BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044943
(107 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 122 bits (307), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 75/106 (70%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID 60
+ H+ EF+ ++ A A ++VI+ FTA+WCGPCRFI+P+F A K+ VFLKVD+D
Sbjct: 17 IACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVD 76
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 106
E ++VA ++N+ ++PTF FIK+G E DKVVGA K L+ I +H G
Sbjct: 77 ELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVG 122
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 115 bits (287), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 70/104 (67%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID 60
+ H+ + +L A + LV++ FTA+WCGPCRFI+P F +LA K V+FLKVD D
Sbjct: 19 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTD 78
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
E + VA+ W I ++PTF F+K GK +DKVVGA K L+ IA+H
Sbjct: 79 ELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 122
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 68/104 (65%)
Query: 4 HSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEAR 63
H+ EF+T + +LVI+ FTA+WCGPCR I+P+F A K+ +FLKVD+DE +
Sbjct: 12 HTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELK 71
Query: 64 DVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAGQ 107
DVA +N+ ++PTF FIK+G++VD VVG K + KI G
Sbjct: 72 DVAEAYNVEAMPTFLFIKDGEKVDSVVGGRKDDIHTKIVALMGS 115
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 109 bits (273), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 69/105 (65%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID 60
+ H+ ++ + +L+++ FTA+WC PC+ I+P+F LA K+ V FLKVD+D
Sbjct: 7 IACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVD 66
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
E + VA WN+ ++PTF F+K+GK VDK VGADK L +A+HA
Sbjct: 67 ELKAVAEEWNVEAMPTFIFLKDGKLVDKTVGADKDGLPTLVAKHA 111
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 72/106 (67%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID 60
+ +HS ++ ++ A A +LV++ FTA+WCGPCR ++P+F +LA K+ VFLKVD+D
Sbjct: 15 ISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVD 74
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 106
E + +A ++++ ++PTF F+K G D+VVGA K L K+ HA
Sbjct: 75 ELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTAKVGLHAA 120
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 71/106 (66%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID 60
+ +HS ++ ++ A A +LV++ FTA+WCGP R ++P+F +LA K+ VFLKVD+D
Sbjct: 18 ISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPSRIMAPVFADLAKKFPNAVFLKVDVD 77
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 106
E + +A ++++ ++PTF F+K G D+VVGA K L K+ HA
Sbjct: 78 ELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTAKVGLHAA 123
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 101 bits (252), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 68/99 (68%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I + ++ KL+ A+R ++V+ F+A WCGPC+ I+P + L+ Y ++FL +D+DE
Sbjct: 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDEL 88
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 101
D + W I + PTFFF+++G++VDK+VGA+K L +KI
Sbjct: 89 SDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + S+PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASECEVKSMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 67/99 (67%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I + ++ KL+ A+R ++V+ F+A WCGP R I+P + L+ Y ++FL +D+DE
Sbjct: 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDEL 88
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 101
D + W I + PTFFF+++G++VDK+VGA+K L +KI
Sbjct: 89 SDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+A
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDA 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + + PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASEAEVKATPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 99.4 bits (246), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + S+PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASESEVKSMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ SASE+++ L + + LV++ F ATWCGPC+ I+P+ A +Y+ F K+D+DE
Sbjct: 12 LKSASEYDSALASGDK---LVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEV 68
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
DVA + + S+PT F K GKEV +VVGA+ +A+++ IA +
Sbjct: 69 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASN 110
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ SASE+++ L + + LV++ F ATWCGPC+ I+P+ A +Y+ F K+D+DE
Sbjct: 5 LKSASEYDSALASGDK---LVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEV 61
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
DVA + + S+PT F K GKEV +VVGA+ +A+++ IA +
Sbjct: 62 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASN 103
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + +PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + +PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASEXEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASECEVKCTPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 96.3 bits (238), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGP + I P F +L+ KY+ V+FL+VD+D++
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDS 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + S+PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASESEVKSMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 95.9 bits (237), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+++
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVNDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + +PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGP + I P F +L+ KY+ V+FL+VD+D+A
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPAKMIKPFFHSLSEKYSNVIFLEVDVDDA 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + + PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASEAEVKATPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 95.5 bits (236), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGP + I P F +L+ KY+ V+FL+VD+D+
Sbjct: 16 IESKTAFQEALDAAGD--KLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDC 73
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + S+PTF F K G++V + GA+K LE I +
Sbjct: 74 QDVASECEVKSMPTFQFFKKGQKVGEFSGANKEKLEATINE 114
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 95.5 bits (236), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ SASE+++ L + + LV++ F ATWCGP + I+P+ A +Y+ F K+D+DE
Sbjct: 13 LKSASEYDSALASGDK---LVVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEV 69
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
DVA + + S+PT F K GKEV +VVGA+ +A+++ IA +
Sbjct: 70 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASN 111
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ SASE+++ L + + LV++ F ATWCGP + I+P+ A +Y+ F K+D+DE
Sbjct: 5 LKSASEYDSALASGDK---LVVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEV 61
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
DVA + + S+PT F K GKEV +VVGA+ +A+++ IA +
Sbjct: 62 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASN 103
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 5 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARD 64
+ASEF++ A +LV++ F ATWCGPC+ I+P+ + +Y + F K+D+DE D
Sbjct: 7 TASEFDS----AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGD 62
Query: 65 VATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
VA + + ++PT KNGKEV KVVGA+ +A+++ IA +A
Sbjct: 63 VAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAANA 103
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 5 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARD 64
+ASEF++ A +LV++ F ATWCGPC+ I+P+ + +Y + F K+D+DE D
Sbjct: 13 TASEFDS----AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGD 68
Query: 65 VATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
