Your job contains 1 sequence.
>044945
VIANIVILERNENVELSNGLAGCNEFMDKANGITDRFEERAVSIGHYADLDGISDQLPSS
SGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPF
DEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILM
IEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVF
GIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044945
(296 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154389 - symbol:LPA66 "LOW PSII ACCUMULATION ... 219 8.1e-29 3
TAIR|locus:2103483 - symbol:OTP84 "ORGANELLE TRANSCRIPT P... 225 5.9e-28 3
TAIR|locus:2078653 - symbol:AT3G02010 species:3702 "Arabi... 221 2.3e-27 3
TAIR|locus:2151501 - symbol:AT5G46460 species:3702 "Arabi... 212 2.8e-26 3
TAIR|locus:2077878 - symbol:AT3G08820 "AT3G08820" species... 215 1.2e-25 3
TAIR|locus:2125899 - symbol:AT4G33170 species:3702 "Arabi... 248 1.5e-25 2
TAIR|locus:2038603 - symbol:AT2G27610 "AT2G27610" species... 207 5.0e-25 3
TAIR|locus:2118964 - symbol:EMB2758 "embryo defective 275... 210 6.6e-25 3
TAIR|locus:2140235 - symbol:AT4G02750 species:3702 "Arabi... 195 8.8e-25 3
TAIR|locus:2115130 - symbol:AT4G37170 "AT4G37170" species... 218 6.6e-24 2
TAIR|locus:2091546 - symbol:AT3G13770 species:3702 "Arabi... 203 7.3e-24 3
TAIR|locus:2148101 - symbol:AT5G16860 "AT5G16860" species... 196 8.2e-23 3
TAIR|locus:2198546 - symbol:AT1G20230 "AT1G20230" species... 189 1.4e-22 3
TAIR|locus:4010713776 - symbol:AT3G26782 species:3702 "Ar... 201 1.9e-22 3
TAIR|locus:2102852 - symbol:CRR2 "AT3G46790" species:3702... 195 4.9e-22 3
TAIR|locus:2055919 - symbol:AT2G22070 "AT2G22070" species... 234 5.5e-22 2
TAIR|locus:2131939 - symbol:MEF29 "AT4G30700" species:370... 202 9.3e-22 2
TAIR|locus:2144143 - symbol:AT5G06540 species:3702 "Arabi... 187 2.5e-21 3
TAIR|locus:2154855 - symbol:AT5G66520 "AT5G66520" species... 197 2.8e-21 3
TAIR|locus:2096414 - symbol:AT3G03580 species:3702 "Arabi... 198 5.0e-21 3
TAIR|locus:2019160 - symbol:AT1G74630 species:3702 "Arabi... 176 2.6e-20 3
TAIR|locus:2012295 - symbol:AT1G09410 species:3702 "Arabi... 182 3.1e-20 3
TAIR|locus:2081635 - symbol:AT3G62890 species:3702 "Arabi... 208 3.1e-20 3
TAIR|locus:1009023396 - symbol:AT5G40405 "AT5G40405" spec... 192 3.4e-20 4
TAIR|locus:2119440 - symbol:AT4G13650 species:3702 "Arabi... 182 5.1e-20 3
TAIR|locus:2027554 - symbol:AT1G56690 species:3702 "Arabi... 189 1.6e-19 3
TAIR|locus:2202074 - symbol:CRR22 "CHLORORESPIRATORY REDU... 182 2.3e-19 3
TAIR|locus:2205200 - symbol:OTP82 "AT1G08070" species:370... 226 4.0e-19 2
TAIR|locus:2155740 - symbol:AT5G65570 species:3702 "Arabi... 163 6.3e-19 3
TAIR|locus:2049562 - symbol:AT2G01510 "AT2G01510" species... 188 8.0e-19 3
TAIR|locus:4010713895 - symbol:AT4G21065 "AT4G21065" spec... 234 9.8e-19 1
TAIR|locus:2130354 - symbol:AT4G14820 "AT4G14820" species... 181 1.0e-18 3
TAIR|locus:2090990 - symbol:AT3G14330 species:3702 "Arabi... 180 1.5e-18 4
TAIR|locus:2178188 - symbol:MEF7 "AT5G09950" species:3702... 179 2.8e-18 3
TAIR|locus:2034456 - symbol:AT1G31920 species:3702 "Arabi... 177 4.3e-18 3
TAIR|locus:2060640 - symbol:OTP81 "ORGANELLE TRANSCRIPT P... 175 4.9e-18 2
TAIR|locus:2205425 - symbol:AT1G68930 "AT1G68930" species... 182 1.1e-17 3
TAIR|locus:2082886 - symbol:EMB2261 "embryo defective 226... 174 3.8e-17 3
TAIR|locus:2130389 - symbol:LOI1 "lovastatin insensitive ... 183 4.5e-17 3
TAIR|locus:2130644 - symbol:AT4G15720 "AT4G15720" species... 185 4.9e-17 3
TAIR|locus:2167593 - symbol:AT5G44230 species:3702 "Arabi... 164 4.9e-17 3
TAIR|locus:2056794 - symbol:REME1 "required for efficienc... 171 5.3e-17 2
TAIR|locus:2032840 - symbol:AT1G16480 "AT1G16480" species... 210 6.1e-17 2
TAIR|locus:2056740 - symbol:OTP85 "ORGANELLE TRANSCRIPT P... 209 9.5e-17 2
TAIR|locus:2183931 - symbol:AT5G13230 species:3702 "Arabi... 188 1.3e-16 3
TAIR|locus:2010652 - symbol:AT1G04840 "AT1G04840" species... 179 2.4e-16 3
TAIR|locus:2097365 - symbol:AT3G49710 "AT3G49710" species... 167 2.5e-16 3
TAIR|locus:2127826 - symbol:MEF8S "MEF8 similar" species:... 178 1.6e-15 4
TAIR|locus:2124137 - symbol:DOT4 "DEFECTIVELY ORGANIZED T... 178 5.4e-15 2
TAIR|locus:505006130 - symbol:AT1G18485 species:3702 "Ara... 210 9.3e-15 1
TAIR|locus:2177537 - symbol:EMB3141 "AT5G50390" species:3... 158 1.2e-14 2
TAIR|locus:2053659 - symbol:AT2G15690 "AT2G15690" species... 202 1.7e-14 2
TAIR|locus:2126352 - symbol:AT4G37380 species:3702 "Arabi... 199 2.0e-14 2
TAIR|locus:2150936 - symbol:AT5G15340 species:3702 "Arabi... 170 2.4e-14 3
TAIR|locus:2164880 - symbol:EMB2744 "EMBRYO DEFECTIVE 274... 188 3.7e-14 2
TAIR|locus:2157368 - symbol:AT5G50990 "AT5G50990" species... 187 2.1e-13 2
TAIR|locus:2032955 - symbol:AT1G25360 "AT1G25360" species... 199 2.4e-13 1
TAIR|locus:2149664 - symbol:MEF1 "mitochondrial RNA editi... 190 3.0e-13 2
TAIR|locus:2170548 - symbol:AT5G40410 species:3702 "Arabi... 147 5.4e-13 3
TAIR|locus:2150690 - symbol:EMB175 "AT5G03800" species:37... 153 1.2e-12 3
TAIR|locus:2025946 - symbol:CRR28 "CHLORORESPIRATORY REDU... 167 1.4e-12 3
TAIR|locus:2129361 - symbol:AT4G14050 species:3702 "Arabi... 191 1.7e-12 1
TAIR|locus:2196583 - symbol:ECB2 "EARLY CHLOROPLAST BIOGE... 138 2.0e-12 3
TAIR|locus:2057574 - symbol:AT2G33760 species:3702 "Arabi... 172 2.3e-12 2
TAIR|locus:2080727 - symbol:MEF10 "mitochondrial RNA edit... 121 2.3e-12 3
TAIR|locus:2098901 - symbol:AT3G61170 species:3702 "Arabi... 122 4.2e-12 3
TAIR|locus:2083631 - symbol:AT3G15130 "AT3G15130" species... 124 4.9e-12 3
TAIR|locus:2825364 - symbol:AT1G71420 "AT1G71420" species... 141 1.1e-11 3
TAIR|locus:2079187 - symbol:AT3G47530 "AT3G47530" species... 184 1.1e-11 1
TAIR|locus:2040135 - symbol:MEF8 "AT2G25580" species:3702... 149 3.5e-11 3
TAIR|locus:2013079 - symbol:AT1G19720 "AT1G19720" species... 122 9.0e-10 3
TAIR|locus:2131631 - symbol:AT4G35130 "AT4G35130" species... 108 1.6e-08 2
TAIR|locus:2183886 - symbol:RARE1 "REQUIRED FOR ACCD RNA ... 107 8.2e-08 3
TAIR|locus:2102514 - symbol:AT3G56550 species:3702 "Arabi... 138 5.9e-07 2
TAIR|locus:2054131 - symbol:SLO2 "AT2G13600" species:3702... 125 8.8e-07 2
TAIR|locus:2159238 - symbol:AT5G61800 "AT5G61800" species... 115 2.5e-06 2
TAIR|locus:2141171 - symbol:AT4G21300 species:3702 "Arabi... 122 7.8e-06 3
TAIR|locus:2083961 - symbol:AT3G53360 "AT3G53360" species... 110 1.3e-05 2
TAIR|locus:2040859 - symbol:AT2G34370 species:3702 "Arabi... 115 3.5e-05 2
TAIR|locus:2175653 - symbol:AT5G39350 "AT5G39350" species... 118 3.8e-05 3
TAIR|locus:2013738 - symbol:AT1G29710 "AT1G29710" species... 101 5.1e-05 2
TAIR|locus:2195296 - symbol:AT1G09190 "AT1G09190" species... 113 6.3e-05 2
TAIR|locus:2007888 - symbol:AT1G17630 species:3702 "Arabi... 108 0.00013 2
TAIR|locus:2064828 - symbol:AT2G40720 species:3702 "Arabi... 107 0.00049 2
TAIR|locus:2019130 - symbol:OTP87 "organelle transcript p... 109 0.00084 2
>TAIR|locus:2154389 [details] [associations]
symbol:LPA66 "LOW PSII ACCUMULATION 66" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0007020
"microtubule nucleation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB017061
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY056318 IPI:IPI00541515
RefSeq:NP_199702.1 UniGene:At.26336 ProteinModelPortal:Q9FI80
SMR:Q9FI80 PaxDb:Q9FI80 PRIDE:Q9FI80 EnsemblPlants:AT5G48910.1
GeneID:834949 KEGG:ath:AT5G48910 GeneFarm:3360 TAIR:At5g48910
eggNOG:NOG255755 InParanoid:Q9FI80 OMA:LELWREM PhylomeDB:Q9FI80
ProtClustDB:CLSN2686787 Genevestigator:Q9FI80 Uniprot:Q9FI80
Length = 646
Score = 219 (82.2 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 42/98 (42%), Positives = 64/98 (65%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
IN L ++ +++ GY P T +VLL++EEE K+N+L+YH E++A FG+IST G IR
Sbjct: 539 INSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIR 598
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SK+ R++ VRD +RF HF
Sbjct: 599 IVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF-HHF 635
Score = 105 (42.0 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W LL ACR+ NVE+ ++VA++++ + P+++GAYV L N
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSN 485
Score = 50 (22.7 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQML 131
N +TA C G +EG ++F QM+
Sbjct: 380 NLLTA-CSHGGLVEEGRRYFSQMV 402
Score = 40 (19.1 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 22/106 (20%), Positives = 40/106 (37%)
Query: 89 FEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
+E+M+ +F+E + S+ C + G EG + G L S ++
Sbjct: 116 YEMMS-DEFVEPNRFTFP--SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRM 172
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
V + RV + EK DM++M + ++L N
Sbjct: 173 ----YVMCGFMKDARVLFYKNIIEK--DMVVMTDRRKRDGEIVLWN 212
>TAIR|locus:2103483 [details] [associations]
symbol:OTP84 "ORGANELLE TRANSCRIPT PROCESSING 84"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
EMBL:AL133248 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0031425 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BT008634
IPI:IPI00527739 PIR:T46179 RefSeq:NP_191302.2 UniGene:At.34834
ProteinModelPortal:Q7Y211 SMR:Q7Y211 EnsemblPlants:AT3G57430.1
GeneID:824910 KEGG:ath:AT3G57430 GeneFarm:3528 TAIR:At3g57430
eggNOG:NOG252051 InParanoid:Q7Y211 OMA:VAKNLRV PhylomeDB:Q7Y211
ProtClustDB:CLSN2680439 Genevestigator:Q7Y211 Uniprot:Q7Y211
Length = 890
Score = 225 (84.3 bits), Expect = 5.9e-28, Sum P(3) = 5.9e-28
Identities = 49/92 (53%), Positives = 63/92 (68%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L ERM +EGYVPDT VL +VEE++K+ +L H E+LA+ FGI++T GT IRV KN
Sbjct: 787 LETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKN 846
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
L K +SKIV RE+I+RD RRF R
Sbjct: 847 LRVCNDCHLATKFISKIVDREIILRDVRRFHR 878
Score = 96 (38.9 bits), Expect = 5.9e-28, Sum P(3) = 5.9e-28
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W +LL A R+H N+E+ E A ++ +EPN YV+L N
Sbjct: 690 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Score = 51 (23.0 bits), Expect = 5.9e-28, Sum P(3) = 5.9e-28
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 109 SITAGCGQNGPFDEGLKFF 127
S+ A C +G DEGL+ F
Sbjct: 623 SVFAACSHSGMVDEGLRIF 641
>TAIR|locus:2078653 [details] [associations]
symbol:AT3G02010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011664 EMBL:AC010797
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00527957 RefSeq:NP_186850.1 UniGene:At.53156
ProteinModelPortal:Q9S7F4 SMR:Q9S7F4 PRIDE:Q9S7F4
EnsemblPlants:AT3G02010.1 GeneID:821085 KEGG:ath:AT3G02010
GeneFarm:3358 TAIR:At3g02010 eggNOG:NOG280481 InParanoid:Q9S7F4
OMA:PAYSWVE PhylomeDB:Q9S7F4 ProtClustDB:CLSN2685183
Genevestigator:Q9S7F4 Uniprot:Q9S7F4
Length = 825
Score = 221 (82.9 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 46/94 (48%), Positives = 61/94 (64%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
+ +L +E+EGY PDT V+ DV+E+ K L YH ERLA+ F +ISTP+G I V+KN
Sbjct: 722 INELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKN 781
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + R K++SKIV RE+ VRD RF HF
Sbjct: 782 LRACRDCHAAIKLISKIVKREITVRDTSRF-HHF 814
Score = 93 (37.8 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEP-NNTGAYVILIN--------EALKDLLE 202
E +W ++L+ACR+H+N LAE+ A+ + +E + AYV + N E ++D+ +
Sbjct: 621 EIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680
Query: 203 RMEQEG 208
M + G
Sbjct: 681 AMRERG 686
Score = 57 (25.1 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRV 164
+S ++ +G Q G GLK F +M + ++A + F+ ++ A ++ + +LL ++
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS---FASLLLGKQL 474
Query: 165 H 165
H
Sbjct: 475 H 475
Score = 56 (24.8 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
+V E + D + D+ +S N + + Q ++ L FF +M R+ PF+ ++
Sbjct: 300 RVLETRMLFDEMPELDF-VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 147 HAGSTENVWLTLLSACRVHRNVELAEKVADMILMI 181
+ + +L ++H LA AD IL +
Sbjct: 359 SIAANLS---SLQMGRQLHCQALLA--TADSILHV 388
Score = 51 (23.0 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 82 SGSVRKVFEIMAVRDFLEYC-DYAISRNSITAGC-GQNGPFDEGLKFFGQM 130
SG V K ++ + RD + D + +I G +N FDE K F QM
Sbjct: 87 SGHV-KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Score = 40 (19.1 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 93 AVRDFLEYCDY-AISRNSITAGCGQNGPFDEGLKFFGQML 131
AV+ F E D A+S N++ + NG + + F +M+
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
>TAIR|locus:2151501 [details] [associations]
symbol:AT5G46460 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB019223 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533243 RefSeq:NP_199458.1
UniGene:At.29955 ProteinModelPortal:Q9FHF9 SMR:Q9FHF9
EnsemblPlants:AT5G46460.1 GeneID:834689 KEGG:ath:AT5G46460
GeneFarm:3435 TAIR:At5g46460 eggNOG:NOG266955 InParanoid:Q9FHF9
OMA:DEQKEEM PhylomeDB:Q9FHF9 ProtClustDB:CLSN2686182
Genevestigator:Q9FHF9 Uniprot:Q9FHF9
Length = 697
Score = 212 (79.7 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 43/98 (43%), Positives = 66/98 (67%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L E++++ GY PD + L DVE+EQK+ +L+YH ERLA+ FG+I+T +G+ +
Sbjct: 590 IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVT 649
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K++S +V RE+++RD RF HF
Sbjct: 650 VMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRF-HHF 686
Score = 109 (43.4 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 134 KIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI 193
K+K R++ E VWL LLSACR+H +V+ EK A I ++ ++ AYV+L
Sbjct: 479 KLKEAEELIERMV-VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLS 537
Query: 194 N 194
N
Sbjct: 538 N 538
Score = 61 (26.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
+S NSI GC Q+G FGQM+ + F+ ++ A S
