++ |. +..+..+...... .+.++++. ++. +...|+++...
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~fD~i~~~~---- 192 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEK----ENLNISTALYDINAANIQENYDFIVSTV---- 192 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCGGGCCCCSCEEEEEECS----
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHH----cCCceEEEEeccccccccCCccEEEEcc----
Confidence 35799998 9999999999873332 21 1222233333221 12256665 332 34589999988
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.+++++..++|++++..|+|||.++++...-.+
T Consensus 193 ----~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 228 (286)
T 3m70_A 193 ----VFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTD 228 (286)
T ss_dssp ----SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred ----chhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 778889999999999999999999998887765544
No 56
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.77 E-value=0.0011 Score=52.55 Aligned_cols=96 Identities=9% Similarity=-0.039 Sum_probs=65.8
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m 141 (202)
.+++|+| |.|.++..+++.. |.. |. +.....+....+.. ++. ++++. ++ ++ ...|+++..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~- 114 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL--GLK-NVEVLKSEENKIPLPDNTVDFIFMAF- 114 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--TCT-TEEEEECBTTBCSSCSSCEEEEEEES-
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CCC-cEEEEecccccCCCCCCCeeEEEeeh-
Confidence 4799998 9999999999987 553 22 22233333333221 222 56665 32 23 3479999988
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.+.+ ...+|++++..|+|||++++.+......
T Consensus 115 -------~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 149 (219)
T 3dh0_A 115 -------TFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEER 149 (219)
T ss_dssp -------CGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCC
T ss_pred -------hhhhcCC--HHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 6777764 4789999999999999999998765543
No 57
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.76 E-value=0.00062 Score=54.14 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=62.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec---C-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++...++ |. +.....+....+ ...++++. ++. | ...|+++..+
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~~d~~~~~~~~~fD~v~~~~----- 122 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTK-----RWSHISWAATDILQFSTAELFDLIVVAE----- 122 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTT-----TCSSEEEEECCTTTCCCSCCEEEEEEES-----
T ss_pred CcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcc-----cCCCeEEEEcchhhCCCCCCccEEEEcc-----
Confidence 5799998 9999999999876443 21 122222332221 12256666 332 3 4579999988
Q ss_pred cccccCCCCH-HHHHHHHHHHHhhCCCCCEEEEee
Q 044941 146 FQWVLTTWTD-DECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 146 ~k~VLHdW~D-ee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++|.+.+ ++..++|++++..|+|||.+++..
T Consensus 123 ---~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 123 ---VLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ---CGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---HHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 7788875 677899999999999999998865
No 58
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.66 E-value=0.0034 Score=47.94 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=60.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--e---ecC---CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--H---FYP---NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--h---ffP---~~AD~ylLk~m 141 (202)
.+++|+| |.|.++..+++.+|.. |. +.....+....+.. ++.+++ +. + .+| ...|++++..
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~- 102 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--GVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG- 102 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--TCTTSE-EEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--CCCCCE-EEecchHhhhhccCCCCCEEEECC-
Confidence 5799998 9999999999998873 32 22233444433322 444466 43 2 233 4589998887
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
.+|. .++|+++++.|+|||++++.....
T Consensus 103 -------~~~~------~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 103 -------GLTA------PGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp --------TTC------TTHHHHHHHTCCTTCEEEEEECSH
T ss_pred -------cccH------HHHHHHHHHhcCCCCEEEEEeecc
Confidence 4444 789999999999999998877543
No 59
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.62 E-value=0.0017 Score=56.56 Aligned_cols=95 Identities=11% Similarity=0.114 Sum_probs=65.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeeeeec---CCCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRVHFY---PNKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~vhff---P~~AD~ylLk~m~~~P~ 146 (202)
.+++|+| |.|.++..+++.+|+. |. +.....+....+.. ++..++...+++ +...|+++...
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~--~~~~~~~~~d~~~~~~~~fD~Iv~~~------ 269 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN--GVEGEVFASNVFSEVKGRFDMIISNP------ 269 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT--TCCCEEEECSTTTTCCSCEEEEEECC------
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh--CCCCEEEEccccccccCCeeEEEECC------
Confidence 4799998 9999999999999873 22 22233344433221 232333222433 44579998876
Q ss_pred ccccCC---CCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 147 QWVLTT---WTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 147 k~VLHd---W~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|. ++.+...++|++++..|+|||+++++.+-
T Consensus 270 --~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 270 --PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp --CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred --CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 4564 56788899999999999999999988753
No 60
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.62 E-value=0.0012 Score=53.82 Aligned_cols=86 Identities=12% Similarity=0.020 Sum_probs=59.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++..+. + |. +.....+.... . ..++++. ++ +| ...|+++..+
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~-----~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 116 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKT-----T-SPVVCYEQKAIEDIAIEPDAYNVVLSSL--- 116 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHC-----C-CTTEEEEECCGGGCCCCTTCEEEEEEES---
T ss_pred CEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhh-----c-cCCeEEEEcchhhCCCCCCCeEEEEEch---
Confidence 5799998 999999999998763 2 22 11122222221 1 3466665 32 23 4579999998
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
++|.+.+ ..++|++++..|+|||++++.
T Consensus 117 -----~l~~~~~--~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 117 -----ALHYIAS--FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp -----CGGGCSC--HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----hhhhhhh--HHHHHHHHHHHcCCCcEEEEE
Confidence 6777744 678999999999999999886
No 61
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.57 E-value=0.0015 Score=52.36 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=62.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec----CCCcceee-eehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLL-IKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~yl-Lk~m~~~ 144 (202)
.+++|+| |.|.++..+++..+++ |. +.....+.... .++++. ++. +...|+++ ..+
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~D~v~~~~~---- 109 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFRLGRKFSAVVSMFS---- 109 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCCCSSCEEEEEECTT----
T ss_pred CeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHcccCCCCcEEEEcCc----
Confidence 5799998 9999999999988754 22 11222222111 234544 321 34579888 444
Q ss_pred cccccc-CCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 145 KFQWVL-TTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 145 P~k~VL-HdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++ |-.+.++..++|+++++.|+|||++++.+...++
T Consensus 110 ----~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 110 ----SVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp ----GGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred ----hHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 34 4456789999999999999999999988765554
No 62
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=96.47 E-value=0.0015 Score=53.70 Aligned_cols=92 Identities=9% Similarity=0.020 Sum_probs=61.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee--c--CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--Y--PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--f--P~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..++++.+++ |. +..+..|.... .+++++ ++ + +...|+++...-
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~fD~v~~~~~---- 119 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN--------PDAVLHHGDMRDFSLGRRFSAVTCMFS---- 119 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTCCCSCCEEEEEECTT----
T ss_pred CcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC--------CCCEEEECChHHCCccCCcCEEEEcCc----
Confidence 5799998 9999999999886653 22 11122222111 145555 33 2 455799988740
Q ss_pred cccccCCC-CHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 146 FQWVLTTW-TDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 146 ~k~VLHdW-~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
++|.+ +.++..++|++++..|+|||.+++.+...+
T Consensus 120 ---~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 120 ---SIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp ---GGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred ---hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 34444 557889999999999999999988654333
No 63
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.47 E-value=0.0036 Score=50.19 Aligned_cols=96 Identities=6% Similarity=-0.021 Sum_probs=60.7
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhcc-------C--CCCCCceeee--eec--C----CCc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTG-------A--CRFGQRCSRV--HFY--P----NKS 133 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~g-------a--cr~~dRcs~v--hff--P----~~A 133 (202)
..++.|+| |.|.++..++++--++ |. +..+..+....+.. . .....+++++ +++ | ...
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~f 102 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHC 102 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSE
T ss_pred CCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCE
Confidence 35799998 9999999999873222 21 12222232211100 0 0012466666 443 3 347
Q ss_pred ceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 134 CTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 134 D~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
|+++... ++|..++++..+.+++++..|+|||+++++-
T Consensus 103 D~v~~~~--------~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 103 AAFYDRA--------AMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp EEEEEES--------CGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEECc--------chhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9998876 5677788888899999999999999954443
No 64
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.43 E-value=0.0044 Score=57.25 Aligned_cols=100 Identities=14% Similarity=0.207 Sum_probs=66.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Ccccc---ccccchhhh-----ccCCCC-CCceeee--eec--C-----CCcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTEHD---KAHCPLHLK-----TGACRF-GQRCSRV--HFY--P-----NKSC 134 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~~d---~~~~~~~~k-----~gacr~-~dRcs~v--hff--P-----~~AD 134 (202)
..|+|+| |.|.++..+++.++.- |+... ...+....+ ....++ .++++++ |++ | ..+|
T Consensus 175 d~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aD 254 (438)
T 3uwp_A 175 DLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTS 254 (438)
T ss_dssp CEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCS
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCcc
Confidence 4699998 9999999999887752 22221 122221110 000123 2688887 553 2 2478
Q ss_pred eeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 135 TLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 135 ~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
++++.+ .++ ..+..+.|++++..|+|||+|++.|.+.+++..
T Consensus 255 VVf~Nn--------~~F---~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~ 296 (438)
T 3uwp_A 255 VIFVNN--------FAF---GPEVDHQLKERFANMKEGGRIVSSKPFAPLNFR 296 (438)
T ss_dssp EEEECC--------TTC---CHHHHHHHHHHHTTSCTTCEEEESSCSSCTTCC
T ss_pred EEEEcc--------ccc---CchHHHHHHHHHHcCCCCcEEEEeecccCCCCC
Confidence 888766 333 256677788999999999999999999987654
No 65
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=96.41 E-value=0.0029 Score=50.86 Aligned_cols=92 Identities=10% Similarity=0.015 Sum_probs=59.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNVKFQ 147 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~P~k 147 (202)
.+++|+| |.|.++..++++..++ ++........ ..+.. ....+++++ ++ +| ...|+++..+
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~-~a~~~--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~------- 124 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQ-KGKER--GEGPDLSFIKGDLSSLPFENEQFEAIMAIN------- 124 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHH-HHHTT--TCBTTEEEEECBTTBCSSCTTCEEEEEEES-------
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHH-HHHhh--cccCCceEEEcchhcCCCCCCCccEEEEcC-------
Confidence 5799998 9999999999874332 1111111111 11111 123456665 32 23 4579999988
Q ss_pred cccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 148 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 148 ~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|.+.+. .++|++++..|+|||++++.+.-
T Consensus 125 -~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 125 -SLEWTEEP--LRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp -CTTSSSCH--HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -hHhhccCH--HHHHHHHHHHhCCCeEEEEEEcC
Confidence 77777554 48899999999999999988743
No 66
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.37 E-value=0.011 Score=46.64 Aligned_cols=89 Identities=11% Similarity=0.007 Sum_probs=60.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m~ 142 (202)
..++|+| |.|.++..+++..|.. |. +.....+....+.. ++ +++++. ++ ++ ...|++++..
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~v~~~~~d~~~~~~~~~~~D~i~~~~-- 116 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF--VA-RNVTLVEAFAPEGLDDLPDPDRVFIGG-- 116 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--TC-TTEEEEECCTTTTCTTSCCCSEEEESC--
T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--CC-CcEEEEeCChhhhhhcCCCCCEEEECC--
Confidence 5799998 9999999999999873 22 22233343333221 23 567766 33 22 3478887775
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
.++ +..++|+++++.|+|||++++....
T Consensus 117 ------~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 117 ------SGG-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp ------CTT-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred ------CCc-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 333 5668999999999999999987644
No 67
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=96.32 E-value=0.0015 Score=49.93 Aligned_cols=91 Identities=10% Similarity=0.047 Sum_probs=62.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--e-ecC-CCcceeeeehhcccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--H-FYP-NKSCTLLIKNMYNVKFQ 147 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--h-ffP-~~AD~ylLk~m~~~P~k 147 (202)
.+++|+| |.|.++..+++...++ |. +.....+... ..++++. + .+| ...|+++..+
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d~~~~~~~~D~v~~~~------- 83 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK--------FDSVITLSDPKEIPDNSVDFILFAN------- 83 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH--------CTTSEEESSGGGSCTTCEEEEEEES-------
T ss_pred CeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh--------CCCcEEEeCCCCCCCCceEEEEEcc-------
Confidence 5799998 9999999999876432 21 1111112111 2355555 3 234 4589999988
Q ss_pred cccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 148 WVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 148 ~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|.+.+ ...+|+++++.|+|||++++.+......
T Consensus 84 -~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 118 (170)
T 3i9f_A 84 -SFHDMDD--KQHVISEVKRILKDDGRVIIIDWRKENT 118 (170)
T ss_dssp -CSTTCSC--HHHHHHHHHHHEEEEEEEEEEEECSSCC
T ss_pred -chhcccC--HHHHHHHHHHhcCCCCEEEEEEcCcccc
Confidence 7788864 4689999999999999999998765543
No 68
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.31 E-value=0.0041 Score=51.40 Aligned_cols=93 Identities=10% Similarity=0.019 Sum_probs=62.9
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---Cc-cccccccchhhhccCCCCCCceeee--ee----c-C-CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----Y-P-NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----f-P-~~AD~ylLk~m~ 142 (202)
.+++|+| |.|.++..+++... ++ |. +.....|....+.. +...++++. ++ + + ...|+++...
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~-- 141 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM--KRRFKVFFRAQDSYGRHMDLGKEFDVISSQF-- 141 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS--CCSSEEEEEESCTTTSCCCCSSCEEEEEEES--
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc--CCCccEEEEECCccccccCCCCCcCEEEECc--
Confidence 5799998 88988888777632 22 22 22233333333221 344567766 32 2 2 3479999887
Q ss_pred ccccccccCC--CCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 143 NVKFQWVLTT--WTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 143 ~~P~k~VLHd--W~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++|. .+.++..++|++++..|+|||++++..
T Consensus 142 ------~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 142 ------SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp ------CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6676 678889999999999999999998775
No 69
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=96.20 E-value=0.014 Score=48.12 Aligned_cols=89 Identities=6% Similarity=0.000 Sum_probs=58.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCCCccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNVKFQW 148 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~P~k~ 148 (202)
.+++|+| |.|.++..+++ |.. ...-....+..+... +-..++++. ++ +| ...|+++..+
T Consensus 36 ~~vLDiGcG~G~~~~~l~~--~~~-~v~gvD~s~~~~~~a--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-------- 102 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALAN--QGL-FVYAVEPSIVMRQQA--VVHPQVEWFTGYAENLALPDKSVDGVISIL-------- 102 (261)
T ss_dssp CEEEEETCTTSHHHHHHHT--TTC-EEEEECSCHHHHHSS--CCCTTEEEECCCTTSCCSCTTCBSEEEEES--------
T ss_pred CEEEEEcCcccHHHHHHHh--CCC-EEEEEeCCHHHHHHH--HhccCCEEEECchhhCCCCCCCEeEEEEcc--------
Confidence 5799998 99999999987 332 111111222222211 111156665 32 34 4579999998
Q ss_pred ccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 149 VLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 149 VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++|.+.| ..++|++++..|+ ||++++++.-
T Consensus 103 ~l~~~~~--~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 103 AIHHFSH--LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp CGGGCSS--HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred hHhhccC--HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 6777744 5689999999999 9999999864
No 70
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.0049 Score=51.82 Aligned_cols=91 Identities=11% Similarity=0.032 Sum_probs=61.3
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-------CCcce
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-------NKSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-------~~AD~ 135 (202)
.+++|+| |.|.++..+++.+ |.. |. +.....+....+.. -+...+++++ ++ ++ ...|+
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 5799998 9999999999887 442 21 22223333322210 0234577776 32 22 35799
Q ss_pred eeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 136 LLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++... ++|.. +..++|++++..|+|||.|++.+
T Consensus 117 V~~~~--------~l~~~---~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 117 ITAVE--------CAHWF---DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEES--------CGGGS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeHhh--------HHHHh---CHHHHHHHHHHhcCCCcEEEEEe
Confidence 99887 66777 56789999999999999998844
No 71
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.96 E-value=0.0067 Score=46.45 Aligned_cols=88 Identities=16% Similarity=0.141 Sum_probs=59.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccccc---ccccchhhhccCCCCCCceeee--ee----cC-CCcceeeee-hhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHD---KAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIK-NMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d---~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk-~m~~ 143 (202)
.+++|+| |.|.++..+++...++ ++... ...+.... .++++. ++ +| ...|++++. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~D~i~~~~~--- 116 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQISETDFDLIVSAGN--- 116 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCCCCCEEEEEECCC---
T ss_pred CeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCCCCceeEEEECCc---
Confidence 4799998 9999999998873222 21111 11111111 134444 32 23 347999887 5
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|..++++..++|++++..|+|||.+++...
T Consensus 117 -----~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 117 -----VMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp -----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----HHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 56778888999999999999999999988653
No 72
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.95 E-value=0.0033 Score=49.21 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=60.4
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++..+ ++ |. +.....+....+ . ..++++. ++ ++ ...|+++....+.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~----~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYA----H-VPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTT----T-CTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcc----c-CCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 4799998 99999999998866 32 21 112222222221 1 2355554 32 23 3479998776443
Q ss_pred cccccccCCCC-----HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 144 VKFQWVLTTWT-----DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 144 ~P~k~VLHdW~-----Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
.-....-..|. .++..++|++++..|+|||++++++.-
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 10000001232 567789999999999999999998753
No 73
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.93 E-value=0.0066 Score=48.61 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=57.5
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC-Ccc---ccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF-GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l-dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..++++.. ++ ++. .....+..... ..++++. ++ +| ...|+++..+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 115 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP------DTGITYERADLDKLHLPQDSFDLAYSSL--- 115 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC------SSSEEEEECCGGGCCCCTTCEEEEEEES---
T ss_pred CEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc------cCCceEEEcChhhccCCCCCceEEEEec---
Confidence 4799998 99999999998754 22 211 11122221111 1245555 32 23 3479999887
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++|.+++ ..++|++++..|+|||++++..
T Consensus 116 -----~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 116 -----ALHYVED--VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp -----CGGGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----cccccch--HHHHHHHHHHhcCcCcEEEEEe
Confidence 6777764 5689999999999999998865
No 74
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=95.91 E-value=0.014 Score=51.43 Aligned_cols=92 Identities=7% Similarity=-0.133 Sum_probs=64.4
Q ss_pred cceeecCChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cCC----Ccceeeeehh
Q 044941 77 EAFADHQNAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YPN----KSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP~----~AD~ylLk~m 141 (202)
.+++|+||.|.++..+++..|.. |+ +..+..|....+.. ++. +++++ ++ +|. ..|++++...
T Consensus 174 ~~VLDlGG~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 174 KDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--GYE-DIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp CEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--TCC-CEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-CEEEEEChhhhhchhhccCCccEEEECCC
Confidence 57999999999999999988842 44 44455565555432 344 77776 42 443 5798887652
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
.|.+ ....+|+++++.|+|||++++++..-
T Consensus 251 --------~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 251 --------ETLE---AIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp --------SSHH---HHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred --------CchH---HHHHHHHHHHHHcccCCeEEEEEEec
Confidence 2322 25899999999999999988887654
No 75
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.88 E-value=0.011 Score=45.13 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=61.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCC-ceeee--ee---cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQ-RCSRV--HF---YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~d-Rcs~v--hf---fP-~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..+++..-++ |. +.....+....+.. ++.+ |+++. ++ ++ ...|++++..
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~---- 127 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLN--NLDNYDIRVVHSDLYENVKDRKYNKIITNP---- 127 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT--TCTTSCEEEEECSTTTTCTTSCEEEEEECC----
T ss_pred CeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECchhcccccCCceEEEECC----
Confidence 4799998 9999999998872222 21 22223333333221 3333 57766 33 23 3578888765
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
.+| |..+...++|++++..|+|||++++...-
T Consensus 128 ----~~~-~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 128 ----PIR-AGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp ----CST-TCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ----Ccc-cchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 334 56788889999999999999999888754
No 76
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=95.88 E-value=0.023 Score=44.41 Aligned_cols=91 Identities=10% Similarity=0.002 Sum_probs=58.9
Q ss_pred ceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcccc
Q 044941 78 AFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 78 ~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~P 145 (202)
+++|+| |.|.++..+++..-++ |. +.....+....+. .+.++++. ++ +| ...|+++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~----- 102 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQE----KGVKITTVQSNLADFDIVADAWEGIVSIF----- 102 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHH----HTCCEEEECCBTTTBSCCTTTCSEEEEEC-----
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHh----cCCceEEEEcChhhcCCCcCCccEEEEEh-----
Confidence 799998 9999998888763222 21 1222223222221 11255555 32 23 3478888742
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
+.++.++..++|++++..|+|||.+++.....
T Consensus 103 -----~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 103 -----CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp -----CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred -----hcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 34578889999999999999999999987643
No 77
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.86 E-value=0.0087 Score=48.48 Aligned_cols=86 Identities=15% Similarity=0.111 Sum_probs=58.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Ccc---ccccccchhhhccCCCCCCceeee--ee--c-C-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF--Y-P-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf--f-P-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++.+|.. ++. .....+... ..++++. ++ + | ...|+++..+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~fD~v~~~~--- 103 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWKPAQKADLLYANA--- 103 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCCCSSCEEEEEEES---
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcCccCCcCEEEEeC---
Confidence 4799998 9999999999998763 111 111112111 2345555 32 2 2 3479999887
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|..+| ..++|++++..|+|||++++...
T Consensus 104 -----~l~~~~~--~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 104 -----VFQWVPD--HLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp -----CGGGSTT--HHHHHHHHGGGEEEEEEEEEEEE
T ss_pred -----chhhCCC--HHHHHHHHHHhcCCCeEEEEEeC
Confidence 6676654 56899999999999999988764
No 78
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.77 E-value=0.019 Score=49.06 Aligned_cols=91 Identities=9% Similarity=0.010 Sum_probs=59.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccc---ccccccchhhhccCCCCCCceeeee--e-----cCCCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTE---HDKAHCPLHLKTGACRFGQRCSRVH--F-----YPNKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~---~d~~~~~~~~k~gacr~~dRcs~vh--f-----fP~~AD~ylLk~m~~~ 144 (202)
.++.|+| |.|.++..++++..++ ++. ..+..+....+. ..-.+.+.+ + .+...|+++...
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~----~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~---- 118 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD----RCVTIDLLDITAEIPKELAGHFDFVLNDR---- 118 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS----SCCEEEECCTTSCCCGGGTTCCSEEEEES----
T ss_pred CEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh----ccceeeeeecccccccccCCCccEEEEhh----
Confidence 5799998 9999999999864332 211 112222222211 111122222 2 123579988877
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.|..++....|++++..| |||+|++--.
T Consensus 119 ----~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 119 ----LINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp ----CGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ----hhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 778999999999999999999 9999987543
No 79
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=95.67 E-value=0.0065 Score=51.32 Aligned_cols=92 Identities=11% Similarity=0.028 Sum_probs=60.2
Q ss_pred CCcceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee--ee----cCC-Ccceeeeehhcccc
Q 044941 75 QSEAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YPN-KSCTLLIKNMYNVK 145 (202)
Q Consensus 75 ~~~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~-~AD~ylLk~m~~~P 145 (202)
....++|+| |+|.++..+++...++ ++ ...+..++.+ +-..+++++ ++ +|. ..|+++...
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~~v~gv----D~s~~ml~~a--~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~----- 107 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFERVHAV----DPGEAQIRQA--LRHPRVTYAVAPAEDTGLPPASVDVAIAAQ----- 107 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCSEEEEE----ESCHHHHHTC--CCCTTEEEEECCTTCCCCCSSCEEEEEECS-----
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCCEEEEE----eCcHHhhhhh--hhcCCceeehhhhhhhcccCCcccEEEEee-----
Confidence 345799998 9999999999876553 22 1112222211 222356665 21 454 469998887
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
++|-.+.+ +.|++++..|+|||.|+++..-.+
T Consensus 108 ---~~h~~~~~---~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 108 ---AMHWFDLD---RFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp ---CCTTCCHH---HHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ---ehhHhhHH---HHHHHHHHHcCCCCEEEEEECCCC
Confidence 67766543 578999999999999988876544
No 80
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=95.66 E-value=0.004 Score=51.76 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=60.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhc-cCCCCCCceeee--ee-------cC-CCcceeeee-
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKT-GACRFGQRCSRV--HF-------YP-NKSCTLLIK- 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~-gacr~~dRcs~v--hf-------fP-~~AD~ylLk- 139 (202)
.+++|+| |.|.++..++++..++ |. +..+..|...... +......++.+. ++ ++ ...|+++..
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g 138 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLG 138 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECT
T ss_pred CEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcC
Confidence 4799998 9999999999986553 22 1222223221100 000001233333 21 33 458999987
Q ss_pred hhcccccccccCCCCH-----HHHHHHHHHHHhhCCCCCEEEEee
Q 044941 140 NMYNVKFQWVLTTWTD-----DECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~D-----ee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+ ++|.+.+ ++..++|++++..|+|||.+++..
T Consensus 139 ~--------~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 139 N--------SFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp T--------CGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred h--------HHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 7 6677776 889999999999999999998764
No 81
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=95.65 E-value=0.0075 Score=48.14 Aligned_cols=90 Identities=12% Similarity=0.086 Sum_probs=59.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++...++ |. +.....+...... .+.++++. ++ ++...|++++.+
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~fD~v~~~~----- 109 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRS----QGLKPRLACQDISNLNINRKFDLITCCL----- 109 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHH----TTCCCEEECCCGGGCCCSCCEEEEEECT-----
T ss_pred CeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhh----cCCCeEEEecccccCCccCCceEEEEcC-----
Confidence 5799998 9999999999875443 22 2222333333221 11255555 32 244579998875
Q ss_pred cccccCCC-CHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 146 FQWVLTTW-TDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 146 ~k~VLHdW-~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
.++|.+ +.++..++|++++..|+|||.+++
T Consensus 110 --~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 110 --DSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp --TGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred --ccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 034555 668899999999999999999886
No 82
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=95.64 E-value=0.0058 Score=49.54 Aligned_cols=88 Identities=9% Similarity=0.161 Sum_probs=58.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccc---ccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++...++ ++. .....+.... .....++++. ++ +| ...|+++..+
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~---- 112 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI----AGVDRKVQVVQADARAIPLPDESVHGVIVVH---- 112 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT----TTSCTTEEEEESCTTSCCSCTTCEEEEEEES----
T ss_pred CEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----hccCCceEEEEcccccCCCCCCCeeEEEECC----
Confidence 4799998 9999999998864332 211 1122222221 1223466666 32 23 3479999887
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
++|.++| ..++|++++..|+|||.+++.