VA + + ++PT KNGKEV KVVGA+ +A+++ IA +A
Sbjct: 69 VAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAANA 109
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ S +EF++ ++ LVI+ F A WCGPC+ I+P + + YTK+VF+KVD+DE
Sbjct: 13 VTSQAEFDSIISQN----ELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEV 68
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 106
+V + NI S+PTF KNG VD ++GA+ SAL++ I ++A
Sbjct: 69 SEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLIEKYAA 112
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGP + I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + +PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASECEVKRMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+A
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDA 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+DVA ++ I +PT KNG+ VGA
Sbjct: 63 QDVAPKYGIRGIPTLLLFKNGEVAATKVGA 92
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From
Litopenaeus Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From
Litopenaeus Vannamei
Length = 105
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ +F +LN A +LV++ F ATWCGPC+ I+P L+ + VVFLKVD+DE
Sbjct: 5 VKDQEDFTKQLNEAGN--KLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDEC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSAL 97
D+A I +PTF F+KNG+++D + GA+ L
Sbjct: 63 EDIAQDNQIACMPTFLFMKNGQKLDSLSGANYDKL 97
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+LV+L F ATWCGPC+ ISP L++++ VV LKVD+DE D+A +NI S+PTF F
Sbjct: 26 KLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVF 85
Query: 80 IKNGKEVDKVVGADKSALERKI 101
+KNG +V++ GA+ LE I
Sbjct: 86 LKNGVKVEEFAGANAKRLEDVI 107
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDE 61
+ ++ + +L A+ +LV+L F ATWCGPC+ ISP L++++ VV LKVD+DE
Sbjct: 5 VKDKADLDGQLTKASG--KLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE 62
Query: 62 ARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 101
D+A +NI S+PTF F+KNG +V++ GA+ LE I
Sbjct: 63 CEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVI 102
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 5 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARD 64
+ASEF++ A +LV++ F ATWCGP + I+P+ + +Y + F K+D+DE D
Sbjct: 13 TASEFDS----AIAQDKLVVVDFYATWCGPSKMIAPMIEKFSEQYPQADFYKLDVDELGD 68
Query: 65 VATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
VA + + ++PT KNGKEV KVVGA+ +A+++ IA +A
Sbjct: 69 VAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAANA 109
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATW GP + I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWSGPSKMIKPFFHSLSEKYSNVIFLEVDVDDC 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + +PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 89.4 bits (220), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 12 KLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT--KVVFLKVDIDEARDVATRW 69
+ T ++V++ F ATWCGPC+ I P+F ++ KV F KVD+DE +A
Sbjct: 25 QFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEV 84
Query: 70 NIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
I ++PTF F KNG+++D VVGAD S L+ I QH+
Sbjct: 85 GIRAMPTFVFFKNGQKIDTVVGADPSKLQAAITQHS 120
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 88.6 bits (218), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
RL+++ F A WCGPCR I+P LA + +V F KVD+D+ + A ++++ ++PTF FI
Sbjct: 20 RLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFI 79
Query: 81 KNGKEVDKVVGADKSALERKIAQH 104
K+GKEVD+ GA+++ L I +H
Sbjct: 80 KDGKEVDRFSGANETKLRETITRH 103
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
+LV++ F ATWCGPC+ I+PLF L+ KY +F+KVD+D+ + A ++NI ++PTF I
Sbjct: 34 KLVVVDFFATWCGPCKTIAPLFKELSEKYD-AIFVKVDVDKLEETARKYNISAMPTFIAI 92
Query: 81 KNGKEVDKVVGADKSALERKIAQ 103
KNG++V VVGA + +E I +
Sbjct: 93 KNGEKVGDVVGASIAKVEDMIKK 115
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
+LV++ F ATWCGPC+ I+PLF L+ KY +F+KVD+D+ + A ++NI ++PTF I
Sbjct: 25 KLVVVDFFATWCGPCKTIAPLFKELSEKYD-AIFVKVDVDKLEETARKYNISAMPTFIAI 83
Query: 81 KNGKEVDKVVGADKSALERKIAQ 103
KNG++V VVGA + +E I +
Sbjct: 84 KNGEKVGDVVGASIAKVEDMIKK 106
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 86.3 bits (212), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ S +F+ +L+ A RL ++ FT CGPC I+P F+++++KY + VFL+VD+ +
Sbjct: 6 VGSDPDFQPELSGA--GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQC 63
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
+ A NI + PTF F +N +D+ GAD LE KI QH
Sbjct: 64 QGTAATNNISATPTFQFFRNKVRIDQYQGADAVGLEEKIKQH 105
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
I S + F+ L+AA +LV++ F+ATWCGPC+ I P F +L+ KY+ V+FL+VD+D+
Sbjct: 5 IESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDX 62
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQ 103
+DVA+ + +PTF F K G++V + GA+K LE I +
Sbjct: 63 QDVASEXEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
+++ F ATWCGPC+ + P T L Y V F+K D+DE+ D+A + ++PTF K+
Sbjct: 33 LVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKD 92
Query: 83 GKEVDKVVGADKSALERKI 101
G+ + K++GA+ +ALE+ I
Sbjct: 93 GQLIGKIIGANPTALEKGI 111
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDE 61
I S + ++ +L + +++ FTATWCGPC+ I+PLF L++ Y KV+FLKVD+D
Sbjct: 7 IDSKAAWDAQLAKGKEEHKPIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 66
Query: 62 ARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
VA I ++PTF K+G + D +VGA + L+ +A+HA
Sbjct: 67 VAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHA 110
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
++V++ F A WC PC ++P+ LA+ Y +V F K++ +E++D+A R+ I S+PT F
Sbjct: 24 KIVVVDFWAEWCAPCLILAPVIEELANDYPQVAFGKLNTEESQDIAMRYGIMSLPTIMFF 83
Query: 81 KNGKEVDKVVGA 92
KNG+ VD+++GA
Sbjct: 84 KNGELVDQILGA 95
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDE 61
I S + ++ +L + +++ FTATWCGPC+ I+PLF L++ Y KV+FLKVD+D
Sbjct: 7 IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 66
Query: 62 ARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
VA I ++PTF K+G + D +VGA + L+ +A+HA
Sbjct: 67 VAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHA 110
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V++ F A WCGPC+ I+P+ LA +Y+ K+ K++ DEA +AT++NI S+PT F K
Sbjct: 20 VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 79
Query: 82 NGKEVDKVVGA-DKSALERKIAQH 104
NG+ + ++GA KS L I ++
Sbjct: 80 NGERKESIIGAVPKSTLTDSIEKY 103
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V++ F A WCGPC+ I+P+ LA +Y+ K+ K++ DEA +AT++NI S+PT F K
Sbjct: 21 VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80
Query: 82 NGKEVDKVVGA-DKSALERKIAQH 104
NG+ + ++GA KS L I ++
Sbjct: 81 NGERKESIIGAVPKSTLTDSIEKY 104
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDV 65
++F++K+ + + ++ F ATWCGPC+ I+P+ LA+ Y K LK+D+DE
Sbjct: 12 ADFDSKVESGVQ-----LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 66 ATRWNIGSVPTFFFIKNGKEVDKVVG 91
A ++ + S+PT K+G+ VDKVVG
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVG 92
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 3 IHSASEFETKL-NAATRALRLVILYFTATWCGPCRFISPLFTNLASK-YTKVVFLKVDID 60
I +F+ ++ N+ T V++ F A WCGPC+ + P + +K + KVV KVDID
Sbjct: 17 IQDGPDFQDRVVNSETP----VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 72
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVG-ADKSALE 98
+ D+A + + +VPT +KNG VDK VG D+ LE
Sbjct: 73 DHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLE 111
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
+ ++ F A WC PC ++P+ LA Y +V F K++ DE D+A R+ + S+PT F
Sbjct: 17 EIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFF 76
Query: 81 KNGKEVDKVVGA-DKSALERKIAQHAGQ 107
K+G+ VD+++GA + +E +I G+
Sbjct: 77 KDGEPVDEIIGAVPREEIEIRIKNLLGE 104
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+H E LN A LV++ F ATWCGPC+ + + ++A V F+KVD+D+
Sbjct: 6 VHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKN 65
Query: 63 RDVATRWNIGSVPTFFFI-KNGKEV---DKVVGADKSALERKIAQ 103
+ A + + S+P FF+ K G E+ D+ VGAD S ++ I +