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS 438
Score = 56 (24.8 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 78 RPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
R +R +F+ M VRD +S NS+ +GC + G + +K F +M
Sbjct: 78 RSNRLVDALNLFDEMPVRD-------VVSWNSMISGCVECGDMNTAVKLFDEM 123
Score = 55 (24.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
IS ++ G QN E L F ML IK+ PF+ ++ A
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITA 234
Score = 49 (22.3 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 81 RSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
RSG V ++F M V+D + NS+ G Q G D+ LK F QM
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAW-------NSMVHGYLQFGKVDDALKLFKQM 185
Score = 43 (20.2 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 93 AVRDFLEYCDYAI-SRNSITAGCGQNGPFDEGLKFFGQM 130
AV+ F E + ++ S ++ GC ++G D+ + F QM
Sbjct: 116 AVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQM 154
>TAIR|locus:2077878 [details] [associations]
symbol:AT3G08820 "AT3G08820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AC012562
PROSITE:PS51375 EMBL:AC010871 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00518512
RefSeq:NP_187494.1 UniGene:At.65071 ProteinModelPortal:Q9SR82
SMR:Q9SR82 PaxDb:Q9SR82 PRIDE:Q9SR82 EnsemblPlants:AT3G08820.1
GeneID:820029 KEGG:ath:AT3G08820 GeneFarm:3532 TAIR:At3g08820
eggNOG:NOG303126 InParanoid:Q9SR82 OMA:LIALEPW PhylomeDB:Q9SR82
ProtClustDB:CLSN2684962 Genevestigator:Q9SR82 Uniprot:Q9SR82
Length = 685
Score = 215 (80.7 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+DL M G+VP T+ V DVEEE+K+ +L YH E+LA+ G+IST G IRV+KN
Sbjct: 582 LEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKN 641
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
L K++SKI RE++VRDN RF
Sbjct: 642 LRVCGDCHEVMKLISKITRREIVVRDNNRF 671
Score = 91 (37.1 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW LLS CR+ ++ +LAE V ++ +EP N G YV L N
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Score = 56 (24.8 bits), Expect = 1.2e-25, Sum P(3) = 1.2e-25
Identities = 27/130 (20%), Positives = 52/130 (40%)
Query: 27 MDKANGITDRFEERAVSIGHYADLDGISDQLPSSSGGRQVDIHF-DGGVDGLRPSRSGSV 85
+D+ +T+ F A+ I YA ++ ++ DI + + GL +++G V
Sbjct: 339 IDRHEFLTNLFMANAL-IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL--AKNGHV 395
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
+ F + + L + + GC G +GL+FF I +A +
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA-----ISCVYALKRTV 450
Query: 146 MHAGSTENVW 155
H G ++W
Sbjct: 451 EHYGCMVDLW 460
Score = 45 (20.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
R VF+ M +D + + +++ G N EG++ F QML +K
Sbjct: 267 RSVFDSMVEKDIVTW-------STMIQGYASNSFPKEGIELFLQMLQENLK 310
>TAIR|locus:2125899 [details] [associations]
symbol:AT4G33170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161583 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035525 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529412 PIR:T05197 RefSeq:NP_195043.1 UniGene:At.65446
ProteinModelPortal:Q9SMZ2 SMR:Q9SMZ2 PRIDE:Q9SMZ2
EnsemblPlants:AT4G33170.1 GeneID:829454 KEGG:ath:AT4G33170
GeneFarm:3439 TAIR:At4g33170 eggNOG:NOG285302 InParanoid:Q9SMZ2
OMA:SGILDMY PhylomeDB:Q9SMZ2 ProtClustDB:CLSN2685477
Genevestigator:Q9SMZ2 Uniprot:Q9SMZ2
Length = 990
Score = 248 (92.4 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 50/121 (41%), Positives = 79/121 (65%)
Query: 168 VELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKN 227
+E+ K+ I +++ + + LI +KD++ ++QEGYVP+T L+DVEEE+K+
Sbjct: 861 IEVKNKIH--IFVVD-DRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKER 917
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
LYYH E+LA+ FG++STP T IRVIKNL + K ++K+ +RE+++RD RF
Sbjct: 918 ALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFH 977
Query: 288 R 288
R
Sbjct: 978 R 978
Score = 81 (33.6 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G R VF+ M+ RD IS NS+ AG QNG E + F Q+L +K
Sbjct: 367 GFARTVFDNMSERDL-------ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 143 SRIMHAGSTENVWLTLLSACRVH 165
+ ++ A S+ L+L VH
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVH 442
Score = 50 (22.7 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
N++ G Q+G E L+ F QM IK F ++ A S
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 44 (20.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACR- 163
++ ++ +GC +NG + F QM + + + + A S LT L R
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC----LTALEQGRQ 639
Query: 164 VHRN 167
+H N
Sbjct: 640 IHAN 643
>TAIR|locus:2038603 [details] [associations]
symbol:AT2G27610 "AT2G27610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006232 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00547006 PIR:G84674
RefSeq:NP_180329.1 UniGene:At.13265 UniGene:At.66363
ProteinModelPortal:Q9ZUW3 SMR:Q9ZUW3 PRIDE:Q9ZUW3
EnsemblPlants:AT2G27610.1 GeneID:817307 KEGG:ath:AT2G27610
GeneFarm:3453 TAIR:At2g27610 eggNOG:NOG320969 InParanoid:Q9ZUW3
OMA:IVAWSAM PhylomeDB:Q9ZUW3 ProtClustDB:CLSN2683516
Genevestigator:Q9ZUW3 Uniprot:Q9ZUW3
Length = 868
Score = 207 (77.9 bits), Expect = 5.0e-25, Sum P(3) = 5.0e-25
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+DL R++ GY PDT VL D+++E K+ +L H ERLA+ FG+I+TP G+ + +IKN
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 823
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K+++KI RE++VRD+ RF HF
Sbjct: 824 LRVCGDCHLVIKLIAKIEEREIVVRDSNRF-HHF 856
Score = 117 (46.2 bits), Expect = 5.0e-25, Sum P(3) = 5.0e-25
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
AGST +W T+L+ACRVH+ EL A+ I+ ++P ++ AYV+L N
Sbjct: 662 AGST--IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706
Score = 53 (23.7 bits), Expect = 5.0e-25, Sum P(3) = 5.0e-25
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE 152
+S NS+ +G Q+G + L F +M K+K F + HAG E
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVE 613
Score = 46 (21.3 bits), Expect = 2.7e-24, Sum P(3) = 2.7e-24
Identities = 19/93 (20%), Positives = 38/93 (40%)
Query: 62 GGRQVDIH---FDGGVDGLRPSRSGSVR---KVFEIMAVRDFLEYCDY--AISRNSITAG 113
GGR + +H G+D P + + K + R + + ++ NS+ +G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 114 CGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
NG E L F M + ++ + F+ ++
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Score = 38 (18.4 bits), Expect = 1.8e-23, Sum P(3) = 1.8e-23
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML 131
+ A C G +EG K+F M+
Sbjct: 602 VFAACTHAGLVEEGEKYFDIMV 623
>TAIR|locus:2118964 [details] [associations]
symbol:EMB2758 "embryo defective 2758" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL031032 EMBL:AL161584 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237570 IPI:IPI00530295 PIR:T05227 RefSeq:NP_567948.1
UniGene:At.65452 ProteinModelPortal:O81767 SMR:O81767 PaxDb:O81767
PRIDE:O81767 EnsemblPlants:AT4G33990.1 GeneID:829546
KEGG:ath:AT4G33990 GeneFarm:3205 TAIR:At4g33990 eggNOG:NOG269748
InParanoid:O81767 OMA:GWSSMEV PhylomeDB:O81767
ProtClustDB:CLSN2917663 Genevestigator:O81767 Uniprot:O81767
Length = 823
Score = 210 (79.0 bits), Expect = 6.6e-25, Sum P(3) = 6.6e-25
Identities = 45/94 (47%), Positives = 61/94 (64%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L +++ GYVPD + VL DVE+++K++IL H ERLA+ F +I+TP TTIR+ KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SKI RE+IVRD+ RF HF
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRF-HHF 812
Score = 104 (41.7 bits), Expect = 6.6e-25, Sum P(3) = 6.6e-25
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F + M ++W LLSACRVH NV+L + ++ + +EP + G +V+L N
Sbjct: 610 FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 662
Score = 57 (25.1 bits), Expect = 6.6e-25, Sum P(3) = 6.6e-25
Identities = 33/128 (25%), Positives = 57/128 (44%)
Query: 12 ENVELSNGLAGCNEF--MDKANGITDRFE-ERAVSIGHYADLDGISDQLPSSSGGRQVDI 68
E + LSNGL + + + T+ + R V+I Y+ G+ +L S+ + +D+
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN--KLIDL 291
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
+ + G R +KVF+ M VRD IS NSI N + F
Sbjct: 292 YAEFG-------RLRDCQKVFDRMYVRDL-------ISWNSIIKAYELNEQPLRAISLFQ 337
Query: 129 QMLMAKIK 136
+M +++I+
Sbjct: 338 EMRLSRIQ 345
Score = 48 (22.0 bits), Expect = 5.6e-24, Sum P(3) = 5.6e-24
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 93 AVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
AV ++L D IS N+I +G QNG E ++ + M
Sbjct: 405 AVFNWLPNTD-VISWNTIISGYAQNGFASEAIEMYNIM 441
Score = 47 (21.6 bits), Expect = 7.1e-24, Sum P(3) = 7.1e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML 131
S+ C Q G +G+K G++L
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLL 478
Score = 45 (20.9 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
N++ A G +G ++ + F +ML +K H F ++ A S
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
Score = 39 (18.8 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM 130
AV F E D + + IT + C +G DEG F M
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 578
>TAIR|locus:2140235 [details] [associations]
symbol:AT4G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161495 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC004044 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00548792 PIR:A85035
RefSeq:NP_192184.1 UniGene:At.50610 ProteinModelPortal:Q9SY02
SMR:Q9SY02 PRIDE:Q9SY02 EnsemblPlants:AT4G02750.1 GeneID:828187
KEGG:ath:AT4G02750 GeneFarm:3233 TAIR:At4g02750 eggNOG:NOG280862
InParanoid:Q9SY02 OMA:MYVLLSN PhylomeDB:Q9SY02
ProtClustDB:CLSN2685776 Genevestigator:Q9SY02 Uniprot:Q9SY02
Length = 781
Score = 195 (73.7 bits), Expect = 8.8e-25, Sum P(3) = 8.8e-25
Identities = 43/94 (45%), Positives = 60/94 (63%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L++L RM++ GYV T VL DVEEE+K+ ++ YH ERLA+ +GI+ G IRVIKN
Sbjct: 678 LEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKN 737
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K +++I R +I+RDN RF HF
Sbjct: 738 LRVCEDCHNAIKYMARITGRLIILRDNNRF-HHF 770
Score = 122 (48.0 bits), Expect = 8.8e-25, Sum P(3) = 8.8e-25
Identities = 24/41 (58%), Positives = 28/41 (68%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W TLL A RVH N ELAE AD I +EP N+G YV+L N
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620
Score = 65 (27.9 bits), Expect = 8.8e-25, Sum P(3) = 8.8e-25
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
+R G R++FEIM RD C + N++ +G QNG D+ F +M
Sbjct: 137 VRNRNLGKARELFEIMPERDV---CSW----NTMLSGYAQNGCVDDARSVFDRM 183
Score = 54 (24.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQ 129
R+ F+ M VRD +S N+I G Q+G DE + F +
Sbjct: 239 RQFFDSMNVRD-------VVSWNTIITGYAQSGKIDEARQLFDE 275
Score = 48 (22.0 bits), Expect = 5.0e-23, Sum P(3) = 5.0e-23
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 62 GGRQVDIHFDGGVDGLRPSRSGSVRK---VFEIMAVRDFLEYCDYAISRNSITAGCGQNG 118
GG + F G L + GS+ + +F+ MA +D +S N++ AG ++G
Sbjct: 438 GGYETGC-FVGNALLLMYCKCGSIEEANDLFKEMAGKDI-------VSWNTMIAGYSRHG 489
Query: 119 PFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
+ L+FF M +K A ++ A S
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Score = 45 (20.9 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM 130
++S N + +G +NG F+ K F +M
Sbjct: 95 SVSYNGMISGYLRNGEFELARKLFDEM 121
Score = 43 (20.2 bits), Expect = 1.6e-23, Sum P(4) = 1.6e-23
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 64 RQVDIHFDGGVDG-LRPSRSGSVRKVFEIMAVRDFLEY 100
R + ++G + G LR RK+F+ M RD + +
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Score = 40 (19.1 bits), Expect = 1.6e-23, Sum P(4) = 1.6e-23
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM 130
+S ++ AG Q+G E L+ F QM
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQM 400
Score = 37 (18.1 bits), Expect = 3.3e-23, Sum P(4) = 3.3e-23
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
++ + C G D+G ++F M
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTM 536
>TAIR|locus:2115130 [details] [associations]
symbol:AT4G37170 "AT4G37170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z99707 EMBL:AL161590 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00546419 PIR:B85439
RefSeq:NP_195434.1 UniGene:At.65464 ProteinModelPortal:O23169
SMR:O23169 PRIDE:O23169 EnsemblPlants:AT4G37170.1 GeneID:829871
KEGG:ath:AT4G37170 GeneFarm:3146 TAIR:At4g37170 eggNOG:NOG313360
InParanoid:O23169 OMA:QNGQPDE PhylomeDB:O23169
ProtClustDB:CLSN2685770 Genevestigator:O23169 Uniprot:O23169
Length = 691
Score = 218 (81.8 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 46/94 (48%), Positives = 63/94 (67%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L++L ++M++EGYVP T VL DVE+EQK+ L YH E+LA+ F I+ST +GT I+
Sbjct: 584 IVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIK 643
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V KNL S K +S I R++ VRD+ RF
Sbjct: 644 VFKNLRSCVDCHGAIKFISNITKRKITVRDSTRF 677
Score = 91 (37.1 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 23/66 (34%), Positives = 30/66 (45%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTENVWLTLLS 160
+S S+ GC QNG DE LK+F +L + K H F ++ HAG E S
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 161 ACRVHR 166
HR
Sbjct: 446 ITEKHR 451
>TAIR|locus:2091546 [details] [associations]
symbol:AT3G13770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP001307 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00518949 RefSeq:NP_187990.1
UniGene:At.43032 UniGene:At.53299 ProteinModelPortal:Q9LIC3
SMR:Q9LIC3 EnsemblPlants:AT3G13770.1 GeneID:820586
KEGG:ath:AT3G13770 GeneFarm:3533 TAIR:At3g13770 eggNOG:NOG263023
InParanoid:Q9LIC3 OMA:NEFTFAT PhylomeDB:Q9LIC3
ProtClustDB:CLSN2684809 Genevestigator:Q9LIC3 Uniprot:Q9LIC3
Length = 628
Score = 203 (76.5 bits), Expect = 7.3e-24, Sum P(3) = 7.3e-24