T Consensus 113 ----~l~~~~~--~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 ----LWHLVPD--WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ----CGGGCTT--HHHHHHHHHHHEEEEEEEEEE
T ss_pred ----chhhcCC--HHHHHHHHHHHCCCCcEEEEE
Confidence 6677764 468999999999999999887
No 83
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.59 E-value=0.0065 Score=49.26 Aligned_cols=90 Identities=11% Similarity=0.106 Sum_probs=57.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++..-++ |. +..+..+....+. .+.+++++ ++ ++...|++++..-
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~----~~~~v~~~~~d~~~~~~~~~fD~v~~~~~---- 114 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKE----RNLKIEFLQGDVLEIAFKNEFDAVTMFFS---- 114 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----TTCCCEEEESCGGGCCCCSCEEEEEECSS----
T ss_pred CEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHh----cCCceEEEECChhhcccCCCccEEEEcCC----
Confidence 4799998 9999999998863222 21 1222223322221 12255655 33 2445788876420
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
.+|.++.++..++|++++..|+|||.+++
T Consensus 115 ---~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 115 ---TIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp ---GGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---chhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 34556788999999999999999999865
No 84
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=95.49 E-value=0.0086 Score=50.28 Aligned_cols=98 Identities=7% Similarity=-0.073 Sum_probs=61.4
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhc--------cCC------CCCCceeee--eec--C--
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKT--------GAC------RFGQRCSRV--HFY--P-- 130 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~--------gac------r~~dRcs~v--hff--P-- 130 (202)
..++.|+| |.|..+..++++--++ |. +..+..+...... ... ..+.++++. +++ |
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~ 148 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRA 148 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcc
Confidence 35799998 9999999998863222 22 1112222111100 000 013467776 443 2
Q ss_pred --CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 131 --NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 131 --~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
...|+++... ++|..++++..+.+++++..|+|||+++++...
T Consensus 149 ~~~~FD~V~~~~--------~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 149 NIGKFDRIWDRG--------ALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp CCCCEEEEEESS--------STTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCCEEEEEEhh--------hhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 3479988776 667777777889999999999999999755433
No 85
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.45 E-value=0.025 Score=44.14 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=63.4
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC-----Cc-cccccccchhhhccCCCCCCceeee--ee-----c-CCCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF-----Y-PNKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf-----f-P~~AD~ylLk~ 140 (202)
..++|+| |.|.++..+++.+ |.- |. +.....+...++.. ++.++++++ ++ + +...|++++..
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL--NLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT--TCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 4799998 9999999999986 442 32 22233344433322 345577776 32 2 34578887654
Q ss_pred hccccc--ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 141 MYNVKF--QWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 141 m~~~P~--k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
.| .|. +. +....++..++|+++++.|+|||+++++...-
T Consensus 102 ~~-~~~~~~~--~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 102 GY-LPSGDHS--ISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp SB-CTTSCTT--CBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred Cc-ccCcccc--cccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 22 111 11 12234566779999999999999999887543
No 86
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=95.45 E-value=0.0079 Score=46.89 Aligned_cols=99 Identities=10% Similarity=-0.017 Sum_probs=49.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC------CCcceee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP------NKSCTLL 137 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP------~~AD~yl 137 (202)
..+++|+| |+|.++..+++.+|.. |. +.....+...++. .+.++++. ++ ++ ...|+++
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER----FGAVVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH----hCCceEEEEcchHhhhhhhhhccCcccEEE
Confidence 35799997 9999999999999862 22 2223333333321 11155555 32 33 5578887
Q ss_pred eehhcccccccccCCCCHHH------------------HHHHHHHHHhhCCCCCEEEEeee
Q 044941 138 IKNMYNVKFQWVLTTWTDDE------------------CKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 138 Lk~m~~~P~k~VLHdW~Dee------------------~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
..--|.. ...++.++.+. ..+++++++..|+|||++++++.
T Consensus 107 ~npp~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 107 SNPPYIP--TGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp ECCCCCC--------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred ECCCCCC--CccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 6321110 00222333322 27888999999999999777664
No 87
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=95.41 E-value=0.014 Score=48.49 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=55.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Ccc---ccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++ |.. ++. ..+..+... . .++++. ++ ++...|+++..+
T Consensus 59 ~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~-------~-~~~~~~~~d~~~~~~~~~fD~v~~~~--- 125 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQN-------Y-PHLHFDVADARNFRVDKPLDAVFSNA--- 125 (279)
T ss_dssp CEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHH-------C-TTSCEEECCTTTCCCSSCEEEEEEES---
T ss_pred CEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhh-------C-CCCEEEECChhhCCcCCCcCEEEEcc---
Confidence 4799998 99999999998 442 111 111111111 1 244444 22 245579999888
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.+.|. .++|++++..|+|||++++...
T Consensus 126 -----~l~~~~d~--~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 126 -----MLHWVKEP--EAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp -----CGGGCSCH--HHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----hhhhCcCH--HHHHHHHHHhcCCCcEEEEEec
Confidence 66666643 4889999999999999988654
No 88
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.38 E-value=0.043 Score=50.28 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=63.6
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cccc---ccccc-------chhhhccCCCCC-Cceeee--e-e-----c---
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GTEH---DKAHC-------PLHLKTGACRFG-QRCSRV--H-F-----Y--- 129 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl~~---d~~~~-------~~~~k~gacr~~-dRcs~v--h-f-----f--- 129 (202)
...++|+| |.|.++..+++.+|.. ++.. ....| ....+. .++. ++++++ + + |
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~--~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKL--YGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH--TTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH--cCCCCCceEEEEcCccccccccccc
Confidence 35799998 9999999999987752 2221 11222 222221 1222 467665 2 3 1
Q ss_pred CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 130 PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 130 P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
....|++++.+ .++ . ++..+.|++++..|+|||+|++.+.+.+..
T Consensus 321 ~~~FDvIvvn~--------~l~--~-~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 321 IPQCDVILVNN--------FLF--D-EDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp GGGCSEEEECC--------TTC--C-HHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred cCCCCEEEEeC--------ccc--c-ccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 23479988765 332 2 456678899999999999999999887765
No 89
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=95.35 E-value=0.015 Score=51.74 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=60.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCC--ceeee--ee---cC-CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQ--RCSRV--HF---YP-NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~d--Rcs~v--hf---fP-~~AD~ylLk~m 141 (202)
..++|+| |.|.++..+++++|.. |. +.....+....+.. ++.+ ++++. ++ +| ...|++++.--
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n--gl~~~~~v~~~~~D~~~~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN--MPEALDRCEFMINNALSGVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--CGGGGGGEEEEECSTTTTCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc--CCCcCceEEEEechhhccCCCCCeeEEEECCC
Confidence 5799998 9999999999999874 22 22233344433322 3333 35445 33 34 35788877542
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
|+ ......+....++|+.++..|+|||+++++-
T Consensus 302 fh-----~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 302 FH-----QQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp C------------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc-----cCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 21 1113445666789999999999999998854
No 90
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.29 E-value=0.014 Score=51.43 Aligned_cols=99 Identities=10% Similarity=0.043 Sum_probs=64.9
Q ss_pred CcceeecC-ChHHHHHHHHHHC-CCC-----Cc-cccccccchhhhccCC---C-C-CCceeee--ee----------cC
Q 044941 76 SEAFADHQ-NAQQALETVAQQV-PNF-----GT-EHDKAHCPLHLKTGAC---R-F-GQRCSRV--HF----------YP 130 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~-P~l-----dl-~~d~~~~~~~~k~gac---r-~-~dRcs~v--hf----------fP 130 (202)
..+++|+| |.|.++..+++.+ |.. |. +..+..+....+.... + + ..+++++ ++ +|
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 35799998 9999999999987 543 22 2222233322211000 0 1 1466666 22 23
Q ss_pred -CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 131 -NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 131 -~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
...|+++... ++|.++| ..++|++++..|+|||++++.+...+.
T Consensus 164 ~~~fD~V~~~~--------~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 164 DSSVDIVISNC--------VCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp TTCEEEEEEES--------CGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred CCCEEEEEEcc--------chhcCCC--HHHHHHHHHHHcCCCCEEEEEEecccc
Confidence 3579999887 6677765 468999999999999999999876654
No 91
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=95.23 E-value=0.0044 Score=57.15 Aligned_cols=90 Identities=11% Similarity=0.068 Sum_probs=62.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----CccccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..+++ .|.. |.......+....+.. ++.++++++ ++ +|...|+++...
T Consensus 160 ~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~--gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~---- 232 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSN--NLTDRIVVIPGKVEEVSLPEQVDIIISEP---- 232 (480)
T ss_dssp CEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHT--TCTTTEEEEESCTTTCCCSSCEEEEECCC----
T ss_pred CEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHc--CCCCcEEEEECchhhCccCCCeEEEEEeC----
Confidence 4799998 99999988877 4542 3222223333333322 566889888 33 255689998765
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
.++.|.+++....|..++..|+|||.+++
T Consensus 233 ----~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 233 ----MGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ----CHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred ----chHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 34567778888899999999999999873
No 92
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.21 E-value=0.04 Score=45.45 Aligned_cols=91 Identities=11% Similarity=0.046 Sum_probs=61.0
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC---C--Ccceeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP---N--KSCTLLI 138 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP---~--~AD~ylL 138 (202)
.+++|+| |.|..+..+++++| .. |. +.....+...++.. ++.+++++. +. .| . ..|++++
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--GVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 4799998 99999999999988 32 22 22233444444332 566788887 32 22 2 4687766
Q ss_pred ehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 139 KNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
.. +.......|++++..|+|||.|++-+.+.
T Consensus 143 d~-------------~~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 143 DA-------------DKPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CS-------------CGGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred CC-------------chHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 43 34456678999999999999877655543
No 93
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.14 E-value=0.029 Score=47.09 Aligned_cols=90 Identities=10% Similarity=0.007 Sum_probs=64.2
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec---C-C-Ccceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-N-KSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~-~AD~ylLk~m 141 (202)
...++|+| |+|.++..+++..|.- |. +.....+....+.. ++.+|+++. +.+ | . ..|++++.+|
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 35799998 9999999999998862 32 23334455555433 677888887 433 4 2 4899998874
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.-+-..+||..++..|.++|++++.-
T Consensus 94 ------------Gg~~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 94 ------------GGRLIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp ------------CHHHHHHHHHHTGGGCTTCCEEEEEE
T ss_pred ------------ChHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 23557889999999999988876643
No 94
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=94.97 E-value=0.0094 Score=47.69 Aligned_cols=89 Identities=17% Similarity=0.131 Sum_probs=57.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~P 145 (202)
.+++|+| |.|.++..+++. -++ |. +.....+....+. .+.++++. ++ ++...|++++..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~fD~v~~~~----- 104 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAME----TNRHVDFWVQDMRELELPEPVDAITILC----- 104 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHH----TTCCCEEEECCGGGCCCSSCEEEEEECT-----
T ss_pred CeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhh----cCCceEEEEcChhhcCCCCCcCEEEEeC-----
Confidence 5799998 999999998876 222 21 2222233332221 12355555 32 245578888753
Q ss_pred cccccCCC-CHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 146 FQWVLTTW-TDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 146 ~k~VLHdW-~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
.++|.+ +.++..++|++++..|+|||++++
T Consensus 105 --~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 105 --DSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp --TGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred --CchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 033444 788899999999999999999876
No 95
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=94.94 E-value=0.0077 Score=52.59 Aligned_cols=91 Identities=11% Similarity=0.073 Sum_probs=61.4
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---CccccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~P 145 (202)
..++|+| |.|.++..++++.. ++ +.......+....+. .++.++++++ ++ +|...|+++...
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~--~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~----- 124 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKS--NNLTDRIVVIPGKVEEVSLPEQVDIIISEP----- 124 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHH--TTCTTTEEEEESCTTTCCCSSCEEEEEECC-----
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHH--cCCCCcEEEEEcchhhCCCCCceeEEEEeC-----
Confidence 4699998 99999998887522 11 222122223333332 2566788887 33 255689998876
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
.++.|..+.....|.+++..|+|||.+++
T Consensus 125 ---~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 125 ---MGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp ---CBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred ---chhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 44677777888889999999999999874
No 96
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=94.87 E-value=0.042 Score=43.73 Aligned_cols=91 Identities=10% Similarity=0.014 Sum_probs=60.1
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC-------CCccee
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-------NKSCTL 136 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-------~~AD~y 136 (202)
..++|+| |.|..+..+++++| .. |. +.....+...++.. ++.++++++ +. +| ...|++
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--NLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 4799998 99999999999988 32 21 22233344444332 566788887 32 22 236777
Q ss_pred eeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 137 LIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 137 lLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
++.. .......+|+.+++.|+|||.|++-+.+.
T Consensus 138 ~~d~-------------~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 138 FIDA-------------DKQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp EECS-------------CGGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred EEcC-------------CcHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 6543 23456789999999999999776655443
No 97
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=94.74 E-value=0.028 Score=43.36 Aligned_cols=102 Identities=11% Similarity=0.038 Sum_probs=57.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee-----c-CCCcceeeee-hh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF-----Y-PNKSCTLLIK-NM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf-----f-P~~AD~ylLk-~m 141 (202)
...++|+| |.|.++..+++..-++ |. +.....+....+.. ++ ++++++ ++ + +...|++++. ..
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~--~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL--GI-ENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH--TC-CCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--CC-CcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 35799998 9999999999872222 22 22233344333321 23 567766 11 3 3447888654 21
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
++...+.+ .-..++..+.|++++..|+|||+++++...-
T Consensus 100 ~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 100 LPSADKSV--ITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ------------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCcchhc--ccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 10000000 0134667788999999999999998876543
No 98
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=94.64 E-value=0.028 Score=48.21 Aligned_cols=49 Identities=16% Similarity=0.195 Sum_probs=40.8
Q ss_pred Cceeee-e-e----cC--CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 121 QRCSRV-H-F----YP--NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 121 dRcs~v-h-f----fP--~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
+++++. + . || ...|+++.+| +++-++++...+++++++.+|+|||.+++
T Consensus 194 ~~V~F~~~dl~~~~~~~~~~fDlI~crn--------vliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 194 NYVEFSSVNLLEKQYNVPGPFDAIFCRN--------VMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp TTEEEEECCTTCSSCCCCCCEEEEEECS--------SGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ccCeEEecccCCCCCCcCCCeeEEEECC--------chHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 467776 2 2 33 3579999999 78899999999999999999999999976
No 99
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=94.59 E-value=0.033 Score=44.86 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=60.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC-----CCcceeeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-----NKSCTLLIK 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-----~~AD~ylLk 139 (202)
.+++|+| |.|.++..+++.+|.. |. +.....+...++.. ++.+++++. ++ .| ...|++++.
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--GLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 4799997 9999999999999853 22 22233344443322 455677776 32 12 346888776
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
. ..+ +...+|+.++..|+|||+|++.+.+
T Consensus 134 ~--------~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 134 A--------AKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp G--------GGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred C--------CHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 5 223 5678899999999999999886543
No 100
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=94.52 E-value=0.007 Score=47.58 Aligned_cols=88 Identities=13% Similarity=0.034 Sum_probs=55.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-CccccccccchhhhccCCCCCCceeee-----ee-----cCCC-cceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKAHCPLHLKTGACRFGQRCSRV-----HF-----YPNK-SCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~~~~~~~k~gacr~~dRcs~v-----hf-----fP~~-AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++...++ ++. ..+..+....-+ .++.+. ++ .+.. .|+++..+
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD----~s~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~--- 124 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIEAVGVD----GDRTLVDAARAA--GAGEVHLASYAQLAEAKVPVGKDYDLICANF--- 124 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCEEEEEE----SCHHHHHHHHHT--CSSCEEECCHHHHHTTCSCCCCCEEEEEEES---
T ss_pred CEEEEeCCCCCHHHHHHHHCCCEEEEEc----CCHHHHHHHHHh--cccccchhhHHhhcccccccCCCccEEEECc---
Confidence 5799998 9999999998873332 111 111111110001 122222 12 2333 79999988
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
++| +. +..++|++++..|+|||++++.+..
T Consensus 125 -----~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 125 -----ALL-HQ--DIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp -----CCC-SS--CCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -----hhh-hh--hHHHHHHHHHHHhCCCeEEEEEecC
Confidence 667 43 4558999999999999999998753
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.46 E-value=0.013 Score=47.52 Aligned_cols=95 Identities=14% Similarity=0.161 Sum_probs=61.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--e---e---cC-CCcceeee-e
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--H---F---YP-NKSCTLLI-K 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--h---f---fP-~~AD~ylL-k 139 (202)
..+++|+| |.|.++..+++..+. + |. +..+..+....+ ..+.+++++ + + || ...|+++. .
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~----~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~ 136 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAP----RQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGG----GCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHH----hcCCCeEEEecCHHHhhcccCCCceEEEEECC
Confidence 35799998 999999999765442 2 21 222233333222 223566665 2 2 34 34798887 3
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
..+ ..+++.......+|++++..|+|||++++++.
T Consensus 137 ~~~------~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 137 YPL------SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCC------BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccc------chhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 311 24566667778899999999999999998874
No 102
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.40 E-value=0.056 Score=47.37 Aligned_cols=87 Identities=6% Similarity=-0.043 Sum_probs=59.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee--cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP-~~AD~ylLk~m~~~ 144 (202)
.++.|+| |.|.++..++.+.+.. |. +...+.|...++.. ++ ++++++ +. +| ...|++++..
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~--gl-~~v~~v~gDa~~l~d~~FDvV~~~a---- 196 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL--GV-DGVNVITGDETVIDGLEFDVLMVAA---- 196 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH--TC-CSEEEEESCGGGGGGCCCSEEEECT----
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc--CC-CCeEEEECchhhCCCCCcCEEEECC----
Confidence 5799998 6787766666666653 22 33344455544332 45 788887 33 35 4579998765
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
. -++-.++|+.+++.|+|||+|++.+
T Consensus 197 ----~-----~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 197 ----L-----AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp ----T-----CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ----C-----ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 1 1456789999999999999999876
No 103
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=94.39 E-value=0.022 Score=46.35 Aligned_cols=87 Identities=16% Similarity=0.159 Sum_probs=58.6
Q ss_pred cceeecC-ChHHHHHHHHHH-CCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cCC-Ccceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQ-VPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YPN-KSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~-~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP~-~AD~ylLk~m~ 142 (202)
..++|+| |.|.++..+++. .|.. |. +.....+...++.. ++.+|+++. ++ +|. ..|++++.-
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA--GFDDRVTIKLKDIYEGIEEENVDHVILDL-- 170 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--TCTTTEEEECSCGGGCCCCCSEEEEEECS--
T ss_pred CEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--CCCCceEEEECchhhccCCCCcCEEEECC--
Confidence 4799998 999999999999 6663 33 23334444444332 456778887 33 453 367776521
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
. +...+|+++++.|+|||++++...
T Consensus 171 -----------~--~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 171 -----------P--QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp -----------S--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred -----------C--CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 1 114679999999999999988764
No 104
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.37 E-value=0.032 Score=44.48 Aligned_cols=91 Identities=11% Similarity=0.159 Sum_probs=55.5
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc---cccccccchhhhccCCCCCCceeee--ee------cC-CCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF------YP-NKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf------fP-~~AD~ylLk 139 (202)
...++|+| |.|.++..+++.+|+. ++ +..+..+....+.. ++ ++++++ +. +| ...|++++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--GV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--CC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--CC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 35699998 9999999999999973 22 22223333332211 22 456665 21 33 336777655
Q ss_pred hhcccccccccCCCCHH-------HHHHHHHHHHhhCCCCCEEEEe
Q 044941 140 NMYNVKFQWVLTTWTDD-------ECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~De-------e~~~IL~~~~~AL~~gGrLlI~ 178 (202)
. + ..|... ....+|+.++..|+|||.+++.
T Consensus 119 ~--~-------~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 119 F--S-------DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp S--C-------CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred C--C-------CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 2 1 123211 2357899999999999998764
No 105
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=94.31 E-value=0.052 Score=44.76 Aligned_cols=101 Identities=8% Similarity=-0.022 Sum_probs=59.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee------cC-CCcceeeeeh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF------YP-NKSCTLLIKN 140 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf------fP-~~AD~ylLk~ 140 (202)
..+++|+| |+|.++..++++.+. + |. +.....|....+.. ++.+|++++ ++ ++ ...|+++.--
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~--~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYN--QLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHT--TCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHC--CCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 35799998 999999999998773 2 32 22233444444332 566788887 33 22 4478887632
Q ss_pred hcc--------ccc--ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 141 MYN--------VKF--QWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 141 m~~--------~P~--k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
-|. .|. ..+.+.........+++.++..|+|||+++++
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 110 000 00111122345678999999999999999884
No 106
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=94.27 E-value=0.021 Score=46.54 Aligned_cols=90 Identities=12% Similarity=0.079 Sum_probs=59.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC----CCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP----NKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP----~~AD~ylLk~ 140 (202)
..++|+| |.|.++..+++..|.. |. +.....+...++.. ++.++++++ +. .| ...|++++..
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--HFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 4799998 9999999999977763 22 22233444444332 566788887 32 24 3467776553
Q ss_pred hcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 141 MYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
+.+....+|+.++..|+|||.|++-+.+
T Consensus 151 -------------~~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 151 -------------AKAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp -------------TSSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred -------------cHHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 2334667999999999999988664433
No 107
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=94.25 E-value=0.027 Score=42.81 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=57.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..+++..-++ |. +.....+....+.. ++.+++++. ++ +| ...|++++..
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---- 108 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH--GLGDNVTLMEGDAPEALCKIPDIDIAVVGG---- 108 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT--TCCTTEEEEESCHHHHHTTSCCEEEEEESC----
T ss_pred CEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHc--CCCcceEEEecCHHHhcccCCCCCEEEECC----
Confidence 4799998 8999999999877222 21 12222333332221 343567766 32 34 3578888776
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|+ ...+|+++++.|+|||.+++...
T Consensus 109 ----~~~~-----~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 109 ----SGGE-----LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp ----CTTC-----HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ----chHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 4443 47899999999999999988764
No 108
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.15 E-value=0.034 Score=44.27 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=61.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC--------CCcce
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--------NKSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--------~~AD~ 135 (202)
..++|+| |.|..+..+++++|. . |. +.....+...++.. ++.+++++. +. +| ...|+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--GLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--CCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 4799998 999999999999883 2 22 22233344444332 566778877 22 11 44677
Q ss_pred eeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 136 LLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
+++.. ..+....+|+.++..|+|||.|++-+.+.
T Consensus 144 v~~~~-------------~~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 144 IYIDA-------------DKANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEECS-------------CGGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EEECC-------------CHHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 76443 24556779999999999999998877654
No 109
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=94.14 E-value=0.04 Score=43.26 Aligned_cols=84 Identities=15% Similarity=0.136 Sum_probs=53.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Ccc-ccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTE-HDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~-~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+ .++++ |.. .....+... . .+++++ ++ +| ...|++++.+
T Consensus 38 ~~vLdiG~G~G~~~~~l--~~~~v~~vD~s~~~~~~a~~~-------~-~~~~~~~~d~~~~~~~~~~fD~v~~~~---- 103 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVGRRR-------A-PEATWVRAWGEALPFPGESFDVVLLFT---- 103 (211)
T ss_dssp SEEEEETCTTCHHHHHC--CCSEEEEECCCHHHHHHHHHH-------C-TTSEEECCCTTSCCSCSSCEEEEEEES----
T ss_pred CeEEEECCCCCHhHHhC--CCCeEEEEeCCHHHHHHHHHh-------C-CCcEEEEcccccCCCCCCcEEEEEEcC----
Confidence 4799998 899888777 22121 211 111111111 1 344444 22 23 3479999988
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.+++ ..++|++++..|+|||++++...
T Consensus 104 ----~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 104 ----TLEFVED--VERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp ----CTTTCSC--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----hhhhcCC--HHHHHHHHHHHcCCCCEEEEEec
Confidence 7777764 46899999999999999998864
No 110
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.08 E-value=0.06 Score=45.36 Aligned_cols=90 Identities=10% Similarity=-0.100 Sum_probs=63.1
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec----CC-Ccceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PN-KSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~-~AD~ylLk~m 141 (202)
...++|+| |+|.++..+++..|.- |. +.....+....+.. ++.+|+++. +.+ |. ..|++++.+|
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 35799998 9999999999988762 32 23334455555433 677899888 433 43 4899998886
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
- -+-..+||.....-+.++|++++.-
T Consensus 100 G------------g~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 100 G------------GRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp C------------HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred c------------hHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 3 3567778888887788777776655
No 111
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=94.04 E-value=0.02 Score=45.68 Aligned_cols=84 Identities=12% Similarity=0.059 Sum_probs=53.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCCCccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNVKFQW 148 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~P~k~ 148 (202)
.+++|+| |.|.++..+++. .++ ...+..++...-+ ++++. ++ ++ ...|++++.+
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~---~~v----D~s~~~~~~a~~~---~~~~~~~d~~~~~~~~~~fD~v~~~~-------- 110 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK---IGV----EPSERMAEIARKR---GVFVLKGTAENLPLKDESFDFALMVT-------- 110 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC---EEE----ESCHHHHHHHHHT---TCEEEECBTTBCCSCTTCEEEEEEES--------
T ss_pred CcEEEeCCCCCHHHHHHHHH---hcc----CCCHHHHHHHHhc---CCEEEEcccccCCCCCCCeeEEEEcc--------
Confidence 5799998 899998888765 211 1111111110000 23333 22 23 3479999988
Q ss_pred ccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 149 VLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 149 VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.+++. .++|++++..|+|||.+++.+.