Sbjct: 66 GNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADVSRIKADIEK 110
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V++ F A WCGP + I+P+ LA +Y+ K+ K++ DEA +AT++NI S+PT F K
Sbjct: 21 VMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 80
Query: 82 NGKEVDKVVGA-DKSALERKIAQH 104
NG+ + ++GA KS L I ++
Sbjct: 81 NGERKESIIGAVPKSTLTDSIEKY 104
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDV 65
++F++K+ + + ++ F ATWCG C+ I+P+ LA+ Y K LK+D+DE
Sbjct: 11 ADFDSKVESGVQ-----LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPST 65
Query: 66 ATRWNIGSVPTFFFIKNGKEVDKVVG 91
A ++ + S+PT K+G+ VDKVVG
Sbjct: 66 AAKYEVMSIPTLIVFKDGQPVDKVVG 91
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDV 65
++F++K+ + + ++ F ATWCG C+ I+P+ LA+ Y K LK+D+DE
Sbjct: 12 ADFDSKVESGVQ-----LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 66 ATRWNIGSVPTFFFIKNGKEVDKVVG 91
A ++ + S+PT K+G+ VDKVVG
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVG 92
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ V++ F A WCGPCR I+P+ LA +Y KV +KV++DE + A ++ I S+PT
Sbjct: 20 KPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLL 79
Query: 80 IKNGKEVDKVVGAD-KSALERKIAQH 104
KNG+ VD++VGA K AL+ +I +H
Sbjct: 80 FKNGQVVDRLVGAQPKEALKERIDKH 105
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
LV++ F A WC PCR I+P+ +A +Y K++ K+D+DE A R+ + S+PT
Sbjct: 21 LVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILF 80
Query: 81 KNGKEVDKVVGAD-KSALERKIAQH 104
K+G+ V+ +VGA K + KI +H
Sbjct: 81 KDGQPVEVLVGAQPKRNYQAKIEKH 105
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
LV++ F A WC PCR I+P+ +A +Y K++ K+D+DE A R+ + S+PT
Sbjct: 20 LVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILF 79
Query: 81 KNGKEVDKVVGAD-KSALERKIAQH 104
K+G+ V+ +VGA K + KI +H
Sbjct: 80 KDGQPVEVLVGAQPKRNYQAKIEKH 104
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 5 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARD 64
SA +FE L +A L++++F A W C ++ + LA + +V F+K++ + +
Sbjct: 25 SAGQFEELLR--LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPE 82
Query: 65 VATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHA 105
V+ ++ I SVPTF F KN +++D++ GA L +K+ +HA
Sbjct: 83 VSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHA 123
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin
W28a Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin
W28a Mutant
Length = 106
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDV 65
++F++K+ + + ++ F AT CGPC+ I+P+ LA+ Y K LK+D+DE
Sbjct: 11 ADFDSKVESGVQ-----LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPST 65
Query: 66 ATRWNIGSVPTFFFIKNGKEVDKVVG 91
A ++ + S+PT K+G+ VDKVVG
Sbjct: 66 AAKYEVMSIPTLIVFKDGQPVDKVVG 91
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 69.3 bits (168), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 5 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARD 64
SA +FE L +A L++++F A W C ++ + LA + +V F+K++ + +
Sbjct: 19 SAGQFEELLR--LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPE 76
Query: 65 VATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQHAG 106
V+ ++ I SVPTF F KN +++D++ GA L +K+ +HA
Sbjct: 77 VSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHAS 118
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDV 65
++F++K+ + + ++ F ATWCG + I+P+ LA+ Y K LK+D+DE
Sbjct: 12 ADFDSKVESGVQ-----LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 66 ATRWNIGSVPTFFFIKNGKEVDKVVG 91
A ++ + S+PT K+G+ VDKVVG
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVG 92
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 10 ETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATR 68
E + R +LV++ A WC PC P++ +A KY K VF ++++DE + +A +
Sbjct: 11 EENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADK 70
Query: 69 WNIGSVPTFFFIKNGKEVDKVVGA-DKSALERKIAQH 104
+++ ++PT NG+ VD +VGA D+ LE + ++
Sbjct: 71 YSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKY 107
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 15 AATRALRLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGS 73
+A + +V+ F A WCGPC+ I+P+ L + K+ +K+D+DE ++ A ++ + S
Sbjct: 12 SAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMS 71
Query: 74 VPTFFFIKNGKEVDKVVG-ADKSALERKIAQH 104
+PT +K+G+ V+ VG K AL+ + +H
Sbjct: 72 IPTLLVLKDGEVVETSVGFKPKEALQELVNKH 103
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 18 RALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPT 76
+A LV++ F A WCGPC+ I P + ++ KV KV+ID+ + + + S+PT
Sbjct: 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPT 77
Query: 77 FFFIKNGKEVDKVVGA 92
+++GK +DK VGA
Sbjct: 78 LMLVRDGKVIDKKVGA 93
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLAS-KYTKVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ V++ F ATWCGPC+ ++P+ +A+ + T + K+D+D + A + + S+PT
Sbjct: 26 KPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLIL 85
Query: 80 IKNGKEVDKVVGAD-KSALERKIAQ 103
K+G+ V ++VGA K+AL R+++
Sbjct: 86 FKDGQPVKRIVGAKGKAALLRELSD 110
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V++ F A WCGPCR I+P+ +A +Y K+ +K++ DE+ +VA+ + I S+PT K
Sbjct: 22 VLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81
Query: 82 NGKEVDKVVGA 92
GK+ + ++GA
Sbjct: 82 GGKKCETIIGA 92
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLAS-KYTKVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ V++ F ATWCGPC+ ++P+ +A+ + T + K+D+D + A + + S+PT
Sbjct: 31 KPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLIL 90
Query: 80 IKNGKEVDKVVGAD-KSALERKIAQ 103
K+G+ V ++VGA K+AL R+++
Sbjct: 91 FKDGQPVKRIVGAKGKAALLRELSD 115
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
++S +F ++ L + +FTA WCGPC+ I +A ++ V F KVD D
Sbjct: 24 VYSVEQFRNIMSEDI----LTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNN 79
Query: 63 RDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKI 101
++ ++ + +PTF ++GK + V+GA+ L +K+
Sbjct: 80 SEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGMLRQKL 118
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 10 ETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATR 68
+ A + + V++ F A WCGPCR ++P+ A + KV K+++DE + ++
Sbjct: 7 DANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQ 66
Query: 69 WNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIA 102
+ I S+PT K G+ V +++G K LE ++A
Sbjct: 67 FGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLA 101
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 10 ETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATR 68
+ A + + V++ F A WCGPCR ++P+ A + KV K+++DE + ++
Sbjct: 7 DANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQ 66
Query: 69 WNIGSVPTFFFIKNGKEVDKVVG-ADKSALERKIA 102
+ I S+PT K G+ V +++G K LE ++A
Sbjct: 67 FGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLA 101
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V++ F A WCGPCR ++P+ A + KV K+++DE + +++ I S+PT K
Sbjct: 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFK 79
Query: 82 NGKEVDKVVG-ADKSALERKIA 102
G+ V +++G K LE ++A
Sbjct: 80 GGRPVKQLIGYQPKEQLEAQLA 101
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
L ++ F A WCGPCR +SP+ LA + ++ +KV++DE +A R+ + SVPT
Sbjct: 52 LTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111
Query: 81 KNGKEVDKVVGAD-KSALERKIAQH 104
+ G V VGA + LE ++ +
Sbjct: 112 RRGAPVATWVGASPRRVLEERLRPY 136
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 62.0 bits (149), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V++ F A WCGPCR ++P+ A + KV K+++DE + +++ I S+PT K
Sbjct: 20 VLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFK 79
Query: 82 NGKEVDKVVG-ADKSALERKIA 102
G+ V +++G K LE ++A
Sbjct: 80 GGEPVKQLIGYQPKEQLEAQLA 101
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 61.6 bits (148), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 15 AATRALRLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGS 73
+A + +V+ F A WCGP + I+P+ L + K+ +K+D+DE ++ A ++ + S
Sbjct: 12 SAETSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMS 71
Query: 74 VPTFFFIKNGKEVDKVVG-ADKSALERKIAQH 104