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
+K++ +M+Q GYVPD VL DV+EEQK+ +L H E+LAL FG+I+T +G IRV KN
Sbjct: 525 MKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKN 584
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
L + K+ SK+ RE+ +RD RF
Sbjct: 585 LRICVDCHNFAKIFSKVFEREVSLRDKNRF 614
Score = 109 (43.4 bits), Expect = 7.3e-24, Sum P(3) = 7.3e-24
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F + M + T V +LL ACRVH +V++ E V ++ IEP N G YVIL N
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSN 467
Score = 51 (23.0 bits), Expect = 7.3e-24, Sum P(3) = 7.3e-24
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 80 SRSGSVRKVFEIMAV-RDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQML 131
S+ G R+V E+ + RD A++ ++ +GC D GL F M+
Sbjct: 331 SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Score = 39 (18.8 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
RKV + M ++ + + ISR S Q G E L F +M+ + K F+ +
Sbjct: 107 RKVLDEMPEKNVVSWTAM-ISRYS------QTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 146 M 146
+
Sbjct: 160 L 160
Score = 37 (18.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEAL 197
R + T V T+L ++ N L E + +M ++ Y L+N L
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACL 63
>TAIR|locus:2148101 [details] [associations]
symbol:AT5G16860 "AT5G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AL391141
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00533068 PIR:T51541
RefSeq:NP_197188.1 UniGene:At.54872 ProteinModelPortal:Q9LFL5
SMR:Q9LFL5 EnsemblPlants:AT5G16860.1 GeneID:831549
KEGG:ath:AT5G16860 GeneFarm:3540 TAIR:At5g16860 eggNOG:NOG251129
InParanoid:Q9LFL5 OMA:FTISCAL PhylomeDB:Q9LFL5
ProtClustDB:CLSN2686178 Genevestigator:Q9LFL5 Uniprot:Q9LFL5
Length = 850
Score = 196 (74.1 bits), Expect = 8.2e-23, Sum P(3) = 8.2e-23
Identities = 39/98 (39%), Positives = 63/98 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L D ++R++ GYVP+T L DV++E+K ++L+ H E+LAL +GI++TP G IR
Sbjct: 743 IYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIR 802
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL +S+I+ ++I+RD+ RF HF
Sbjct: 803 ITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF-HHF 839
Score = 99 (39.9 bits), Expect = 8.2e-23, Sum P(3) = 8.2e-23
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW+ LS CR+H VEL E A+ I + N+ G+Y +L N
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Score = 69 (29.3 bits), Expect = 8.2e-23, Sum P(3) = 8.2e-23
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMH 147
VF M+V+D +S N++ AG Q G F++ ++ F +M KIK +S +
Sbjct: 286 VFSNMSVKD-------VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 148 AGSTENVWLTLLSACR 163
+ + L CR
Sbjct: 339 GYAQRGLGYEALGVCR 354
Score = 46 (21.3 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 114 CGQNGPFDEGLKFFGQM 130
C +G D+G+++F +M
Sbjct: 589 CSHSGMIDQGMEYFNRM 605
Score = 38 (18.4 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
RKVF+ M+V D +S NSI + G L+ F +M
Sbjct: 182 RKVFDEMSVWD-------VVSWNSIIESYAKLGKPKVALEMFSRM 219
Score = 37 (18.1 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQM 130
NS+ G NG ++ L FG M
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLM 118
>TAIR|locus:2198546 [details] [associations]
symbol:AT1G20230 "AT1G20230" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022472 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00518181 PIR:A86336 RefSeq:NP_173449.1 UniGene:At.41719
ProteinModelPortal:Q9LNU6 SMR:Q9LNU6 PRIDE:Q9LNU6
EnsemblPlants:AT1G20230.1 GeneID:838612 KEGG:ath:AT1G20230
GeneFarm:3206 TAIR:At1g20230 eggNOG:NOG298463 InParanoid:Q9LNU6
OMA:CHAVIKF PhylomeDB:Q9LNU6 ProtClustDB:CLSN2682959
Genevestigator:Q9LNU6 Uniprot:Q9LNU6
Length = 760
Score = 189 (71.6 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 40/99 (40%), Positives = 64/99 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E + ++ + M + G+ P+ L DVEE++++ +L+ H E+LA+VFG+++TPDGT ++
Sbjct: 653 ITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQ 712
Query: 253 VIKNLPSLRGLRHGN-KVVSKIVHREMIVRDNRRFCRHF 290
VIKNL + G H K +S RE+ +RD RF HF
Sbjct: 713 VIKNL-RICGDCHAVIKFISSYAGREIFIRDTNRF-HHF 749
Score = 109 (43.4 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW LL++CR+ NV+LAE A+ + +EP N G YV+L N
Sbjct: 559 VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599
Score = 89 (36.4 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 37/112 (33%), Positives = 52/112 (46%)
Query: 74 VDGLRPSRSGSVRKVFEIMAVRDFLEYCDY--AISRNSITAGCGQNGPFDEGLKFFGQML 131
+ GL SR+G V K E+ + F E +S SI AGC QNG E L+ F +M
Sbjct: 325 ITGL--SRNGLVDKALEMFEL--FKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 132 MAKIKARHAPFSRIMHA-GSTENVW---LTLLSACRVHR--NVELAEKVADM 177
+A +K H ++ A G+ + T A RVH NV + + DM
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Score = 65 (27.9 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
++ V +FE + +R L+ D+ IS S+ + CGQ G DEG K+F M
Sbjct: 469 KAKEVMSIFESL-MRTRLKP-DF-ISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 49 (22.3 bits), Expect = 6.4e-21, Sum P(3) = 6.4e-21
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
+R R G RKVF+ M+ +D + C +++ + G +E ++ +M + I+
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVT-C------SALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 137 ARHAPFSRIM 146
A ++ I+
Sbjct: 215 ANIVSWNGIL 224
Score = 47 (21.6 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA----GSTENVW 155
NS+ G +G E + F ++ ++K F+ ++ A G T+ W
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Score = 42 (19.8 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G V+ I+++ + E + + IT G +NG D+ L+ F ++ +
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAGVCNAYIT-GLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 143 SRIMHAGSTEN 153
+ I+ AG +N
Sbjct: 357 TSII-AGCAQN 366
Score = 37 (18.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFF 127
+R G + +V I++ + +S N I +G ++G E + F
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
>TAIR|locus:4010713776 [details] [associations]
symbol:AT3G26782 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB016889 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK228506 IPI:IPI00852362
RefSeq:NP_001078212.1 UniGene:At.71198 ProteinModelPortal:Q9LW32
SMR:Q9LW32 EnsemblPlants:AT3G26782.1 GeneID:5008030
KEGG:ath:AT3G26782 GeneFarm:3356 TAIR:At3g26782 eggNOG:NOG324646
OMA:TSIIDMY PhylomeDB:Q9LW32 ProtClustDB:CLSN2696675
Genevestigator:Q9LW32 Uniprot:Q9LW32
Length = 659
Score = 201 (75.8 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 43/98 (43%), Positives = 63/98 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L +L ++ + GYV +T V DV+EE+K+ L H E+LA+ FGI++T G+T+
Sbjct: 552 IYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVN 611
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL + K++SKIV RE +VRD +RF HF
Sbjct: 612 VVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRF-HHF 648
Score = 100 (40.3 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
+W +LL+ACR+H+NVELAE + ++ +N G Y++L
Sbjct: 458 IWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Score = 51 (23.0 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 60 SSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGP 119
S G +D + GG G+ +R K+F+ + +D + Y NSI + Q+G
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVAR-----KIFDQIVDKDRVSY-------NSIMSVYAQSGM 266
Query: 120 FDEGLKFFGQMLMAKI 135
+E + F +++ K+
Sbjct: 267 SNEAFEVFRRLVKNKV 282
Score = 38 (18.4 bits), Expect = 4.2e-21, Sum P(3) = 4.2e-21
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
S+ A C G EG ++F M
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAM 414
Score = 37 (18.1 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 97 FLEYCDYA--ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGST 151
F Y D S NS+ A ++G E L F M + + F + A S+
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
>TAIR|locus:2102852 [details] [associations]
symbol:CRR2 "AT3G46790" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISS] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0031426
"polycistronic mRNA processing" evidence=IMP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AL096859 GO:GO:0031425 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AK226825 IPI:IPI00546099 PIR:T12969
RefSeq:NP_190263.1 UniGene:At.3629 ProteinModelPortal:Q9STF3
SMR:Q9STF3 STRING:Q9STF3 PRIDE:Q9STF3 EnsemblPlants:AT3G46790.1
GeneID:823832 KEGG:ath:AT3G46790 GeneFarm:3440 TAIR:At3g46790
eggNOG:NOG277232 InParanoid:Q9STF3 OMA:WSAMIAC PhylomeDB:Q9STF3
ProtClustDB:CLSN2685130 Genevestigator:Q9STF3 GO:GO:0031426
Uniprot:Q9STF3
Length = 657
Score = 195 (73.7 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 41/96 (42%), Positives = 60/96 (62%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L L E M+++GY+P TK VL ++E E+K+ I+ H E+LAL FG+I+T G IR
Sbjct: 550 IHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIR 609
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K +SK + +E++VRD RF R
Sbjct: 610 ITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHR 645
Score = 114 (45.2 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
VW +LL +CR+H NVELAE+ + + +EP N G YV+L
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Score = 43 (20.2 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
++VF+ M RD +S NS+ + G +G + ++ F +ML F +
Sbjct: 340 QRVFDRMHDRD-------VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 146 MHAGSTENV 154
+ A S E +
Sbjct: 393 LGACSHEGL 401
Score = 38 (18.4 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
S+ C G +EG + F M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETM 412
>TAIR|locus:2055919 [details] [associations]
symbol:AT2G22070 "AT2G22070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR019734 Pfam:PF13176
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC007232 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00546911
PIR:F84608 RefSeq:NP_179798.1 UniGene:At.39486
ProteinModelPortal:Q9SHZ8 SMR:Q9SHZ8 EnsemblPlants:AT2G22070.1
GeneID:816742 KEGG:ath:AT2G22070 GeneFarm:3362 TAIR:At2g22070
eggNOG:NOG294209 InParanoid:Q9SHZ8 OMA:SHYACMV PhylomeDB:Q9SHZ8
ProtClustDB:CLSN2683727 Genevestigator:Q9SHZ8 Uniprot:Q9SHZ8
Length = 786
Score = 234 (87.4 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 47/94 (50%), Positives = 65/94 (69%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
+K + + +++ GYVPDT VL D+EEE K+ IL +H E+LA+ FG+ISTPD TT+R++KN
Sbjct: 683 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 742
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SK+V RE+IVRD RF HF
Sbjct: 743 LRVCNDCHTAIKFISKLVGREIIVRDTTRF-HHF 775
Score = 125 (49.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTK 214
W +LLSACRVH+N++L + A+ +L++EP N+GAY L N L + E+ + +
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN--LYSACGKWEEAAKI---R 640
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
+ + D ++++ + + VFG+ DGT
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHVFGV---EDGT 672
Score = 58 (25.5 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 93 AVRDF-LEYCDY-AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAP----FSRIM 146
A R F L C+ +S S+ Q+G +E L+ F MLM ++ H FS
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 147 HAG 149
HAG
Sbjct: 527 HAG 529
Score = 45 (20.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
RK+F+ M +R A S N++ + + G D +FF Q+
Sbjct: 69 RKLFDEMPLRT-------AFSWNTVLSAYSKRGDMDSTCEFFDQL 106
Score = 43 (20.2 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 89 FEIMAVRDFLEYCDYAISRNSITAGCGQNGPFD-EGLKFFGQML 131
FE MA RD + + NS+ +G Q G +D L F +ML
Sbjct: 235 FEQMAERDIVTW-------NSMISGFNQRG-YDLRALDIFSKML 270
Score = 37 (18.1 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 18/92 (19%), Positives = 37/92 (40%)
Query: 44 IGHYADLDGISD--QLPSSSGGRQVDIH-FDGGVDG-LRPSRSGSVRKVFEIMAVRDFLE 99
I Y+ G+ +L G + + I F +DG ++ + +F + RD +
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQML 131
+ ++ G Q+G + E + F M+
Sbjct: 381 W-------TAMIVGYEQHGSYGEAINLFRSMV 405
>TAIR|locus:2131939 [details] [associations]
symbol:MEF29 "AT4G30700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000963
"mitochondrial RNA processing" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161577 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0000963 Pfam:PF13041 HOGENOM:HOG000237570
GO:GO:0080156 EMBL:AL109787 EMBL:BX828159 EMBL:AJ006042
IPI:IPI00535639 PIR:C85359 PIR:T52645 RefSeq:NP_194799.1
UniGene:At.65435 ProteinModelPortal:Q9SUH6 SMR:Q9SUH6 PaxDb:Q9SUH6
PRIDE:Q9SUH6 EnsemblPlants:AT4G30700.1 GeneID:829193
KEGG:ath:AT4G30700 GeneFarm:3164 TAIR:At4g30700 eggNOG:NOG256068
InParanoid:Q9SUH6 OMA:MVKVHSE PhylomeDB:Q9SUH6
ProtClustDB:CLSN2685640 Genevestigator:Q9SUH6 Uniprot:Q9SUH6
Length = 792
Score = 202 (76.2 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 44/98 (44%), Positives = 62/98 (63%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L +M + GY P+T+ L DVEEE+++ ++ H ERLA+ FG+I+T GT IR
Sbjct: 685 IYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIR 744
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K++SKI R ++VRD RF HF
Sbjct: 745 IIKNLRVCLDCHTVTKLISKITERVIVVRDANRF-HHF 781
Score = 114 (45.2 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 120 FDEGLKFFGQMLMAKIKARHAPFS-RIMHAGSTE---NVWLTLLSACRVHRNVELAEKVA 175
F+ +K + M+ +A H + + + A S E +VW TLL ACR+H++ LA V+
Sbjct: 553 FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVS 612
Query: 176 DMILMIEPNNTGAYVILIN 194
+ + ++P+N G +V+L N
Sbjct: 613 EKLFELDPDNVGYHVLLSN 631
Score = 55 (24.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++ GS+ R++F++M ++ ++ N++ +G G +G E L F +ML + I