T Consensus 111 ~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 111 TICFVDDP--ERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp CGGGSSCH--HHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHhhccCH--HHHHHHHHHHcCCCcEEEEEEe
Confidence 66766543 6899999999999999998765
No 112
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=93.99 E-value=0.067 Score=41.43 Aligned_cols=88 Identities=11% Similarity=0.034 Sum_probs=55.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCCCccccccccchhhhccCCCCCCceeee--ee---cC-CCcceeeeehhcccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-NKSCTLLIKNMYNVKFQWV 149 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-~~AD~ylLk~m~~~P~k~V 149 (202)
.+++|+| |+|.++..++++. ++ .-.+..+..++. ..+++++ ++ ++ ...|+++..- .
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~-~v---~gvD~s~~~~~~-----~~~~~~~~~d~~~~~~~~~fD~i~~n~--------~ 87 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN-TV---VSTDLNIRALES-----HRGGNLVRADLLCSINQESVDVVVFNP--------P 87 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS-EE---EEEESCHHHHHT-----CSSSCEEECSTTTTBCGGGCSEEEECC--------C
T ss_pred CeEEEeccCccHHHHHHHhcC-cE---EEEECCHHHHhc-----ccCCeEEECChhhhcccCCCCEEEECC--------C
Confidence 4799998 9999999999877 42 111122222211 2345554 33 33 4578887754 2
Q ss_pred cCCCCHH-------HHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 150 LTTWTDD-------ECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 150 LHdW~De-------e~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
.|..++. +...+++++.+.+ |||++++++.-.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 88 YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred CccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 3433332 5567888998888 999999887543
No 113
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=93.80 E-value=0.096 Score=45.08 Aligned_cols=104 Identities=16% Similarity=0.060 Sum_probs=60.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC------Ccc-ccccccchhhhccCCCCCCceeee--ee--c---CCCcceeeee-
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF------GTE-HDKAHCPLHLKTGACRFGQRCSRV--HF--Y---PNKSCTLLIK- 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l------dl~-~d~~~~~~~~k~gacr~~dRcs~v--hf--f---P~~AD~ylLk- 139 (202)
...++|++ |.|..+..+++..++- |.. .-...+....+.. ++. .++++ ++ + +...|++++-
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~--g~~-~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL--GVL-NVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--TCC-SEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh--CCC-eEEEEECChhhcccccccCCEEEEeC
Confidence 35799997 9999999999987642 221 1122233332211 222 35555 32 2 2347888862
Q ss_pred -----hhcc-cccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 140 -----NMYN-VKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 140 -----~m~~-~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
.++. +|. +.+.|+.++. .++|++++..|+|||+|++...-+..
T Consensus 196 Pcsg~g~~~~~p~--~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~ 251 (315)
T 1ixk_A 196 PCTGSGTIHKNPE--RKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP 251 (315)
T ss_dssp CTTSTTTCC----------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG
T ss_pred CCCCcccccCChh--HhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh
Confidence 2221 232 3345777664 58999999999999999887654443
No 114
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=93.73 E-value=0.062 Score=44.40 Aligned_cols=90 Identities=8% Similarity=-0.013 Sum_probs=61.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC--------CCcce
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--------NKSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--------~~AD~ 135 (202)
..++|+| |.|..+..+++..|. . |. +.....+...++.. ++.++++++ +. .| ...|+
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--KQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--TCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 4699997 999999999998873 1 22 23344455555432 567788887 32 22 34687
Q ss_pred eeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 136 LLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
+++.. +.+.....|+.+++.|+|||.|++-+.+
T Consensus 140 V~~d~-------------~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 140 IFIDA-------------DKTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEES-------------CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEcC-------------ChHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 76653 1345667899999999999988876554
No 115
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.73 E-value=0.071 Score=42.24 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=52.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Ccccc-ccccchhhh-ccCCCCCCceeee--ee----cCCCcceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GTEHD-KAHCPLHLK-TGACRFGQRCSRV--HF----YPNKSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl~~d-~~~~~~~~k-~gacr~~dRcs~v--hf----fP~~AD~ylLk~m 141 (202)
...++|+| |.|.++..+++.+|.. |.... +..+....+ .....-..+++++ ++ ++.++|.+.+--
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~~~- 106 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHVLM- 106 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEEES-
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEEEc-
Confidence 35799998 9999999999999873 22211 111111110 0001112356666 32 233336655221
Q ss_pred cccccccccCCCCHH---H---HHHHHHHHHhhCCCCCEEEEe
Q 044941 142 YNVKFQWVLTTWTDD---E---CKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 142 ~~~P~k~VLHdW~De---e---~~~IL~~~~~AL~~gGrLlI~ 178 (202)
.|... . ..++|++++..|+|||++++.
T Consensus 107 ----------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 107 ----------PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ----------CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred ----------cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 23322 1 168899999999999999884
No 116
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=93.71 E-value=0.071 Score=45.33 Aligned_cols=90 Identities=13% Similarity=0.045 Sum_probs=62.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec----CC-Ccceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PN-KSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~-~AD~ylLk~m 141 (202)
...++|+| |+|.++..+++..|.- |. +.....|....+.. ++.+|+++. +.+ |. ..|++++.+|
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEecchhhccCccccccEEEEeCC
Confidence 35799998 9999999999988762 32 23344455555433 677888887 433 33 3899998875
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
- -+-..+||...+.-|.+++++|+.-
T Consensus 100 G------------g~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 100 G------------GTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp C------------HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred c------------hHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 3 3567778888888887777776664
No 117
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=93.68 E-value=0.022 Score=47.52 Aligned_cols=98 Identities=4% Similarity=-0.025 Sum_probs=66.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Ccc-ccccccchhhhccCCCCCCceeeeeec----CCCcceeeeehhccc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GTE-HDKAHCPLHLKTGACRFGQRCSRVHFY----PNKSCTLLIKNMYNV 144 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl~-~d~~~~~~~~k~gacr~~dRcs~vhff----P~~AD~ylLk~m~~~ 144 (202)
..++.|+| |.|-++..++...|+. |.. ..++.+....... +..+++++.+.. |..+|++++-+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~--g~~~~v~~~d~~~~~~~~~~DvVLa~k---- 123 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL--KTTIKYRFLNKESDVYKGTYDVVFLLK---- 123 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS--CCSSEEEEECCHHHHTTSEEEEEEEET----
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc--CCCccEEEecccccCCCCCcChhhHhh----
Confidence 35899999 9999999999999985 322 2233344444322 455566666432 44579999999
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee--eccCCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE--PVLPDD 185 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E--~vl~~~ 185 (202)
++|-. + +-...+.+++++|+|||-+|-.+ .+....
T Consensus 124 ----~LHlL-~-~~~~al~~v~~~L~pggvfISfptksl~Gr~ 160 (200)
T 3fzg_A 124 ----MLPVL-K-QQDVNILDFLQLFHTQNFVISFPIKSLSGKE 160 (200)
T ss_dssp ----CHHHH-H-HTTCCHHHHHHTCEEEEEEEEEECCCCC--C
T ss_pred ----HHHhh-h-hhHHHHHHHHHHhCCCCEEEEeChHHhcCCC
Confidence 66777 3 33444448999999999999999 565543
No 118
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=93.65 E-value=0.19 Score=38.94 Aligned_cols=93 Identities=6% Similarity=-0.076 Sum_probs=59.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee------c-CCCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF------Y-PNKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf------f-P~~AD~ylLk~m 141 (202)
..++|++ |.|.++..+++.... + |. +.....+....+.. ++ ++++++ +. + +...|++++...
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL--GL-SGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH--TC-SCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc--CC-CceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 4799998 999999888775322 1 22 22223333333221 23 567776 32 2 345788877542
Q ss_pred cccccccccCCCCHHHHHHHHHHHHh--hCCCCCEEEEeeec
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYK--ALPAGGKLIACEPV 181 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~--AL~~gGrLlI~E~v 181 (202)
..+..++..++++.+++ .|+|||.+++....
T Consensus 123 ---------~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 123 ---------YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp ---------TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred ---------CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 23456888999999999 99999999886543
No 119
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=93.61 E-value=0.052 Score=42.56 Aligned_cols=90 Identities=11% Similarity=0.126 Sum_probs=54.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCCCccccccccchhhhccCCCCCCceeeeee------cC-CCcceeeeehhccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPLHLKTGACRFGQRCSRVHF------YP-NKSCTLLIKNMYNVKFQW 148 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~~~k~gacr~~dRcs~vhf------fP-~~AD~ylLk~m~~~P~k~ 148 (202)
.+++|+| |.|.++..+++. +.- ....+..+..++....+. .++...++ ++ ...|++++.+
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~-~~~--~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~~-------- 101 (230)
T 3cc8_A 34 KEVLDIGCSSGALGAAIKEN-GTR--VSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFGD-------- 101 (230)
T ss_dssp SEEEEETCTTSHHHHHHHTT-TCE--EEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEES--------
T ss_pred CcEEEeCCCCCHHHHHHHhc-CCe--EEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEECC--------
Confidence 5799998 999999999887 421 111111111111100011 11111121 23 3479999887
Q ss_pred ccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 149 VLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 149 VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
++|.+++. .++|++++..|+|||.+++...
T Consensus 102 ~l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 102 VLEHLFDP--WAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp CGGGSSCH--HHHHHHTGGGEEEEEEEEEEEE
T ss_pred hhhhcCCH--HHHHHHHHHHcCCCCEEEEEeC
Confidence 67777655 4899999999999999988764
No 120
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=93.52 E-value=0.072 Score=42.64 Aligned_cols=94 Identities=12% Similarity=0.120 Sum_probs=59.0
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC-----Cc-cccccccchhhhccCCCCCCceeee--ee---c---C-----CCcce
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---Y---P-----NKSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---f---P-----~~AD~ 135 (202)
..++|+| |.|.++..++++.| .. |. +.....+...++.. ++.+|++++ +. . + ...|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--GLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--CCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 4699998 99999999999876 31 22 22233344444322 566788887 32 2 2 34788
Q ss_pred eeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 136 LLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
+++.. ..|.+ ....++++.+ ..|+|||.|++-+...+
T Consensus 138 V~~d~--------~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 138 VFLDH--------WKDRY--LPDTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp EEECS--------CGGGH--HHHHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred EEEcC--------Ccccc--hHHHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 88765 22333 3344677777 88999998877665543
No 121
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.44 E-value=0.044 Score=48.40 Aligned_cols=94 Identities=11% Similarity=0.055 Sum_probs=60.8
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC-C--ccccccccchhhhccCCCCCCceeee--ee----cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF-G--TEHDKAHCPLHLKTGACRFGQRCSRV--HF----YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l-d--l~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP~~AD~ylLk~m~~~P 145 (202)
..+.|+| |.|.++..++++.. ++ + .......|....+.. ++.++++++ +. +|...|+++...|
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~---- 138 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKAN--NLDHIVEVIEGSVEDISLPEKVDVIISEWM---- 138 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHT--TCTTTEEEEESCGGGCCCSSCEEEEEECCC----
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHc--CCCCeEEEEECchhhcCcCCcceEEEEcCh----
Confidence 4799998 99999999998754 22 2 222223333333322 567888887 33 3556899887432
Q ss_pred cccccCCCC-HHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 146 FQWVLTTWT-DDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 146 ~k~VLHdW~-Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
.|-.. +.....+|+.++..|+|||.++..+.
T Consensus 139 ----~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 139 ----GYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp ----BTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred ----hhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 22222 23356789999999999999876554
No 122
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=93.40 E-value=0.043 Score=44.54 Aligned_cols=90 Identities=12% Similarity=0.012 Sum_probs=58.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC------Cc-cccccccchhhhccCCCCCCceeee--ee---cC-------------
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF------GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP------------- 130 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l------dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP------------- 130 (202)
.+++|+| |.|.++..+++..|.- |. +.....+...++. .++.+++++. +. .|
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~--~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE--NGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH--TTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--cCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 4799997 9999999999998742 21 2222334444332 2455677776 32 22
Q ss_pred ------CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 131 ------NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 131 ------~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
...|++++. +..+.....|+++++.|+|||.|++.+.+
T Consensus 140 ~f~~~~~~fD~I~~~-------------~~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLD-------------ADKENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp TTCCSTTCEEEEEEC-------------SCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred cccCCCCCcCEEEEe-------------CCHHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 335666544 33455668899999999999999886644
No 123
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=93.27 E-value=0.17 Score=40.34 Aligned_cols=87 Identities=10% Similarity=0.033 Sum_probs=54.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..+++..-++ |. +.....+....+.. ++.++++++ ++ ++ ...|++++..
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~---- 130 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTY--GLSPRMRAVQGTAPAALADLPLPEAVFIGG---- 130 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCTTGGGTTSCCCSEEEECS----
T ss_pred CEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCEEEEeCchhhhcccCCCCCEEEECC----
Confidence 4799998 9999999999872121 22 12223333333221 445577776 32 22 2478887664
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
.+ + .. +|+.+++.|+|||++++...
T Consensus 131 ----~~---~---~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 131 ----GG---S---QA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp ----CC---C---HH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ----cc---c---HH-HHHHHHHhcCCCcEEEEEec
Confidence 22 2 22 89999999999999987654
No 124
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=93.26 E-value=0.18 Score=42.83 Aligned_cols=91 Identities=13% Similarity=0.047 Sum_probs=57.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec---CCCc---ceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKS---CTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~A---D~ylLk~m 141 (202)
..++|++ |+|.++..+++. |.. |. +..+..+....+.. ++.+|++++ +++ +... |+++.-
T Consensus 125 ~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~--~l~~~v~~~~~D~~~~~~~~f~~~D~Ivsn-- 199 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERH--GVSDRFFVRKGEFLEPFKEKFASIEMILSN-- 199 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHT--TCTTSEEEEESSTTGGGGGGTTTCCEEEEC--
T ss_pred CEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECcchhhcccccCCCCEEEEc--
Confidence 4699998 999999999999 764 22 23334444444322 566678887 433 3345 776543
Q ss_pred cccccc---------cccCCCCHHH-------HHHHHHHHH-hhCCCCCEEEE
Q 044941 142 YNVKFQ---------WVLTTWTDDE-------CKLIMENCY-KALPAGGKLIA 177 (202)
Q Consensus 142 ~~~P~k---------~VLHdW~Dee-------~~~IL~~~~-~AL~~gGrLlI 177 (202)
|+. .+. |.... ...+|+++. ..++|||.+++
T Consensus 200 ---PPyi~~~~~l~~~v~--~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 200 ---PPYVKSSAHLPKDVL--FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp ---CCCBCGGGSCTTSCC--CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred ---CCCCCcccccChhhc--cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 220 012 33222 338999999 99999999875
No 125
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=93.24 E-value=0.094 Score=43.58 Aligned_cols=99 Identities=12% Similarity=0.052 Sum_probs=58.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-~~AD~ylLk~m~~ 143 (202)
..++|+| |+|.++..+++.+|.. |. +.....+....+.. ++. ++++. ++ +| ...|+++..--|.
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~-~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL--AIK-NIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH--TCC-SEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred CEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEcchhhhcccCCccEEEECCCCC
Confidence 4799998 9999999999998874 32 22223333332211 222 56666 33 23 3468877642211
Q ss_pred ccc-----ccccCCCC----------HHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 144 VKF-----QWVLTTWT----------DDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 144 ~P~-----k~VLHdW~----------Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
... ..+++... -+...++++.++..|+|||.+++.
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 000 00222111 145688999999999999998775
No 126
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=93.21 E-value=0.12 Score=42.87 Aligned_cols=88 Identities=8% Similarity=0.009 Sum_probs=58.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--e---ecC---------CCcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--H---FYP---------NKSC 134 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--h---ffP---------~~AD 134 (202)
..++|+| |.|..+..+++..|. . |. +.....+..+++. .++.++++++ + +.| ...|
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK--AGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH--TTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--cCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 4699998 999999999999883 2 22 2223344444443 2566788876 2 222 3357
Q ss_pred eeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 135 TLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 135 ~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++++.. + .......|+.++..|+|||.|++-+
T Consensus 159 ~V~~d~-----------~--~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDA-----------D--KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECS-----------C--STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcC-----------c--hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 776543 1 2346789999999999999987654
No 127
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=93.21 E-value=0.049 Score=47.38 Aligned_cols=94 Identities=13% Similarity=0.000 Sum_probs=56.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--ee---c---CCCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HF---Y---PNKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hf---f---P~~AD~ylLk~ 140 (202)
.++.|+| |.|.++..+++..|.. ++ +.....|..+++..++++ ..|++++ +. . +...|++++--
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~ 189 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDS 189 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECC
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcC
Confidence 5799998 9999999999876642 32 334455555554322234 5688877 32 2 34578888642
Q ss_pred hcccccccccCCCCH-HH--HHHHHHHHHhhCCCCCEEEEee
Q 044941 141 MYNVKFQWVLTTWTD-DE--CKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 141 m~~~P~k~VLHdW~D-ee--~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.+.+.. +. ..++|++++..|+|||.+++..
T Consensus 190 ---------~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 190 ---------SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ---------C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred ---------CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 122222 22 1789999999999999987753
No 128
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=93.13 E-value=0.067 Score=44.52 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=58.1
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Ccc---ccccccchhhhc-cCCCCCCceeee--ee-----------cC-CCc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GTE---HDKAHCPLHLKT-GACRFGQRCSRV--HF-----------YP-NKS 133 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl~---~d~~~~~~~~k~-gacr~~dRcs~v--hf-----------fP-~~A 133 (202)
...++|+| |+|.++..+++++|.. ++. .....|....+. +..++.+|++++ ++ ++ ...
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 35799998 9999999999999863 222 222333333322 002456678777 32 12 346
Q ss_pred ceeeeehhccc------cc--ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 134 CTLLIKNMYNV------KF--QWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 134 D~ylLk~m~~~------P~--k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
|+++..--|.. |. ..+.+.........+|+.++..|++||+++++
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 87766421110 00 01112223334678899999999999999774
No 129
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=92.91 E-value=0.074 Score=45.56 Aligned_cols=96 Identities=10% Similarity=0.037 Sum_probs=56.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhc-cCCCCCCceeee--ee--c----C-CCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKT-GACRFGQRCSRV--HF--Y----P-NKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~-gacr~~dRcs~v--hf--f----P-~~AD~ylL 138 (202)
..++.|+| |.|.++..+++..|.. |+ +.....|..++.. .......|++++ +. + + ...|++++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 35799997 9999999999865542 22 2333445444421 111234577776 32 1 2 34798887
Q ss_pred ehhcccccccccCCCCHHHH--HHHHHHHHhhCCCCCEEEEee
Q 044941 139 KNMYNVKFQWVLTTWTDDEC--KLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee~--~~IL~~~~~AL~~gGrLlI~E 179 (202)
-. ..+.+..... .++|++++..|+|||.+++..
T Consensus 176 d~--------~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 176 DT--------TDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EC--------C---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--------CCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 54 2344443333 689999999999999998763
No 130
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=92.79 E-value=0.17 Score=40.75 Aligned_cols=87 Identities=11% Similarity=0.017 Sum_probs=51.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---CccccccccchhhhccCCCCCCceeee--ee------cC--CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF------YP--NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf------fP--~~AD~ylLk~m~ 142 (202)
..++|+| |+|.++..+++.+|.- ++......+....+.. ....++.+. +. +| ...|+++
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~----- 148 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDAC--AERENIIPILGDANKPQEYANIVEKVDVIY----- 148 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHT--TTCTTEEEEECCTTCGGGGTTTSCCEEEEE-----
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHh--hcCCCeEEEECCCCCcccccccCccEEEEE-----
Confidence 5799998 9999999999998741 2222111111111111 111456654 22 11 2235444
Q ss_pred ccccccccCCCCH-HHHHHHHHHHHhhCCCCCEEEEe
Q 044941 143 NVKFQWVLTTWTD-DECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 143 ~~P~k~VLHdW~D-ee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
|+..+ ++...+|++++..|+|||++++.
T Consensus 149 --------~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 --------EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp --------ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 44443 34566799999999999999886
No 131
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=92.78 E-value=0.061 Score=43.29 Aligned_cols=91 Identities=10% Similarity=0.148 Sum_probs=53.5
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee------cCC-Ccceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF------YPN-KSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf------fP~-~AD~ylLk 139 (202)
...++|+| |+|.++..+++.+|.. |. +..+..|....+.. ++ .+++++ +. ||. ..|.+++-
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~--~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS--EA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS--CC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc--CC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 34699998 9999999999999974 22 12222333322211 22 245555 21 343 34665542
Q ss_pred hhcccccccccCCCCHH-------HHHHHHHHHHhhCCCCCEEEEe
Q 044941 140 NMYNVKFQWVLTTWTDD-------ECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~De-------e~~~IL~~~~~AL~~gGrLlI~ 178 (202)
. +. .|... ....+|+.++..|+|||.|++.
T Consensus 116 ~--~~-------p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 116 F--SD-------PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp S--CC-------CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred C--CC-------CCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 1 11 12211 1357899999999999999765
No 132
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=92.76 E-value=0.049 Score=47.95 Aligned_cols=88 Identities=14% Similarity=0.097 Sum_probs=56.6
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-Ccccc---ccccchhhhccCCCCCCceeee---e--e--cC-CCcceeeeehhc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-GTEHD---KAHCPLHLKTGACRFGQRCSRV---H--F--YP-NKSCTLLIKNMY 142 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d---~~~~~~~~k~gacr~~dRcs~v---h--f--fP-~~AD~ylLk~m~ 142 (202)
..+++|+| |.|.++..++++..++ ++... ...|... ++..+..+. + . ++ ...|+++..+
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~-- 179 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK------GIRVRTDFFEKATADDVRRTEGPANVIYAAN-- 179 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT------TCCEECSCCSHHHHHHHHHHHCCEEEEEEES--
T ss_pred CCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc------CCCcceeeechhhHhhcccCCCCEEEEEECC--
Confidence 35799998 9999999999864432 21111 1111111 121122111 1 1 22 5589999998
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++|.+. +....|++++..|+|||.+++..
T Consensus 180 ------vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 180 ------TLCHIP--YVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp ------CGGGCT--THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------hHHhcC--CHHHHHHHHHHHcCCCeEEEEEe
Confidence 777886 46789999999999999998864
No 133
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=92.70 E-value=0.064 Score=45.49 Aligned_cols=93 Identities=12% Similarity=0.126 Sum_probs=58.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--ee---c---CCCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HF---Y---PNKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hf---f---P~~AD~ylLk~ 140 (202)
.++.|+| |.|.++..+++..|.. +. +.....|..++....+++ ..|++++ +. . +...|++++-.
T Consensus 80 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 159 (283)
T 2i7c_A 80 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 159 (283)
T ss_dssp CEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcC
Confidence 5799997 9999999999766542 22 333444555543211123 4577776 32 2 34579888743
Q ss_pred hcccccccccCCCC-HHHH--HHHHHHHHhhCCCCCEEEEe
Q 044941 141 MYNVKFQWVLTTWT-DDEC--KLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 141 m~~~P~k~VLHdW~-Dee~--~~IL~~~~~AL~~gGrLlI~ 178 (202)
. ..+. .+.. .++|+++++.|+|||.+++.
T Consensus 160 ~---------~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 160 S---------DPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp C---------CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred C---------CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1 1122 1222 68999999999999998776
No 134
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=92.61 E-value=0.061 Score=42.57 Aligned_cols=91 Identities=12% Similarity=0.001 Sum_probs=58.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--ee---cCC--Ccceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YPN--KSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP~--~AD~ylLk~m 141 (202)
..++|+| |.|..+..+++..|. . |. +.....+...++. .++.+++++. +. .|. +.|++++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~- 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD--NGLIDRVELQVGDPLGIAAGQRDIDILFMDC- 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH--HSGGGGEEEEESCHHHHHTTCCSEEEEEEET-
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--CCCCceEEEEEecHHHHhccCCCCCEEEEcC-
Confidence 4799998 999999999998873 1 22 2223334444332 2456678877 32 232 167666542
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
+..+...+|++++..|+|||.|++.+.+.
T Consensus 135 ------------~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 ------------DVFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp ------------TTSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred ------------ChhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 22345788999999999999887755443
No 135
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=92.54 E-value=0.23 Score=40.49 Aligned_cols=92 Identities=11% Similarity=0.022 Sum_probs=52.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Ccc-ccc----cccchhhhccCCCCCCceeee--e--ecCCC-cceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTE-HDK----AHCPLHLKTGACRFGQRCSRV--H--FYPNK-SCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~-~d~----~~~~~~~k~gacr~~dRcs~v--h--ffP~~-AD~ylLk~ 140 (202)
..++|+| |.|.++..+++++|.. |.. ... ..+....+.. ++. .+.+. + -+|.. .|++..-.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~--~~~-~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG--GLS-NVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT--CCS-SEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc--CCC-CeEEEEcCHHHhhhhccCeEEEEE
Confidence 4699998 9999999999888873 322 222 1112222111 222 34554 2 13532 24333222
Q ss_pred hcccccccccCCCCHHH------HHHHHHHHHhhCCCCCEEEEee
Q 044941 141 MYNVKFQWVLTTWTDDE------CKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee------~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+...|.... ....|++++..|+|||+++++.
T Consensus 103 --------~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 --------ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp --------EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred --------EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 223444321 1357999999999999998843
No 136
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=92.47 E-value=0.057 Score=42.26 Aligned_cols=86 Identities=9% Similarity=0.045 Sum_probs=55.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec---C-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~~AD~ylLk~m~~ 143 (202)
..++|+| |.|.++..+++.+|.. |. +.....+....+.. ++.+ +++. ++. | ...|+++...
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~-v~~~~~d~~~~~~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL--KLEN-IEPVQSRVEEFPSEPPFDGVISRA--- 140 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT--TCSS-EEEEECCTTTSCCCSCEEEEECSC---
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc--CCCC-eEEEecchhhCCccCCcCEEEEec---
Confidence 4799998 9999999999998864 21 22223333333221 3333 6665 332 3 3468877543
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.++ ...+|+.++..|+|||.+++..