+PT +K+G+ V+ VG K AL+ + +H
Sbjct: 72 IPTLLVLKDGEVVETSVGFKPKEALQELVNKH 103
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLAS-KYTKVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ V++ F ATWCGP + ++P+ +A+ + T + K+D+D + A + + S+PT
Sbjct: 28 KPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLIL 87
Query: 80 IKNGKEVDKVVGAD-KSALERKIAQ 103
K+G+ V ++VGA K+AL R+++
Sbjct: 88 FKDGQPVKRIVGAKGKAALLRELSD 112
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I S+PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRSIPTLLLFKNGEVAATKVGA 93
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
++ F A WCGPCR +P+F A++ KV F+KV+ + ++TR+ I S+PT +N
Sbjct: 59 VIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIXLYRN 118
Query: 83 GKEVDKVVGA 92
GK +D + GA
Sbjct: 119 GKXIDXLNGA 128
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In
Hexagonal (P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In
Hexagonal (P61) Space Group
Length = 108
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + FET + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFETDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In
Hexagonal (P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In
Hexagonal (P61) Space Group
Length = 108
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IHSASE-FETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH E F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDESFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In
Hexagonal (P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In
Hexagonal (P61) Space Group
Length = 108
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ ++A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTEDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 15 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 71
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 72 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 103
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IHSASE-FETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHVTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli
At 1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli
At 1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On
The Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On
The Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine
And Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine
And Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine
And Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In
Hexagonal (P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In
Hexagonal (P61) Space Group
Length = 108
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In
Hexagonal (P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In
Hexagonal (P61) Space Group
Length = 108
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20
Structures
Length = 108
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 15 AATRALRLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGS 73
+A + +V+ F A WCGP + I+P+ L + K+ +K+D+DE ++ A ++ + S
Sbjct: 12 SAETSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMS 71
Query: 74 VPTFFFIKNGKEVDKVVG-ADKSALER 99
+PT +K+G+ V+ VG K AL+
Sbjct: 72 IPTLLVLKDGEVVETSVGFKPKEALQE 98
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKY-TKVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ V++ F A WCGPCR I+P +A++Y K+ +K++IDE A ++ + S+PT
Sbjct: 24 KPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNV 83
Query: 80 IKNGKEVDKVVGA-DKSALERKI 101
+ G+ +VGA K+A+ R +
Sbjct: 84 YQGGEVAKTIVGAKPKAAIVRDL 106
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID-EARDVATRWNIGSVPTFFFIK 81
V+L WCGPC+ ++P + LA +Y V+FLK+D + E + +A I VPTF +K
Sbjct: 40 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILK 99
Query: 82 NGKEVDKVVGADKSAL 97
V +V GA L
Sbjct: 100 ENSVVGEVTGAKYDKL 115
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In
Hexagonal (P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In
Hexagonal (P61) Space Group
Length = 108
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGDVAATKVGA 93
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In
Hexagonal (P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In
Hexagonal (P61) Space Group
Length = 108
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAACKVGA 93
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID-EARDVATRWNIGSVPTFFFIK 81
V+L WCGPC+ ++P + LA +Y V+FLK+D + E + +A I VPTF +K
Sbjct: 28 VVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILK 87
Query: 82 NGKEVDKVVGA 92
V +V GA
Sbjct: 88 ENSVVGEVTGA 98
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 6 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I PT KNG+ VGA
Sbjct: 63 QNPGTAPKYGIRGTPTLLLFKNGEVAATKVGA 94
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ I+ F A WCGPC+ ++P+ L+ +Y K+ KV++D+ ++A + I S+PT +F
Sbjct: 52 KPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWF 111
Query: 80 IKNGKEVDKVVGA 92
+ E +GA
Sbjct: 112 VPMKGEPQVNMGA 124
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ I+ F A WCGPC+ ++P+ LA +Y ++V KVD ++ +++A + I S+P+ F
Sbjct: 39 KPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILF 98
Query: 80 I 80
I
Sbjct: 99 I 99
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T L A A +++ F A WCGPC+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDLVKADGA---ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYIERGIPTLLLFKNGEVAATKVGA 93
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGP + I+P+ +A +Y K+ K++ID
Sbjct: 25 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNID 81
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 82 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 113
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGPC+ I+ + +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCGP + I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDV 65
+EFE+++ +A + V++YF A+WCGPC+ +SPL A+ Y+ ++ +K++ID
Sbjct: 15 AEFESEV---LKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTT 71
Query: 66 ATRWNIGSVPTFFFIKNGKEVDKVVG 91
++ + VP +K + +D G
Sbjct: 72 VKKYKVEGVPALRLVKGEQILDSTEG 97
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WCG C+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASK--YTKVVFLKVD 58
+ I+ +F T L +L++LYF +W PC+ + +F ++++ + V FL +D
Sbjct: 3 IEINDQEQF-TYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSID 61
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGAD 93
DE +++ + I +VP F I G + ++ GAD
Sbjct: 62 ADENSEISELFEISAVPYFIIIHKGTILKELSGAD 96
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFF 79
+ I+ F A WCGPC+ ++P+ L+ +Y K+ KV++D+ ++A + I +PT +F
Sbjct: 52 KPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQGIPTIWF 111
Query: 80 IKNGKEVDKVVGA 92
+ E +GA
Sbjct: 112 VPMKGEPQVNMGA 124
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli
Thioredoxin With An Arginine Insertion In The Active
Site
Length = 109
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCG-PCRFISPLFTNLASKYT-KVVFLKVDI 59
IH + F+T + A A +++ F A WCG PC+ I+P+ +A +Y K+ K++I
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNI 61
Query: 60 DEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
D+ A ++ I +PT KNG+ VGA
Sbjct: 62 DQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 94
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID-EARDVATRWNIGSVPTFFF 79
+ V+L WCGP + ++P + LA +Y V+FLK+D + E + +A I VPTF
Sbjct: 25 KPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKI 84
Query: 80 IKNGKEVDKVVGA 92
+K V +V GA
Sbjct: 85 LKENSVVGEVTGA 97
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFL-KVDIDEARDVATRWNIGSVPTFFFIK 81
+++ F A WCGPCR ++P F A+ V L K+D VA R I +P F
Sbjct: 67 LLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFH 126
Query: 82 NGKEVDKVVGA 92
G+E+ + GA
Sbjct: 127 KGRELARAAGA 137
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WC C+ I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 19/106 (17%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGP--------------CRFISPLFTNLAS 47