Sbjct: 466 AKCGSIAEARRLFDLMTKKN-------EVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 137 ARHAPFSRIMHAGS 150
F +++A S
Sbjct: 519 PTPVTFLCVLYACS 532
Score = 37 (18.1 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 7/34 (20%), Positives = 18/34 (52%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKAR 138
++ N++ G NG + L F +++++ + R
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
>TAIR|locus:2144143 [details] [associations]
symbol:AT5G06540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AP002543 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 HOGENOM:HOG000237569
IPI:IPI00525372 RefSeq:NP_196272.1 UniGene:At.65494
ProteinModelPortal:Q9FG16 SMR:Q9FG16 PRIDE:Q9FG16
EnsemblPlants:AT5G06540.1 GeneID:830542 KEGG:ath:AT5G06540
GeneFarm:3536 TAIR:At5g06540 eggNOG:NOG262142 InParanoid:Q9FG16
OMA:SIMINGY PhylomeDB:Q9FG16 ProtClustDB:CLSN2686880
ArrayExpress:Q9FG16 Genevestigator:Q9FG16 Uniprot:Q9FG16
Length = 622
Score = 187 (70.9 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I +++L ++ GY +T + DV+EE+K++ ++ H E+LA+ +G++ T GTTIR
Sbjct: 515 IRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIR 574
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++S++ RE+IVRD RF HF
Sbjct: 575 IVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRF-HHF 611
Score = 108 (43.1 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
MH + LL AC++++N E+AE+V +M++ ++P ++G YV+L N
Sbjct: 412 MHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSN 460
Score = 53 (23.7 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHA 140
R G + K + + L D ++S +SI G +G + + +F QM+ R
Sbjct: 296 RCGDIEKAIHVF---EGLPETD-SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 141 PFSRIMHAGS 150
F+ ++ A S
Sbjct: 352 TFTAVLSACS 361
Score = 40 (19.1 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 13/67 (19%), Positives = 25/67 (37%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G K + L + ++ ++ + C G ++GL+ + M K H
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM-----KKDHGIE 383
Query: 143 SRIMHAG 149
R+ H G
Sbjct: 384 PRLEHYG 390
>TAIR|locus:2154855 [details] [associations]
symbol:AT5G66520 "AT5G66520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00529723
RefSeq:NP_201453.1 UniGene:At.55714 ProteinModelPortal:Q9FJY7
SMR:Q9FJY7 EnsemblPlants:AT5G66520.1 GeneID:836784
KEGG:ath:AT5G66520 GeneFarm:3455 TAIR:At5g66520 eggNOG:NOG260190
InParanoid:Q9FJY7 OMA:PHNAYTF PhylomeDB:Q9FJY7
ProtClustDB:CLSN2686844 Genevestigator:Q9FJY7 Uniprot:Q9FJY7
Length = 620
Score = 197 (74.4 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 36/89 (40%), Positives = 63/89 (70%)
Query: 203 RMEQEGYVPDTKEVLLD-VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLR 261
++E+ GYVP+ +E+LLD V++++++ I++ H E+LA+ +G+I T GT IR++KNL +
Sbjct: 522 KLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCK 581
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K++SKI R++++RD RF HF
Sbjct: 582 DCHKVTKLISKIYKRDIVMRDRTRF-HHF 609
Score = 108 (43.1 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV 190
+W LL ACR+H+N+EL E++ ++++ I+P + G YV
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYV 454
Score = 37 (18.1 bits), Expect = 2.8e-21, Sum P(3) = 2.8e-21
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 12 ENVELSNGLAGC 23
+NV L+N L+ C
Sbjct: 246 DNVSLANALSAC 257
>TAIR|locus:2096414 [details] [associations]
symbol:AT3G03580 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009327 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BT004278 EMBL:BT006153 IPI:IPI00535817 RefSeq:NP_187008.1
UniGene:At.40958 ProteinModelPortal:Q9SS60 SMR:Q9SS60 PaxDb:Q9SS60
PRIDE:Q9SS60 EnsemblPlants:AT3G03580.1 GeneID:821229
KEGG:ath:AT3G03580 GeneFarm:3232 TAIR:At3g03580 eggNOG:NOG261100
InParanoid:Q9SS60 OMA:YTFPSVI PhylomeDB:Q9SS60
ProtClustDB:CLSN2684094 Genevestigator:Q9SS60 Uniprot:Q9SS60
Length = 882
Score = 198 (74.8 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 41/95 (43%), Positives = 64/95 (67%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGIISTPDGTTI 251
I ++L+ L M +EGY+PD +EV ++EEE+ K+ ++ H ERLA+ FG+++T GT +
Sbjct: 774 IYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPL 833
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+V+KNL K++SKIV RE++VRD RF
Sbjct: 834 QVMKNLRVCGDCHEVTKLISKIVGREILVRDANRF 868
Score = 82 (33.9 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA 196
F + M ++W ++L ACR ++E AE+V+ I+ + P++ G Y IL + A
Sbjct: 668 FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG-YSILASNA 721
Score = 66 (28.3 bits), Expect = 5.0e-21, Sum P(3) = 5.0e-21
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 87 KVFEIMAVRDFLEY--CDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
K +++ RD C +S NSI +G Q+G E +K F M++ + +A H +
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Score = 62 (26.9 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
NSI +NG F E L+F+G++ +K+ F ++ A
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA 115
Score = 57 (25.1 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
R+VF+ M VRD +S NS+ +G +G ++E L+ + ++
Sbjct: 161 RQVFDEMPVRDL-------VSWNSLISGYSSHGYYEEALEIYHEL 198
Score = 45 (20.9 bits), Expect = 7.1e-19, Sum P(3) = 7.1e-19
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G K+F M D ++ N++ + C + G F GL+ QM +++ A F
Sbjct: 460 GDSLKIFSSMGTGD-------TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Score = 43 (20.2 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEY 100
L+ R R+VF+ M VRD + Y
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSY 276
Score = 42 (19.8 bits), Expect = 6.7e-20, Sum P(4) = 6.7e-20
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
+I C +G DEGL F +M
Sbjct: 615 AIIYACSHSGLVDEGLACFEKM 636
>TAIR|locus:2019160 [details] [associations]
symbol:AT1G74630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK220733
EMBL:AK220737 IPI:IPI00540769 PIR:D96775 RefSeq:NP_177601.1
UniGene:At.34855 UniGene:At.70345 ProteinModelPortal:Q9CA54
SMR:Q9CA54 PRIDE:Q9CA54 EnsemblPlants:AT1G74630.1 GeneID:843802
KEGG:ath:AT1G74630 GeneFarm:3465 TAIR:At1g74630 eggNOG:NOG304289
HOGENOM:HOG000237569 InParanoid:Q9CA54 OMA:KVFDEMH PhylomeDB:Q9CA54
ProtClustDB:CLSN2682262 Genevestigator:Q9CA54 Uniprot:Q9CA54
Length = 643
Score = 176 (67.0 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 37/94 (39%), Positives = 56/94 (59%)
Query: 194 NEALKDLLERMEQE-GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+E LK+++ R++ E GY P+ L DVEEE+K++ + H E+LAL F + G IR
Sbjct: 536 HEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIR 595
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL R K+ SK+ E++VRD RF
Sbjct: 596 IVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRF 629
Score = 111 (44.1 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
T VW TLL AC H N+ELAE+V + ++PNN+G V+L N
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSN 481
Score = 56 (24.8 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
SR G+V R VFE M + C +S S+ AG +G +E ++ F +M +
Sbjct: 315 SRCGNVPMARLVFEGMQEKR----C--IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 368
Query: 137 ARHAPFSRIMHAGS 150
F ++HA S
Sbjct: 369 PDGISFISLLHACS 382
Score = 53 (23.7 bits), Expect = 5.4e-20, Sum P(3) = 5.4e-20
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S +++F M RD D +S +++ G NG F+E +F ++ A + +
Sbjct: 221 SAKRIFSEMPHRD-----D--VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 144 RIMHAGS 150
++ A S
Sbjct: 274 GVLSACS 280
Score = 46 (21.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRV 164
+S + + C Q+G F+ FG++L ++ A +S I+ S N + + S C
Sbjct: 270 VSLTGVLSACSQSGSFE-----FGKILHGFVEK--AGYSWIV---SVNNALIDMYSRCG- 318
Query: 165 HRNVELAEKV 174
NV +A V
Sbjct: 319 --NVPMARLV 326
Score = 44 (20.5 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 93 AVRDFLEYCDYAISRNSITA-----GCGQNGPFDEGLKFFGQM 130
AVR F E Y ++ + I+ C G +EG +F +M
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 397
Score = 37 (18.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
W +++AC +V A ++ D +L+ N+T V+L
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLV--RNHTSWNVML 210
>TAIR|locus:2012295 [details] [associations]
symbol:AT1G09410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 EMBL:AC003970 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 UniGene:At.70699 Pfam:PF12854
HOGENOM:HOG000237570 EMBL:DQ446238 EMBL:AK221693 IPI:IPI00525858
IPI:IPI00570432 PIR:D86227 RefSeq:NP_172412.1 UniGene:At.63945
ProteinModelPortal:Q56XI1 SMR:Q56XI1 PRIDE:Q56XI1
EnsemblPlants:AT1G09410.1 GeneID:837463 KEGG:ath:AT1G09410
GeneFarm:3184 TAIR:At1g09410 eggNOG:NOG252899 InParanoid:O80524
OMA:NEAMEMI PhylomeDB:Q56XI1 Genevestigator:Q56XI1 Uniprot:Q56XI1
Length = 705
Score = 182 (69.1 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 40/98 (40%), Positives = 57/98 (58%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L +L + + GY PD L DV+EE+K N L YH ERLA+ + ++ +G IR
Sbjct: 598 ILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIR 657
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K++SK+ RE+I+RD RF HF
Sbjct: 658 VMKNLRVCSDCHTAIKIISKVKEREIILRDANRF-HHF 694
Score = 107 (42.7 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW +LL ACR H +++AE A ++ IEP N+G Y++L N
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN 543
Score = 53 (23.7 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
RK+F+ M R+ IS N + +G +NG DE K F M + + A
Sbjct: 68 RKLFDEMPDRNI-------ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGY 120
Query: 146 MHAGSTE 152
+H G +
Sbjct: 121 VHNGKVD 127
Score = 51 (23.0 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 27/128 (21%), Positives = 55/128 (42%)
Query: 12 ENVELSNGLAG-CNEF-MDKANGITDRFEERAV-----SIGHYADLDGISDQLPSSSG-G 63
+N+ ++ + G C E +D+A I D ER+V + Y + + D
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 64 RQVDIHFDGGVDG-LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDE 122
+ ++ + + G ++ R ++FE+M V+ + C N++ +G GQ G +
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA-C------NAMISGLGQKGEIAK 283
Query: 123 GLKFFGQM 130
+ F M
Sbjct: 284 ARRVFDSM 291
Score = 48 (22.0 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQM-LMAKIKARHAPFSRIMHAGS 150
NSI +G +G +E LK F +M L K F + A S
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Score = 38 (18.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 112 AGCGQNGPFDEGLKFFGQM 130
+ C G +EGLK + M
Sbjct: 441 SACSYAGMVEEGLKIYESM 459
>TAIR|locus:2081635 [details] [associations]
symbol:AT3G62890 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL162651 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK175128 IPI:IPI00527718 PIR:T48078 RefSeq:NP_191848.2
UniGene:At.51012 ProteinModelPortal:Q683I9 SMR:Q683I9
EnsemblPlants:AT3G62890.1 GeneID:825464 KEGG:ath:AT3G62890
GeneFarm:3529 TAIR:At3g62890 eggNOG:NOG281670 InParanoid:Q683I9
OMA:QESERIY PhylomeDB:Q683I9 ProtClustDB:CLSN2681595
Genevestigator:Q683I9 Uniprot:Q683I9
Length = 573
Score = 208 (78.3 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L ++++R+ + GYV DTKEVLLD+ E+ K+ L YH E+LA+ F ++ T GT +R+IKN
Sbjct: 470 LDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKN 529
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K++SK+ RE++VRD RF HF
Sbjct: 530 LRICGDCHLVMKMISKLFSREIVVRDCNRF-HHF 562
Score = 76 (31.8 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LLS R+ +++ E ++ ++P N+GAYV+L N
Sbjct: 372 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSN 412
Score = 37 (18.1 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 105 ISRNSIT-----AGCGQNGPFDEGLKFFGQML 131
I+ NS+T C G +EG +F M+
Sbjct: 298 INPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
>TAIR|locus:1009023396 [details] [associations]
symbol:AT5G40405 "AT5G40405" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00656840 RefSeq:NP_001031987.1
UniGene:At.63338 ProteinModelPortal:Q9FND7 PaxDb:Q9FND7
EnsemblPlants:AT5G40405.1 GeneID:3771385 KEGG:ath:AT5G40405
GeneFarm:3177 TAIR:At5g40405 eggNOG:NOG250628 OMA:LETANHG
PhylomeDB:Q9FND7 ProtClustDB:CLSN2918762 Genevestigator:Q9FND7
Uniprot:Q9FND7
Length = 612
Score = 192 (72.6 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 39/98 (39%), Positives = 59/98 (60%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ KD+ R+ GY DT V+ D++EE+K++ L H E+ A+ FGI+S + IR
Sbjct: 505 IDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIR 564
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + ++SKI +RE+IVRD RF HF
Sbjct: 565 IVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRF-HHF 601
Score = 87 (35.7 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW +LL A R+++N+EL + +L +E N GAYV+L N
Sbjct: 411 VWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSN 451
Score = 47 (21.6 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 22/99 (22%), Positives = 41/99 (41%)
Query: 33 ITDRFEERAVSIGHYADLDGISDQLPSSSGGRQVDIH-FDGGVDGLRPSRSGSVRKVFEI 91
IT R V + YA + + G + +++ + ++GL + +G K E+
Sbjct: 273 ITVRLATTLVDL--YAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL--AMNGFGEKCLEL 328
Query: 92 MAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
++ A++ S+ GC G DEG + F M
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Score = 37 (18.1 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 24 NEFMDKANGITDRFEE 39
++++D AN I DR E+
Sbjct: 53 HKYLDYANQILDRSEK 68
>TAIR|locus:2119440 [details] [associations]
symbol:AT4G13650 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035528 EMBL:AL161537
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BX827423 IPI:IPI00545859 PIR:T05234 RefSeq:NP_193101.2
UniGene:At.50335 ProteinModelPortal:Q9SVP7 SMR:Q9SVP7 PaxDb:Q9SVP7
PRIDE:Q9SVP7 EnsemblPlants:AT4G13650.1 GeneID:826999