T Consensus 141 ------~~~-----~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 ------FAS-----LNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ------SSS-----HHHHHHHHTTSEEEEEEEEEEE
T ss_pred ------cCC-----HHHHHHHHHHhcCCCcEEEEEe
Confidence 222 4589999999999999998874
No 137
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=92.47 E-value=0.068 Score=43.65 Aligned_cols=90 Identities=9% Similarity=0.145 Sum_probs=59.4
Q ss_pred ceeecC-ChHHHHHHHHHHCCCC------Cc-cccccccchhhhccCCCCC-Cceeee--e---ecC----CCcceeeee
Q 044941 78 AFADHQ-NAQQALETVAQQVPNF------GT-EHDKAHCPLHLKTGACRFG-QRCSRV--H---FYP----NKSCTLLIK 139 (202)
Q Consensus 78 ~~~d~~-g~G~ll~~ll~~~P~l------dl-~~d~~~~~~~~k~gacr~~-dRcs~v--h---ffP----~~AD~ylLk 139 (202)
+++|+| |.|..+..++++.|.- |. +.....+..+++.. ++. +|++++ + +.| ...|++++.
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 689998 9999999999988631 22 22233444444432 566 788887 3 222 346777654
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
. +..+....|+.+++.|+|||.|++-+.+.
T Consensus 137 ~-------------~~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 137 V-------------SPMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp C-------------CTTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred C-------------cHHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3 22345668999999999999888755543
No 138
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=92.41 E-value=0.1 Score=40.67 Aligned_cols=96 Identities=6% Similarity=0.003 Sum_probs=61.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..++..... + |. +.....+....+. .+.++++. ++ +| ...|+++..+
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--- 97 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRE----NNFKLNISKGDIRKLPFKDESMSFVYSYG--- 97 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHH----HTCCCCEEECCTTSCCSCTTCEEEEEECS---
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh----cCCceEEEECchhhCCCCCCceeEEEEcC---
Confidence 4799998 888764444443221 1 21 1222223322211 12344444 32 33 3479998887
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
++|.++.++..++|++++..|+|||.+++.+...++
T Consensus 98 -----~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 98 -----TIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp -----CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred -----hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 778888899999999999999999999998876544
No 139
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=92.30 E-value=0.037 Score=45.30 Aligned_cols=23 Identities=13% Similarity=0.144 Sum_probs=20.6
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN 98 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ 98 (202)
...++|+| |.|.++..+++.+|.
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~ 73 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPE 73 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTT
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCC
Confidence 35699998 999999999999987
No 140
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=92.28 E-value=0.046 Score=46.95 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=32.0
Q ss_pred CCcceeeeehhcccccccccCC-CCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 131 NKSCTLLIKNMYNVKFQWVLTT-WTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 131 ~~AD~ylLk~m~~~P~k~VLHd-W~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
...|+++... ++|- |+.++..++|++++..|+|||.+++...
T Consensus 128 ~~FD~V~~~~--------~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 128 GKFNIIDWQF--------AIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp SCEEEEEEES--------CGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECc--------hHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3478887665 5553 5655668999999999999999976543
No 141
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=92.20 E-value=0.24 Score=49.62 Aligned_cols=94 Identities=10% Similarity=0.068 Sum_probs=62.6
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC------Cc-cccccccchhhhc--cCCC-CCCceeee--ee--c--C-CCcceee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF------GT-EHDKAHCPLHLKT--GACR-FGQRCSRV--HF--Y--P-NKSCTLL 137 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l------dl-~~d~~~~~~~~k~--gacr-~~dRcs~v--hf--f--P-~~AD~yl 137 (202)
..+++|+| |.|.++..+++..+.. |. +..+..+...++. .+-+ -..++++. +. + + ...|+++
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 34799998 9999999999988421 22 2222333322211 0001 11366666 33 2 2 4589999
Q ss_pred eehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 138 IKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 138 Lk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
... ++|.+.+++...++++++..|+|| .++|.
T Consensus 802 ~~e--------VLeHL~dp~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 802 CLE--------VIEHMEEDQACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp EES--------CGGGSCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred EeC--------chhhCChHHHHHHHHHHHHHcCCC-EEEEE
Confidence 987 889999999999999999999998 55544
No 142
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=92.05 E-value=0.4 Score=35.35 Aligned_cols=86 Identities=14% Similarity=0.068 Sum_probs=53.1
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC---CccccccccchhhhccCCCCCCceeee--ee------------cC-CCccee
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF------------YP-NKSCTL 136 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf------------fP-~~AD~y 136 (202)
..++|+| |.|.++..+++.+ |.. +..... .. .. .++++. ++ ++ ...|++
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~----~~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MD----PI------VGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CC----CC------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cc----cc------CcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 4799998 9999999999985 542 111111 11 00 234443 22 33 347888
Q ss_pred eeehhcccccccccCCCCH---HH------HHHHHHHHHhhCCCCCEEEEeeec
Q 044941 137 LIKNMYNVKFQWVLTTWTD---DE------CKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 137 lLk~m~~~P~k~VLHdW~D---ee------~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
+... .+|...+ +. ..++|++++..|++||.+++....
T Consensus 93 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 93 MSDM--------APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EECC--------CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EECC--------CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 8765 3332221 22 268999999999999999886653
No 143
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=91.96 E-value=0.11 Score=44.55 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=55.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCC-CC-CCceeee--e---ec---CCCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGAC-RF-GQRCSRV--H---FY---PNKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gac-r~-~dRcs~v--h---ff---P~~AD~ylL 138 (202)
..++.|+| |.|.++.++++..|.- ++ +.....|..++....+ .+ ..|++++ | +. +...|+++.
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 35799997 9999999999865542 32 3344555555432111 13 3477776 4 22 234788877
Q ss_pred ehhcccccccccCCCCHHH--HHHHHHHHHhhCCCCCEEEEe
Q 044941 139 KNMYNVKFQWVLTTWTDDE--CKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee--~~~IL~~~~~AL~~gGrLlI~ 178 (202)
-- . .+.-..+. ..+.|+.+++.|+|||.+++.
T Consensus 164 D~-~-------~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 164 DC-T-------DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CC------------------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred CC-C-------CccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 32 1 01111111 167899999999999998775
No 144
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=91.93 E-value=0.046 Score=44.78 Aligned_cols=96 Identities=13% Similarity=0.122 Sum_probs=58.2
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC----Cc-cccccccchhhhccCCCCCCceeee--e------ecCC-Ccceeeeeh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF----GT-EHDKAHCPLHLKTGACRFGQRCSRV--H------FYPN-KSCTLLIKN 140 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l----dl-~~d~~~~~~~~k~gacr~~dRcs~v--h------ffP~-~AD~ylLk~ 140 (202)
+.++.|+| |.|..+..+++..|.- +. +.....+....+. .+.++.+. + .+|. ..|.+++--
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR----QTHKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG----CSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred CCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh----CCCceEEEeehHHhhcccccccCCceEEEee
Confidence 46899998 9999999998877751 21 2333444433322 22233333 2 1343 356665422
Q ss_pred hcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 141 MYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
+.. ..+.+.-.+...+|+.++..|+|||+++.++.
T Consensus 137 ~~~-----~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~ 171 (236)
T 3orh_A 137 YPL-----SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCC-----BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred eec-----ccchhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence 110 12445556678899999999999999988764
No 145
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=91.89 E-value=0.37 Score=41.72 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=60.9
Q ss_pred cceeecC-Ch---HHHHHHHHHHCCCC-----C-ccccccccchhhhccCCCCCCceeee--eec-C----------CCc
Q 044941 77 EAFADHQ-NA---QQALETVAQQVPNF-----G-TEHDKAHCPLHLKTGACRFGQRCSRV--HFY-P----------NKS 133 (202)
Q Consensus 77 ~~~~d~~-g~---G~ll~~ll~~~P~l-----d-l~~d~~~~~~~~k~gacr~~dRcs~v--hff-P----------~~A 133 (202)
-.|+|+| |. |.+..-+.+..|.. | .+..+..++..+... -..+++++ |+. | ...
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEecccChhhhhccccccccc
Confidence 3599998 43 44444444567874 3 355666776554321 12467776 332 1 112
Q ss_pred c-----eeeeehhcccccccccCCCCHHH-HHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 134 C-----TLLIKNMYNVKFQWVLTTWTDDE-CKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 134 D-----~ylLk~m~~~P~k~VLHdW~Dee-~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
| .+++.. +||-..|++ ...+|++++.+|+|||.|++.+...+
T Consensus 157 D~~~p~av~~~a--------vLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 157 DLTRPVALTVIA--------IVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CTTSCCEEEEES--------CGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcCCcchHHhhh--------hHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 3 344433 788888876 68999999999999999999886654
No 146
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=91.84 E-value=0.088 Score=41.92 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=58.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC--------CCcce
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--------NKSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--------~~AD~ 135 (202)
..++|+| |.|.++..+++..|. . |. +.....+...++.. ++.++++++ +. .+ ...|+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 4689997 999999999998873 1 21 22233344444322 456788876 32 12 34577
Q ss_pred eeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 136 LLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
+++-. +......+|+.+++.|+|||.|++.+.+
T Consensus 149 v~~d~-------------~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 149 AVVDA-------------DKENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEECS-------------CSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EEECC-------------CHHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 66542 2345578899999999999999887654
No 147
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=91.84 E-value=0.11 Score=42.46 Aligned_cols=88 Identities=8% Similarity=-0.022 Sum_probs=58.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC------Cc-cccccccchhhhccCCCCCCceeee--ee---cC---------CCcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF------GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP---------NKSC 134 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l------dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP---------~~AD 134 (202)
..++|+| |.|..+..++++.|.- |. +.....+..+++.. ++.+|+++. +. .| ...|
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 3689997 9999999999998842 22 22234444554432 566788877 32 12 2356
Q ss_pred eeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 135 TLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 135 ~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++++- .+......+|+.++..|+|||.|++-+
T Consensus 150 ~I~~d-------------~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVD-------------ADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEC-------------SCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEC-------------CchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 66543 234567889999999999999876544
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=91.83 E-value=0.17 Score=41.16 Aligned_cols=45 Identities=18% Similarity=0.244 Sum_probs=32.8
Q ss_pred CcceeeeehhcccccccccCCCC----HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 132 KSCTLLIKNMYNVKFQWVLTTWT----DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 132 ~AD~ylLk~m~~~P~k~VLHdW~----Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
..|+++...-|. ..++|. .+...++|++++..|+|||.++++..-
T Consensus 168 ~fD~Iv~npp~~-----~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 168 APDVVLTDLPYG-----ERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCSEEEEECCGG-----GSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CceEEEeCCCee-----ccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 478887654221 224454 588899999999999999999886543
No 149
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=91.81 E-value=0.082 Score=41.45 Aligned_cols=90 Identities=7% Similarity=-0.056 Sum_probs=56.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--eec---CCCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---PNKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++ ++.. |. +.....+....+.. ++.+ +++. ++. +...|+++....
T Consensus 62 ~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~-v~~~~~d~~~~~~~~fD~i~~~~~--- 134 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALN--GIYD-IALQKTSLLADVDGKFDLIVANIL--- 134 (205)
T ss_dssp CEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHT--TCCC-CEEEESSTTTTCCSCEEEEEEESC---
T ss_pred CEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHc--CCCc-eEEEeccccccCCCCceEEEECCc---
Confidence 5799998 99999888776 4441 22 22223344333321 3333 5665 332 456788877652
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
+ +...++|+++++.|++||++++.+....
T Consensus 135 -----~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 135 -----A-----EILLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp -----H-----HHHHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred -----H-----HHHHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 2 3357889999999999999998765543
No 150
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=91.76 E-value=0.27 Score=41.23 Aligned_cols=92 Identities=7% Similarity=0.027 Sum_probs=55.3
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---Cc--cccccccchhhhc---cCCCCC----Cceeeee---------ec----
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GT--EHDKAHCPLHLKT---GACRFG----QRCSRVH---------FY---- 129 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl--~~d~~~~~~~~k~---gacr~~----dRcs~vh---------ff---- 129 (202)
.+++|+| |.|.++..+++... .+ |. +..+..+....+. ...++. +++++.. +.
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 4799998 99999988887643 22 33 2223333333310 111232 4566541 11
Q ss_pred CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCC---C--CCEEEEe
Q 044941 130 PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALP---A--GGKLIAC 178 (202)
Q Consensus 130 P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~---~--gGrLlI~ 178 (202)
+...|++++.+ ++++. ++...+|+.++..|+ + ||+++++
T Consensus 161 ~~~fD~Ii~~d--------vl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 161 LQRFQVVLLAD--------LLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp CSSBSEEEEES--------CCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCCCCEEEEeC--------cccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 24579999887 55553 456788999999999 9 9997664
No 151
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=91.70 E-value=0.077 Score=44.78 Aligned_cols=95 Identities=11% Similarity=0.080 Sum_probs=58.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCC----CCCCceeee--ee--------cC--C-C
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGAC----RFGQRCSRV--HF--------YP--N-K 132 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gac----r~~dRcs~v--hf--------fP--~-~ 132 (202)
.+++|+| |.|.++..+++. +.. |. +..+..|......... ....++++. +. |+ . .
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 4799998 899999988874 321 21 1222223322211000 012345555 32 21 1 4
Q ss_pred cceeeeehhcccccccccCCC--CHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 133 SCTLLIKNMYNVKFQWVLTTW--TDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 133 AD~ylLk~m~~~P~k~VLHdW--~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
.|+++... ++|.. +.++...+|++++..|+|||.+++...
T Consensus 115 fD~V~~~~--------~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 115 FDICSCQF--------VCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp EEEEEEET--------CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEEEEec--------chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 79988877 66654 457788999999999999999987643
No 152
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=91.68 E-value=0.16 Score=39.81 Aligned_cols=85 Identities=11% Similarity=0.045 Sum_probs=52.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-Cc---cccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehhcc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNMYN 143 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m~~ 143 (202)
..+++|+| |.|.++..+++...++ ++ +.....+...++.. ++. ++++. +. .+ ...|++++..
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~--- 151 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL--DLH-NVSTRHGDGWQGWQARAPFDAIIVTA--- 151 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHT--TCC-SEEEEESCGGGCCGGGCCEEEEEESS---
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc--CCC-ceEEEECCcccCCccCCCccEEEEcc---
Confidence 35799998 9999999999884332 22 22223333333221 232 56665 32 22 3479998887
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.+|...+ .+++.|+|||++++.-
T Consensus 152 -----~~~~~~~--------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 152 -----APPEIPT--------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp -----BCSSCCT--------HHHHTEEEEEEEEEEE
T ss_pred -----chhhhhH--------HHHHhcccCcEEEEEE
Confidence 5566664 4778899999987753
No 153
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.61 E-value=0.059 Score=44.18 Aligned_cols=87 Identities=9% Similarity=0.004 Sum_probs=52.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccc---ccccccchhhhccCCCCCCceeeeee----cC-CCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTE---HDKAHCPLHLKTGACRFGQRCSRVHF----YP-NKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~---~d~~~~~~~~k~gacr~~dRcs~vhf----fP-~~AD~ylLk~m~~~P~ 146 (202)
.+++|+| |.|.++..+++...++ ++. ..+..+..... ..+...++ +| ...|+++..+
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~-------~~~~~~d~~~~~~~~~~fD~v~~~~------ 122 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV-------KNVVEAKAEDLPFPSGAFEAVLALG------ 122 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC-------SCEEECCTTSCCSCTTCEEEEEECS------
T ss_pred CeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC-------CCEEECcHHHCCCCCCCEEEEEEcc------
Confidence 4799998 9999999998863222 111 11122221111 11111132 33 3468888766
Q ss_pred ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 147 QWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+++.|.++ ..++|++++..|+|||++++..
T Consensus 123 --~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 123 --DVLSYVEN-KDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp --SHHHHCSC-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred --hhhhcccc-HHHHHHHHHHHcCCCeEEEEEe
Confidence 33344222 7889999999999999998765
No 154
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=91.51 E-value=0.058 Score=44.55 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=50.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cccc---cccccchhhhc----cCCCCCCceeee--e---e----cCC-Ccce
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTEH---DKAHCPLHLKT----GACRFGQRCSRV--H---F----YPN-KSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~~---d~~~~~~~~k~----gacr~~dRcs~v--h---f----fP~-~AD~ 135 (202)
..++|+| |.|.++..+++++|.. ++.. .+..|....+. ...++ .+++++ + + ||. ..|.
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcCeeE
Confidence 4689998 9999999999999973 3222 22222221110 00011 245554 2 1 333 2466
Q ss_pred eeeehhcccccccccCCCCHH--H-----HHHHHHHHHhhCCCCCEEEEe
Q 044941 136 LLIKNMYNVKFQWVLTTWTDD--E-----CKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~De--e-----~~~IL~~~~~AL~~gGrLlI~ 178 (202)
+++- |. -.|... . ...+|+.++..|+|||.|++.
T Consensus 127 v~~~--~~-------dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 127 MFFL--FP-------DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEE--SC-------C-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEe--CC-------CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 5542 11 123211 0 136899999999999999765
No 155
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=91.38 E-value=0.82 Score=37.37 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=53.5
Q ss_pred cceeecC-ChHHHHHHHHHH----CCCC---CccccccccchhhhccCCCCCCceeee--e---e--cC---C-Ccceee
Q 044941 77 EAFADHQ-NAQQALETVAQQ----VPNF---GTEHDKAHCPLHLKTGACRFGQRCSRV--H---F--YP---N-KSCTLL 137 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~----~P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--h---f--fP---~-~AD~yl 137 (202)
..++|+| |+|..+..+++. .|.. ++......+ +.. .++.++++++ + + +| . ..|+++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l----~~a-~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRC----QIP-ASDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTC----CCC-GGGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHH----HHH-hccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 4799998 999999999887 5652 221111111 111 0234567766 2 1 22 2 368777
Q ss_pred eehhcccccccccCCCCHHHHHHHHHHHHh-hCCCCCEEEEeee
Q 044941 138 IKNMYNVKFQWVLTTWTDDECKLIMENCYK-ALPAGGKLIACEP 180 (202)
Q Consensus 138 Lk~m~~~P~k~VLHdW~Dee~~~IL~~~~~-AL~~gGrLlI~E~ 180 (202)
+.. .|. +..++|+.++. .|+|||++++.+.
T Consensus 158 ~d~---------~~~----~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 158 IDN---------AHA----NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EES---------SCS----SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ECC---------chH----hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 654 243 45678999996 9999999998764
No 156
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=91.27 E-value=0.1 Score=45.23 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=58.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--ee---c---CCCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HF---Y---PNKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hf---f---P~~AD~ylLk~ 140 (202)
.++.|+| |.|.++..+++..|.. |. +.....|..+++.-++++ ..|++++ +. . +...|++++-.
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~ 197 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 197 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECC
Confidence 5799997 9999999999865542 22 333444555443211234 4678777 32 2 34578888642
Q ss_pred hcccccccccCCCCH-HH--HHHHHHHHHhhCCCCCEEEEe
Q 044941 141 MYNVKFQWVLTTWTD-DE--CKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 141 m~~~P~k~VLHdW~D-ee--~~~IL~~~~~AL~~gGrLlI~ 178 (202)
+ ..|.. +. ..++|+++++.|+|||.+++.
T Consensus 198 -~--------~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 198 -S--------DPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp -C--------CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred -c--------CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1 11211 11 268999999999999998775
No 157
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=91.12 E-value=0.18 Score=44.34 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=59.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee--e---e---cC-CCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--H---F---YP-NKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--h---f---fP-~~AD~ylLk~ 140 (202)
..+.|+| |.|.++..+++.+|.. ++ +.....|..++.. ....|++++ | + ++ ...|++++--
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~---~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI---PRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC---CCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc---cCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 4799998 9999999999999985 21 2334445555432 124578776 3 2 23 4579887743
Q ss_pred hcccccccccCCCCHHH--HHHHHHHHHhhCCCCCEEEEee
Q 044941 141 MYNVKFQWVLTTWTDDE--CKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee--~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+. +...... ..+.|+.|+..|++||.+++.-
T Consensus 168 -~~-------~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 168 -FA-------GAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp -ST-------TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CC-------ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 21 1111111 2578999999999999886654
No 158
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=91.01 E-value=0.12 Score=42.82 Aligned_cols=87 Identities=14% Similarity=0.202 Sum_probs=56.3
Q ss_pred cceeecC-ChHHHHHHHHHH-CCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC-CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQ-VPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~-~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-~~AD~ylLk~m~ 142 (202)
..++|+| |+|.++..++++ .|.. |. +.....+....+.. ++.+++++. ++ +| ...|++++.-
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~D~V~~~~-- 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--GLIERVTIKVRDISEGFDEKDVDALFLDV-- 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--TCGGGEEEECCCGGGCCSCCSEEEEEECC--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CCCCCEEEEECCHHHcccCCccCEEEECC--
Confidence 4799997 999999999998 5653 32 22233333333321 344577776 33 45 3468877621
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
. +...+|++++..|+|||++++...
T Consensus 190 -----------~--~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 190 -----------P--DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp -----------S--CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred -----------c--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1 113788999999999999988774
No 159
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=90.96 E-value=0.13 Score=43.39 Aligned_cols=93 Identities=8% Similarity=-0.071 Sum_probs=57.2
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC--------CCceeee--ee---c--CCCc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF--------GQRCSRV--HF---Y--PNKS 133 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~--------~dRcs~v--hf---f--P~~A 133 (202)
..++.|+| |.|.++..+++. |.- ++ +.....|..++ ..++++ ..|++++ +. . +...
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 35799997 899999999987 652 22 23344455544 211233 4577776 32 2 4457
Q ss_pred ceeeeehhcccccccccCCCCHHH--HHHHHHHHHhhCCCCCEEEEe
Q 044941 134 CTLLIKNMYNVKFQWVLTTWTDDE--CKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 134 D~ylLk~m~~~P~k~VLHdW~Dee--~~~IL~~~~~AL~~gGrLlI~ 178 (202)
|++++-.. .+....+. ..++|+++++.|+|||.+++.
T Consensus 154 D~Ii~d~~--------~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 154 DVIIADST--------DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEEECC--------CCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCC--------CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 88887531 12111122 367899999999999998775
No 160
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=90.88 E-value=0.082 Score=39.63 Aligned_cols=90 Identities=10% Similarity=-0.007 Sum_probs=52.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee---cC------CCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP------NKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP------~~AD~ylLk~ 140 (202)
..++|++ |.|.++..+++..+++ |. +.....+....+.. ++ ++++. ++ .| ...|++++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT--GL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH--TC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc--CC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 4699998 9999999999987763 22 22223333333221 22 56665 32 22 1478887765
Q ss_pred hcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 141 MYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
..| -..++..+.+.+ ++.|+|||.+++.-.
T Consensus 119 --------~~~-~~~~~~~~~~~~-~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 119 --------PYA-MDLAALFGELLA-SGLVEAGGLYVLQHP 148 (171)
T ss_dssp --------CTT-SCTTHHHHHHHH-HTCEEEEEEEEEEEE
T ss_pred --------CCc-hhHHHHHHHHHh-hcccCCCcEEEEEeC
Confidence 334 223334443433 588999999877554
No 161
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=90.82 E-value=0.1 Score=45.55 Aligned_cols=90 Identities=11% Similarity=0.057 Sum_probs=57.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCC--C---CccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN--F---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~--l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~ 143 (202)
..++|+| |.|.++..++++ +. + |.......+....+.. ++.++++++ +. +| ...|+++...|..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKAN--KLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHT--TCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHc--CCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 4699998 999999999987 33 1 2222223333333322 577788887 32 35 4579988754321
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEE
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLI 176 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLl 176 (202)
.++. .+....+|+.++..|+|||.++
T Consensus 145 -----~l~~--~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 145 -----CLFY--ESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp -----TBTB--TCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----cccC--chhHHHHHHHHHHhCCCCCEEc
Confidence 2222 3345578899999999999985
No 162
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=90.72 E-value=0.46 Score=38.19 Aligned_cols=88 Identities=10% Similarity=-0.002 Sum_probs=50.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCCCccccccccch----hhhccCCCCCCceeee--e--------ecCCCcceeeeeh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPL----HLKTGACRFGQRCSRV--H--------FYPNKSCTLLIKN 140 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~----~~k~gacr~~dRcs~v--h--------ffP~~AD~ylLk~ 140 (202)
...++|+| |+|.++..+++..+.. ...-.+..+. ..+.. +-...+.++ + .++...|+++..
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~-~V~gvD~s~~~l~~~~~~a--~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~- 133 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELV--RERNNIIPLLFDASKPWKYSGIVEKVDLIYQD- 133 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHH--HHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCC-EEEEEECCHHHHHHHHHHH--hcCCCeEEEEcCCCCchhhcccccceeEEEEe-
Confidence 35799998 9999999999988741 1111111111 11110 000123332 1 123346777653
Q ss_pred hcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 141 MYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
+.+. ++...+|++++..|+|||++++.
T Consensus 134 --------~~~~---~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 134 --------IAQK---NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp --------CCST---THHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------ccCh---hHHHHHHHHHHHHhCCCCEEEEE
Confidence 2222 34556699999999999999887
No 163
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=90.69 E-value=0.15 Score=42.79 Aligned_cols=91 Identities=10% Similarity=-0.012 Sum_probs=61.1
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--eec---C-CCcceeeeehhcc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-NKSCTLLIKNMYN 143 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~~AD~ylLk~m~~ 143 (202)
...++|++ |.|.++..+++..+. . |. +.....+....+.. ++.+++++. +.+ + ...|++++...
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n--~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPGENIADRILMGYV-- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCCCSCEEEEEECCC--
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEECCHHHhcccCCccEEEECCc--
Confidence 35799997 999999999998875 3 32 22333344443332 566778777 432 2 34788877431
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
. ...++|+.++..|+|||.+++.++.-
T Consensus 202 ---------~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 202 ---------V---RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ---------S---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---------h---hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 1 11678888999999999999988763
No 164
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=90.66 E-value=0.25 Score=39.81 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=52.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-Cc---cccccccchhhhccCCCCCCceeee--ee---cCCC--cceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---YPNK--SCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP~~--AD~ylLk~m~~ 143 (202)
.+++|+| |.|.++..+++..|. + ++ +.....+...++.. ++. .+++. ++ +|.. .|++++..