IH + F+T + A A +++ F A WCGP C+ I+P+ +A
Sbjct: 6 IHLTDDSFDTDVLKADGA---ILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIAD 62
Query: 48 KYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+Y K+ K++ID+ A ++ I +PT KNG+ VGA
Sbjct: 63 EYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 108
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 13 LNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFL-KVDIDEARDVATRWNI 71
+N +++LYF A WC C S L Y K ++L KVD+D+ +A ++++
Sbjct: 35 INGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSV 94
Query: 72 GSVPTFFFIKN 82
S+PT +KN
Sbjct: 95 KSLPTIILLKN 105
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 16 ATRALRLVILYFTATWCGPCRFISPLFTNLASKY----TKVVFLKVDIDEARDVATRWNI 71
A A + +++ F A WCG C+ ++P + A K +++ KVD E D+A ++ +
Sbjct: 20 ALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGV 79
Query: 72 GSVPTFFFIKNG 83
PT F +NG
Sbjct: 80 RGYPTIKFFRNG 91
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli
Trxa (Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli
Trxa (Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli
Trxa (Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli
Trxa (Caca)
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 3 IH-SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDID 60
IH + F+T + A A +++ F A WC + I+P+ +A +Y K+ K++ID
Sbjct: 5 IHLTDDSFDTDVLKADGA---ILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 61 EARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+ A ++ I +PT KNG+ VGA
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGA 93
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V+ YF + C ++P+ +LA++Y + + K+D D + +A ++ + ++PT + +
Sbjct: 29 VLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQ 88
Query: 82 NGKEVDKVVG 91
NG+ VD G
Sbjct: 89 NGQPVDGFQG 98
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain
Of Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYTK----VVFLKVDIDEARDVATRWNIGSVPTF 77
++++ F A WCG C+ ++P + A + +K + KVD E D+A R+++ PT
Sbjct: 26 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTL 85
Query: 78 FFIKNGKEVD 87
+ G+ D
Sbjct: 86 KIFRKGRPFD 95
>pdb|3QDN|A Chain A, Putative Thioredoxin Protein From Salmonella Typhimurium
pdb|3QDN|B Chain B, Putative Thioredoxin Protein From Salmonella Typhimurium
Length = 287
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
V+ YF + C ++P+ +LA++Y + + K+D D + +A ++ + ++PT + +
Sbjct: 29 VLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQXIAAQFGLRAIPTVYLFQ 88
Query: 82 NGKEVDKVVG 91
NG+ VD G
Sbjct: 89 NGQPVDGFQG 98
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 17 TRALRLVILYFTATWCGPCRFISPLFTNLASK----YTKVVFLKVDIDEARDVATRWNIG 72
T A + + F A WCG C+ ++P + L+ K V +VD R++ +++++
Sbjct: 20 TIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVR 79
Query: 73 SVPTFFFIKNGKEVDKVVGA-DKSALERKIAQHA 105
PT + GK+V + G D +L R + A
Sbjct: 80 GYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQA 113
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 17 TRALRLVILYFTATWCGPCRFISPLFTNLASK----YTKVVFLKVDIDEARDVATRWNIG 72
T A + + F A WCG C+ ++P + L+ K V +VD R++ +++++
Sbjct: 18 TIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVR 77
Query: 73 SVPTFFFIKNGKEVDKVVGA-DKSALERKIAQHA 105
PT + GK+V + G D +L R + A
Sbjct: 78 GYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQA 111
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 17 TRALRLVILYFTATWCGPCRFISPLFTNLASK----YTKVVFLKVDIDEARDVATRWNIG 72
T A + + F A WCG C+ ++P + L+ K V +VD R++ +++++
Sbjct: 13 TIAEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVR 72
Query: 73 SVPTFFFIKNGKEVDKVVGA-DKSALERKIAQHA 105
PT + GK+V + G D +L R + A
Sbjct: 73 GYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQA 106
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
+++ F A WC PC I F N + Y V + +D+D + + NI ++PTF F N
Sbjct: 43 IVIKFGAVWCKPCNKIKEYFKNQLN-YYYVTLVDIDVDIHPKLNDQHNIKALPTFEFYFN 101
Query: 83 GKE----VDKVVGADKSALERKIAQHA 105
V V GA+++ +E+ ++
Sbjct: 102 LNNEWVLVHTVEGANQNDIEKAFQKYC 128
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLAS----KYTKVVFLKVDIDEARDVATRWNIGSVPTFF 78
V+L F A WCG C+ +P + +A+ K + K+D A +A+R+++ PT
Sbjct: 35 VLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIK 94
Query: 79 FIKNGKEVD 87
+K G+ VD
Sbjct: 95 ILKKGQAVD 103
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYTK----VVFLKVDIDEARDVATRWNIGSVPTF 77
++++ F A WCG C+ ++P + A + +K + KVD D+A R+++ PT
Sbjct: 149 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208
Query: 78 FFIKNGKEVD 87
+ G+ D
Sbjct: 209 KIFRKGRPYD 218
>pdb|2DJ0|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Related Transmembrane Protein 2
Length = 137
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKY--TKVVFLKVDIDEARDVATRWNIGS------VP 75
I+ F A W C+ +P++ +L+ KY T + F KVD+ DV+TR+ + + +P
Sbjct: 30 IVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLP 89
Query: 76 TFFFIKNGKEVDKVVGADKSA 96
T + GKE + DK
Sbjct: 90 TLILFQGGKEAMRRPQIDKKG 110
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
+I+ FT +WC PC+ + P F +AS+ + F +D ++A NI ++P+
Sbjct: 20 IIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDAEKTMAELNIRTLPSLALFV 79
Query: 82 NG 83
+G
Sbjct: 80 DG 81
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKY---TKVVFLKVDIDEARDVATRWNIGSVPTFFF 79
V++ F A WCG C+ + P++T+L KY +V K+D ++ + PT +F
Sbjct: 28 VLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYF 87
Query: 80 IKNGKEVDKVV----GADKSALERKIAQHA 105
+G + + + D L + I +HA
Sbjct: 88 APSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 9 FETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFL-KVDIDEARDVAT 67
FE+++ + T + L+++ F A WCG C+ ++P + A++ +V L KVD +
Sbjct: 11 FESRI-SDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCN 69
Query: 68 RWNIGSVPTFFFIKNGKEV 86
++ + PT ++G+E
Sbjct: 70 KYGVSGYPTLKIFRDGEEA 88
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKY----TKVVFLKVDIDEARDVATRWNIGSVPTFF 78
V+L F A WCG C+ +P + +AS + K+D A +A+++++ PT
Sbjct: 37 VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIK 96
Query: 79 FIKNGKEVD 87
+K G+ VD
Sbjct: 97 ILKKGQAVD 105
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTK---VVFLKVDIDEARDVATRWNIGSVPTFFF 79
V++ F A WCG C+ + P + L K +K +V K+D A DV + + + PT +F
Sbjct: 373 VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDA-TANDVPSPYEVRGFPTIYF 431
Query: 80 IKNGKEVD 87
K+++
Sbjct: 432 SPANKKLN 439
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 9 FETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFL-KVDIDEARDVAT 67
FE+++ + T + L+++ F A WCG + ++P + A++ +V L KVD +
Sbjct: 11 FESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCN 69
Query: 68 RWNIGSVPTFFFIKNGKE 85
++ + PT ++G+E
Sbjct: 70 KYGVSGYPTLKIFRDGEE 87
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTK---VVFLKVDIDEARDVATRWNIGSVPTFFF 79
V++ F A WCG C+ + P + L K +K +V K+D A DV + + + PT +F
Sbjct: 48 VLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDA-TANDVPSPYEVRGFPTIYF 106
Query: 80 IKNGKEVD 87
K+++
Sbjct: 107 SPANKKLN 114
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Query: 13 LNAATRALRLVILYFTATWCGPCRFISPLFTNLAS-------KYTKVVFLKVDIDEARDV 65
LN A AL + F A WC + + P+F + +VVF +VD D+ D+
Sbjct: 19 LNNADVAL----VNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDI 74
Query: 66 ATRWNIGSVPTFFFIKNG 83
A R+ I PT +NG
Sbjct: 75 AQRYRISKYPTLKLFRNG 92
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 9 FETKLNAATRALRLVILYFTATWCGPCRFISPLF--TNLASKY--TKVVFLKVDIDEARD 64
F L A +L+ + TWCGPC+ +S + +L + Y V LK+D+++
Sbjct: 16 FPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEG 75
Query: 65 VATR--WNIGSVPTFFFIK-NGKEVDKVVGA-DKSALERKI 101
V R + + + PT FI +G+ V ++VGA D L +K+
Sbjct: 76 VELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKV 116
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 28/108 (25%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYT----KVVFLKVD------------------- 58