KEGG:ath:AT4G13650 GeneFarm:3429 TAIR:At4g13650 eggNOG:NOG244096
InParanoid:Q9SVP7 OMA:YVCNALV PhylomeDB:Q9SVP7
ProtClustDB:CLSN2680966 Genevestigator:Q9SVP7 Uniprot:Q9SVP7
Length = 1064
Score = 182 (69.1 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E +DL +R + GYV D +L +++ EQK I++ H E+LA+ FG++S P I
Sbjct: 957 IHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPIN 1016
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K VSK+ +RE+IVRD RF HF
Sbjct: 1017 VMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRF-HHF 1053
Score = 112 (44.5 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW TLLSAC VH+N+E+ E A +L +EP ++ YV+L N
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSN 903
Score = 53 (23.7 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 93 AVRDFLEYCDY-AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
A + FLE +S N+I ++G E L F QM+ + ++ H ++ A S
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Score = 49 (22.3 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF-SRIMHAGSTENV 154
I+ N++ +G Q+G +E L+ F +M I + F S + A T N+
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Score = 44 (20.5 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMI 181
T + ++LSAC+ ++E+ E++ ++L +
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Score = 43 (20.2 bits), Expect = 5.4e-19, Sum P(3) = 5.4e-19
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 113 GCGQ-NGPFDEGLKFFGQML 131
GC + NG DEG K Q+L
Sbjct: 93 GCLKTNGSLDEGRKLHSQIL 112
Score = 37 (18.1 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM 130
+ + C G D+G+ +F M
Sbjct: 799 VLSACSHIGLVDKGIAYFESM 819
>TAIR|locus:2027554 [details] [associations]
symbol:AT1G56690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004154
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 PROSITE:PS51375 SUPFAM:SSF52954 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00523592 PIR:G96608 RefSeq:NP_176062.1 UniGene:At.66043
ProteinModelPortal:Q9FXB9 PaxDb:Q9FXB9 PRIDE:Q9FXB9
EnsemblPlants:AT1G56690.1 GeneID:842125 KEGG:ath:AT1G56690
GeneFarm:3461 TAIR:At1g56690 eggNOG:NOG302853 InParanoid:Q9FXB9
OMA:TNMIGGL PhylomeDB:Q9FXB9 ProtClustDB:CLSN2912806
Genevestigator:Q9FXB9 Uniprot:Q9FXB9
Length = 704
Score = 189 (71.6 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 188 AYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD 247
A ++++ E LL + GY PD VL DV+EE+K + L H ERLA+ +G++ P+
Sbjct: 595 AMILMMLEKTDGLLR---EAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPE 651
Query: 248 GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
G IRV+KNL K++SK+ RE+I+RD RF HF
Sbjct: 652 GVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRF-HHF 693
Score = 96 (38.9 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
VW LL AC+ H ++LAE A + EP+N G YV+L
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLL 540
Score = 47 (21.6 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 68 IHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFF 127
+ F G +D R RK++++M V+D + S N I C + G DE F
Sbjct: 146 VMFGGLIDD---GRIDKARKLYDMMPVKDVVA------STNMIGGLC-REGRVDEARLIF 195
Query: 128 GQM 130
+M
Sbjct: 196 DEM 198
Score = 46 (21.3 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQM 130
NSI +G +G +E LK F +M
Sbjct: 401 NSIISGYASHGLGEEALKIFHEM 423
Score = 46 (21.3 bits), Expect = 2.0e-19, Sum P(3) = 2.0e-19
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAI-SRNSITAGCGQNGPFDEGLKFFGQM 130
SR + K+ E D L++ AI S NSI +G NG E + F +M
Sbjct: 25 SRLSRIGKINEARKFFDSLQF--KAIGSWNSIVSGYFSNGLPKEARQLFDEM 74
Score = 42 (19.8 bits), Expect = 5.2e-19, Sum P(3) = 5.2e-19
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
+I C G +EGL+ F M
Sbjct: 437 AILTACSYAGKLEEGLEIFESM 458
Score = 42 (19.8 bits), Expect = 5.2e-19, Sum P(3) = 5.2e-19
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 74 VDGLRPSRSGSV-RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLM 132
+ G R + V RK+FE+M + +S S+ G +G ++ +FF M M
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEKT-------EVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 133 AKIKARHA 140
+ A +A
Sbjct: 263 KPVIACNA 270
>TAIR|locus:2202074 [details] [associations]
symbol:CRR22 "CHLORORESPIRATORY REDUCTION22" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016556
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0004519 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC007259 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00534837 RefSeq:NP_172596.1 UniGene:At.65900
ProteinModelPortal:Q3E6Q1 SMR:Q3E6Q1 STRING:Q3E6Q1 PaxDb:Q3E6Q1
PRIDE:Q3E6Q1 EnsemblPlants:AT1G11290.1 GeneID:837671
KEGG:ath:AT1G11290 GeneFarm:3466 TAIR:At1g11290 eggNOG:NOG272527
InParanoid:Q3E6Q1 OMA:HVITWNA PhylomeDB:Q3E6Q1
ProtClustDB:CLSN2681952 Genevestigator:Q3E6Q1 Uniprot:Q3E6Q1
Length = 809
Score = 182 (69.1 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L+ +++ GYVPDT ++L VE + K+ +L H E+LA+ FG+++T GTTI V KN
Sbjct: 707 LEKLICHIKEAGYVPDTN-LVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKN 765
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K +S + RE++VRD +RF HF
Sbjct: 766 LRVCADCHNATKYISLVTGREIVVRDMQRF-HHF 798
Score = 100 (40.3 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
NV+ +L AC++H+NV AEK A+ + + P++ G +V+L N
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 649
Score = 55 (24.4 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 105 ISRNSITAGCGQNG-PFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENV-----WL-- 156
+S N++ G QNG P D L +F QM +K + ++ A + ++ W+
Sbjct: 404 VSWNAMILGFAQNGRPID-ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 157 TLLSACRVHRNVELAEKVADM 177
++ +C + +NV + + DM
Sbjct: 463 VVMRSC-LDKNVFVTTALVDM 482
Score = 54 (24.1 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 63 GRQVDIHFDGGVDGL--RPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPF 120
G +D+ G++ + + + RKVF+ M RD +S N+I AG QNG
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL-------VSWNTIVAGYSQNGMA 217
Query: 121 DEGLKFFGQMLMAKIK 136
L+ M +K
Sbjct: 218 RMALEMVKSMCEENLK 233
Score = 41 (19.5 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
S+ + C +G + GLK F M
Sbjct: 544 SVISACSHSGLVEAGLKCFYMM 565
Score = 37 (18.1 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 22/90 (24%), Positives = 35/90 (38%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA----GSTENV-WLTLL 159
+S NS+ QN E + F +ML +K +HA G E ++ L
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 160 SA-CRVHRNVELAEKVADMILMIEPNNTGA 188
S + RNV + + M + +T A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
>TAIR|locus:2205200 [details] [associations]
symbol:OTP82 "AT1G08070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0031425 "chloroplast RNA
processing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC026875
GO:GO:0031425 Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197
HOGENOM:HOG000237569 IPI:IPI00516672 RefSeq:NP_172286.1
UniGene:At.43030 ProteinModelPortal:Q9LN01 SMR:Q9LN01
EnsemblPlants:AT1G08070.1 GeneID:837325 KEGG:ath:AT1G08070
GeneFarm:3172 TAIR:At1g08070 InParanoid:Q9LN01 OMA:EEWKEGA
PhylomeDB:Q9LN01 ProtClustDB:CLSN2682772 Genevestigator:Q9LN01
Uniprot:Q9LN01
Length = 741
Score = 226 (84.6 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 52/126 (41%), Positives = 75/126 (59%)
Query: 167 NVELAEKVADMIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQ 224
++E+ V + I+ P N Y +L E ++ LLE+ G+VPDT EVL ++EEE
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGML--EEMEVLLEKA---GFVPDTSEVLQEMEEEW 665
Query: 225 KKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNR 284
K+ L +H E+LA+ FG+IST GT + ++KNL R K++SKI RE+I RD
Sbjct: 666 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 725
Query: 285 RFCRHF 290
RF HF
Sbjct: 726 RF-HHF 730
Score = 123 (48.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL AC++H NVEL E A+ ++ IEP N G+YV+L N
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 580
Score = 38 (18.4 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 98 LEYCDYAISRNSITAGCGQNGPFDEGLKFFGQML 131
L Y D IS N++ G + E L F +ML
Sbjct: 327 LPYKD-VISWNTLIGGYTHMNLYKEALLLFQEML 359
>TAIR|locus:2155740 [details] [associations]
symbol:AT5G65570 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB026639 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00535497 RefSeq:NP_201360.1 UniGene:At.55704
ProteinModelPortal:Q9LSL8 SMR:Q9LSL8 PRIDE:Q9LSL8
EnsemblPlants:AT5G65570.1 GeneID:836683 KEGG:ath:AT5G65570
GeneFarm:3433 TAIR:At5g65570 eggNOG:NOG284207 InParanoid:Q9LSL8
OMA:KKNPAMS PhylomeDB:Q9LSL8 ProtClustDB:CLSN2686627
Genevestigator:Q9LSL8 Uniprot:Q9LSL8
Length = 738
Score = 163 (62.4 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 37/98 (37%), Positives = 59/98 (60%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L++L+++ + GYV D V D+EE K+ L+ H E+LA+ F + G+ IR
Sbjct: 632 ILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IR 690
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+VS+++ RE+I RD++RF HF
Sbjct: 691 ILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRF-HHF 727
Score = 119 (46.9 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W TLLSAC+VHR VE+AE++ IL IEP + G +++ N
Sbjct: 537 LWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSN 577
Score = 54 (24.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
K E V D +E D + ++ G Q G E +K F ML+ K++ ++ ++
Sbjct: 216 KTREAKLVLDRVEEKDVVLI-TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 147 -HAGSTENV 154
G+ +++
Sbjct: 275 ISCGNLKDI 283
Score = 42 (19.8 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 98 LEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
+EY + +S S+ +G QNG + L F +M+ IK
Sbjct: 328 IEYPNQ-VSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
>TAIR|locus:2049562 [details] [associations]
symbol:AT2G01510 "AT2G01510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC005560
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00535832 PIR:F84425 RefSeq:NP_178260.1 UniGene:At.66150
ProteinModelPortal:Q9ZVF4 SMR:Q9ZVF4 PaxDb:Q9ZVF4 PRIDE:Q9ZVF4
EnsemblPlants:AT2G01510.1 GeneID:814680 KEGG:ath:AT2G01510
GeneFarm:3359 TAIR:At2g01510 eggNOG:NOG303667 InParanoid:Q9ZVF4
OMA:AYSSVEF PhylomeDB:Q9ZVF4 ProtClustDB:CLSN2683536
Genevestigator:Q9ZVF4 Uniprot:Q9ZVF4
Length = 584
Score = 188 (71.2 bits), Expect = 8.0e-19, Sum P(3) = 8.0e-19
Identities = 42/98 (42%), Positives = 60/98 (61%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L ++L+++ + GYVPDT V DVE E+K+ L +H E+LA+ FG+I G IR
Sbjct: 477 IYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIR 536
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL + +K VS + E+I+RD RF HF
Sbjct: 537 VMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRF-HHF 573
Score = 91 (37.1 bits), Expect = 8.0e-19, Sum P(3) = 8.0e-19
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F + M +W LL AC VHR++ L +KVAD+++ P+ G+Y +L++
Sbjct: 371 FIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD-IGSYHVLLS 422
Score = 43 (20.2 bits), Expect = 8.0e-19, Sum P(3) = 8.0e-19
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
S +FE M V+D + + N+ A C Q G L++F +M
Sbjct: 162 SAEFLFESMQVKDLVAW-------NAFLAVCVQTGNSAIALEYFNKM 201
Score = 43 (20.2 bits), Expect = 8.0e-19, Sum P(3) = 8.0e-19
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
L+ + + R +FE M R+ +S +++ G NG E L F M ++
Sbjct: 256 LKCGNTEAARVLFEEMKQRN-------VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 137 ARHAPFSRIMHAGS 150
+ F ++ A S
Sbjct: 309 PNYVTFLGVLSACS 322
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIK 136
+ + C G +EG ++F M+ + K
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDK 343
Score = 37 (18.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 92 MAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKARH-APFSRI 145
+A+ F + C A+ +S T + CGQ G + G + + + +I +R+
Sbjct: 193 IALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARL 252
Query: 146 -MH--AGSTE 152
MH G+TE
Sbjct: 253 DMHLKCGNTE 262
>TAIR|locus:4010713895 [details] [associations]
symbol:AT4G21065 "AT4G21065" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX826462 EMBL:BX827021
IPI:IPI00846696 IPI:IPI00921709 PIR:A85240 PIR:T10649
RefSeq:NP_001078414.1 RefSeq:NP_001078415.1 UniGene:At.49734
ProteinModelPortal:A8MQA3 SMR:A8MQA3 PRIDE:A8MQA3
EnsemblPlants:AT4G21065.1 GeneID:5008150 KEGG:ath:AT4G21065
GeneFarm:3325 TAIR:At4g21065 eggNOG:NOG242330 OMA:PDTHTYP
PhylomeDB:A8MQA3 ProtClustDB:CLSN2699103 Genevestigator:A8MQA3
Uniprot:A8MQA3
Length = 595
Score = 234 (87.4 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 70/236 (29%), Positives = 118/236 (50%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
HF VD L +R+G V+K +E ++ + I R + A C +G D L F
Sbjct: 362 HFGCMVDLL--ARAGQVKKAYEY--IKSMPMQPNVVIWRTLLGA-CTVHG--DSDLAEFA 414
Query: 129 QMLMAKIKARHA-PFSRIMHAGSTENVWLTLLSACRV-----------HRNVELAEKVAD 176
++ + +++ H+ + + + ++E W + + H VE+ +V +
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 177 MIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
++ P + Y LK++ R+ EGYVP V +DVEEE+K+N + YH E
Sbjct: 475 FLMGDKSHPQSDAIYA-----KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 529
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++A+ F +ISTP+ + I V+KNL K+VSK+ +RE++VRD RF HF
Sbjct: 530 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRF-HHF 584
>TAIR|locus:2130354 [details] [associations]
symbol:AT4G14820 "AT4G14820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00529570 PIR:C71411
RefSeq:NP_193218.1 UniGene:At.65379 ProteinModelPortal:O23337
SMR:O23337 EnsemblPlants:AT4G14820.1 GeneID:827139
KEGG:ath:AT4G14820 GeneFarm:3141 TAIR:At4g14820 eggNOG:NOG309125
InParanoid:O23337 OMA:VLWHSEK PhylomeDB:O23337