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~-~v~~~~~d~~~~~~~~~~fD~Ii~~~--- 166 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA--GVK-NVHVILGDGSKGFPPKAPYDVIIVTA--- 166 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT--TCC-SEEEEESCGGGCCGGGCCEEEEEECS---
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc--CCC-CcEEEECCcccCCCCCCCccEEEECC---
Confidence 4799998 999999999998862 1 11 12222333333221 232 35555 32 3432 69998887
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+++.+.+ ++++.|+|||++++.-
T Consensus 167 -----~~~~~~~--------~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 167 -----GAPKIPE--------PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp -----BBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred -----cHHHHHH--------HHHHhcCCCcEEEEEE
Confidence 5666654 5677899999987753
No 165
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=90.60 E-value=0.063 Score=45.42 Aligned_cols=95 Identities=12% Similarity=-0.014 Sum_probs=58.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--ee---c---CCCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HF---Y---PNKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hf---f---P~~AD~ylLk 139 (202)
..++.|+| |.|.++.++++..|.- ++ +.....|..++..-++.+ ..|++++ +. . +...|++++-
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 35799997 8999999999765542 22 334455555543211123 4688877 42 2 3457888874
Q ss_pred hhcccccccccCCCCHH--HHHHHHHHHHhhCCCCCEEEEe
Q 044941 140 NMYNVKFQWVLTTWTDD--ECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~De--e~~~IL~~~~~AL~~gGrLlI~ 178 (202)
- + .+....+ ...++|+.++..|+|||.+++.
T Consensus 156 ~-~-------~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 156 S-T-------EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp C-S-------SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred C-C-------CCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 3 1 1111110 1257889999999999998775
No 166
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=90.43 E-value=0.2 Score=43.45 Aligned_cols=91 Identities=11% Similarity=0.075 Sum_probs=57.0
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---CccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..++++.. .+ |.......+....+. .++.++++++ +. +| ...|+++...|.
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~--~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~-- 141 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRL--NKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG-- 141 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHH--TTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB--
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHH--cCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch--
Confidence 4699998 99999998888632 11 222222333333332 2556788887 32 35 457998865421
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEE
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLI 176 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLl 176 (202)
+.++. ......+|++++..|+|||+++
T Consensus 142 ---~~l~~--~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 ---YFLLF--ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ---TTBTT--TCHHHHHHHHHHHHEEEEEEEE
T ss_pred ---hhccC--HHHHHHHHHHHHhhcCCCcEEE
Confidence 02322 2345678999999999999987
No 167
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=90.23 E-value=0.19 Score=44.77 Aligned_cols=92 Identities=8% Similarity=0.019 Sum_probs=59.1
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec----C-CCcceeeeehhcc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----P-NKSCTLLIKNMYN 143 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P-~~AD~ylLk~m~~ 143 (202)
...++|+| |.|.++..+++...++ |. +..+..+....+.. ++ .+++. +++ + ...|+++..-
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~--~~--~v~~~~~D~~~~~~~~~~fD~Ii~np--- 306 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEAN--AL--KAQALHSDVDEALTEEARFDIIVTNP--- 306 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHT--TC--CCEEEECSTTTTSCTTCCEEEEEECC---
T ss_pred CCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc--CC--CeEEEEcchhhccccCCCeEEEEECC---
Confidence 35799998 9999999999874332 21 12223333333221 22 25555 332 3 3578888764
Q ss_pred cccccccCC---CCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 144 VKFQWVLTT---WTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 144 ~P~k~VLHd---W~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.+|. -..+...++|++++..|+|||+++++-
T Consensus 307 -----p~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 307 -----PFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp -----CCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----chhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 3343 446788899999999999999998863
No 168
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=90.20 E-value=0.23 Score=44.90 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=61.2
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC------Cccc-cccccchhhhccCCCCCCceeee--ee------cC-CCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF------GTEH-DKAHCPLHLKTGACRFGQRCSRV--HF------YP-NKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l------dl~~-d~~~~~~~~k~gacr~~dRcs~v--hf------fP-~~AD~ylL 138 (202)
...++|++ |.|..+..+++..++- |... -...+....+.. ++ ..+++. ++ ++ ...|++++
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~--g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM--GI-KIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT--TC-CSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc--CC-CcEEEEEcChhhcchhhccCCCCEEEE
Confidence 35799997 9999999999988762 2211 122222222211 22 135554 32 23 34688885
Q ss_pred ------ehhcc-cccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccCCCC
Q 044941 139 ------KNMYN-VKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPDDS 186 (202)
Q Consensus 139 ------k~m~~-~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~~~~ 186 (202)
..++. +|. +.+.|+.++. .++|++++..|+|||+|++...-+....
T Consensus 337 D~Pcsg~g~~~~~pd--~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~e 396 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPE--LRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEE 396 (450)
T ss_dssp ECCCCCGGGTTTSTT--HHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGG
T ss_pred cCCCCCCeeeccChh--hhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhh
Confidence 22222 233 1112333333 6889999999999999998887655433
No 169
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=90.19 E-value=0.36 Score=36.68 Aligned_cols=91 Identities=7% Similarity=-0.019 Sum_probs=53.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCC--C---Cc-cccccccchhhhccCCCCCCceeee--ee---c---CCCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN--F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---Y---PNKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~--l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---f---P~~AD~ylLk~m 141 (202)
..++|+| |.|.++..+++. +. + |. +.....+....+.. ++.+++++. ++ . +...|++++...
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMT--KAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTT--TCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 4799998 999999999887 43 1 32 22233334333322 455677776 32 2 344788776542
Q ss_pred cccccccccCCCCHHHHHHHHHHHH--hhCCCCCEEEEeeec
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCY--KALPAGGKLIACEPV 181 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~--~AL~~gGrLlI~E~v 181 (202)
| | .....+.++.+. +.|+|||.+++...-
T Consensus 110 ~--------~---~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 110 Y--------A---KETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp S--------H---HHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred C--------C---cchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 1 1 133345555555 778999998776543
No 170
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=90.18 E-value=0.77 Score=38.25 Aligned_cols=108 Identities=13% Similarity=0.115 Sum_probs=59.4
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCCC----cccc---ccccchhhhccCCCCCCceeee--ee--c-------CCCccee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNFG----TEHD---KAHCPLHLKTGACRFGQRCSRV--HF--Y-------PNKSCTL 136 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ld----l~~d---~~~~~~~~k~gacr~~dRcs~v--hf--f-------P~~AD~y 136 (202)
...++|++ |.|..+..+++..++-+ .... ...+....+.. ++. ++++. +. + +...|++
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~--g~~-~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM--GVL-NTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT--TCC-SEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh--CCC-cEEEEeCChHhcchhhhhccccCCEE
Confidence 35799997 99999999999877632 1111 12222222211 222 55555 32 1 2346888
Q ss_pred eeehhcccccccccC---CCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccCCCCCc
Q 044941 137 LIKNMYNVKFQWVLT---TWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPDDSNE 188 (202)
Q Consensus 137 lLk~m~~~P~k~VLH---dW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~~~~~~ 188 (202)
++---+..-. +++ .|+.++. .++|++++..|+|||+|++...-+....++
T Consensus 161 l~d~Pcs~~g--~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene 220 (274)
T 3ajd_A 161 LLDAPCSGNI--IKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE 220 (274)
T ss_dssp EEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSH
T ss_pred EEcCCCCCCc--ccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhH
Confidence 7641000000 111 3666554 689999999999999998876544433333
No 171
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=90.14 E-value=0.11 Score=42.11 Aligned_cols=91 Identities=11% Similarity=0.030 Sum_probs=58.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-----Cc-cccccccchhhhccCCCCCCceeee--ee---c---C-----CCcce
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---Y---P-----NKSCT 135 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---f---P-----~~AD~ 135 (202)
..++|+| |.|..+..+++..|. . |. +.....+..+++.. ++.+++++. +. + | ...|+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 3689998 999999999998873 1 21 12223333333322 455677776 32 1 1 33576
Q ss_pred eeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 136 LLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 136 ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
+++-. +.++....|+.++..|+|||.|++.+.+.
T Consensus 152 V~~d~-------------~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 152 IFIDA-------------DKRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEECS-------------CGGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEECC-------------CHHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 66543 23556789999999999999998866554
No 172
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=90.07 E-value=0.52 Score=37.42 Aligned_cols=88 Identities=11% Similarity=0.010 Sum_probs=51.0
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC---CccccccccchhhhccCCCCCCceeee--eec--------CCCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY--------PNKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hff--------P~~AD~ylLk~m 141 (202)
..++|+| |.|.++..+++.. |.- ++......+....+.. ... .++++. ++. +...|++++..
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~-~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~- 151 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIV-EER-RNIVPILGDATKPEEYRALVPKVDVIFEDV- 151 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-SSC-TTEEEEECCTTCGGGGTTTCCCEEEEEECC-
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHH-hcc-CCCEEEEccCCCcchhhcccCCceEEEECC-
Confidence 4799998 9999999999885 431 2221111111111111 011 456655 221 23457776432
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
. ..+....+|++++..|+|||.+++.
T Consensus 152 --------~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 --------A---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp --------C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------C---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 1 2334455699999999999999887
No 173
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=89.75 E-value=0.3 Score=38.79 Aligned_cols=99 Identities=10% Similarity=0.023 Sum_probs=54.8
Q ss_pred CcceeecC-C-hHHHHHHHHHHC-CCC-Cc---cccccccchhhhccCCCCCCceeee--ee--c---C-CCcceeeeeh
Q 044941 76 SEAFADHQ-N-AQQALETVAQQV-PNF-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF--Y---P-NKSCTLLIKN 140 (202)
Q Consensus 76 ~~~~~d~~-g-~G~ll~~ll~~~-P~l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf--f---P-~~AD~ylLk~ 140 (202)
..+++|+| | .|.++..+++.. -++ ++ +.....+....+.. ++ +++++ +. + | ...|+++..-
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~--~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN--NS--NVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT--TC--CCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh--CC--CcEEEeCCchhhhhcccCceeEEEECC
Confidence 35799998 8 999999999885 222 22 22223333333221 22 56665 32 2 3 4478877543
Q ss_pred hccc-ccc--------cccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 141 MYNV-KFQ--------WVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 141 m~~~-P~k--------~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
-|.. +.. +..-.-..+...++|+.++..|+|||+++++
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 2210 000 0000011233478999999999999999875
No 174
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=89.72 E-value=0.063 Score=43.76 Aligned_cols=91 Identities=13% Similarity=0.152 Sum_probs=53.4
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Ccc---ccccccchhhhccCCCCCCceeee--e---e----cCC-Ccceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GTE---HDKAHCPLHLKTGACRFGQRCSRV--H---F----YPN-KSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl~---~d~~~~~~~~k~gacr~~dRcs~v--h---f----fP~-~AD~ylL 138 (202)
...++|+| |.|.++..+++++|+. ++. ..+..+....+.. ++. .++++ + + +|. ..|.+++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~--~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE--GLS-NLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT--TCS-SEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh--CCC-cEEEEECCHHHHHHHHcCCCChheEEE
Confidence 34699998 9999999999999983 322 2222333322211 232 35555 2 2 443 3466655
Q ss_pred ehhcccccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEe
Q 044941 139 KNMYNVKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~ 178 (202)
-. +. .|..... ..+|+.++..|+|||.+++.
T Consensus 112 ~~--~~-------p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 112 FF--PD-------PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp ES--CC-------CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eC--CC-------CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 41 11 1221111 25899999999999998764
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=89.71 E-value=0.16 Score=43.71 Aligned_cols=91 Identities=11% Similarity=0.029 Sum_probs=56.5
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---CccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..++++.. ++ |.......+....+. .++.++++++ ++ +| ...|+++...+..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~--~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~- 116 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVEL--NGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY- 116 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHH--TTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT-
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHH--cCCCCCEEEEECchhhccCCCCcccEEEEeCchh-
Confidence 4699998 99999988887632 11 222222233333332 2567788887 32 35 4579888764321
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEE
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLI 176 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLl 176 (202)
.++.. +....+|+.++..|+|||.++
T Consensus 117 ----~l~~~--~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 ----FLLYE--SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ----TBSTT--CCHHHHHHHHHHHEEEEEEEE
T ss_pred ----hcccH--HHHHHHHHHHHhhcCCCeEEE
Confidence 23322 334578899999999999986
No 176
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=89.69 E-value=0.13 Score=45.16 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=58.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--e---ec---C-CCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--H---FY---P-NKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--h---ff---P-~~AD~ylL 138 (202)
..++.|+| |.|.++..+++..|.. +. +.....|..+++...+++ ..|++++ + +. + ...|++++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 35799998 9999999999876652 22 333444555443211234 4578877 4 22 2 34788886
Q ss_pred ehhcccccccccCCCCHH---HHHHHHHHHHhhCCCCCEEEEe
Q 044941 139 KNMYNVKFQWVLTTWTDD---ECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~De---e~~~IL~~~~~AL~~gGrLlI~ 178 (202)
-. + +.+... ...++|+.++..|+|||.+++.
T Consensus 201 d~-~--------~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 201 DS-S--------DPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CC-C--------CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-C--------CccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 42 1 112111 1478999999999999999875
No 177
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=89.68 E-value=0.59 Score=40.31 Aligned_cols=95 Identities=11% Similarity=-0.032 Sum_probs=56.4
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC-----Cc-cccccccchhhhccCCCCCCceeee--eec----CCC-cceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY----PNK-SCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~-AD~ylLk~m 141 (202)
..++|.+ |+|.++.+++... |.. |. +.....+....+.. ++. ++++. ++. |.. .|+++.-
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--g~~-~i~~~~~D~~~~~~~~~~~D~Ii~n-- 279 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--GLS-WIRFLRADARHLPRFFPEVDRILAN-- 279 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--TCT-TCEEEECCGGGGGGTCCCCSEEEEC--
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEeCChhhCccccCCCCEEEEC--
Confidence 4699997 9999999999987 553 22 23334444444432 454 67776 432 232 3666552
Q ss_pred cccccc-cccCC--CCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQ-WVLTT--WTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k-~VLHd--W~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
|+. .-+.+ --.+...++++.++..|+|||+++++-
T Consensus 280 ---pPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 280 ---PPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp ---CCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ---CCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 220 00100 001223688899999999999998864
No 178
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=89.62 E-value=0.33 Score=41.37 Aligned_cols=84 Identities=10% Similarity=0.050 Sum_probs=53.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCC---C-Cc---cccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN---F-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~---l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m 141 (202)
..++|+| |.|.++..+++..+. + ++ +.....+....+.. ++. .+++. +. .| ...|+++...
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~~- 152 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--GIE-NVIFVCGDGYYGVPEFSPYDVIFVTV- 152 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT--TCC-SEEEEESCGGGCCGGGCCEEEEEECS-
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-CeEEEECChhhccccCCCeEEEEEcC-
Confidence 4799998 999999999998775 3 22 12223333333221 233 36665 32 22 3479999887
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.+|... +.+++.|+|||++++..
T Consensus 153 -------~~~~~~--------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 153 -------GVDEVP--------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp -------BBSCCC--------HHHHHHEEEEEEEEEEB
T ss_pred -------CHHHHH--------HHHHHhcCCCcEEEEEE
Confidence 445554 46777899999998874
No 179
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=89.53 E-value=0.89 Score=41.77 Aligned_cols=107 Identities=13% Similarity=0.242 Sum_probs=63.7
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC------Ccc-ccccccchhhhccCCCCCCceeee--ee------cCCCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF------GTE-HDKAHCPLHLKTGACRFGQRCSRV--HF------YPNKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l------dl~-~d~~~~~~~~k~gacr~~dRcs~v--hf------fP~~AD~ylLk 139 (202)
...++|++ |.|..+..+++..++- |.. .-...+...++. +++. .+++. +. ++...|.+++-
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r--~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D 194 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISR--CGIS-NVALTHFDGRVFGAAVPEMFDAILLD 194 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH--HTCC-SEEEECCCSTTHHHHSTTCEEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--cCCC-cEEEEeCCHHHhhhhccccCCEEEEC
Confidence 35799997 8999999999987642 221 111222222221 1222 35554 32 23457888871
Q ss_pred ------hhcc-cccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccCCCCC
Q 044941 140 ------NMYN-VKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPDDSN 187 (202)
Q Consensus 140 ------~m~~-~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~~~~~ 187 (202)
.++. +|. +...|+.++. .+||++++..|+|||+|++...-+....+
T Consensus 195 ~PcSg~G~~~~~pd--~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~En 254 (479)
T 2frx_A 195 APCSGEGVVRKDPD--ALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEEN 254 (479)
T ss_dssp CCCCCGGGGGTCTT--SSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTT
T ss_pred CCcCCcccccCCHH--HHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccC
Confidence 2222 333 4457887653 47899999999999999887654443333
No 180
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=89.43 E-value=0.27 Score=39.43 Aligned_cols=88 Identities=13% Similarity=0.127 Sum_probs=51.2
Q ss_pred CcceeecC-ChHHHHHHHHHHC-CCC---CccccccccchhhhccCCCCCCceeee--ee-----c---CCCcceeeeeh
Q 044941 76 SEAFADHQ-NAQQALETVAQQV-PNF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HF-----Y---PNKSCTLLIKN 140 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~-P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hf-----f---P~~AD~ylLk~ 140 (202)
...++|+| |.|.++..+++.+ |.. ++...........+.. +...++++. ++ + +...|+++...
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a--~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLA--KKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHH--HHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHh--hccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 35799998 9999999999986 542 2211110001111110 011345554 21 1 23357776532
Q ss_pred hcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEE
Q 044941 141 MYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI 177 (202)
. ..+....++++++..|+|||.+++
T Consensus 156 ---------~---~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 156 ---------A---QPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp ---------C---CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---------C---CccHHHHHHHHHHHHcCCCeEEEE
Confidence 1 345567788999999999999988
No 181
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=89.37 E-value=0.12 Score=44.60 Aligned_cols=96 Identities=9% Similarity=-0.096 Sum_probs=57.3
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--ee---c---CCCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HF---Y---PNKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hf---f---P~~AD~ylLk 139 (202)
..++.|+| |.|.++..+++..|.. ++ +.....|..++..-++++ ..|++++ +. . +...|++++-
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 35799997 9999999999876642 22 233444555443211233 5678776 32 2 3447888874
Q ss_pred hhcccccccccCCCC--HHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 140 NMYNVKFQWVLTTWT--DDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~--Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.. .+.-. .....++|++++..|+|||.+++..
T Consensus 176 ~~--------~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 176 SS--------DPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CC-------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--------CCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 31 11111 1234678999999999999987754
No 182
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=89.30 E-value=0.14 Score=44.02 Aligned_cols=95 Identities=11% Similarity=-0.046 Sum_probs=58.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCC-C-CCceeee--ee---c---CCCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACR-F-GQRCSRV--HF---Y---PNKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr-~-~dRcs~v--hf---f---P~~AD~ylL 138 (202)
..++.|+| |.|.++..+++..|.. ++ +.....|..++..-.++ + ..|++++ +. . +...|++++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 35799997 9999999999866552 22 23344455444320012 3 4577776 32 2 345799888
Q ss_pred ehhcccccccccCCC--CH-HH--HHHHHHHHHhhCCCCCEEEEe
Q 044941 139 KNMYNVKFQWVLTTW--TD-DE--CKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 139 k~m~~~P~k~VLHdW--~D-ee--~~~IL~~~~~AL~~gGrLlI~ 178 (202)
... .|.. .. +. ..+.|++++..|+|||.+++.
T Consensus 158 d~~--------~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 158 DLT--------DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp ECC--------CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred CCC--------CcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 641 2221 11 11 368899999999999999876
No 183
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=89.23 E-value=0.26 Score=44.11 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=60.1
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Ccccc---ccccchhhhccCCCCCCceeee--ee------cC-CCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GTEHD---KAHCPLHLKTGACRFGQRCSRV--HF------YP-NKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl~~d---~~~~~~~~k~gacr~~dRcs~v--hf------fP-~~AD~ylLk 139 (202)
...++|++ |.|..+..+++..|+. +.... ...+....+ +.+-.+++. ++ ++ ...|.+++-
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~----~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLK----RLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHH----HTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH----HcCCCeEEEeCchhhchhhcccCCCCEEEEe
Confidence 35799997 9999999999998862 11111 122222222 222234444 32 23 347888751
Q ss_pred ------hhcc-cccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 140 ------NMYN-VKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 140 ------~m~~-~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
.++. +|. +...|+.++. .++|++++..|+|||+|++...-+...
T Consensus 323 ~Pcsg~g~~~~~p~--~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ 380 (429)
T 1sqg_A 323 APCSATGVIRRHPD--IKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE 380 (429)
T ss_dssp CCCCCGGGTTTCTT--HHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG
T ss_pred CCCCcccccCCCcc--hhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh
Confidence 2221 222 1112444443 588999999999999999988655433
No 184
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.21 E-value=0.39 Score=39.63 Aligned_cols=90 Identities=10% Similarity=0.027 Sum_probs=56.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Cc---cccccccchhhhccCCCCCCceeee--ee---cC-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-~~AD~ylLk~m~~~P 145 (202)
.+++|+| |+|.++..+++..+++ ++ +.....+....+.. ++. +++. ++ +| ...|+++...
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~--~~~--v~~~~~d~~~~~~~~~fD~Vv~n~----- 192 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVR--PRFLEGSLEAALPFGPFDLLVANL----- 192 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCC--CEEEESCHHHHGGGCCEEEEEEEC-----
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHc--CCc--EEEEECChhhcCcCCCCCEEEECC-----
Confidence 5799998 9999999988876643 22 22223333333221 222 5554 22 43 4478877532
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
+ .+....++++++..|+|||++++......
T Consensus 193 ----~----~~~~~~~l~~~~~~LkpgG~lils~~~~~ 222 (254)
T 2nxc_A 193 ----Y----AELHAALAPRYREALVPGGRALLTGILKD 222 (254)
T ss_dssp ----C----HHHHHHHHHHHHHHEEEEEEEEEEEEEGG
T ss_pred ----c----HHHHHHHHHHHHHHcCCCCEEEEEeeccC
Confidence 1 13467899999999999999998776543
No 185
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=88.90 E-value=0.39 Score=37.65 Aligned_cols=84 Identities=12% Similarity=0.045 Sum_probs=52.3
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC---Cc---cccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF---GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l---dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m 141 (202)
.+++|+| |.|.++..+++.. |+. ++ +.....+...++.. ++ .++++. ++ +| ...|+++...
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~v~~~~~d~~~~~~~~~~fD~v~~~~- 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL--GY-DNVIVIVGDGTLGYEPLAPYDRIYTTA- 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--TC-TTEEEEESCGGGCCGGGCCEEEEEESS-
T ss_pred CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--CC-CCeEEEECCcccCCCCCCCeeEEEECC-
Confidence 4799998 9999999999987 432 21 12222333332211 22 235554 32 23 3479998887
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++|... ++++..|+|||++++.-
T Consensus 155 -------~~~~~~--------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 155 -------AGPKIP--------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp -------BBSSCC--------HHHHHTEEEEEEEEEEE
T ss_pred -------chHHHH--------HHHHHHcCCCcEEEEEE
Confidence 566665 36788899999998764
No 186
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=88.89 E-value=0.28 Score=40.76 Aligned_cols=88 Identities=5% Similarity=-0.088 Sum_probs=55.5
Q ss_pred CcceeecC-ChHHHHHHHHHH-CCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee---cC-CCcceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQ-VPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-NKSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~-~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-~~AD~ylLk~m 141 (202)
...++|+| |.|.++..+++. +|.. |. +.....+....+... + .+++++. ++ +| ...|++++ ++
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-g-~~~v~~~~~d~~~~~~~~~fD~Vi~-~~ 187 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY-D-IGNVRTSRSDIADFISDQMYDAVIA-DI 187 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS-C-CTTEEEECSCTTTCCCSCCEEEEEE-CC
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC-C-CCcEEEEECchhccCcCCCccEEEE-cC
Confidence 35799998 999999999998 6653 32 222333333332100 1 2467766 32 34 34688876 31
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
-+. .++|++++..|+|||++++...
T Consensus 188 --------~~~------~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 188 --------PDP------WNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp --------SCG------GGSHHHHHHTEEEEEEEEEEES
T ss_pred --------cCH------HHHHHHHHHHcCCCCEEEEEeC
Confidence 111 3789999999999999988774
No 187
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=88.63 E-value=0.36 Score=38.34 Aligned_cols=82 Identities=13% Similarity=0.083 Sum_probs=52.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccc---ccccccchhhhccCCCCCCceeee--ee---cC--CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF---YP--NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf---fP--~~AD~ylLk~m~~~ 144 (202)
.+++|+| |.|.++..+++...++ ++. .....+....+ ..+ ++++. ++ +| ...|++++..
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~----~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~---- 142 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLS----YYN-NIKLILGDGTLGYEEEKPYDRVVVWA---- 142 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHT----TCS-SEEEEESCGGGCCGGGCCEEEEEESS----
T ss_pred CEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHh----hcC-CeEEEECCcccccccCCCccEEEECC----
Confidence 4799998 9999999999876332 221 11222222222 122 56665 32 22 3479998887
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++|...+ .++..|+|||++++..
T Consensus 143 ----~~~~~~~--------~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 143 ----TAPTLLC--------KPYEQLKEGGIMILPI 165 (231)
T ss_dssp ----BBSSCCH--------HHHHTEEEEEEEEEEE
T ss_pred ----cHHHHHH--------HHHHHcCCCcEEEEEE
Confidence 6676654 4777899999998875
No 188
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=88.47 E-value=0.29 Score=40.15 Aligned_cols=89 Identities=12% Similarity=0.191 Sum_probs=55.0
Q ss_pred cceeecC-ChHHHHHHHHHH-CCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQ-VPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~-~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m 141 (202)
..++|+| |.|.++..+++. .|.. |. +.....+...++.....+.+++++. ++ ++ ...|++++ +
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~-~- 178 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL-D- 178 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE-E-
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE-C-
Confidence 4799997 999999999986 4542 32 2222333333221000123567766 32 33 34788877 3
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
..+.| ++|+++++.|+|||++++...