+V L F A+WCGPCR P +KY +VV + +D
Sbjct: 30 VVYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLDAKTGDAXKFLAQVPAEFTV 89
Query: 59 -IDEARDVATRWNIGSVPTFFFI-KNGKEVDKVVG---ADKSALERKI 101
D + + PT F I +NGK + + VG ADK ALE++I
Sbjct: 90 AFDPKGQTPRLYGVKGXPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137
>pdb|1QK8|A Chain A, Tryparedoxin-I From Crithidia Fasciculata
pdb|1O7U|A Chain A, Radiation Induced Tryparedoxin-I
pdb|1O85|A Chain A, Radiation-Reduced Tryparedoxin-I
pdb|1O8W|A Chain A, Radiation-Reduced Tryparedoxin-I
Length = 146
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 2 GIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLK 56
GI + ++ + A +LV YF+A+WC PCR +P K+ +VVF
Sbjct: 10 GIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNFEVVFCT 69
Query: 57 VDIDE 61
D +E
Sbjct: 70 WDEEE 74
>pdb|1EWX|A Chain A, Crystal Structure Of Native Tryparedoxin I From
Crithidia Fasciculata
Length = 146
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 2 GIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLK 56
GI + ++ + A +LV YF+A+WC PCR +P K+ +VVF
Sbjct: 10 GIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNFEVVFCT 69
Query: 57 VDIDE 61
D +E
Sbjct: 70 WDEEE 74
>pdb|1OKD|A Chain A, Nmr-Structure Of Tryparedoxin 1
Length = 154
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 2 GIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLK 56
GI + ++ + A +LV YF+A+WC PCR +P K+ +VVF
Sbjct: 10 GIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNFEVVFCT 69
Query: 57 VDIDE 61
D +E
Sbjct: 70 WDEEE 74
>pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Tryparedoxin I
Length = 153
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 2 GIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLK 56
GI + ++ + A +LV YF+A+WC PCR +P K+ +VVF
Sbjct: 9 GIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNFEVVFCT 68
Query: 57 VDIDE 61
D +E
Sbjct: 69 WDEEE 73
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 13 LNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTK--VVFLKVDIDEARDVATRWN 70
N ++ LV+ F A WCG C+ ++P + A + + ++D E +D+ N
Sbjct: 24 FNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHN 83
Query: 71 IGSVPTFFFIKN 82
I P+ KN
Sbjct: 84 IPGFPSLKIFKN 95
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKY----TKVVFLKVDIDE--ARDVATRWNIGSVP 75
+++LY+ A WCG C+ ++P + LA Y + V+ K+D E R V I P
Sbjct: 379 VLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVV----IEGYP 433
Query: 76 TFFFIKNGKEVDKVVGADKSALE 98
T GK+ + VV +L+
Sbjct: 434 TIVLYPGGKKSESVVYQGSRSLD 456
>pdb|3GNJ|A Chain A, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|B Chain B, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|C Chain C, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|D Chain D, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
Length = 111
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYTKVV-FLKVDIDEARDVATRWNIGSVPTFFFIKN 82
++ F+ C C+ ++P+ L Y + F VD++E + + R+++ VP + K+
Sbjct: 26 LVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKD 85
Query: 83 GKEVDKVVG-ADKSALERKIA 102
G+ K G + +E+ IA
Sbjct: 86 GEYKGKXAGDVEDDEVEQXIA 106
>pdb|2LUS|A Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda
Thioredoxin Related Protein 16 And Its Role In
Regulating Transcription Factor Nf-Kb Activity
Length = 143
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 10 ETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT------KVVFLKVDIDE 61
E N A + ++ YF+A WC PCR +P+ ++ S+ +++F+ D E
Sbjct: 16 EVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSE 73
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLKVDIDEA 62
+ V LYF+A+WC PCR +P+ K+ +VV + D +E+
Sbjct: 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENES 75
>pdb|2LST|A Chain A, Solution Structure Of A Thioredoxin From Thermus
Thermophilus
Length = 130
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 21 RLVILYFTATWCGPCRFIS------PLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSV 74
R+V++YF + C C+ ++ P + L V + VD E +++A R+ +
Sbjct: 20 RMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGT 79
Query: 75 PTFFFI--KNG--KEVDKVVGADKSA 96
PTF F+ K G +EV ++ G+ A
Sbjct: 80 PTFVFLVPKAGAWEEVGRLFGSRPRA 105
>pdb|3HA9|A Chain A, The 1.7a Crystal Structure Of A Thioredoxin-like Protein
From Aeropyrum Pernix
Length = 165
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVD 58
+VIL+F A WC C +++ L L KY ++ + +D
Sbjct: 39 VVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAID 75
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 24 ILYFTATWCGPCRFISPLFTNLAS--KYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIK 81
++ F A WC C+ + P + + A + +V KVD+ E ++ R+ I ++PT + K
Sbjct: 26 MIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCK 85
Query: 82 NGK 84
+G+
Sbjct: 86 DGE 88
>pdb|1O8X|A Chain A, Mutant Tryparedoxin-I Cys43ala
Length = 146
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 2 GIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLK 56
GI + ++ + A +LV YF+A+WC P R +P K+ +VVF
Sbjct: 10 GIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCT 69
Query: 57 VDIDE 61
D +E
Sbjct: 70 WDEEE 74
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic
Fungal Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic
Fungal Protein Disulfide Isomerase
Length = 121
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTK------VVFLKVD 58
V++ F A WCG C+ ++P + L + Y K VV KVD
Sbjct: 28 VLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVD 69
>pdb|4EUY|A Chain A, Crystal Structure Of Thioredoxin-Like Protein Bce_0499
From Bacillus Cereus Atcc 10987
Length = 105
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFI 80
+LV+L+ CG C + Y V +++ + + +++A R+ + + PT
Sbjct: 19 QLVLLFIKTENCGVCDVXLRKVNYVLENYNYVEKIEILLQDXQEIAGRYAVFTGPTVLLF 78
Query: 81 KNGKEV 86
NGKE+
Sbjct: 79 YNGKEI 84
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKY 49
+ V YF+A+WC PCR +P K+
Sbjct: 49 KTVFFYFSASWCPPCRGFTPQLVEFYEKH 77
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVF--LKVDIDEARDVATRWNIGSVPTFF 78
++VI+ F ATWC PCR P L + F L V IDE VA F
Sbjct: 29 QVVIVNFWATWCPPCREEIPSXXRLNAAXAGKPFRXLCVSIDEGGKVAVE--------EF 80
Query: 79 FIKNGKEVDKVVGADK 94
F K G + ++ ADK
Sbjct: 81 FRKTGFTLPVLLDADK 96
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 22 LVILYFTATWCGPCRFISPLFTNLASKYTKVVFLK-VDIDEARDVATRWNIGSVPTFFFI 80
L ++ F A WCG C+ ++P + A+ VV + V+ D+ + + ++ + PT
Sbjct: 37 LWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTI--- 93
Query: 81 KNGKEVDKVVGADKSALERKIAQHAGQ 107
K+ GA+K+ E G+
Sbjct: 94 -------KIFGANKNKPEDYQGGRTGE 113
>pdb|2L6C|A Chain A, Solution Structure Of Desulfothioredoxin From
Desulfovibrio Vulgaris Hildenborough In Its Oxidized
Form
pdb|2L6D|A Chain A, Solution Structure Of Desulfothioredoxin From
Desulfovibrio Vulgaris Hildenborough In Its Reduced
Form
Length = 110
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKNG 83
I++F C C+ + + ++ +V VD + ++ VPT FI++G
Sbjct: 23 IVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDG 82
Query: 84 K 84
K
Sbjct: 83 K 83
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 19 ALRLVILYFTATWCGPCRFISP 40
A + V YF+A+WC PCR +P
Sbjct: 27 AGKTVFFYFSASWCPPCRAFTP 48
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 19 ALRLVILYFTATWCGPCRFISP 40
A + V YF+A+WC PCR +P
Sbjct: 28 AGKTVFFYFSASWCPPCRAFTP 49
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 19 ALRLVILYFTATWCGPCRFISP 40
A + V YF+A+WC PCR +P
Sbjct: 30 AGKTVFFYFSASWCPPCRAFTP 51
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 19 ALRLVILYFTATWCGPCRFISP 40
A + V YF+A+WC PCR +P
Sbjct: 30 AGKTVFFYFSASWCPPCRAFTP 51
>pdb|2E7P|A Chain A, Crystal Structure Of The Holo Form Of Glutaredoxin C1
From Populus Tremula X Tremuloides
pdb|2E7P|B Chain B, Crystal Structure Of The Holo Form Of Glutaredoxin C1
From Populus Tremula X Tremuloides
pdb|2E7P|C Chain C, Crystal Structure Of The Holo Form Of Glutaredoxin C1