ProtClustDB:CLSN2685361 Genevestigator:O23337 Uniprot:O23337
Length = 722
Score = 181 (68.8 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 40/96 (41%), Positives = 61/96 (63%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTP-----DGT-T 250
L +++ +++ GYVPD VL+DVEEE+KK+++ +H E+LAL FG+++ D
Sbjct: 613 LDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
IR++KNL K+VSK+ RE+IVRD RF
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRF 708
Score = 102 (41.0 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
M S +W +L+SACR+H +EL + A IL +EP++ GA V++ N
Sbjct: 507 MPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Score = 45 (20.9 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 113 GCGQNGPFDEGLKFFGQM 130
GC +G +EG K F M
Sbjct: 454 GCSHSGLVEEGKKIFASM 471
>TAIR|locus:2090990 [details] [associations]
symbol:AT3G14330 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB022220 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00545125 RefSeq:NP_188050.1
UniGene:At.53310 ProteinModelPortal:Q9LUL5 PaxDb:Q9LUL5
PRIDE:Q9LUL5 EnsemblPlants:AT3G14330.1 GeneID:820653
KEGG:ath:AT3G14330 GeneFarm:3442 TAIR:At3g14330 eggNOG:NOG291469
InParanoid:Q9LUL5 OMA:VCGHSER PhylomeDB:Q9LUL5
ProtClustDB:CLSN2684926 Genevestigator:Q9LUL5 Uniprot:Q9LUL5
Length = 710
Score = 180 (68.4 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 38/93 (40%), Positives = 56/93 (60%)
Query: 199 DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLP 258
+L E +E+ GY P+T VL DV+EE K N + H ERLA + +I T +G IR+ KNL
Sbjct: 609 ELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLR 668
Query: 259 SLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
K+VS++ R +++RD +RF HF+
Sbjct: 669 VCADCHSWMKIVSQVTRRVIVLRDTKRF-HHFV 700
Score = 101 (40.6 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
++W +LL++CR+H NV + E A + ++EP+N G YV++ N
Sbjct: 507 SIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSN 548
Score = 39 (18.8 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
++ +GC G + GL F +M
Sbjct: 443 ALLSGCSDTGLTEYGLSLFERM 464
Score = 38 (18.4 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 86 RKVFEIMAVRDFLEY-----CDYAISRN 108
R+VF++M +D + C YAI+ N
Sbjct: 392 RRVFDVMLTKDLASWNIMLNC-YAINGN 418
Score = 37 (18.1 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMIL 179
ST + LL AC +++ K+ +IL
Sbjct: 129 STPEAYTDLLHACISAKSLHHGIKICSLIL 158
>TAIR|locus:2178188 [details] [associations]
symbol:MEF7 "AT5G09950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016893 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524906
RefSeq:NP_196557.1 UniGene:At.65502 ProteinModelPortal:Q9FIB2
SMR:Q9FIB2 PaxDb:Q9FIB2 PRIDE:Q9FIB2 EnsemblPlants:AT5G09950.1
GeneID:830856 KEGG:ath:AT5G09950 GeneFarm:3357 TAIR:At5g09950
eggNOG:NOG278872 InParanoid:Q9FIB2 OMA:SGYIHNE PhylomeDB:Q9FIB2
ProtClustDB:CLSN2687521 Genevestigator:Q9FIB2 Uniprot:Q9FIB2
Length = 995
Score = 179 (68.1 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 41/100 (41%), Positives = 59/100 (59%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT- 250
+I + LK+L +M GYVP T L D+E+E K+ IL YH E+LA+ F + + T
Sbjct: 886 VIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP 945
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR++KNL K +SKI R++I+RD+ RF HF
Sbjct: 946 IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRF-HHF 984
Score = 90 (36.7 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 154 VWLTLLSAC-RVH-RNVELAEKVADMILMIEPNNTGAYVILIN 194
+W T+L AC R + R EL +K A+M+ +EP N YV+L N
Sbjct: 791 IWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Score = 61 (26.5 bits), Expect = 2.8e-18, Sum P(3) = 2.8e-18
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
L S S RKVF+ M +R+ C +S I +G +NG E L F M+ I
Sbjct: 47 LETGDSVSARKVFDEMPLRN----C---VSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 137 ARHAPFSRIMHA 148
+ F ++ A
Sbjct: 100 SNQYAFVSVLRA 111
Score = 52 (23.4 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
++ GS+ R+VF M +D ++S NS+ G QNG F E ++ + M
Sbjct: 360 AKCGSIADARRVFYFMTDKD-------SVSWNSMITGLDQNGCFIEAVERYKSM 406
Score = 51 (23.0 bits), Expect = 3.0e-17, Sum P(3) = 3.0e-17
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 106 SRNSITAGCGQNGPFDEGLKFFGQM-LMAKIKARHAPFSRIM----HAGSTE 152
S NS+ +G ++G +E LK F M L + H F ++ HAG E
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Score = 45 (20.9 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 24/114 (21%), Positives = 50/114 (43%)
Query: 57 LPSSSGGRQVD-IHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCG 115
L + G++++ I F + + G + K +A+++ + D A + N++ A G
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI--ADEATTENALIACYG 563
Query: 116 QNGPFDEGLKFFGQMLMAKIKAR-HAPFSRIMH----AGSTENVWLTLLSACRV 164
+ G D K F +M + ++ S +H A + + VW L + R+
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Score = 42 (19.8 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
K+FE M + D D+ ++ + + C G +EG K F M
Sbjct: 706 KLFETMKL-DGQTPPDH-VTFVGVLSACSHAGLLEEGFKHFESM 747
>TAIR|locus:2034456 [details] [associations]
symbol:AT1G31920 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079041 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226634 IPI:IPI00541310 PIR:D86443 RefSeq:NP_174474.1
UniGene:At.17278 ProteinModelPortal:Q9C6T2 SMR:Q9C6T2
EnsemblPlants:AT1G31920.1 GeneID:840082 KEGG:ath:AT1G31920
GeneFarm:3171 TAIR:At1g31920 eggNOG:NOG324786 InParanoid:Q9C6T2
OMA:MEWQLKF PhylomeDB:Q9C6T2 ProtClustDB:CLSN2682592
Genevestigator:Q9C6T2 Uniprot:Q9C6T2
Length = 606
Score = 177 (67.4 bits), Expect = 4.3e-18, Sum P(3) = 4.3e-18
Identities = 35/94 (37%), Positives = 58/94 (61%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L + +++ EGY PD ++LL+V+EE+KK L H +++A+ FG++ TP G+ I+
Sbjct: 499 IYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIK 558
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ +NL K +S I RE++VRD RF
Sbjct: 559 IARNLRMCSDCHTYTKKISMIYEREIVVRDRNRF 592
Score = 94 (38.1 bits), Expect = 4.3e-18, Sum P(3) = 4.3e-18
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W T LS CRV +N+EL + A +L + +N G Y+++ N
Sbjct: 405 IWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISN 445
Score = 49 (22.3 bits), Expect = 4.3e-18, Sum P(3) = 4.3e-18
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 67 DIHFDGGVDGLRPSRSG-SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLK 125
++ + + GL G S ++F M +++ LE D+ + + + A C +G EG +
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKM-IKEGLEP-DHVVYVSVLNA-CSHSGLVKEGRR 356
Query: 126 FFGQML 131
F +ML
Sbjct: 357 VFAEML 362
>TAIR|locus:2060640 [details] [associations]
symbol:OTP81 "ORGANELLE TRANSCRIPT PROCESSING 81"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC005496 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.38446 UniGene:At.49361 GO:GO:0031425
HOGENOM:HOG000237569 EMBL:AY500319 IPI:IPI00520465 PIR:C84700
RefSeq:NP_180537.1 ProteinModelPortal:O82380 SMR:O82380
PRIDE:O82380 EnsemblPlants:AT2G29760.1 GeneID:817526
KEGG:ath:AT2G29760 GeneFarm:3355 TAIR:At2g29760 eggNOG:NOG235387
InParanoid:O82380 OMA:FVWSAMI PhylomeDB:O82380
ProtClustDB:CLSN2683829 Genevestigator:O82380 Uniprot:O82380
Length = 738
Score = 175 (66.7 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 39/95 (41%), Positives = 59/95 (62%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGIISTPDGTTIRVIK 255
L +++E+++ GY P+ +VL +EEE+ K+ L H E+LA+ +G+IST IRVIK
Sbjct: 634 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 693
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
NL K++S++ RE+IVRD RF HF
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRF-HHF 727
Score = 113 (44.8 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F M + +VW LL AC++H N+ LAE +L +EP N GA+V+L N
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Score = 67 (28.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 28/93 (30%), Positives = 39/93 (41%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRV 164
+S NS+ G Q G D+ L+ F +M +KA H + G +LSAC
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASH-----VTMVG--------VLSACAK 244
Query: 165 HRNVELAEKVADMILMIEPNNTGAYVILINEAL 197
RN+E +V I E N + L N L
Sbjct: 245 IRNLEFGRQVCSYI---EENRVNVNLTLANAML 274
>TAIR|locus:2205425 [details] [associations]
symbol:AT1G68930 "AT1G68930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011665 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00528975 PIR:H96713 RefSeq:NP_177059.1 UniGene:At.52442
ProteinModelPortal:Q9CAA8 SMR:Q9CAA8 EnsemblPlants:AT1G68930.1
GeneID:843226 KEGG:ath:AT1G68930 GeneFarm:3231 TAIR:At1g68930
eggNOG:NOG300864 HOGENOM:HOG000237570 InParanoid:Q9CAA8 OMA:EEGAQFH
PhylomeDB:Q9CAA8 ProtClustDB:CLSN2682344 Genevestigator:Q9CAA8
Uniprot:Q9CAA8
Length = 743
Score = 182 (69.1 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 43/105 (40%), Positives = 58/105 (55%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ + Y+ I L++L ++ GY PDT V DVEE K +L YH ERLA+ FG+I
Sbjct: 627 DESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLI 686
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
P G IRV KNL + K +S + RE++VRD RF R
Sbjct: 687 FVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHR 731
Score = 83 (34.3 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
W TLLSACR N+E+ + A+ ++ ++P++ Y +L
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLL 580
Score = 53 (23.7 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
++S ++ G QNG E ++ F +M + +K PF ++ A
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Score = 48 (22.0 bits), Expect = 3.7e-17, Sum P(3) = 3.7e-17
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
+S ++ G GQ G +E +K F M + I H + + A
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Score = 40 (19.1 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 103 YAISRNSITAGCGQNGPFDEGLKFFGQM 130
Y NS+ G+ G D+ + F +M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
>TAIR|locus:2082886 [details] [associations]
symbol:EMB2261 "embryo defective 2261" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132956
GO:GO:0009793 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AY864347
EMBL:AY864348 IPI:IPI00540837 PIR:T45822 RefSeq:NP_190486.2
UniGene:At.35640 ProteinModelPortal:Q5G1T1 SMR:Q5G1T1 PRIDE:Q5G1T1
EnsemblPlants:AT3G49170.1 GeneID:824078 KEGG:ath:AT3G49170
GeneFarm:3524 TAIR:At3g49170 eggNOG:NOG255947 InParanoid:Q5G1T1
OMA:CALIDMF PhylomeDB:Q5G1T1 ProtClustDB:CLSN2918315
Genevestigator:Q5G1T1 Uniprot:Q5G1T1
Length = 850
Score = 174 (66.3 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEE----QKKNILYYHGERLALVFGIISTPDG 248
I + L L+ +++ GYVPDT VL +EEE +K+ +LY H E++A+ FG+IST
Sbjct: 739 IYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKS 798
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+RV KNL + K +S + RE+++RD RF HF
Sbjct: 799 RPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRF-HHF 839
Score = 107 (42.7 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW T L ACRVH N EL + A IL ++PN AY+ L N
Sbjct: 645 VWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Score = 50 (22.7 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 24/103 (23%), Positives = 40/103 (38%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
S+ GS+ + +F+E + IS S+ G ++G L+ F QM+ +K
Sbjct: 520 SKCGSIDTASRVF---NFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 140 APFSRIM----HAGSTENVWLTLLSACRVHRNVELAEKVADMI 178
+ I+ H G W S H+ E A M+
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMV 618
Score = 37 (18.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 114 CGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA-GSTENVWL 156
C Q G E ++FF M+++ ++ S + A EN+ L
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Score = 37 (18.1 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
S+ K A+R L D S + A C +G D+ K F +M
Sbjct: 286 SLGKQLHSWAIRSGL-VDDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
>TAIR|locus:2130389 [details] [associations]
symbol:LOI1 "lovastatin insensitive 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0016125 "sterol metabolic process"
evidence=IMP] [GO:0019287 "isopentenyl diphosphate biosynthetic
process, mevalonate pathway" evidence=IMP] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=IMP] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 GO:GO:0050790 GO:GO:0048364
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0016125 GO:GO:0034046
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0019288 GO:GO:0019287 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AK227954 EMBL:BT010464 IPI:IPI00542565 PIR:F71411
RefSeq:NP_193221.3 UniGene:At.33233 ProteinModelPortal:Q0WSH6
SMR:Q0WSH6 STRING:Q0WSH6 PRIDE:Q0WSH6 EnsemblPlants:AT4G14850.1
GeneID:827142 KEGG:ath:AT4G14850 GeneFarm:3145 TAIR:At4g14850
eggNOG:NOG292234 InParanoid:Q0WSH6 OMA:CSAFDMY PhylomeDB:Q0WSH6
ProtClustDB:CLSN2681604 Genevestigator:Q0WSH6 Uniprot:Q0WSH6
Length = 684
Score = 183 (69.5 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 44/96 (45%), Positives = 53/96 (55%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L ME GY PD K L D+EEE+K + +H E+LAL FG++S P IR
Sbjct: 577 IQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIR 636
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K VS V RE+IVRDN RF R
Sbjct: 637 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHR 672
Score = 81 (33.6 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F + M T +VW L +ACR+H +L A+ + ++P ++G +V+L N
Sbjct: 471 FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Score = 52 (23.4 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 23/74 (31%), Positives = 31/74 (41%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN--VWLTLLSAC 162