T Consensus 179 -------~~~~~------~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 179 -------MLAPW------EVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp -------SSCGG------GGHHHHHHHEEEEEEEEEEES
T ss_pred -------CcCHH------HHHHHHHHhCCCCCEEEEEeC
Confidence 22233 679999999999999988764
No 189
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=88.24 E-value=0.63 Score=39.02 Aligned_cols=92 Identities=12% Similarity=0.089 Sum_probs=50.0
Q ss_pred CCCCcceeecC-ChHHHHHHHHHHC-CCCCccccccccchhh---hccCCCCCCceeee--e-----ec---CCCcceee
Q 044941 73 PPQSEAFADHQ-NAQQALETVAQQV-PNFGTEHDKAHCPLHL---KTGACRFGQRCSRV--H-----FY---PNKSCTLL 137 (202)
Q Consensus 73 ~p~~~~~~d~~-g~G~ll~~ll~~~-P~ldl~~d~~~~~~~~---k~gacr~~dRcs~v--h-----ff---P~~AD~yl 137 (202)
.|+ .+++|+| |+|.++..+++.. |+ |.....+..+..+ +..+-..+ .+..+ + .+ ....|+++
T Consensus 76 kpG-~~VldlG~G~G~~~~~la~~VG~~-G~V~avD~s~~~~~~l~~~a~~~~-ni~~V~~d~~~p~~~~~~~~~vDvVf 152 (233)
T 4df3_A 76 KEG-DRILYLGIASGTTASHMSDIIGPR-GRIYGVEFAPRVMRDLLTVVRDRR-NIFPILGDARFPEKYRHLVEGVDGLY 152 (233)
T ss_dssp CTT-CEEEEETCTTSHHHHHHHHHHCTT-CEEEEEECCHHHHHHHHHHSTTCT-TEEEEESCTTCGGGGTTTCCCEEEEE
T ss_pred CCC-CEEEEecCcCCHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhhHhhc-CeeEEEEeccCccccccccceEEEEE
Confidence 344 5799998 9999999999975 54 2111111111111 00000111 23322 1 11 23356554
Q ss_pred eehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 138 IKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 138 Lk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.- +-|.| +....+++++..|+|||+++|..
T Consensus 153 ~d---------~~~~~---~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 153 AD---------VAQPE---QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EC---------CCCTT---HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Ee---------ccCCh---hHHHHHHHHHHhccCCCEEEEEE
Confidence 32 12332 45678999999999999998763
No 190
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=88.12 E-value=0.19 Score=40.78 Aligned_cols=86 Identities=9% Similarity=0.090 Sum_probs=55.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cccc---cccccchhhhccCCCCCCceeee--ee--cC------CCcceeeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTEH---DKAHCPLHLKTGACRFGQRCSRV--HF--YP------NKSCTLLIK 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~~---d~~~~~~~~k~gacr~~dRcs~v--hf--fP------~~AD~ylLk 139 (202)
..++|+| |+|.++..++...|.. ++.. ....+....+.. ++. .++++ ++ +| ...|+++..
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL--QLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--TCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--CCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 5799998 9999999999888874 2211 122233332211 232 36666 21 12 346888876
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
. + .+...+++.++..|+|||.+++.+
T Consensus 149 ~--------~------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 149 A--------V------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp C--------C------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred c--------c------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 4 1 225789999999999999998875
No 191
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=88.09 E-value=0.25 Score=41.01 Aligned_cols=88 Identities=10% Similarity=0.037 Sum_probs=56.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Ccccc---ccccchhhhccCCCCCCceeeee--e--cC------CCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GTEHD---KAHCPLHLKTGACRFGQRCSRVH--F--YP------NKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl~~d---~~~~~~~~k~gacr~~dRcs~vh--f--fP------~~AD~ylL 138 (202)
...++|+| |+|.++..++..+|+. ++... ...+....+. .++.+ +++++ . ++ ...|+++.
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEV--LGLKG-ARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--HTCSS-EEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--hCCCc-eEEEECcHHHhhcccccCCCceEEEE
Confidence 45799998 9999999999999884 22211 2222222221 13433 66662 1 22 34788887
Q ss_pred ehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 139 KNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
+.+ .+ ...+++.++..|+|||+++++..
T Consensus 158 ~a~---------~~-----~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 158 RAV---------AP-----LCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp ESS---------CC-----HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCc---------CC-----HHHHHHHHHHHcCCCeEEEEEeC
Confidence 651 22 35788999999999999998764
No 192
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=87.99 E-value=0.45 Score=43.81 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=61.4
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCCCcccc-------ccccchhhhccCCCCCCceeee--ee------cCCCcceeee-
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNFGTEHD-------KAHCPLHLKTGACRFGQRCSRV--HF------YPNKSCTLLI- 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ldl~~d-------~~~~~~~~k~gacr~~dRcs~v--hf------fP~~AD~ylL- 138 (202)
...++|++ |.|..+..+++..++-+.... ...+....+. .++. +.+. +. ++...|.+++
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r--~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER--WGAP--LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH--HCCC--CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--cCCe--EEEEECCHHHhhhhccccCCEEEEC
Confidence 45799997 999999999998876321111 1222222221 1232 5554 31 2455788885
Q ss_pred -----ehhcc-cccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 139 -----KNMYN-VKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 139 -----k~m~~-~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
..++. +|. +...|+.++. .+||+.++..|+|||+|+..-.-+.
T Consensus 178 ~PcSg~G~~rr~pd--~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 178 APCSGEGMFRKDRE--AARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp CCCCCGGGTTTCTT--SGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCcCCccccccChH--HhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 12222 333 2345666555 7899999999999999987654443
No 193
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=87.64 E-value=0.29 Score=37.32 Aligned_cols=43 Identities=23% Similarity=0.175 Sum_probs=34.1
Q ss_pred CCcceeeeehhcccccccccCCC-CHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 131 NKSCTLLIKNMYNVKFQWVLTTW-TDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 131 ~~AD~ylLk~m~~~P~k~VLHdW-~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
...|+++... ++|.. .| ..+.|++++..|+|||++++.+....
T Consensus 62 ~~fD~V~~~~--------~l~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~ 105 (176)
T 2ld4_A 62 SSFDIILSGL--------VPGSTTLH--SAEILAEIARILRPGGCLFLKEPVET 105 (176)
T ss_dssp SCEEEEEECC--------STTCCCCC--CHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCEeEEEECC--------hhhhcccC--HHHHHHHHHHHCCCCEEEEEEccccc
Confidence 3479998876 67776 44 37899999999999999999776554
No 194
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=87.41 E-value=1 Score=33.68 Aligned_cols=83 Identities=11% Similarity=0.047 Sum_probs=52.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc---cccccccchhhhccCCCCCCceeee--ee---cC-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP-~~AD~ylLk~m~~ 143 (202)
..++|+| |.|.++..+++ +.. ++ +.....+....+.. ++ +++++. ++ +| ...|++++..
T Consensus 37 ~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~d~~~~~~~~~~D~i~~~~--- 108 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF--NI-KNCQIIKGRAEDVLDKLEFNKAFIGG--- 108 (183)
T ss_dssp CEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT--TC-CSEEEEESCHHHHGGGCCCSEEEECS---
T ss_pred CEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc--CC-CcEEEEECCccccccCCCCcEEEECC---
Confidence 4799998 99999999988 432 22 22223333333221 22 456665 32 35 3578888776
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
+ +....+|++++.. +||++++...
T Consensus 109 -----~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 109 -----T------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp -----C------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred -----c------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 3 4456778888776 9999988773
No 195
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=87.26 E-value=0.055 Score=47.31 Aligned_cols=99 Identities=5% Similarity=-0.033 Sum_probs=67.3
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Ccc-ccccccchhhhccCCCCCCceeeeeec----CCCcceeeeehhccc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GTE-HDKAHCPLHLKTGACRFGQRCSRVHFY----PNKSCTLLIKNMYNV 144 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl~-~d~~~~~~~~k~gacr~~dRcs~vhff----P~~AD~ylLk~m~~~ 144 (202)
+..+.|+| |.|-|+..++..+|.. |.. .-++.+..++... +...++...++. |..+|+.|+.-
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~--g~~~~~~v~D~~~~~p~~~~DvaL~lk---- 206 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL--NVPHRTNVADLLEDRLDEPADVTLLLK---- 206 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT--TCCEEEEECCTTTSCCCSCCSEEEETT----
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc--CCCceEEEeeecccCCCCCcchHHHHH----
Confidence 35799998 9999999999988883 332 2223334444322 333344444553 56689997776
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee--ccCCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP--VLPDD 185 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~--vl~~~ 185 (202)
++|..++++-...+ +++++|.++|-+|.++. |....
T Consensus 207 ----ti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs 244 (281)
T 3lcv_B 207 ----TLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRS 244 (281)
T ss_dssp ----CHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC------
T ss_pred ----HHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCC
Confidence 67888888888888 89999999999999987 65543
No 196
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=86.69 E-value=0.22 Score=42.45 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=56.3
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCC-CCceeee--e---ec---CCCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRF-GQRCSRV--H---FY---PNKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~-~dRcs~v--h---ff---P~~AD~ylLk 139 (202)
..++.|+| |.|.++..+++..|.. |+ +.....|..++..-.+++ ..|++++ + +. +...|++++-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 35799997 9999999999876642 22 233344554443200133 4578777 3 22 2347888763
Q ss_pred hhcccccccccCCCCH-H---HHHHHHHHHHhhCCCCCEEEEe
Q 044941 140 NMYNVKFQWVLTTWTD-D---ECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~D-e---e~~~IL~~~~~AL~~gGrLlI~ 178 (202)
- . ..|.. . ...++|++++..|+|||.+++.
T Consensus 171 ~-~--------~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 171 S-T--------DPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp C-------------------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred C-C--------CcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 2 1 11110 0 2368899999999999998775
No 197
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=86.33 E-value=0.32 Score=40.56 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=33.9
Q ss_pred CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 131 NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 131 ~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
...|+++..+ ++|.+.|. .+.|++++..|+|||++++++.
T Consensus 134 ~~fD~V~~~~--------~l~~~~d~--~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 134 QKWDFIHMIQ--------MLYYVKDI--PATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp CCEEEEEEES--------CGGGCSCH--HHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEEee--------eeeecCCH--HHHHHHHHHHcCCCcEEEEEEe
Confidence 4479999998 78999875 4689999999999999998853
No 198
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=86.33 E-value=0.41 Score=38.44 Aligned_cols=88 Identities=11% Similarity=-0.019 Sum_probs=55.0
Q ss_pred cceeecC-ChHHHHHHHHHH-CCCC-----Cc-cccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQ-VPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~-~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m 141 (202)
..++|+| |.|.++..+++. .|.. |. +.....+...++... + .+++++. ++ +| ...|++++.-
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-g-~~~v~~~~~d~~~~~~~~~~~D~v~~~~- 174 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW-Q-VENVRFHLGKLEEAELEEAAYDGVALDL- 174 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-C-CCCEEEEESCGGGCCCCTTCEEEEEEES-
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc-C-CCCEEEEECchhhcCCCCCCcCEEEECC-
Confidence 4799997 999999999998 5552 22 222233333322100 1 3466666 32 44 3478887631
Q ss_pred cccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 142 YNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 142 ~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
. +..++|+++++.|+|||+++++...
T Consensus 175 ------------~--~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 175 ------------M--EPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp ------------S--CGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred ------------c--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 1 1237899999999999999988743
No 199
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=86.27 E-value=0.79 Score=36.49 Aligned_cols=87 Identities=15% Similarity=0.124 Sum_probs=53.6
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee---c-C-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---Y-P-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---f-P-~~AD~ylLk~m~~~ 144 (202)
..++|+| |.|.++..+++..-++ |. +.....+....+.. ++.+++++. ++ + + ...|++++.-
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKF--NLGKNVKFFNVDFKDAEVPEGIFHAAFVDV---- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHT--TCCTTEEEECSCTTTSCCCTTCBSEEEECS----
T ss_pred CEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc--CCCCcEEEEEcChhhcccCCCcccEEEECC----
Confidence 4799997 8999999999982121 22 22223333333221 344567766 32 2 3 3478777521
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
. +....|+++++.|++||++++...
T Consensus 167 ---------~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 167 ---------R--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ---------S--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ---------c--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1 224678899999999999988764
No 200
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=85.86 E-value=0.8 Score=35.56 Aligned_cols=87 Identities=7% Similarity=0.008 Sum_probs=45.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-CccccccccchhhhccCCCCCCceeee--ee--cCCCcceeeeehhcccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-GTEHDKAHCPLHLKTGACRFGQRCSRV--HF--YPNKSCTLLIKNMYNVKFQWV 149 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-dl~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP~~AD~ylLk~m~~~P~k~V 149 (202)
..++|+| |.|.++..+++.... + ++..+...+... +.. .. +++++ ++ +|...|++++.. .
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a-~~~---~~-~~~~~~~d~~~~~~~~D~v~~~~--------p 119 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETA-KRN---CG-GVNFMVADVSEISGKYDTWIMNP--------P 119 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHH-HHH---CT-TSEEEECCGGGCCCCEEEEEECC--------C
T ss_pred CEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHH-HHh---cC-CCEEEECcHHHCCCCeeEEEECC--------C
Confidence 4799998 999999999876211 1 221111111111 111 11 45555 33 365679888776 4
Q ss_pred cCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 150 LTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 150 LHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+|.+.+....++++.+.+.+ |.++++-
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~---g~~~~~~ 146 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS---MWIYSIG 146 (200)
T ss_dssp C-------CHHHHHHHHHHE---EEEEEEE
T ss_pred chhccCchhHHHHHHHHHhc---CcEEEEE
Confidence 56666655567888888887 4454443
No 201
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=85.81 E-value=1.3 Score=34.10 Aligned_cols=21 Identities=5% Similarity=0.017 Sum_probs=19.3
Q ss_pred cceeecC-ChHHHHHHHHHHCC
Q 044941 77 EAFADHQ-NAQQALETVAQQVP 97 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P 97 (202)
..++|+| |.|.++..+++.+|
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~ 45 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTK 45 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTT
T ss_pred CEEEEeCCCCCHHHHHHHHHcC
Confidence 5799998 99999999999988
No 202
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=85.67 E-value=0.031 Score=45.59 Aligned_cols=48 Identities=6% Similarity=-0.040 Sum_probs=30.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Cc-cccccccchhhhccCCCCCCceeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GT-EHDKAHCPLHLKTGACRFGQRCSRV 126 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl-~~d~~~~~~~~k~gacr~~dRcs~v 126 (202)
..++|++ |+|.++..+++++|.. |. +.....+....+. .++.+|++++
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~~~~v~~~ 121 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQ--NNLSDLIKVV 121 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH--TTCTTTEEEE
T ss_pred CEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH--cCCCccEEEE
Confidence 4799998 9999999999887753 22 2223334444332 2566677776
No 203
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=85.59 E-value=0.55 Score=37.13 Aligned_cols=92 Identities=4% Similarity=-0.042 Sum_probs=54.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCC-Cceeee--ee---cC----CC-cceeeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFG-QRCSRV--HF---YP----NK-SCTLLIK 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~-dRcs~v--hf---fP----~~-AD~ylLk 139 (202)
..++|++ |.|.++..++++... + |. +.....+....+.. ++. ++++++ ++ .+ .. .|++++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL--KCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--TCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh--CCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 4799997 999999988876543 2 32 12233333333321 332 577776 32 22 23 6888776
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHH--hhCCCCCEEEEeeec
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCY--KALPAGGKLIACEPV 181 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~--~AL~~gGrLlI~E~v 181 (202)
. .+| + ....+.|+.+. ..|+|||.+++...-
T Consensus 133 ~--------~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 133 P--------PFH-F--NLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp C--------CSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred C--------CCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4 223 2 34456777774 458999998776543
No 204
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=85.50 E-value=0.31 Score=38.27 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=33.6
Q ss_pred CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeecc
Q 044941 131 NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVL 182 (202)
Q Consensus 131 ~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl 182 (202)
...|+++... ++| | ++...+|++++..|+|||++++.+...
T Consensus 114 ~~fD~v~~~~--------~l~-~--~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 114 ESVDVAVFCL--------SLM-G--TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp TCEEEEEEES--------CCC-S--SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CCEeEEEEeh--------hcc-c--cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 3479999887 677 4 456789999999999999999998654
No 205
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=85.49 E-value=0.49 Score=36.35 Aligned_cols=22 Identities=14% Similarity=-0.008 Sum_probs=19.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCC
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN 98 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ 98 (202)
.+++|+| |.|.++..+++.++.
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~ 46 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNA 46 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhcc
Confidence 5799998 999999999999763
No 206
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=85.03 E-value=0.59 Score=35.39 Aligned_cols=93 Identities=5% Similarity=-0.162 Sum_probs=52.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-Cc---cccccccchhhhccCCCCCCceeee--ee---c------CCCcceeeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HF---Y------PNKSCTLLIK 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hf---f------P~~AD~ylLk 139 (202)
..++|++ |.|.++..+++.... + ++ +.....+....+.. ++.++++++ ++ . +...|++++.
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT--KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh--CCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 4799997 999999988874211 1 22 22223333333221 344577776 32 1 2446888776
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
..| |....+...+.+. .+..|+|||.+++...
T Consensus 124 ~~~--------~~~~~~~~~~~l~-~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 124 PPY--------AKQEIVSQLEKML-ERQLLTNEAVIVCETD 155 (187)
T ss_dssp CCG--------GGCCHHHHHHHHH-HTTCEEEEEEEEEEEE
T ss_pred CCC--------CchhHHHHHHHHH-HhcccCCCCEEEEEeC
Confidence 522 3333444444443 2666889999877543
No 207
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=84.72 E-value=0.5 Score=37.44 Aligned_cols=85 Identities=14% Similarity=0.032 Sum_probs=51.9
Q ss_pred cceeecC-ChHHHHHHHHHHCC-----C--C-Ccc---ccccccchhhhccCCCC----CCceeee--ee--------c-
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-----N--F-GTE---HDKAHCPLHLKTGACRF----GQRCSRV--HF--------Y- 129 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-----~--l-dl~---~d~~~~~~~~k~gacr~----~dRcs~v--hf--------f- 129 (202)
..++|+| |.|.++..+++... . + ++. .....+...++.. ++ .+++++. +. +
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD--KPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH--CGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc--CccccccCCEEEEECChHhcccccCcc
Confidence 5799998 89999999999874 3 2 221 2222333332211 21 2456665 32 1
Q ss_pred CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 130 PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 130 P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
....|++++.. .+|. ++++++..|++||++++.-
T Consensus 160 ~~~fD~I~~~~--------~~~~--------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGA--------SASE--------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECS--------BBSS--------CCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECC--------chHH--------HHHHHHHhcCCCcEEEEEE
Confidence 13478888776 4453 4577888999999987763
No 208
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=83.76 E-value=0.81 Score=37.15 Aligned_cols=86 Identities=12% Similarity=0.111 Sum_probs=50.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCCCccccccccchhhhccCCCCCCceeee--ee----cC-CCcceeeeehhccccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNFGTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP-NKSCTLLIKNMYNVKFQW 148 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ldl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP-~~AD~ylLk~m~~~P~k~ 148 (202)
..++|+| |.|.++..+++..|... .......+..+... .....++.+. ++ ++ ...|+++...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~-v~~vD~s~~~~~~a-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-------- 156 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEIT-TFGLDVSKVAIKAA-AKRYPQVTFCVASSHRLPFSDTSMDAIIRIY-------- 156 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSE-EEEEESCHHHHHHH-HHHCTTSEEEECCTTSCSBCTTCEEEEEEES--------
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCe-EEEEeCCHHHHHHH-HHhCCCcEEEEcchhhCCCCCCceeEEEEeC--------
Confidence 5799998 88999999999876531 00011111111110 0111234444 22 23 3468887644
Q ss_pred ccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 149 VLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 149 VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
+. ..|++++..|+|||++++...-
T Consensus 157 ~~---------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 157 AP---------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp CC---------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred Ch---------hhHHHHHHhcCCCcEEEEEEcC
Confidence 21 2478899999999999888643
No 209
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=83.63 E-value=0.35 Score=35.09 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=32.1
Q ss_pred cceeeeehhccccccccc------CCCCHHHHHHHH----HHHHhhC-CCCCEEEEeeeccC
Q 044941 133 SCTLLIKNMYNVKFQWVL------TTWTDDECKLIM----ENCYKAL-PAGGKLIACEPVLP 183 (202)
Q Consensus 133 AD~ylLk~m~~~P~k~VL------HdW~Dee~~~IL----~~~~~AL-~~gGrLlI~E~vl~ 183 (202)
|.|++|+|||++|..... .+.++++..+++ +.+++.+ .+.|.|.-+..+.+
T Consensus 1 s~~~~l~nm~~~p~~~~~~~~~l~~~~~~~~l~~~f~~~~edl~~~f~~~~G~V~~v~i~~~ 62 (104)
T 1jmt_A 1 SQTIALLNIYRNPQNSSQSADGLRSAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN 62 (104)
T ss_dssp CCEEEEEEEEECCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS
T ss_pred CcEEEEeeccCCccccccccCCcccccCHHHHHHHHHHHHHHHHHHhhccCCceEEEEEEeC
Confidence 578999999998882111 123566666666 4555555 67899876665443
No 210
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=81.67 E-value=3.8 Score=35.48 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=50.8
Q ss_pred cceeecC-ChHHHHHHHHHHC-CCC---CccccccccchhhhccCCCCCCceeee--eec---C-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQV-PNF---GTEHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~-P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~~AD~ylLk~m~~~P 145 (202)
.+++|.+ |+|.++..+++++ +.. +..-+...+ ..+.++++. +++ + ...|+++. ||
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~---------~~a~~~~~~~~D~~~~~~~~~fD~Ii~-----NP 106 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL---------DLPPWAEGILADFLLWEPGEAFDLILG-----NP 106 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC---------CCCTTEEEEESCGGGCCCSSCEEEEEE-----CC
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH---------HhCCCCcEEeCChhhcCccCCCCEEEE-----Cc
Confidence 4799998 9999999999876 331 222221111 112456655 443 3 34677654 24
Q ss_pred cccccCC-------CCHHHH-----------------HHHHHHHHhhCCCCCEEEEee
Q 044941 146 FQWVLTT-------WTDDEC-----------------KLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 146 ~k~VLHd-------W~Dee~-----------------~~IL~~~~~AL~~gGrLlI~E 179 (202)
+....+. .+++.. ..+++.+...|.+||++.++-
T Consensus 107 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 107 PYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp CCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 4111111 223322 256888999999999975543
No 211
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=81.47 E-value=0.053 Score=43.66 Aligned_cols=65 Identities=8% Similarity=0.006 Sum_probs=39.1
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec---C-CCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P-NKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P-~~AD~ylLk~m~~ 143 (202)
..++|++ |.|.++..+++..-++ |. +.....+....+.. ++.++++++ ++. + ...|++++...|.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVY--GIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc--CCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 5799998 9999999999875222 21 12223333333221 344578777 432 3 4589998876555
No 212
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=81.39 E-value=2.3 Score=34.82 Aligned_cols=20 Identities=30% Similarity=0.497 Sum_probs=18.3
Q ss_pred HHHHHHHHhhCCCCCEEEEe
Q 044941 159 KLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 159 ~~IL~~~~~AL~~gGrLlI~ 178 (202)
.++|+.++..|+|||+++++
T Consensus 117 ~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 117 DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp GGTHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEE
Confidence 67999999999999999885
No 213
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=80.62 E-value=3.2 Score=35.79 Aligned_cols=83 Identities=14% Similarity=0.150 Sum_probs=48.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC----CCccccccccchhhhccCCCCCCceee--------e--eecCCC-cceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN----FGTEHDKAHCPLHLKTGACRFGQRCSR--------V--HFYPNK-SCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~----ldl~~d~~~~~~~~k~gacr~~dRcs~--------v--hffP~~-AD~ylLk 139 (202)
...++|+| |+|.++..+++.... +|..... .....+. ..|+.. . .-+|.. .|.++.-
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~m--L~~a~r~-----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQ--LVWKLRQ-----DDRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSC--SCHHHHT-----CTTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHH--HHHHHHh-----CcccceecccCceecchhhCCCCCCCEEEEE
Confidence 34799998 999999888876322 1322211 1110110 112211 1 113433 5777664
Q ss_pred hhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 140 NMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 140 ~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
- .+|+. ..+|..++..|+|||+++++
T Consensus 159 ~--------sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 159 V--------SFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp C--------SSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred e--------eHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 4 34533 78999999999999999886
No 214
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=79.91 E-value=3 Score=34.90 Aligned_cols=86 Identities=7% Similarity=-0.062 Sum_probs=52.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCC-CCceeee--ee--cCCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HF--YPNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hf--fP~~AD~ylLk~m~~~P 145 (202)
.++.|+| |.|.++.++++. +. + ++ +.....|..++..-.+.+ ..|++++ +. ++...|++++-.
T Consensus 74 ~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~----- 147 (262)
T 2cmg_A 74 KEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQ----- 147 (262)
T ss_dssp CEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESS-----
T ss_pred CEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECC-----
Confidence 5799997 889999999987 62 1 22 233344544442210122 3477776 32 233467776542
Q ss_pred cccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 146 FQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 146 ~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
+|.. ..|+.++..|+|||.+++.
T Consensus 148 --------~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 148 --------EPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp --------CCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred --------CChH--HHHHHHHHhcCCCcEEEEE
Confidence 1221 2899999999999998875
No 215
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=79.64 E-value=1.8 Score=34.05 Aligned_cols=91 Identities=7% Similarity=-0.082 Sum_probs=52.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee---cC---CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP---NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP---~~AD~ylLk~m~ 142 (202)
..++|++ |.|.++..++++... + |. +.....+....+.. ++ ++++++ +. .| ...|++++...