From Populus Tremula X Tremuloides
pdb|2E7P|D Chain D, Crystal Structure Of The Holo Form Of Glutaredoxin C1
From Populus Tremula X Tremuloides
Length = 116
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYTKVVFLK--VDIDEARDVATRW-NIGSVPTFFFI 80
++ F+ T+CG C + L T + + Y KVV L D + + W G+VP F
Sbjct: 22 VVVFSKTYCGYCNRVKQLLTQVGASY-KVVELDELSDGSQLQSALAHWTGRGTVPNVFI- 79
Query: 81 KNGKEV 86
GK++
Sbjct: 80 -GGKQI 84
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYT-----KVVFLKVDIDEARDVATRWNIGSVPTFF 78
++ F A WCG C+ + P + AS+ KV VD + +A+R+ I PT
Sbjct: 29 MVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIK 88
Query: 79 FIKNGK 84
+ G+
Sbjct: 89 IFQKGE 94
>pdb|1Z7P|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|1Z7R|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From
Populus Tremula X Tremuloides
Length = 117
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYTKVVFLK--VDIDEARDVATRW-NIGSVPTFFFI 80
++ F+ T+CG C + L T + + Y KVV L D + + W G+VP F
Sbjct: 23 VVVFSKTYCGYCNRVKQLLTQVGASY-KVVELDELSDGSQLQSALAHWTGRGTVPNVFI- 80
Query: 81 KNGKEV 86
GK++
Sbjct: 81 -GGKQI 85
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 2 GIHSASEFE-TKLNAATRAL-----RLVILYFTATWCGPCRFISPLFTNLASKY 49
G SA+ F +N T +L + + + ATWCGPCR P L KY
Sbjct: 6 GNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKY 59
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYTKVV---FLKVDIDEARDVATRWNIGSVPTFFFI 80
++ F A WCG C+ +S F A + VV + D+++ + + ++++ PT
Sbjct: 39 LVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98
Query: 81 KNGK 84
+ K
Sbjct: 99 RPPK 102
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKY---TKVVFLKVD 58
V + F A WCG C+ ++P++ L Y +V K+D
Sbjct: 270 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD 308
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 24 ILYFTATWCGPCRFISPLFTNLASKYT-KVVFLKVDIDEARDVATRWNIGSVPT 76
++ F A WCGPC+ +P F LA KV KVD + I + P+
Sbjct: 25 VVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPS 78
>pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mixed Oxidized And Reduced
Forms
Length = 150
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKV 57
+ +L+F A WC C+ +P+ +A+ + +V F+ V
Sbjct: 40 KPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGV 76
>pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxidized Form
Length = 136
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKV 57
+ +L+F A WC C+ +P+ +A+ + +V F+ V
Sbjct: 26 KPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGV 62
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKY---TKVVFLKVD 58
V + F A WCG C+ ++P++ L Y +V K+D
Sbjct: 28 VFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD 66
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 21 RLVILYFTATWCGPCRFISP 40
++V+L FTA+WCG CR P
Sbjct: 34 KVVMLQFTASWCGVCRKEMP 53
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 24/92 (26%)
Query: 23 VILYFTATWCGPCR----FISPLFTNLASKYTKVV-------------FLK-------VD 58
V L F TWC PC+ +++ + + S+ ++V F+K V
Sbjct: 29 VFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVV 90
+D R V +++ +PT F I +V KVV
Sbjct: 89 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 120
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 24/92 (26%)
Query: 23 VILYFTATWCGPCR----FISPLFTNLASKYTKVV-------------FLK-------VD 58
V L F TWC PC+ +++ + + S+ ++V F+K V
Sbjct: 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVV 90
+D R V +++ +PT F I +V KVV
Sbjct: 89 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 120
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 24 ILYFTATWCGPCRFISPLFTNL----ASKYTKVV----------------FLKVD----- 58
IL+F +WC PC+ P F + S K+V F+K +
Sbjct: 38 ILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFP 97
Query: 59 --IDEARDVATRWNIGSVPTFFFIKNGKEVDK 88
+D ++ ++I ++PT F + E++K
Sbjct: 98 IVLDSKGELXKEYHIITIPTSFLLNEKGEIEK 129
>pdb|3Q6O|A Chain A, Oxidoreductase Fragment Of Human Qsox1
Length = 244
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 27 FTATWCGPCRFISPLFTNLASK---YTKVVFL-KVDIDEARD--VATRWNIGSVPT--FF 78
F A+WCG C +P + LA + ++L +D E + V +NI PT FF
Sbjct: 37 FFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFF 96
Query: 79 --FIKNGK-EVDKVVGADKSALERKI 101
F NG V V GAD L ++
Sbjct: 97 XAFTXNGSGAVFPVAGADVQTLRERL 122
>pdb|3LWA|A Chain A, The Crystal Structure Of A Secreted Thiol-Disulfide
Isomerase From Corynebacterium Glutamicum To 1.75a
Length = 183
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1 MGIHSASEFETKLNAATRALRLVILYFTATWCGPCR 36
+G S E T++N + ++VIL WC PCR
Sbjct: 40 IGGDSLXEEGTQINLSDFENQVVILNAWGQWCAPCR 75
>pdb|3RAZ|A Chain A, The Crystal Structure Of Thioredoxin-Related Protein
From Neisseria Meningitidis Serogroup B
Length = 151
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 13 LNAATRALRLVILYFTATWCGPCRFISPLFTNL--ASKYTKVVFLKVDIDEARDVA 66
L + +R+V L+ ATWCGPCR P + A K V + + +D + ++
Sbjct: 19 LQSLKAPVRIVNLW--ATWCGPCRKEXPAXSKWYKAQKKGSVDXVGIALDTSDNIG 72
>pdb|1I5G|A Chain A, Tryparedoxin Ii Complexed With Glutathionylspermidine
Length = 144
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 19 ALRLVILYFTATWCGPCRFISP 40
A + V YF+A+WC P R +P
Sbjct: 27 AGKTVFFYFSASWCPPSRAFTP 48
>pdb|1KNG|A Chain A, Crystal Structure Of Ccmg Reducing Oxidoreductase At 1.14
A
Length = 156
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 23/114 (20%)
Query: 2 GIHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLA-SKYTKVV------- 53
G+ + + L+ A ++ ++ A+WC PC +PL T L K ++V
Sbjct: 24 GLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDA 83
Query: 54 --------------FLKVDIDEARDVATRWNIGSVP-TFFFIKNGKEVDKVVGA 92
F +V +D + W + VP TF + G V K+VG
Sbjct: 84 ADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGP 137
>pdb|3FK8|A Chain A, The Crystal Structure Of Disulphide Isomerase From
Xylella Fastidiosa Temecula1
Length = 133
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 7 SEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTN-----LASKYTKVVFLKVDI 59
++ + L A R + +L F A WC CR + N L +K+ +VV K+D+
Sbjct: 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVV--KIDV 71
>pdb|3EMX|A Chain A, Crystal Structure Of Thioredoxin From Aeropyrum Pernix
pdb|3EMX|B Chain B, Crystal Structure Of Thioredoxin From Aeropyrum Pernix
Length = 135
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 58 DIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGADKSALERKIAQH 104
++ AR + + PT F K G+ VDK+VGA +L+ + A+
Sbjct: 77 ELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKARE 123
>pdb|2DBC|A Chain A, Solution Structure Of The Thioredoxin-Like Domain Of
Phosducin-Like Protein 2(Pdcl2)
Length = 135
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 5 SASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARD 64
S +++ ++ A + L +VI + ++ C ++ + LA K+ + F+K ++ +
Sbjct: 16 SGNQYVNEVTNAEKDLWVVIHLYRSS-VPMCLVVNQHLSVLARKFPETKFVKAIVNSCIE 74
Query: 65 VATRWNIGSVPTFFFIKNGKEVDKVVG 91
++ +PT F KNG+ K +G
Sbjct: 75 ---HYHDNCLPTIFVYKNGQIEGKFIG 98
>pdb|1SEN|A Chain A, Endoplasmic Reticulum Protein Rp19 O95881
Length = 164
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLF 42
IH + + K AA L L+++ +WCG C+ + P F
Sbjct: 30 IHWRTLEDGKKEAAASGLPLMVI-IHKSWCGACKALKPKF 68
>pdb|2K8V|A Chain A, Solution Structure Of Oxidised Erp18
Length = 157
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLF 42
IH + + K AA L L+++ +WCG C+ + P F
Sbjct: 23 IHWRTLEDGKKEAAASGLPLMVI-IHKSWCGACKALKPKF 61
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDID-EARD 64
+ +++ ATWC PCR P L K + F V I+ + RD
Sbjct: 61 KTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRD 105
>pdb|3KH7|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Reduced Ccmg From Pseudomonas Aeruginosa
pdb|3KH9|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Oxidized Ccmg From Pseudomonas Aeruginosa
Length = 176
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 3 IHSASEFETKLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEA 62
+ S + +L A + ++ TWC CR P T LA + VV ++ +