++RNS+ G G D L F +M AP G T N +++LLSAC
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEM---------APRG----CGPTPNYMTFVSLLSAC 423
Query: 163 RVHRNVELAEKVAD 176
VE K+ D
Sbjct: 424 SRAGAVENGMKIFD 437
Score = 46 (21.3 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
+FE MA R +Y ++ S+ + C + G + G+K F M
Sbjct: 398 LFEEMAPRGCGPTPNY-MTFVSLLSACSRAGAVENGMKIFDSM 439
Score = 44 (20.5 bits), Expect = 7.2e-17, Sum P(3) = 7.2e-17
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM 130
+S S+ +G QNG F L F +M
Sbjct: 74 VSWTSLISGLAQNGHFSTALVEFFEM 99
>TAIR|locus:2130644 [details] [associations]
symbol:AT4G15720 "AT4G15720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z97339 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL161542
HOGENOM:HOG000237570 EMBL:AY072074 EMBL:AY096603 IPI:IPI00537442
PIR:D71422 RefSeq:NP_193307.2 UniGene:At.33147 UniGene:At.48860
ProteinModelPortal:Q8VYH0 SMR:Q8VYH0 PRIDE:Q8VYH0
EnsemblPlants:AT4G15720.1 GeneID:827250 KEGG:ath:AT4G15720
GeneFarm:3138 TAIR:At4g15720 eggNOG:NOG266566 InParanoid:Q8VYH0
OMA:DCHEAFK PhylomeDB:Q8VYH0 ProtClustDB:CLSN2690297
Genevestigator:Q8VYH0 Uniprot:Q8VYH0
Length = 616
Score = 185 (70.2 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 193 INEALKDLLERMEQEGY------VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTP 246
I LKDL +RM++ G+ + + V +DV+EE K ++ H ERLAL +G++ P
Sbjct: 503 IERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLP 562
Query: 247 DGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
G+TIR++ NL R K++S+IV RE++VRD RF
Sbjct: 563 AGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRF 602
Score = 68 (29.0 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W LLSA R+H VE+ + + ++ T AY+ L N
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSN 449
Score = 54 (24.1 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 93 AVRDFLEY-CDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
A + FL C IS S+ ++G + +K F +M+ +I + ++HA S
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Score = 39 (18.8 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 93 AVRDFLEYCDYAISRNSITA-----GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR 144
AV+ F E I+ N +T C +G +EGL++ LMA+ K P SR
Sbjct: 321 AVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLS--LMAE-KYGVVPDSR 374
>TAIR|locus:2167593 [details] [associations]
symbol:AT5G44230 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005239 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ447037
IPI:IPI00540587 RefSeq:NP_199236.1 UniGene:At.55349
ProteinModelPortal:Q9FFG8 SMR:Q9FFG8 EnsemblPlants:AT5G44230.1
GeneID:834446 KEGG:ath:AT5G44230 GeneFarm:3182 TAIR:At5g44230
eggNOG:NOG302114 InParanoid:Q9FFG8 OMA:VISWTEL PhylomeDB:Q9FFG8
ProtClustDB:CLSN2687233 Genevestigator:Q9FFG8 Uniprot:Q9FFG8
Length = 657
Score = 164 (62.8 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 36/98 (36%), Positives = 57/98 (58%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L++L+ER+ GY PD V DV + K+ IL H E+LAL F +++T +TI
Sbjct: 550 IQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTIT 609
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL ++ S++ + +I+RDN RF HF
Sbjct: 610 IMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRF-HHF 646
Score = 104 (41.7 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW LL ACR+H N E+AE A+ + +EP+ G Y++L N
Sbjct: 455 VWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSN 495
Score = 47 (21.6 bits), Expect = 4.9e-17, Sum P(3) = 4.9e-17
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGST 151
++ G G FDE + +G M +I FS ++ A T
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Score = 42 (19.8 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA 137
++ ++ G QN E L++F +M + I+A
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279
>TAIR|locus:2056794 [details] [associations]
symbol:REME1 "required for efficiency of mitochondrial
editing 1" species:3702 "Arabidopsis thaliana" [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0009451 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AC007196 EMBL:BT003840 IPI:IPI00519155 PIR:C84453
RefSeq:NP_178481.1 UniGene:At.41363 ProteinModelPortal:Q9SI53
SMR:Q9SI53 PRIDE:Q9SI53 EnsemblPlants:AT2G03880.1 GeneID:814914
KEGG:ath:AT2G03880 GeneFarm:3431 TAIR:At2g03880 eggNOG:NOG254665
InParanoid:Q9SI53 OMA:FRSMKKL PhylomeDB:Q9SI53
ProtClustDB:CLSN2683857 Genevestigator:Q9SI53 Uniprot:Q9SI53
Length = 630
Score = 171 (65.3 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 38/107 (35%), Positives = 63/107 (58%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+N+ ++ +++ L L+ R+ GYVP+T VL D+E EQ ++ L +H E+LAL FG++
Sbjct: 514 DNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLM 573
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ P IR+ KNL K+ SK+ R +++RD R+ HF
Sbjct: 574 TLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRY-HHF 619
Score = 106 (42.4 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W TLL ACRV RN+ LAE A ++ ++P + G Y +L N
Sbjct: 430 WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Score = 59 (25.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 21/62 (33%), Positives = 26/62 (41%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACR 163
AI NSI G QN D L+ F +M A A A + ++ A T L L
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA-CTGLALLELGMQAH 283
Query: 164 VH 165
VH
Sbjct: 284 VH 285
>TAIR|locus:2032840 [details] [associations]
symbol:AT1G16480 "AT1G16480" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00519279 RefSeq:NP_173097.2 UniGene:At.11325
ProteinModelPortal:F4I4G1 SMR:F4I4G1 EnsemblPlants:AT1G16480.1
GeneID:838218 KEGG:ath:AT1G16480 OMA:DEEQKEH ArrayExpress:F4I4G1
Uniprot:F4I4G1
Length = 937
Score = 210 (79.0 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 45/123 (36%), Positives = 75/123 (60%)
Query: 168 VELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKN 227
V+L +KV+ + + T + I L+D+ + +++ GYV DT + L D +EEQK++
Sbjct: 808 VKLKDKVSSFGI---GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEH 864
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
L+ H ERLAL + ++STP+G+T+R+ KNL K VS+++ R +++RD RF
Sbjct: 865 NLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRF- 923
Query: 288 RHF 290
HF
Sbjct: 924 HHF 926
Score = 56 (24.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
+F+ M+ RD IS NSI A QNG +E + F M
Sbjct: 217 IFDQMSERD-------TISWNSIAAAYAQNGHIEESFRIFSLM 252
Score = 56 (24.8 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 106 SRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS 150
S N + + G++G F+E F +ML IK H F ++ A S
Sbjct: 633 SWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677
Score = 55 (24.4 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
R +F+IM VR+ +S N++ +G + G + EG++FF +M IK
Sbjct: 12 RHLFDIMPVRN-------EVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK 55
Score = 52 (23.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNS-----ITAGCGQNGP-FDEGLKFFG 128
SG VR + + F + CD I +S + CG++G F EG++ G
Sbjct: 31 SGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 83
Score = 38 (18.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 109 SITAGCGQNGPFDEGLKFF 127
S+ C G D+GL ++
Sbjct: 671 SLLTACSHGGLVDKGLAYY 689
>TAIR|locus:2056740 [details] [associations]
symbol:OTP85 "ORGANELLE TRANSCRIPT PROCESSING 85"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0016556 "mRNA
modification" evidence=RCA] InterPro:IPR011990 EMBL:AC004138
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0031425 HOGENOM:HOG000237569
EMBL:AF517844 IPI:IPI00532421 PIR:H84442 RefSeq:NP_178398.1
UniGene:At.41442 ProteinModelPortal:Q8LK93 SMR:Q8LK93 PaxDb:Q8LK93
PRIDE:Q8LK93 EnsemblPlants:AT2G02980.1 GeneID:814827
KEGG:ath:AT2G02980 GeneFarm:3321 TAIR:At2g02980 eggNOG:NOG294028
InParanoid:O80613 OMA:PTLINMY PhylomeDB:Q8LK93
ProtClustDB:CLSN2683708 Genevestigator:Q8LK93 Uniprot:Q8LK93
Length = 603
Score = 209 (78.6 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 40/99 (40%), Positives = 69/99 (69%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVL-LDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
++ AL ++++ ++ GYVPDT V+ ++ +++K+ L YH E+LA+ FG+++TP GTTI
Sbjct: 495 LHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTI 554
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RV+KNL R + K++S I R++++RD +RF HF
Sbjct: 555 RVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRF-HHF 592
Score = 110 (43.8 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYV 210
T +W LL+AC H N++LAEKV++ I ++ ++ G YVIL N L R ++ YV
Sbjct: 398 TPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN-----LYARNKKWEYV 452
Query: 211 PDTKEVLLD 219
++V+ D
Sbjct: 453 DSLRKVMKD 461
Score = 50 (22.7 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 114 CGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVW 155
C G +EG K+F QM ++ IK + + AG+ E+ +
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
>TAIR|locus:2183931 [details] [associations]
symbol:AT5G13230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL163491 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546460 PIR:T48570 RefSeq:NP_196827.1
UniGene:At.54832 ProteinModelPortal:Q9LYV3 SMR:Q9LYV3 PaxDb:Q9LYV3
PRIDE:Q9LYV3 EnsemblPlants:AT5G13230.1 GeneID:831163
KEGG:ath:AT5G13230 GeneFarm:3537 TAIR:At5g13230 eggNOG:NOG313696
InParanoid:Q9LYV3 OMA:INGMLEW PhylomeDB:Q9LYV3
ProtClustDB:CLSN2687006 Genevestigator:Q9LYV3 Uniprot:Q9LYV3
Length = 822
Score = 188 (71.2 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 41/100 (41%), Positives = 59/100 (59%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT- 250
LIN L+ L + + GYVPD VLLD+++E+K L+ H ERLAL +G++ P
Sbjct: 713 LINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNR 772
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
I ++KNL KV+S IV R++++RD RF HF
Sbjct: 773 ILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRF-HHF 811
Score = 74 (31.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LSA N E A + A+ IL I P + YV++ N
Sbjct: 620 IWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSN 660
Score = 45 (20.9 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S R VFE + +D + + I + +NG F++ LK M MA + F
Sbjct: 199 SARTVFEGILCKDIVVWA-------GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251
Query: 144 RIMHA 148
+ A
Sbjct: 252 TALKA 256
Score = 43 (20.2 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 87 KVFEIMAVRDFLEYCD-YAISRNSITAGCGQNGPFDEGLKFFGQML 131
++ +IM RD C ++ + +GC G D+G + F M+
Sbjct: 536 RILDIMKDRD----CKPNGLTFLGVLSGCSNAGLIDQGQECFESMI 577
>TAIR|locus:2010652 [details] [associations]
symbol:AT1G04840 "AT1G04840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC004809 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518058 PIR:F86181 RefSeq:NP_171976.1
UniGene:At.51482 ProteinModelPortal:Q9MAT2 SMR:Q9MAT2
EnsemblPlants:AT1G04840.1 GeneID:839402 KEGG:ath:AT1G04840
GeneFarm:3457 TAIR:At1g04840 eggNOG:NOG254388 InParanoid:Q9MAT2
OMA:GDCHSLM PhylomeDB:Q9MAT2 ProtClustDB:CLSN2681950
Genevestigator:Q9MAT2 Uniprot:Q9MAT2
Length = 665
Score = 179 (68.1 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 41/95 (43%), Positives = 59/95 (62%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L +++ Q+GY P + D+EEE+K+N+ H E+LAL G + T GTTIR+IKN
Sbjct: 562 LDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKN 621
Query: 257 LPSLRGLRHG-NKVVSKIVHREMIVRDNRRFCRHF 290
L + G H K VSKI R++++RD R+F HF
Sbjct: 622 L-RICGDCHSLMKYVSKISQRDILLRDARQF-HHF 654
Score = 78 (32.5 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
W L AC+ H+ AE V+ +L ++P G+Y+ L
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFL 502
Score = 47 (21.6 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 22/109 (20%), Positives = 46/109 (42%)
Query: 57 LPSSSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQ 116
+P + G + G VD +R+ +++FE+M ++ +S ++ G Q
Sbjct: 222 MPERNSGSWSTL-IKGYVDSGELNRA---KQLFELMPEKN-------VVSWTTLINGFSQ 270
Query: 117 NGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVH 165
G ++ + + +ML +K + ++ A S L S R+H
Sbjct: 271 TGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA---LGSGIRIH 316
Score = 45 (20.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 142 FSRIMHAGST--ENVWLTLLSACRVHRNVELAEKVADMILM---IEPNNTGAYVILI--- 193
F ++M++G E V+L +L+AC V+L D + + IEP YV+++
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT-LKHYVLVVDLL 440
Query: 194 ------NEALKDLLERM 204
NEA +L+E M
Sbjct: 441 GRAGKLNEA-HELVENM 456
>TAIR|locus:2097365 [details] [associations]
symbol:AT3G49710 "AT3G49710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533707 PIR:T46037 RefSeq:NP_190540.1
UniGene:At.22445 UniGene:At.53859 ProteinModelPortal:Q9M2Y7
SMR:Q9M2Y7 EnsemblPlants:AT3G49710.1 GeneID:824133
KEGG:ath:AT3G49710 GeneFarm:3525 TAIR:At3g49710 eggNOG:NOG274207
InParanoid:Q9M2Y7 OMA:DDCSFVC PhylomeDB:Q9M2Y7
ProtClustDB:CLSN2684258 Genevestigator:Q9M2Y7 Uniprot:Q9M2Y7
Length = 721
Score = 167 (63.8 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 37/97 (38%), Positives = 62/97 (63%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEE--EQKKNI-LYYHGERLALVFGIISTPDGT 249
+NE L++++++M++ GYV D K ++ +E E + + L +H E+LA+ FG++ST DG
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ V+KNL + K +S + RE+IVRDN RF
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRF 707
Score = 96 (38.9 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W LL ACR H+N+ LAE+ A+ +++++P YV+L N
Sbjct: 518 WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLAN 557
Score = 46 (21.3 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
A+S N + G Q+G E L + +ML + I F ++ A