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~--~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL--KA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--TC-CSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc--CC-CcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 4799997 999999988877543 2 22 22233333333321 23 467776 32 23 34688876542
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhh--CCCCCEEEEeeec
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKA--LPAGGKLIACEPV 181 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~A--L~~gGrLlI~E~v 181 (202)
.| + .....+++.+.+. |+|||.+++...-
T Consensus 132 -------~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 -------FR-R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp -------SS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred -------CC-C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 23 2 2234556666554 8999998765543
No 216
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=78.48 E-value=1.6 Score=40.07 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=59.5
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC------Cccc-cccccchhhhccCCCCCCceeee--ee------cCCCcceeeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF------GTEH-DKAHCPLHLKTGACRFGQRCSRV--HF------YPNKSCTLLIK 139 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l------dl~~-d~~~~~~~~k~gacr~~dRcs~v--hf------fP~~AD~ylLk 139 (202)
...++|++ |.|..+..+++..++- |... -...+....+. +++. .+.+. +. ++...|.+++-
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r--~g~~-nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER--WGVS-NAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH--HTCS-SEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH--cCCC-ceEEEeCCHHHhhhhccccCCEEEEC
Confidence 45799997 8999999999876652 2211 11222233221 1332 35554 21 24557888762
Q ss_pred ------hhcc-cccccccCCCCHHHH-------HHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 140 ------NMYN-VKFQWVLTTWTDDEC-------KLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 140 ------~m~~-~P~k~VLHdW~Dee~-------~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
.++. +|. +...|+.++. .+||++++..|+|||+|+..-.-+..
T Consensus 183 aPCSg~G~~rr~p~--~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 183 APCSGEGMFRKDPN--AIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CCCCCGGGTTTCHH--HHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred CCCCCccccccCHH--HhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 1222 232 1223544333 38899999999999999876654443
No 217
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=77.62 E-value=5.1 Score=30.84 Aligned_cols=81 Identities=5% Similarity=-0.039 Sum_probs=47.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C-Ccc---ccccccchhhhccCCCCCCceeee--ee--cCCCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F-GTE---HDKAHCPLHLKTGACRFGQRCSRV--HF--YPNKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l-dl~---~d~~~~~~~~k~gacr~~dRcs~v--hf--fP~~AD~ylLk~m~~~P~ 146 (202)
..++|+| |.|.++..+++..+. + ++. .....+....+.. ++ +++++ ++ +|...|++++.-
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~--~~~~~~~d~~~~~~~~D~v~~~~------ 120 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KG--KFKVFIGDVSEFNSRVDIVIMNP------ 120 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TT--SEEEEESCGGGCCCCCSEEEECC------
T ss_pred CEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc--CC--CEEEEECchHHcCCCCCEEEEcC------
Confidence 4799998 999999999887443 2 222 1222233222211 22 56666 33 365678887654
Q ss_pred ccccCCCCHHHHHHHHHHHHhhC
Q 044941 147 QWVLTTWTDDECKLIMENCYKAL 169 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~~~~~AL 169 (202)
..|.+......++|+.+.+.+
T Consensus 121 --p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 121 --PFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp --CCSSSSTTTTHHHHHHHHHHC
T ss_pred --CCccccCCchHHHHHHHHHhc
Confidence 335555444566778877776
No 218
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=76.64 E-value=0.53 Score=38.95 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=32.5
Q ss_pred cceeeeehhcccccccccCCCC--HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 133 SCTLLIKNMYNVKFQWVLTTWT--DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 133 AD~ylLk~m~~~P~k~VLHdW~--Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
.|+++... ++|... -++..+.|++++..|+|||++++.+.+
T Consensus 175 fD~V~~~~--------~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 175 ADALVSAF--------CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp EEEEEEES--------CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCEEEehh--------hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 79998887 555433 347789999999999999999998644
No 219
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=76.06 E-value=6 Score=33.82 Aligned_cols=89 Identities=8% Similarity=-0.036 Sum_probs=48.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-----cccccccchhhhccCCCC-CCceeee---eec--C-CCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-----EHDKAHCPLHLKTGACRF-GQRCSRV---HFY--P-NKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-----~~d~~~~~~~~k~gacr~-~dRcs~v---hff--P-~~AD~ylLk~ 140 (202)
..++|+| |.|.++..++++ ..+ |. +..+... ... +. .++++++ +++ | ...|+++.-.
T Consensus 84 ~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~----~~~--~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPI----PMS--TYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCC----CCC--STTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHH----Hhh--hcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 5799998 999999988886 222 22 1001100 011 11 1355555 332 3 4468876643
Q ss_pred hcccccccccCCCCHHH-HHHHHHHHHhhCCCCCEEEE
Q 044941 141 MYNVKFQWVLTTWTDDE-CKLIMENCYKALPAGGKLIA 177 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee-~~~IL~~~~~AL~~gGrLlI 177 (202)
.+. ..|...|+. ...+|+.++..|+|||.+++
T Consensus 157 ~~~-----~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 157 GES-----SPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CCC-----CSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ccc-----cCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 210 112112222 33689999999999997665
No 220
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=75.62 E-value=0.55 Score=37.66 Aligned_cols=43 Identities=19% Similarity=0.163 Sum_probs=33.4
Q ss_pred CCcceeeeehhcccccccccCCC--CHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 131 NKSCTLLIKNMYNVKFQWVLTTW--TDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 131 ~~AD~ylLk~m~~~P~k~VLHdW--~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
...|+++... ++|.. ..++..++|++++..|+|||.+++.+.+
T Consensus 156 ~~fD~v~~~~--------~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 156 PPADCLLSTL--------CLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp CCEEEEEEES--------CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCccEEEEhh--------hhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 3479998887 55521 2457789999999999999999998844
No 221
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=74.65 E-value=5.9 Score=34.25 Aligned_cols=98 Identities=9% Similarity=0.029 Sum_probs=57.7
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCC-ceeee--eec---C------CCcceeeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQ-RCSRV--HFY---P------NKSCTLLIK 139 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~d-Rcs~v--hff---P------~~AD~ylLk 139 (202)
..++|++ |.|.++..+++....+ |. +..+..+....+.. ++.+ +++++ +.+ + ...|++++-
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~--gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLA--GLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH--TCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 4799997 9999999999865432 22 22233333333322 4444 47776 422 2 347888772
Q ss_pred hhcccccccccC----CCC-HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 140 NMYNVKFQWVLT----TWT-DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 140 ~m~~~P~k~VLH----dW~-Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
|+.+... -|. .+...++|+.+++.|+|||.+++....
T Consensus 233 -----PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 233 -----PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp -----CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred -----CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 1111111 111 345678999999999999996655433
No 222
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=74.52 E-value=1.2 Score=36.64 Aligned_cols=42 Identities=17% Similarity=0.181 Sum_probs=33.5
Q ss_pred CcceeeeehhcccccccccCC--CCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 132 KSCTLLIKNMYNVKFQWVLTT--WTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 132 ~AD~ylLk~m~~~P~k~VLHd--W~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
..|+++... +||. -+.++..+.|++++..|+|||++++.+.+
T Consensus 156 ~fD~V~~~~--------~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 156 LADCVLTLL--------AMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CEEEEEEES--------CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCCEeeehH--------HHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 479998887 5553 23467789999999999999999998754
No 223
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=74.40 E-value=1.6 Score=37.16 Aligned_cols=89 Identities=7% Similarity=0.035 Sum_probs=51.8
Q ss_pred cceeecC-ChHHHHHHHHHH-CCCC-----Cc-cccccccchhhhc-------c-CCCCCCceeee--ee------cCC-
Q 044941 77 EAFADHQ-NAQQALETVAQQ-VPNF-----GT-EHDKAHCPLHLKT-------G-ACRFGQRCSRV--HF------YPN- 131 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~-~P~l-----dl-~~d~~~~~~~~k~-------g-acr~~dRcs~v--hf------fP~- 131 (202)
..++|+| |+|.++..+++. .|+. |. +.....+...++. . .-...+++++. ++ ++.
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 4799998 999999999998 4642 22 2222333333221 0 00123567666 32 132
Q ss_pred CcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 132 KSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 132 ~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
..|++++.. ...|. +|+.++..|+|||++++...
T Consensus 187 ~fD~V~~~~---------~~~~~------~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 187 TFDAVALDM---------LNPHV------TLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -EEEEEECS---------SSTTT------THHHHGGGEEEEEEEEEEES
T ss_pred CeeEEEECC---------CCHHH------HHHHHHHhcCCCcEEEEEeC
Confidence 368877632 23333 78889999999999987654
No 224
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=73.44 E-value=1.8 Score=34.04 Aligned_cols=86 Identities=13% Similarity=0.045 Sum_probs=50.9
Q ss_pred CcceeecC-ChHHHHHHHHHHC-CCC-----Cc-cccccccchhhhccCCCC----CCceeee--ee---c--CCCccee
Q 044941 76 SEAFADHQ-NAQQALETVAQQV-PNF-----GT-EHDKAHCPLHLKTGACRF----GQRCSRV--HF---Y--PNKSCTL 136 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~-P~l-----dl-~~d~~~~~~~~k~gacr~----~dRcs~v--hf---f--P~~AD~y 136 (202)
..+++|+| |.|.++..+++.. |.. |. +.....+....+.. ++ .+++++. +. + ....|++
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD--DPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--CTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh--cccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 35799998 9999999999875 432 21 12222233222210 11 2356665 32 1 2347888
Q ss_pred eeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 137 LIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 137 lLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
++.. .++. +++++++.|+|||++++..
T Consensus 156 ~~~~--------~~~~--------~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 156 HVGA--------AAPV--------VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EECS--------BBSS--------CCHHHHHTEEEEEEEEEEE
T ss_pred EECC--------chHH--------HHHHHHHhcCCCcEEEEEE
Confidence 7776 3443 3467888999999998854
No 225
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=72.61 E-value=1.5 Score=36.55 Aligned_cols=92 Identities=10% Similarity=0.059 Sum_probs=57.9
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC--C---Cc-cccccccchhhhccCCCCCCceeee--ee--cC--CCcceeeeehhc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN--F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--YP--NKSCTLLIKNMY 142 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~--l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--fP--~~AD~ylLk~m~ 142 (202)
...++|++ |.|.++..+++..+. + |. +.....+....+.. ++. .+.+. +. +| ...|++++..
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n--~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~-- 194 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN--KLN-NVIPILADNRDVELKDVADRVIMGY-- 194 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT--TCS-SEEEEESCGGGCCCTTCEEEEEECC--
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--CCC-CEEEEECChHHcCccCCceEEEECC--
Confidence 35799997 999999999999873 2 22 22233333333321 232 34444 32 23 2468877653
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
.. ...++++.+...|+|||.|++......+
T Consensus 195 ------p~------~~~~~l~~~~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 195 ------VH------KTHKFLDKTFEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp ------CS------SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred ------cc------cHHHHHHHHHHHcCCCCEEEEEEcCccc
Confidence 11 4556888999999999999888876544
No 226
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=71.69 E-value=1.6 Score=34.73 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=50.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCC--------CC-Ccc---ccccccchhhhccCCCC----CCceeee--ee---cC--C
Q 044941 76 SEAFADHQ-NAQQALETVAQQVP--------NF-GTE---HDKAHCPLHLKTGACRF----GQRCSRV--HF---YP--N 131 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P--------~l-dl~---~d~~~~~~~~k~gacr~----~dRcs~v--hf---fP--~ 131 (202)
..+++|+| |.|.++..+++..+ ++ ++. .....+...++.. +. ..++++. +. +| .
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~~~~ 162 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD--DRSMLDSGQLLIVEGDGRKGYPPNA 162 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH--HHHHHHHTSEEEEESCGGGCCGGGC
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc--CccccCCCceEEEECCcccCCCcCC
Confidence 35799998 88999999988654 22 111 1122222222110 10 2355555 32 33 3
Q ss_pred CcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 132 KSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 132 ~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
..|+++... .+|... +++++.|+|||++++.
T Consensus 163 ~fD~I~~~~--------~~~~~~--------~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 163 PYNAIHVGA--------AAPDTP--------TELINQLASGGRLIVP 193 (227)
T ss_dssp SEEEEEECS--------CBSSCC--------HHHHHTEEEEEEEEEE
T ss_pred CccEEEECC--------chHHHH--------HHHHHHhcCCCEEEEE
Confidence 479888776 445433 6778889999998775
No 227
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=69.81 E-value=4.8 Score=35.17 Aligned_cols=99 Identities=10% Similarity=0.018 Sum_probs=58.3
Q ss_pred CcceeecC-ChHHHHHHHHHHCC-CC---Cc-cccccccchhhhccCCCCCCceeee--eec---C------CCcceeee
Q 044941 76 SEAFADHQ-NAQQALETVAQQVP-NF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY---P------NKSCTLLI 138 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P-~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff---P------~~AD~ylL 138 (202)
...++|++ |.|.++..+++... ++ |. +.....+....+.. ++.+++++. +.+ + ...|++++
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n--~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLN--GVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 35799997 99999999998621 21 21 22233334333322 444477776 321 2 24688876
Q ss_pred ehhcccccccccCCCC----HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 139 KNMYNVKFQWVLTTWT----DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 139 k~m~~~P~k~VLHdW~----Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
- |+.+....-. .+...++++.+...|+|||.|+++.+-
T Consensus 296 d-----pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 D-----PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp C-----CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred C-----CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3 2211111000 155678899999999999998887653
No 228
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=68.94 E-value=2.7 Score=37.48 Aligned_cols=90 Identities=14% Similarity=0.069 Sum_probs=52.8
Q ss_pred ceeecC-ChHHHHHHHHHHCCC--CCcc--ccccccchhhhccCCCCCCceeeee--e----cCCCcceeeeehhccccc
Q 044941 78 AFADHQ-NAQQALETVAQQVPN--FGTE--HDKAHCPLHLKTGACRFGQRCSRVH--F----YPNKSCTLLIKNMYNVKF 146 (202)
Q Consensus 78 ~~~d~~-g~G~ll~~ll~~~P~--ldl~--~d~~~~~~~~k~gacr~~dRcs~vh--f----fP~~AD~ylLk~m~~~P~ 146 (202)
.+.|+| |.|.++...+++-.. ++.+ .....+....+.. ++.+++++++ . +|..+|+++---|-
T Consensus 86 ~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n--~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~---- 159 (376)
T 4hc4_A 86 TVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFN--GLEDRVHVLPGPVETVELPEQVDAIVSEWMG---- 159 (376)
T ss_dssp EEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHT--TCTTTEEEEESCTTTCCCSSCEEEEECCCCB----
T ss_pred EEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHc--CCCceEEEEeeeeeeecCCccccEEEeeccc----
Confidence 589998 999888777776443 2222 1222333333433 6889999983 2 48779988642110
Q ss_pred ccccCCCCHHHHHHHHHHHHhhCCCCCEEE
Q 044941 147 QWVLTTWTDDECKLIMENCYKALPAGGKLI 176 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~~~~~AL~~gGrLl 176 (202)
...+++- ....++.....-|+|||.++
T Consensus 160 ~~l~~e~---~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 160 YGLLHES---MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TTBTTTC---SHHHHHHHHHHHEEEEEEEE
T ss_pred ccccccc---hhhhHHHHHHhhCCCCceEC
Confidence 0012332 24455666667788999863
No 229
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=66.91 E-value=8.6 Score=33.46 Aligned_cols=94 Identities=7% Similarity=-0.034 Sum_probs=53.7
Q ss_pred CcceeecC-ChHHHHHHHHHHCC--CC-Cc---cccccccchhhhccCCCCCCceeee--eec----C-CCcceeeeehh
Q 044941 76 SEAFADHQ-NAQQALETVAQQVP--NF-GT---EHDKAHCPLHLKTGACRFGQRCSRV--HFY----P-NKSCTLLIKNM 141 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P--~l-dl---~~d~~~~~~~~k~gacr~~dRcs~v--hff----P-~~AD~ylLk~m 141 (202)
...++|.+ |+|.++.+++...+ ++ +. +.....|....+.. ++.+++++. ++. | ...|+++.-
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl~~~i~~~~~D~~~~~~~~~~fD~Ii~n-- 293 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GVLDKIKFIQGDATQLSQYVDSVDFAISN-- 293 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TCGGGCEEEECCGGGGGGTCSCEEEEEEE--
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CCCCceEEEECChhhCCcccCCcCEEEEC--
Confidence 35699998 99999999999887 43 22 23334455444432 566678877 432 3 346777653
Q ss_pred cccccc-ccc--CCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 142 YNVKFQ-WVL--TTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 142 ~~~P~k-~VL--HdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
|+. .-+ ...-.+-..++++.+...+ +|+++++
T Consensus 294 ---pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i 328 (373)
T 3tm4_A 294 ---LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFI 328 (373)
T ss_dssp ---CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEE
T ss_pred ---CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEE
Confidence 220 001 1111222366777777777 6666555
No 230
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=66.00 E-value=2.1 Score=36.77 Aligned_cols=92 Identities=7% Similarity=-0.092 Sum_probs=57.5
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-----Ccc-ccccccchhhhccCCCCCCceeee--eec----CCCcceeeeehhcc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-----GTE-HDKAHCPLHLKTGACRFGQRCSRV--HFY----PNKSCTLLIKNMYN 143 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-----dl~-~d~~~~~~~~k~gacr~~dRcs~v--hff----P~~AD~ylLk~m~~ 143 (202)
.++.|+| |.|-|+..+. |.. |+. .....+..++. +.+...++. ++. |..+|++++--
T Consensus 107 ~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~----~~g~~~~~~v~D~~~~~~~~~~DvvLllk--- 176 (253)
T 3frh_A 107 RRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAR----EKDWDFTFALQDVLCAPPAEAGDLALIFK--- 176 (253)
T ss_dssp SEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHH----HTTCEEEEEECCTTTSCCCCBCSEEEEES---
T ss_pred CeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHH----hcCCCceEEEeecccCCCCCCcchHHHHH---
Confidence 5899998 7887777766 552 322 22233333332 233445554 443 56789997775
Q ss_pred cccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEee--eccCC
Q 044941 144 VKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACE--PVLPD 184 (202)
Q Consensus 144 ~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E--~vl~~ 184 (202)
++|...+++-...+ ++.++|.++|-+|.++ .+...
T Consensus 177 -----~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr 213 (253)
T 3frh_A 177 -----LLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGR 213 (253)
T ss_dssp -----CHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC-----
T ss_pred -----HHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCC
Confidence 56777777777666 8888999998888888 55544
No 231
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=64.69 E-value=3.7 Score=35.32 Aligned_cols=91 Identities=7% Similarity=0.090 Sum_probs=55.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--eec--CCCcceeeeehhccccc
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HFY--PNKSCTLLIKNMYNVKF 146 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hff--P~~AD~ylLk~m~~~P~ 146 (202)
...++|++ |.|.++.. ++..-++ |. +.....+....+.. ++.+++++. +.+ +...|++++- |+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n--~l~~~v~~~~~D~~~~~~~fD~Vi~d-----pP 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLN--KLEHKIIPILSDVREVDVKGNRVIMN-----LP 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCCCCEEEEEEC-----CT
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECChHHhcCCCcEEEEC-----Cc
Confidence 35799996 99999988 7621111 22 22223333333322 455678777 432 4457888763 22
Q ss_pred ccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 147 QWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
.. ..++++.+...|.+||.|++++..-.
T Consensus 268 ~~---------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 268 KF---------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp TT---------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred Hh---------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 11 12788899999999999998887654
No 232
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=64.57 E-value=1.3 Score=37.36 Aligned_cols=29 Identities=28% Similarity=0.680 Sum_probs=23.5
Q ss_pred ccchhhhccCCCCCCceeeeeecCCCccee
Q 044941 107 HCPLHLKTGACRFGQRCSRVHFYPNKSCTL 136 (202)
Q Consensus 107 ~~~~~~k~gacr~~dRcs~vhffP~~AD~y 136 (202)
.|.+|.+ |+|..|+.|.+.|-.|...|..
T Consensus 72 ~C~ffak-G~C~~G~~C~y~H~lPt~~d~~ 100 (240)
T 3u1l_A 72 FCLFFAK-GMCCLGPKCEYLHHIPDEEDIG 100 (240)
T ss_dssp BCHHHHT-TCCSCGGGCSSBBSCCCHHHHH
T ss_pred EcCcccc-CCCCCCCCCCccCCCCCccchh
Confidence 7888877 8999999999998777655543
No 233
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=63.24 E-value=9.1 Score=31.62 Aligned_cols=22 Identities=5% Similarity=0.037 Sum_probs=18.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCC
Q 044941 76 SEAFADHQ-NAQQALETVAQQVP 97 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P 97 (202)
...+.|+| |.|.++..+++...
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~ 99 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIE 99 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHT
T ss_pred CCEEEEEeecCCHHHHHHHHHhC
Confidence 45799998 99999999988643
No 234
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=62.15 E-value=11 Score=34.38 Aligned_cols=84 Identities=5% Similarity=-0.065 Sum_probs=52.8
Q ss_pred CcceeecC-C------hHHHHHHHHHH-CCCC-----CccccccccchhhhccCCCCCCceeee--ee----cC------
Q 044941 76 SEAFADHQ-N------AQQALETVAQQ-VPNF-----GTEHDKAHCPLHLKTGACRFGQRCSRV--HF----YP------ 130 (202)
Q Consensus 76 ~~~~~d~~-g------~G~ll~~ll~~-~P~l-----dl~~d~~~~~~~~k~gacr~~dRcs~v--hf----fP------ 130 (202)
...+.|+| | .|..+..++++ +|+. |+... +. ....+++++ +. |+
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~---m~--------~~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDK---SH--------VDELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCC---GG--------GCBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHH---Hh--------hcCCCcEEEEecccccchhhhhhcc
Confidence 35799998 5 35555566655 5763 22111 11 023467766 32 22
Q ss_pred -CCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 131 -NKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 131 -~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
...|+++. + ..|.| ++..+.|++++..|+|||.+++.|..
T Consensus 286 d~sFDlVis-d--------gsH~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 286 YGPFDIVID-D--------GSHIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HCCEEEEEE-C--------SCCCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cCCccEEEE-C--------Ccccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 34688764 3 34655 45678999999999999999998866
No 235
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=61.99 E-value=11 Score=31.52 Aligned_cols=93 Identities=10% Similarity=0.024 Sum_probs=50.2
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---CccccccccchhhhccCCCCCCceeee----ee--cC-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTEHDKAHCPLHLKTGACRFGQRCSRV----HF--YP-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v----hf--fP-~~AD~ylLk~m~~~P 145 (202)
..++|+| |.|.++..+++. ..+ |+......+.... ...-.++..+.++ ++ +| ...|+++.... .
T Consensus 76 ~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~~-~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~-~-- 150 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEVP-RITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVG-E-- 150 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCCC-CCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-C--
T ss_pred CEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhhh-hhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCc-c--
Confidence 5799998 999999888876 332 3222211111000 0000122244443 33 34 44788876431 1
Q ss_pred cccccCCCCHHH--HHHHHHHHHhhCCCCC--EEEE
Q 044941 146 FQWVLTTWTDDE--CKLIMENCYKALPAGG--KLIA 177 (202)
Q Consensus 146 ~k~VLHdW~Dee--~~~IL~~~~~AL~~gG--rLlI 177 (202)
+..+|.-++ ..+.|+.++..|+||| .+++
T Consensus 151 ---~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 151 ---SSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ---cCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 223333222 3358899999999999 7666
No 236
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=60.46 E-value=10 Score=31.96 Aligned_cols=93 Identities=12% Similarity=-0.049 Sum_probs=50.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---CccccccccchhhhccCCCCCCceeee----ee--cC-CCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GTEHDKAHCPLHLKTGACRFGQRCSRV----HF--YP-NKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl~~d~~~~~~~~k~gacr~~dRcs~v----hf--fP-~~AD~ylLk~m~~~P 145 (202)
..++|+| |.|.++..+++. ..+ |+......+.... ...-.++..++++ ++ +| ...|+++.... .
T Consensus 84 ~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~~-~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~-~-- 158 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEKP-RLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIG-E-- 158 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCC-CCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCC-C--
T ss_pred CEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhch-hhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCC-c--
Confidence 5799998 999999988887 332 3222211111100 0000122245544 33 35 44788876431 1
Q ss_pred cccccCCCC-HHH-HHHHHHHHHhhCCCCC--EEEE
Q 044941 146 FQWVLTTWT-DDE-CKLIMENCYKALPAGG--KLIA 177 (202)
Q Consensus 146 ~k~VLHdW~-Dee-~~~IL~~~~~AL~~gG--rLlI 177 (202)
+..+|. |+. ..+.|+.++..|+||| .+++
T Consensus 159 ---~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 159 ---SNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ---CCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 222332 222 3358899999999999 7666
No 237
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=60.25 E-value=2.4 Score=36.29 Aligned_cols=92 Identities=10% Similarity=0.021 Sum_probs=58.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCCceeee--ee--c-C-CCcceeeeehhccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF--Y-P-NKSCTLLIKNMYNV 144 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf--f-P-~~AD~ylLk~m~~~ 144 (202)
..++|.+ |.|.++..+++.... . |. +.....+....+.. ++.++|+.. |. | + ..+|.++|.-.
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N--~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p--- 201 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPGENIADRILMGYV--- 201 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCCCSCEEEEEECCC---
T ss_pred CEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEeCcHHHhccccCCCEEEECCC---
Confidence 5699986 999999888876432 1 33 22233344445444 688899887 42 3 3 34788877531
Q ss_pred ccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCC
Q 044941 145 KFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPD 184 (202)
Q Consensus 145 P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~ 184 (202)
. .+...|..+...|++||.|.+.+++-.+
T Consensus 202 -~----------~~~~~l~~a~~~lk~gG~ih~~~~~~e~ 230 (278)
T 3k6r_A 202 -V----------RTHEFIPKALSIAKDGAIIHYHNTVPEK 230 (278)
T ss_dssp -S----------SGGGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred -C----------cHHHHHHHHHHHcCCCCEEEEEeeeccc
Confidence 1 1234667777888999999888776443
No 238
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=60.21 E-value=2.9 Score=35.19 Aligned_cols=76 Identities=5% Similarity=-0.029 Sum_probs=42.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC-Ccccccc---ccchhhhccCCCCCCceeee--eec--C-CCcceeeeehhccccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF-GTEHDKA---HCPLHLKTGACRFGQRCSRV--HFY--P-NKSCTLLIKNMYNVKF 146 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l-dl~~d~~---~~~~~~k~gacr~~dRcs~v--hff--P-~~AD~ylLk~m~~~P~ 146 (202)
..++|+| |.|.++..+++...++ ++..+.. .+...... .+..++++++ ++. + ...|+++. |
T Consensus 30 ~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~~~~v~~~~~D~~~~~~~~fD~vv~-n------ 100 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQG--TPVASKLQVLVGDVLKTDLPFFDTCVA-N------ 100 (285)
T ss_dssp CEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTT--STTGGGEEEEESCTTTSCCCCCSEEEE-E------
T ss_pred CEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHh--cCCCCceEEEEcceecccchhhcEEEE-e------
Confidence 4799998 9999999999986654 3333222 22222211 1233577776 442 2 23676554 4
Q ss_pred ccccCCCCHHHHHHHHH
Q 044941 147 QWVLTTWTDDECKLIME 163 (202)
Q Consensus 147 k~VLHdW~Dee~~~IL~ 163 (202)
.-.+|+.+-..++|.