Sbjct: 41 LPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDD 98
Query: 63 RDVATRW 69
A +W
Sbjct: 99 NAAAIKW 105
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 24/92 (26%)
Query: 23 VILYFTATWCGPCR----FISPLFTNLASKYTKVV-------------FLK-------VD 58
V L F TWC P + +++ + + S+ ++V F+K V
Sbjct: 29 VFLNFWGTWCEPAKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVV 90
+D R V +++ +PT F I +V KVV
Sbjct: 89 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 120
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 24/92 (26%)
Query: 23 VILYFTATWCGPCR----FISPLFTNLASKYTKVV-------------FLK-------VD 58
V L F TW PC+ +++ + + S+ ++V F+K V
Sbjct: 29 VFLNFWGTWAEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVV 90
+D R V +++ +PT F I +V KVV
Sbjct: 89 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 120
>pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal Structure Of A Secreted
Mycobacterium Tuberculosis Disulfide Oxidoreductase
Homologous To E. Coli Dsbe: Implications For Functions
Length = 136
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 12 KLNAATRALRLVILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNI 71
+ A+ + +L+F WC C +P + +A+ V F+ +ATR ++
Sbjct: 16 PFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVG--------IATRADV 67
Query: 72 GSVPTF 77
G++ +F
Sbjct: 68 GAMQSF 73
>pdb|3C71|A Chain A, Struture Of A Resa Variant With A Dsba-Like Active Site
Motif (Cphc)
Length = 143
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 24/92 (26%)
Query: 23 VILYFTATWCGPCR----FISPLFTNLASKYTKVV-------------FLK-------VD 58
V L F TWC C+ +++ + + S+ ++V F+K V
Sbjct: 29 VFLNFWGTWCPHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 88
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVV 90
+D R V +++ +PT F I +V KVV
Sbjct: 89 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 120
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange
Protein, Thioredoxin Family Protein From Chlorobium
Tepidum Tls
Length = 165
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 13 LNAATRALRLVILYFTATWCGPCR 36
++A+ + I+ F ATWC PCR
Sbjct: 27 FSSASLKGKAYIVNFFATWCPPCR 50
>pdb|3C73|A Chain A, Structure Of Cehc Variant Resa
pdb|3C73|B Chain B, Structure Of Cehc Variant Resa
Length = 140
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 24/92 (26%)
Query: 23 VILYFTATWCGPCR----FISPLFTNLASKYTKVV-------------FLK-------VD 58
V L F TWC C+ +++ + + S+ ++V F+K V
Sbjct: 26 VFLNFWGTWCEHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVV 85
Query: 59 IDEARDVATRWNIGSVPTFFFIKNGKEVDKVV 90
+D R V +++ +PT F I +V KVV
Sbjct: 86 LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV 117
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 21 RLVILYFTATWCGPCRFISPLFTNLASKYTK--VVFLKVDIDE 61
++V++ F A+WC CR P L + K +V L V++++
Sbjct: 42 KIVLVNFWASWCPYCRDEXPSXDRLVKSFPKGDLVVLAVNVEK 84
>pdb|2G0F|A Chain A, Crystal Structure Of P144a Mutant Of E.Coli Ccmg Protein
Length = 168
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
V+L ATWC CR L+++ +VV + D + ++ +G+ P + +
Sbjct: 54 VLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGN-PYALSLFD 112
Query: 83 GKEVDKVVGAD 93
G D ++G D
Sbjct: 113 G---DGMLGLD 120
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 24/83 (28%)
Query: 23 VILYFTATWCGPCRFISPLFTN----LASKYTKVVFLKVD-------------------- 58
V L F TWC PC+ P N S+ ++V + V
Sbjct: 29 VFLNFWGTWCEPCKKEFPYXANQYKHFKSQGVEIVAVNVGESKIAVHNFXKSYGVNFPVV 88
Query: 59 IDEARDVATRWNIGSVPTFFFIK 81
+D R V +++ +PT F I
Sbjct: 89 LDTDRQVLDAYDVSPLPTTFLIN 111
>pdb|2B1L|A Chain A, Crystal Structure Of N-Terminal 57 Residue Deletion
Mutant Of E. Coli Ccmg Protein(Residues 58-185)
pdb|2B1L|B Chain B, Crystal Structure Of N-Terminal 57 Residue Deletion
Mutant Of E. Coli Ccmg Protein(Residues 58-185)
Length = 129
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
V+L ATWC CR L+++ +VV + D + ++ +G+ P + +
Sbjct: 15 VLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGN-PYALSLFD 73
Query: 83 GKEVDKVVGAD 93
G D ++G D
Sbjct: 74 G---DGMLGLD 81
>pdb|2CWR|A Chain A, Crystal Structure Of Chitin Biding Domain Of Chitinase
From Pyrococcus Furiosus
pdb|2CZN|A Chain A, Solution Structure Of The Chitin-Binding Domain Of
Hyperthermophilic Chitinase From Pyrococcus Furiosus
Length = 103
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 68 RWNIGSVPTFFFIKNGKEVDKV 89
WN G TF FI NG + DKV
Sbjct: 70 SWNKGPTATFGFIVNGPQGDKV 91
>pdb|2B1K|A Chain A, Crystal Structure Of E. Coli Ccmg Protein
Length = 168
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
V+L ATWC CR L+++ +VV + D + ++ +G+ P + +
Sbjct: 54 VLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGN-PYALSLFD 112
Query: 83 GKEVDKVVGAD 93
G D ++G D
Sbjct: 113 G---DGMLGLD 120
>pdb|3EVI|A Chain A, Crystal Structure Of The Thioredoxin-Fold Domain Of
Human Phosducin- Like Protein 2
pdb|3EVI|B Chain B, Crystal Structure Of The Thioredoxin-Fold Domain Of
Human Phosducin- Like Protein 2
Length = 118
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
VI++ + C ++ + LA K+ + F+K ++ ++ +PT F KN
Sbjct: 26 VIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC---IQHYHDNCLPTIFVYKN 82
Query: 83 GKEVDKVVG 91
G+ K +G
Sbjct: 83 GQIEAKFIG 91
>pdb|3K8N|A Chain A, Crystal Structure Of E. Coli Ccmg
Length = 185
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 23 VILYFTATWCGPCRFISPLFTNLASKYTKVVFLKVDIDEARDVATRWNIGSVPTFFFIKN 82
V+L ATWC CR L+++ +VV + D + ++ +G+ P + +
Sbjct: 71 VLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGN-PYALSLFD 129
Query: 83 GKEVDKVVGAD 93
G D ++G D
Sbjct: 130 G---DGMLGLD 137
>pdb|1R5Z|A Chain A, Crystal Structure Of Subunit C Of V-Atpase
pdb|1R5Z|B Chain B, Crystal Structure Of Subunit C Of V-Atpase
pdb|1R5Z|C Chain C, Crystal Structure Of Subunit C Of V-Atpase
pdb|1V9M|A Chain A, Crystal Structure Of The C Subunit Of V-Type Atpase From
Thermus Thermophilus
pdb|3J0J|M Chain M, Fitted Atomic Models Of Thermus Thermophilus V-Atpase
Subunits Into Cryo-Em Map
Length = 323
Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 55 LKVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKV 89
L+VD + R G P FF+K G+ VD+V
Sbjct: 194 LEVDAENLRTAFKLQGSGLAPDAFFLKGGRFVDRV 228
>pdb|3C8V|A Chain A, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
pdb|3C8V|B Chain B, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
pdb|3C8V|C Chain C, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
pdb|3C8V|D Chain D, Crystal Structure Of Putative Acetyltransferase
(Yp_390128.1) From Desulfovibrio Desulfuricans G20 At
2.28 A Resolution
Length = 496
Score = 25.8 bits (55), Expect = 6.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 75 PTFFFIKNGKEVDKVVGADKSALERKIAQHAG 106
P +IK+G E++ DK+ L++ I+Q AG
Sbjct: 212 PGQIWIKSGDELEFHYSFDKAILDKYISQEAG 243
>pdb|2AYT|A Chain A, The Crystal Structure Of A Protein Disulfide
Oxidoreductase From Aquifex Aeolicus
pdb|2AYT|B Chain B, The Crystal Structure Of A Protein Disulfide
Oxidoreductase From Aquifex Aeolicus
Length = 237
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 2 GIHSASEFETKLNAATRALRLV------ILYFTATWCGPCRFISPLFTNLASKYTKVVFL 55
GI S+ + +L+ T L V I F T CG C + + + A +
Sbjct: 112 GIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSK 171
Query: 56 KVDIDEARDVATRWNIGSVPTFFFIKNGKEVDKVVGA 92
+D E +D+A ++ + VP K V + VGA
Sbjct: 172 VIDASENQDLAEQFQVVGVPKIVI---NKGVAEFVGA 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,835,372
Number of Sequences: 62578
Number of extensions: 100137
Number of successful extensions: 614
Number of sequences better than 100.0: 203
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 341
Number of HSP's gapped (non-prelim): 206
length of query: 107
length of database: 14,973,337
effective HSP length: 72
effective length of query: 35
effective length of database: 10,467,721
effective search space: 366370235
effective search space used: 366370235
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)