T Consensus 101 --lpy~~~~~~~~~~l~ 115 (285)
T 1zq9_A 101 --LPYQISSPFVFKLLL 115 (285)
T ss_dssp --CCGGGHHHHHHHHHH
T ss_pred --cCcccchHHHHHHHh
Confidence 223555555555553
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=60.16 E-value=3.5 Score=35.25 Aligned_cols=23 Identities=22% Similarity=0.209 Sum_probs=19.0
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN 98 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ 98 (202)
..++.|.+ |+|.++..+++..+.
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~ 154 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLEL 154 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHT
T ss_pred CCEEEeCCCCccHHHHHHHHHHHH
Confidence 35799997 999999999987753
No 240
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=59.64 E-value=3.5 Score=27.97 Aligned_cols=25 Identities=28% Similarity=0.696 Sum_probs=21.1
Q ss_pred cccccchhhhccCCCCCCceeeeee
Q 044941 104 DKAHCPLHLKTGACRFGQRCSRVHF 128 (202)
Q Consensus 104 d~~~~~~~~k~gacr~~dRcs~vhf 128 (202)
-...|..+.+.|.|.+|++|.+.|-
T Consensus 11 kt~~C~~f~~~G~C~~G~~C~f~H~ 35 (77)
T 1m9o_A 11 KTELCRTYSESGRCRYGAKCQFAHG 35 (77)
T ss_dssp CSCCCSGGGGTSCCTTTTTCSSCSS
T ss_pred cchhCHHhhhCCCcCCCCCccCCCC
Confidence 3577988888899999999999973
No 241
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=59.00 E-value=27 Score=30.86 Aligned_cols=56 Identities=4% Similarity=-0.093 Sum_probs=33.4
Q ss_pred CCCCceeee--eec----CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCC--CCEEEEee
Q 044941 118 RFGQRCSRV--HFY----PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPA--GGKLIACE 179 (202)
Q Consensus 118 r~~dRcs~v--hff----P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~--gGrLlI~E 179 (202)
++.+++++. +++ |...|+++. ||+.-.- -=++++...+|+.+.+.+++ ||++.|+-
T Consensus 280 gl~~~I~~~~~D~~~l~~~~~fD~Iv~-----NPPYG~r-l~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 280 GLEDVVKLKQMRLQDFKTNKINGVLIS-----NPPYGER-LLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp TCTTTEEEEECCGGGCCCCCCSCEEEE-----CCCCTTT-TSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCCCceEEEECChHHCCccCCcCEEEE-----CCchhhc-cCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 677788887 443 334565543 2441111 11356777888877777765 89987764
No 242
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=57.76 E-value=1.1 Score=35.69 Aligned_cols=76 Identities=3% Similarity=-0.035 Sum_probs=46.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee---cC----CCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP----NKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP----~~AD~ylLk~m~ 142 (202)
..++|+| |.|.++..+++..-++ |. +..+..+... ..+++++ ++ .| ...|+++...
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-- 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIVSRR-- 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEEEES--
T ss_pred CeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEEeCC--
Confidence 5799998 9999999999873222 11 1111111111 2245555 33 22 2367776542
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEE
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLI 176 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLl 176 (202)
+...+|++++..|+|||+++
T Consensus 120 --------------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 --------------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp --------------CCSGGGGGHHHHEEEEEEEE
T ss_pred --------------CHHHHHHHHHHHcCCCcEEE
Confidence 24477889999999999998
No 243
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=57.32 E-value=7.2 Score=34.22 Aligned_cols=97 Identities=9% Similarity=0.108 Sum_probs=56.8
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCCC-ceeee--ee---cC------CCcceeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFGQ-RCSRV--HF---YP------NKSCTLLI 138 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~d-Rcs~v--hf---fP------~~AD~ylL 138 (202)
..+.|.+ |+|.++..+++.... . |. +..+..+....+.. ++.+ +++++ +. .+ ...|++++
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 4799996 999999999985432 2 21 22233334433322 4444 77776 32 22 24688876
Q ss_pred ehhcccccccc---cCCCC-HHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 139 KNMYNVKFQWV---LTTWT-DDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 139 k~m~~~P~k~V---LHdW~-Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
- |+.+. -+.++ .+...++++.+...|.|||.|++..+
T Consensus 292 D-----PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 292 D-----PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp C-----CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred C-----CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 22111 12222 34456788888999999999877654
No 244
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=55.64 E-value=3.2 Score=33.72 Aligned_cols=23 Identities=4% Similarity=0.043 Sum_probs=18.8
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN 98 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ 98 (202)
...++|+| |.|.++..+++..-+
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~~~ 53 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKISKQ 53 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHSSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhCCe
Confidence 35799998 999999999988633
No 245
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=53.86 E-value=9.8 Score=33.12 Aligned_cols=97 Identities=11% Similarity=0.023 Sum_probs=57.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeee--ee---cC------CCcceeeeeh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRV--HF---YP------NKSCTLLIKN 140 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~v--hf---fP------~~AD~ylLk~ 140 (202)
..++|++ |.|.++..+++..-++ |. +.....+....+.. ++.+ +++. +. .+ ...|++++-
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n--~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d- 286 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLN--GLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD- 286 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHT--TCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC-
T ss_pred CeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--CCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC-
Confidence 4699996 9999999999872222 22 22233344433322 3333 6665 32 12 346888762
Q ss_pred hcccccccccCCCC----HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 141 MYNVKFQWVLTTWT----DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 141 m~~~P~k~VLHdW~----Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
|+.+..+.-. -+...++++.+...|+|||.|+++.+-
T Consensus 287 ----pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 ----PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp ----CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3322211111 145677899999999999999887754
No 246
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=53.20 E-value=12 Score=33.21 Aligned_cols=100 Identities=8% Similarity=-0.128 Sum_probs=57.3
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---Cc-cccccccchhhhccCCCCCCceeeeeec------CCCcceeeeehhcccc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---GT-EHDKAHCPLHLKTGACRFGQRCSRVHFY------PNKSCTLLIKNMYNVK 145 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---dl-~~d~~~~~~~~k~gacr~~dRcs~vhff------P~~AD~ylLk~m~~~P 145 (202)
..+.|++ |+|.++..+++..... |+ +..+..+....+.. ++.+++...+.+ +...|++++- |
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~n--g~~~~~~~~D~~~~l~~~~~~fD~Ii~d-----p 288 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRL--GLRVDIRHGEALPTLRGLEGPFHHVLLD-----P 288 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--TCCCEEEESCHHHHHHTCCCCEEEEEEC-----C
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHh--CCCCcEEEccHHHHHHHhcCCCCEEEEC-----C
Confidence 5799996 9999999999864442 21 12223333333322 344455433421 3237877763 3
Q ss_pred cccccCCCCH----HHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 146 FQWVLTTWTD----DECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 146 ~k~VLHdW~D----ee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
+.+.-..-+- ....++++.+.+.|+|||.|+++.+-..
T Consensus 289 P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 289 PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 3211111111 2345788888999999999988776544
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=52.46 E-value=14 Score=32.69 Aligned_cols=21 Identities=14% Similarity=-0.034 Sum_probs=16.5
Q ss_pred cceeecC-ChHHHHHHHHHHCC
Q 044941 77 EAFADHQ-NAQQALETVAQQVP 97 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P 97 (202)
..++|.. |+|+++.+.+....
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~ 224 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQ 224 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHT
T ss_pred CeEEEcCCCCCHHHHHHHHHhc
Confidence 4689986 99999988876543
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=48.71 E-value=37 Score=28.87 Aligned_cols=24 Identities=13% Similarity=0.063 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEee
Q 044941 156 DECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 156 ee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
+-+.++|+.++..|+|||++++..
T Consensus 148 ~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 148 GFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 345689999999999999998754
No 249
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=45.71 E-value=14 Score=27.03 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=30.3
Q ss_pred CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 130 PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 130 P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
|..+.+++|+|||. .--.-+++....|...+++...++|.|.-+
T Consensus 4 p~ps~vv~L~Nm~~-----~~e~~d~~~~~el~edl~~~f~kfG~V~~v 47 (114)
T 3s6e_A 4 PLATQCFQLSNMFN-----PQTEEEVGWDTEIKDDVIEECNKHGGVIHI 47 (114)
T ss_dssp CCCCSEEEEESSCC-----TTTCCSTTHHHHHHHHHHHHHTTTTCCSEE
T ss_pred CCCCcEEEEECCCC-----hHHccChhHHHHHHHHHHHHHhccCCEEEE
Confidence 34467999999984 111234556778888888888899987433
No 250
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=45.20 E-value=33 Score=27.75 Aligned_cols=22 Identities=5% Similarity=-0.052 Sum_probs=19.0
Q ss_pred cceeecC-ChHHHHHHHHHHCCC
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN 98 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~ 98 (202)
..++|+| |.|.++..++++..+
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~~~ 54 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRCNF 54 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSE
T ss_pred CEEEEEeCCchHHHHHHHHcCCe
Confidence 4799998 999999999998744
No 251
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=45.06 E-value=11 Score=32.94 Aligned_cols=96 Identities=11% Similarity=0.046 Sum_probs=57.0
Q ss_pred cceeecC-ChHHHHHHHHHHCC-CC---Cc-cccccccchhhhccCCCC-CCceeee--eec---C------CCcceeee
Q 044941 77 EAFADHQ-NAQQALETVAQQVP-NF---GT-EHDKAHCPLHLKTGACRF-GQRCSRV--HFY---P------NKSCTLLI 138 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P-~l---dl-~~d~~~~~~~~k~gacr~-~dRcs~v--hff---P------~~AD~ylL 138 (202)
..++|++ |.|.++..+++... .+ |. +.....+....+.. ++ .+++++. +.+ + ...|++++
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 4799996 99999999998642 22 21 12223333333322 44 4477776 422 2 34688776
Q ss_pred ehhcccccccc-----cCCCCHHHHHHHHHHHHhhCCCCCEEEEeee
Q 044941 139 KNMYNVKFQWV-----LTTWTDDECKLIMENCYKALPAGGKLIACEP 180 (202)
Q Consensus 139 k~m~~~P~k~V-----LHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~ 180 (202)
- |+.+. +++.. +...+++..+...|.|||.|++..+
T Consensus 300 d-----pP~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 300 D-----PPKFVENKSQLMGAC-RGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp C-----CSSTTTCSSSSSCCC-THHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred C-----CCCCCCChhHHHHHH-HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3 22111 12221 4567889999999999999887654
No 252
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.02 E-value=6.4 Score=27.36 Aligned_cols=21 Identities=29% Similarity=0.634 Sum_probs=18.0
Q ss_pred cccchhhhccCCCCCCceeeee
Q 044941 106 AHCPLHLKTGACRFGQRCSRVH 127 (202)
Q Consensus 106 ~~~~~~~k~gacr~~dRcs~vh 127 (202)
..|..+ ..|.|.+|++|+|-|
T Consensus 21 ~LC~~~-~~G~C~~G~~C~FAH 41 (69)
T 2d9m_A 21 SICDRY-MNGTCPEGNSCKFAH 41 (69)
T ss_dssp SBCHHH-HHSCCSSCSSCSSBS
T ss_pred ccCccc-CcCCCCCCCccCCcC
Confidence 788887 567899999999986
No 253
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=43.91 E-value=19 Score=32.05 Aligned_cols=104 Identities=11% Similarity=0.027 Sum_probs=57.1
Q ss_pred CCcceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCC-CCC----Cceeee--e---ec------CCC
Q 044941 75 QSEAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGAC-RFG----QRCSRV--H---FY------PNK 132 (202)
Q Consensus 75 ~~~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gac-r~~----dRcs~v--h---ff------P~~ 132 (202)
...++.++| |.|.++.++++..|. . ++ +.+...|..++....+ .+. +|++++ | |. ...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 345788996 889999999976543 1 22 3344556666542211 133 277776 4 22 234
Q ss_pred cceeeeehhccccccccc-CCCCHHHHHHHHHHHHhhCCCCCEEEEee
Q 044941 133 SCTLLIKNMYNVKFQWVL-TTWTDDECKLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 133 AD~ylLk~m~~~P~k~VL-HdW~Dee~~~IL~~~~~AL~~gGrLlI~E 179 (202)
.|++++-- +..|..... +-.+.+-...+++.+++.|.|||.+++.-
T Consensus 268 fDvII~D~-~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDL-TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEEC-CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECC-CCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 78888753 111110000 11333444444555589999999887664
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=43.73 E-value=3.2 Score=38.41 Aligned_cols=98 Identities=6% Similarity=-0.079 Sum_probs=59.4
Q ss_pred cceeecC-ChHHHHHHHHHHCCCC---C-ccccccccchhhhccCCCCCCceeee-----ee---c-CCCcceeeeehhc
Q 044941 77 EAFADHQ-NAQQALETVAQQVPNF---G-TEHDKAHCPLHLKTGACRFGQRCSRV-----HF---Y-PNKSCTLLIKNMY 142 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~l---d-l~~d~~~~~~~~k~gacr~~dRcs~v-----hf---f-P~~AD~ylLk~m~ 142 (202)
.++.|+| |.|.++..+++.--+. | .+..+..|..+.+.. +. -.+++. ++ + +...|+++.-.
T Consensus 68 ~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~--~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e-- 142 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEEN--PD-FAAEFRVGRIEEVIAALEEGEFDLAIGLS-- 142 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTS--TT-SEEEEEECCHHHHHHHCCTTSCSEEEEES--
T ss_pred CeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhc--CC-CceEEEECCHHHHhhhccCCCccEEEECc--
Confidence 5799999 8888888888753322 2 122333444433211 10 123333 22 3 44589999888
Q ss_pred ccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccCCC
Q 044941 143 NVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDD 185 (202)
Q Consensus 143 ~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~~~ 185 (202)
++|...|.+...-+..|+..+.++|+.+++..+..+.
T Consensus 143 ------~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 143 ------VFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKEE 179 (569)
T ss_dssp ------CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTTS
T ss_pred ------chhcCCCHHHHHHHHHHHHHhccccceeeEEeccccc
Confidence 5566666665555666888888888888777665543
No 255
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=42.76 E-value=25 Score=33.56 Aligned_cols=98 Identities=9% Similarity=0.083 Sum_probs=59.9
Q ss_pred cceeecC-ChHHHHHHHHHHCCC-C---Cc-cccccccchhhhccCCCCC-Cceeee--eec------CCCcceeeeehh
Q 044941 77 EAFADHQ-NAQQALETVAQQVPN-F---GT-EHDKAHCPLHLKTGACRFG-QRCSRV--HFY------PNKSCTLLIKNM 141 (202)
Q Consensus 77 ~~~~d~~-g~G~ll~~ll~~~P~-l---dl-~~d~~~~~~~~k~gacr~~-dRcs~v--hff------P~~AD~ylLk~m 141 (202)
..++|++ |+|.++..+++.... + |. +..+..+....+.. ++. ++++++ +.+ ....|++++-
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~n--gl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D-- 616 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLN--GLTGRAHRLIQADCLAWLREANEQFDLIFID-- 616 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--TCCSTTEEEEESCHHHHHHHCCCCEEEEEEC--
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEEecCHHHHHHhcCCCccEEEEC--
Confidence 4799996 999999998875443 1 22 22233344444332 454 578877 422 2347888763
Q ss_pred cccccccc-----cCCCC-HHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 142 YNVKFQWV-----LTTWT-DDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 142 ~~~P~k~V-----LHdW~-Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
|+.+. .+.|+ .+...++++.+...|+|||.|++.-+-
T Consensus 617 ---PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 ---PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ---CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ---CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 22111 12233 356778999999999999999855543
No 256
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=42.66 E-value=31 Score=24.45 Aligned_cols=46 Identities=22% Similarity=0.161 Sum_probs=32.8
Q ss_pred cceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 133 SCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 133 AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
+.+++|+||+. .----+|++...+...+++...++|.|.-+....+
T Consensus 5 s~vl~L~Nm~~-----~~~l~~d~~~~~~~~dl~~~f~k~G~V~~v~i~~~ 50 (105)
T 3v4m_A 5 TEVLCLMNMVL-----PEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP 50 (105)
T ss_dssp CSEEEEESSCC-----GGGSSSHHHHHHHHHHHHHHHHTTSCEEEEECCCC
T ss_pred CeEEEEECCCC-----HHHccChHHHHHHHHHHHHHHHccCCEEEEEEecc
Confidence 57999999873 11123566777888888888889999876654443
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=41.66 E-value=27 Score=30.71 Aligned_cols=55 Identities=5% Similarity=-0.113 Sum_probs=31.7
Q ss_pred CCCCceeee--eec----CCCcceeeeehhcccccccccCCCC-HHHHHHHHHHHHhhCCC--CCEEEEee
Q 044941 118 RFGQRCSRV--HFY----PNKSCTLLIKNMYNVKFQWVLTTWT-DDECKLIMENCYKALPA--GGKLIACE 179 (202)
Q Consensus 118 r~~dRcs~v--hff----P~~AD~ylLk~m~~~P~k~VLHdW~-Dee~~~IL~~~~~AL~~--gGrLlI~E 179 (202)
++.+++++. +++ |...|+++.- |+. . .... .++..++++.+.+.|++ |+++.|+-
T Consensus 281 gl~~~i~~~~~D~~~l~~~~~~D~Iv~N-----PPy-g-~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 281 GVDEYIEFNVGDATQFKSEDEFGFIITN-----PPY-G-ERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp TCGGGEEEEECCGGGCCCSCBSCEEEEC-----CCC-C-CSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred CCCCceEEEECChhhcCcCCCCcEEEEC-----CCC-c-CccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 556678777 443 3446665542 331 1 1122 45667778777666654 88887764
No 258
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=41.41 E-value=32 Score=25.65 Aligned_cols=28 Identities=4% Similarity=-0.123 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHHHhhCCCC--CEEEEeee
Q 044941 153 WTDDECKLIMENCYKALPAG--GKLIACEP 180 (202)
Q Consensus 153 W~Dee~~~IL~~~~~AL~~g--GrLlI~E~ 180 (202)
-+|+.+.++++.+.+++.+| |+|.|.+.
T Consensus 81 v~de~ve~vv~~I~~~~~tg~~GkIFV~~V 110 (119)
T 2cz4_A 81 VSEEVALRILQRLQEEYFPHYAVIAYVENV 110 (119)
T ss_dssp ECHHHHHHHHHHHHHHTTTTSCCEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHhcCCCCEEEEEEEe
Confidence 37899999999999888887 99988774
No 259
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=39.20 E-value=16 Score=29.37 Aligned_cols=69 Identities=25% Similarity=0.397 Sum_probs=46.3
Q ss_pred CCCCCcccccccCcchhhccCC----------cEEEEecccccCCCCCCCCCCCCCCCCCCCCCCCCCCcceeec-----
Q 044941 18 CDEDDDWESVEEGPAEIIWQGN----------EIIIRKKKVRVPKKDANPLSKKEDVDRPTSNPLPPQSEAFADH----- 82 (202)
Q Consensus 18 ~~~~~~we~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~d~----- 82 (202)
-..|++|.-++-|++.-.|.|. |-.++=... ++||.+.|- ++|...
T Consensus 54 K~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP---------------~tYP~tPPe----I~Fp~ldgkt~ 114 (168)
T 3kpa_A 54 KASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIP---------------VTYPQAPPE----IALPELEGKTV 114 (168)
T ss_dssp HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECC---------------TTTTTSCCC----CBCGGGTTTCS
T ss_pred ccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCC---------------ccCCCCCCE----eecccccCcCc
Confidence 3568999999999999999998 544443333 677777542 344432
Q ss_pred ----CC----hHHHHHHHHHHCCCCCccccc
Q 044941 83 ----QN----AQQALETVAQQVPNFGTEHDK 105 (202)
Q Consensus 83 ----~g----~G~ll~~ll~~~P~ldl~~d~ 105 (202)
+| +-++.-..++..|.||+.+.+
T Consensus 115 kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 115 KMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp SEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 11 124777788888988766554
No 260
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=30.85 E-value=17 Score=26.27 Aligned_cols=22 Identities=27% Similarity=0.742 Sum_probs=14.1
Q ss_pred ccccchhhhccCCCCCCceeeee
Q 044941 105 KAHCPLHLKTGACRFGQRCSRVH 127 (202)
Q Consensus 105 ~~~~~~~~k~gacr~~dRcs~vh 127 (202)
...|.++. .|.|..|+.|.+.|
T Consensus 13 ~~lC~~f~-~G~C~~G~~C~f~H 34 (98)
T 2cqe_A 13 RELCKFYI-TGFCARAENCPYMH 34 (98)
T ss_dssp CSBCTTTT-TTCCSCSTTCSSBS
T ss_pred CccCcccc-cCcCCCCCCCCCCC
Confidence 45566664 56677777777764
No 261
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=30.35 E-value=29 Score=25.42 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=27.2
Q ss_pred CcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeec
Q 044941 132 KSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPV 181 (202)
Q Consensus 132 ~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~v 181 (202)
.+.+++|+||+. .-+|.|+ +-..+++.+.++|.|.=+...
T Consensus 19 ps~vl~L~Nm~~------~~el~dd----leedl~eef~k~G~V~~v~I~ 58 (118)
T 3ue2_A 19 ESTVMVLRNMVD------PKDIDDD----LEGEVTEECGKFGAVNRVIIY 58 (118)
T ss_dssp SCCEEEEESCSC------GGGCCTT----HHHHHHHHHTTTSCEEEEEEE
T ss_pred CCCEEEEECCCC------HHHHHHH----HHHHHHHHHhccCCEeEEEEe
Confidence 378999999873 3356654 446677777889987544433
No 262
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=29.62 E-value=22 Score=30.63 Aligned_cols=95 Identities=15% Similarity=0.113 Sum_probs=53.0
Q ss_pred ceeecC-ChHHHHHHHHHHCCCC-----C-ccccccccchhhhc-cCCCC-CCceeee--e---ec---CCCcceeeeeh
Q 044941 78 AFADHQ-NAQQALETVAQQVPNF-----G-TEHDKAHCPLHLKT-GACRF-GQRCSRV--H---FY---PNKSCTLLIKN 140 (202)
Q Consensus 78 ~~~d~~-g~G~ll~~ll~~~P~l-----d-l~~d~~~~~~~~k~-gacr~-~dRcs~v--h---ff---P~~AD~ylLk~ 140 (202)
.+.=+| |.|.++.++++..|-- + -+.+.+.|..++.. ..+.+ ..|++.+ | |. +...|++++--
T Consensus 86 ~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~ 165 (294)
T 3o4f_A 86 HVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDC 165 (294)
T ss_dssp EEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESC
T ss_pred eEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeC
Confidence 333345 8888999998644431 2 24455667776632 11122 4577776 4 22 45578887653
Q ss_pred hcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEe
Q 044941 141 MYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIAC 178 (202)
Q Consensus 141 m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~ 178 (202)
+. |..-.-+= ...+.|+.|+++|.|+|.+++.
T Consensus 166 -~d-p~~~~~~L----~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 166 -TD-PIGPGESL----FTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp -CC-CCCTTCCS----SCCHHHHHHHHTEEEEEEEEEE
T ss_pred -CC-cCCCchhh----cCHHHHHHHHHHhCCCCEEEEe
Confidence 21 11000000 1346788888888888887664
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=24.86 E-value=48 Score=29.35 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=17.1
Q ss_pred HHHHHHHHhhCCCCCEEEEee
Q 044941 159 KLIMENCYKALPAGGKLIACE 179 (202)
Q Consensus 159 ~~IL~~~~~AL~~gGrLlI~E 179 (202)
...+..++..|++||++.++-
T Consensus 287 ~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 287 LNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhccCCEEEEEE
Confidence 478889999999999985554
No 264
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=22.67 E-value=1.3e+02 Score=26.67 Aligned_cols=23 Identities=17% Similarity=-0.038 Sum_probs=18.4
Q ss_pred CcceeecC-ChHHHHHHHHHHCCC
Q 044941 76 SEAFADHQ-NAQQALETVAQQVPN 98 (202)
Q Consensus 76 ~~~~~d~~-g~G~ll~~ll~~~P~ 98 (202)
...++|++ |.|.++..+++....
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~ 314 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFN 314 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCE
T ss_pred CCEEEEeeccchHHHHHHHHcCCE
Confidence 35799997 999999999986443
No 265
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=20.20 E-value=75 Score=22.41 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=26.0
Q ss_pred CCCcceeeeehhcccccccccCCCCHHHHHHHHHHHHhhCCCCCEEEEeeeccC
Q 044941 130 PNKSCTLLIKNMYNVKFQWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLP 183 (202)
Q Consensus 130 P~~AD~ylLk~m~~~P~k~VLHdW~Dee~~~IL~~~~~AL~~gGrLlI~E~vl~ 183 (202)
|..+.+++|+||+. | -+|.|+ +-+.+++...++|.|.=+..+.+
T Consensus 5 ~~~s~~l~l~Nm~~-~-----~~l~dd----~~~dl~~~f~~~G~V~~v~i~~~ 48 (105)
T 2pe8_A 5 KCPTKVVLLRNMVG-A-----GEVDED----LEVETKEECEKYGKVGKCVIFEI 48 (105)
T ss_dssp GSCCSEEEEESSSC-S-----CCC-------CHHHHHHHGGGGSCEEEEEEEEC
T ss_pred CCCCCEEEEEcCCC-h-----HHhhHH----HHHHHHHHHHhcCCEEEEEEecC
Confidence 34578999999872 2 245543 23455566678998866654443
Done!