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Score = 45 (20.9 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 102 DYAISRNSIT-----AGCGQNGPFDEGLKFFGQM 130
D I+ N IT + C G DEG ++F M
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Score = 39 (18.8 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
S+ G +R+ + D L D +S NS+ GQ+ + L + +M+ K
Sbjct: 184 SKGGLLREAVSVFYGMDELR--D-EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 140 APFSRIMHA 148
+ +++A
Sbjct: 241 FTLASVLNA 249
>TAIR|locus:2127826 [details] [associations]
symbol:MEF8S "MEF8 similar" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR PROSITE:PS51375
EMBL:AL161581 EMBL:AL034567 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237569 eggNOG:NOG235837 EMBL:BT015164 EMBL:AK175781
IPI:IPI00524403 PIR:T05355 RefSeq:NP_194971.1 UniGene:At.24424
UniGene:At.66647 ProteinModelPortal:Q9SUU7 SMR:Q9SUU7 IntAct:Q9SUU7
EnsemblPlants:AT4G32450.1 GeneID:829380 KEGG:ath:AT4G32450
GeneFarm:3456 TAIR:At4g32450 InParanoid:Q9SUU7 OMA:ISAYNSI
PhylomeDB:Q9SUU7 ProtClustDB:CLSN2916168 Genevestigator:Q9SUU7
Uniprot:Q9SUU7
Length = 537
Score = 178 (67.7 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 41/91 (45%), Positives = 55/91 (60%)
Query: 196 ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
ALK L E M + GYVP +K L DV++E K L+ H ER A + + TP + IRV+K
Sbjct: 433 ALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMK 492
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
NL + K++SKIV RE+I RD +RF
Sbjct: 493 NLRVCADCHNALKLMSKIVGRELISRDAKRF 523
Score = 61 (26.5 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 14/58 (24%), Positives = 32/58 (55%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNN------TGAYVILINEALKDLLERM 204
++W TL++ RVH ++ L ++ DM+ ++ + G + ++ +K+ L+RM
Sbjct: 349 DLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRM 406
Score = 45 (20.9 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 6 VILERNENVELSNGLAGCNEFMDKANGITDRFEERAVSIGHYA-DLDGIS--DQLPS 59
+I +RN+N + S+G C+ + NG+ +E H+ D G S D+L S
Sbjct: 105 IINQRNQNWQSSDG---CSSYGTTGNGVP---QENNTGGNHFQQDHSGHSSLDELDS 155
Score = 37 (18.1 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 114 CGQNGPFDEGLKFFGQM 130
CG G +EGL F M
Sbjct: 292 CGVLGDMNEGLLHFESM 308
>TAIR|locus:2124137 [details] [associations]
symbol:DOT4 "DEFECTIVELY ORGANIZED TRIBUTARIES 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010087 "phloem or xylem histogenesis"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010588 "cotyledon vascular tissue pattern
formation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0010087 GO:GO:0048366
GO:GO:0010305 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL035526
GO:GO:0010588 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK221529
IPI:IPI00547122 PIR:T04867 RefSeq:NP_193610.1 UniGene:At.54400
ProteinModelPortal:Q9SN39 SMR:Q9SN39 PaxDb:Q9SN39 PRIDE:Q9SN39
EnsemblPlants:AT4G18750.1 GeneID:827609 KEGG:ath:AT4G18750
GeneFarm:3432 TAIR:At4g18750 eggNOG:NOG288811 InParanoid:Q9SN39
OMA:EGWRFFN PhylomeDB:Q9SN39 ProtClustDB:CLSN2685451
Genevestigator:Q9SN39 Uniprot:Q9SN39
Length = 871
Score = 178 (67.7 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 40/94 (42%), Positives = 55/94 (58%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ + RM +EGY P TK L+D EE +K+ L H E+LA+ GIIS+ G IR
Sbjct: 764 IEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 823
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V KNL K +SK+ RE+++RD+ RF
Sbjct: 824 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Score = 128 (50.1 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
+W LL CR+H +V+LAEKVA+ + +EP NTG YV++ N E +K L +R+
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 206 QEG 208
Q G
Sbjct: 730 QRG 732
Score = 82 (33.9 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
L+ R S RKVF+ M RD IS NSI G NG ++GL F QML++ I+
Sbjct: 241 LKNQRVDSARKVFDEMTERD-------VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 137 ARHAPFSRIMHAGSTENVWLTL 158
A + AG ++ ++L
Sbjct: 294 IDLATIVSVF-AGCADSRLISL 314
Score = 67 (28.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTENVWL---T 157
+S + AG G +G E + F QM A I+A F ++ H+G + W
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI 625
Query: 158 LLSACRVHRNVELAEKVADMI 178
+ C++ VE + DM+
Sbjct: 626 MRHECKIEPTVEHYACIVDML 646
Score = 45 (20.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 80 SRSGSVRK---VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++ GS+++ VF M V+D IS N+I G +N +E L F +L K
Sbjct: 443 AKCGSMQEAELVFSEMRVKDI-------ISWNTIIGGYSKNCYANEALSLFNLLLEEK-- 493
Query: 137 ARHAPFSR 144
R +P R
Sbjct: 494 -RFSPDER 500
Score = 43 (20.2 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 97 FLEYCDYAI-SRNSITAGCGQNGPFDEGLKFFGQM 130
F E D ++ S S+ AG + G E +K F +M
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
>TAIR|locus:505006130 [details] [associations]
symbol:AT1G18485 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC013354 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229592 IPI:IPI00532648
PIR:E86318 RefSeq:NP_564054.1 UniGene:At.28671
ProteinModelPortal:Q0WN60 SMR:Q0WN60 PaxDb:Q0WN60 PRIDE:Q0WN60
EnsemblPlants:AT1G18485.1 GeneID:838429 KEGG:ath:AT1G18485
GeneFarm:3163 TAIR:At1g18485 eggNOG:NOG308609 OMA:CVIKACA
PhylomeDB:Q0WN60 ProtClustDB:CLSN2687856 ArrayExpress:Q0WN60
Genevestigator:Q0WN60 Uniprot:Q0WN60
Length = 970
Score = 210 (79.0 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 77/247 (31%), Positives = 122/247 (49%)
Query: 55 DQLPSSSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGC 114
DQ+ SS G + H+ +D L R+G + K ++A + E D I + S+ + C
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDML--GRAGQLDKALRVVA-EEMSEEADVGIWK-SLLSSC 777
Query: 115 GQNGPFDEGLKFFGQML-MAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEK 173
+ + G K ++ + K + ++AG + W + R N K
Sbjct: 778 RIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK--WEDVRKV-RQRMNEMSLRK 834
Query: 174 VADMILMIEPNN-TGAYVI---LIN--EALKDL---LE-RMEQEGYVPDTKEVLLDVEEE 223
A IE N ++V+ ++ E +K L LE ++ + GY PDT V D+ EE
Sbjct: 835 DAGCS-WIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEE 893
Query: 224 QKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDN 283
+K L H E+LAL +G+I T +GTTIRV KNL + K++SK++ RE++VRDN
Sbjct: 894 EKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDN 953
Query: 284 RRFCRHF 290
+RF HF
Sbjct: 954 KRF-HHF 959
>TAIR|locus:2177537 [details] [associations]
symbol:EMB3141 "AT5G50390" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB012248 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00532811
RefSeq:NP_199850.1 UniGene:At.65663 ProteinModelPortal:Q9FK33
SMR:Q9FK33 EnsemblPlants:AT5G50390.1 GeneID:835107
KEGG:ath:AT5G50390 GeneFarm:3443 TAIR:At5g50390 eggNOG:NOG255376
InParanoid:Q9FK33 OMA:PRAMHYA PhylomeDB:Q9FK33 ProtClustDB:PLN03081
Genevestigator:Q9FK33 Uniprot:Q9FK33
Length = 701
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 29/98 (29%), Positives = 60/98 (61%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + + +L+E + + GY + + +L DV+E++++ + YH E+LA+ +G+++TP+ ++
Sbjct: 594 IYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQ 653
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ +N + + +S + REM+VRD RF HF
Sbjct: 654 ITQNHRICKNCHKVVEFISLVTGREMVVRDASRF-HHF 690
Score = 100 (40.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+T N+W LL+ACR+ N+EL VA+ + + P G YV++ N
Sbjct: 492 TTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYN 536
Score = 78 (32.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA----GSTENVWLTLLS 160
IS N++ G +G + +K F +M+ A + H F ++ A G +E W LS
Sbjct: 392 ISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLS 451
Query: 161 ACRVHRNVELAEKVADMILMI 181
VH A A MI ++
Sbjct: 452 MSEVHGIKPRAMHYACMIELL 472
>TAIR|locus:2053659 [details] [associations]
symbol:AT2G15690 "AT2G15690" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC006248 UniGene:At.59377
HOGENOM:HOG000237569 EMBL:AY037247 EMBL:BT005808 IPI:IPI00532516
PIR:B84532 RefSeq:NP_565377.1 UniGene:At.21775
ProteinModelPortal:Q9ZQE5 STRING:Q9ZQE5 PaxDb:Q9ZQE5 PRIDE:Q9ZQE5
EnsemblPlants:AT2G15690.1 GeneID:816062 KEGG:ath:AT2G15690
GeneFarm:3458 TAIR:At2g15690 eggNOG:NOG316395 InParanoid:Q94C14
OMA:GGQRPQY PhylomeDB:Q9ZQE5 ProtClustDB:CLSN2917127
Genevestigator:Q9ZQE5 Uniprot:Q9ZQE5
Length = 579
Score = 202 (76.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPDT+ VL D+++E K+ L YH ERLA+ +GII TP T+ +IKNL + K
Sbjct: 488 YVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIK 547
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKI+ R +IVRDN+RF HF
Sbjct: 548 IMSKIIGRVLIVRDNKRF-HHF 568
Score = 40 (19.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 21/101 (20%), Positives = 37/101 (36%)
Query: 57 LPSSSGGRQVDIHFDGGVDGLRPSRSGSVRKVF-EIMAVRDFLEYCDYAISRNS-----I 110
L S ++V HF P + V +F E ++ D D+ + ++ +
Sbjct: 249 LKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLM 308
Query: 111 TAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGST 151
NG D+ L F +M +K F + A +T
Sbjct: 309 MCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACAT 349
>TAIR|locus:2126352 [details] [associations]
symbol:AT4G37380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161591
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035601 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00520306 PIR:T04732 RefSeq:NP_195454.1 UniGene:At.65465
ProteinModelPortal:Q9SZT8 SMR:Q9SZT8 PaxDb:Q9SZT8 PRIDE:Q9SZT8
EnsemblPlants:AT4G37380.1 GeneID:829892 KEGG:ath:AT4G37380
GeneFarm:3434 TAIR:At4g37380 eggNOG:NOG309820 InParanoid:Q9SZT8
OMA:MITCYAK PhylomeDB:Q9SZT8 ProtClustDB:CLSN2685788
BioCyc:ARA:AT4G37830-MONOMER BioCyc:MetaCyc:AT4G37830-MONOMER
Genevestigator:Q9SZT8 Uniprot:Q9SZT8
Length = 632
Score = 199 (75.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 39/94 (41%), Positives = 60/94 (63%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ + ER++ GYVP+T VL D+EE +K+ L H ERLA+ +G+IST G+ +++ KN
Sbjct: 529 LRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKN 588
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K++SKI R++++RD RF HF
Sbjct: 589 LRVCSDCHTVTKLISKITGRKIVMRDRNRF-HHF 621
Score = 45 (20.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 117 NGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN 153
NG D+ + Q+L ++I FS ++ + ST++
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS 144
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 114 CGQNGPFDEGLKFF---GQMLMAKIKARH--APFSRIMHAGSTENVWLTL 158
C G +EG++ F GQ K K H S + AG + + T+
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
>TAIR|locus:2150936 [details] [associations]
symbol:AT5G15340 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00531606 PIR:T49969 RefSeq:NP_197038.1
UniGene:At.66725 ProteinModelPortal:Q9LXE8 SMR:Q9LXE8 PRIDE:Q9LXE8
EnsemblPlants:AT5G15340.1 GeneID:831386 KEGG:ath:AT5G15340
GeneFarm:3539 TAIR:At5g15340 eggNOG:NOG317118 InParanoid:Q9LXE8
OMA:SEKLAVC PhylomeDB:Q9LXE8 ProtClustDB:CLSN2687457
Genevestigator:Q9LXE8 Uniprot:Q9LXE8
Length = 623
Score = 170 (64.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEE--EQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
L +++ER+ GYVPD ++ E E+K+ L H E+LA+ FG++ T T + V
Sbjct: 518 LNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVF 577
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
KNL R K+VSK+ RE+I+RD RF
Sbjct: 578 KNLRICRDCHSAMKIVSKVYDREIIIRDRNRF 609
Score = 79 (32.9 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
R M E V +LL +C VH VE+AE++ ++ + P NT +++ N
Sbjct: 410 REMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Score = 37 (18.1 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 109 SITAGCGQNGPFDEGLKFF 127
++ + C +G DEG + F
Sbjct: 356 AVLSACSHSGIVDEGWRCF 374
>TAIR|locus:2164880 [details] [associations]
symbol:EMB2744 "EMBRYO DEFECTIVE 2744" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB012243
UniGene:At.19755 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BX832481
IPI:IPI00547786 RefSeq:NP_198784.1 UniGene:At.68250
UniGene:At.70298 ProteinModelPortal:Q9FK93 SMR:Q9FK93 PRIDE:Q9FK93
EnsemblPlants:AT5G39680.1 GeneID:833964 KEGG:ath:AT5G39680
GeneFarm:3361 TAIR:At5g39680 eggNOG:NOG268326 InParanoid:Q9FK93
OMA:RWDGVVK PhylomeDB:Q9FK93 ProtClustDB:CLSN2687498
Genevestigator:Q9FK93 Uniprot:Q9FK93
Length = 710
Score = 188 (71.2 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 38/113 (33%), Positives = 67/113 (59%)
Query: 179 LMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLAL 238
+ + +N + LI +K+++ +++ GY PD DV+EEQ+++ L YH E+LA+
Sbjct: 589 VFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAV 648
Query: 239 VFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
+G+I TP+ + + V KN+ K++SKI R +++RD+ RF HFL
Sbjct: 649 AYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRF-HHFL 700
Score = 103 (41.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W TLL+AC V RN L +KVA+ + PN++G YV+L N
Sbjct: 510 WRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSN 549
Score = 59 (25.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++SGS+ RK F M RD + + N++ +GC +G E L+ F +M+
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTW-------NTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 137 ARHAPFSRIMHAGS 150
F ++ A S
Sbjct: 437 PNRITFIGVLQACS 450
Score = 54 (24.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 90 EIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGL 124
E + V D L YCD ++ ++++ G + G F EGL
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALS-GYLECGAFKEGL 222
Score = 47 (21.6 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFD-EGLKFFGQMLMA 133
RK+F++M R+ + +C A+ + QN FD E LK F M +
Sbjct: 89 RKLFDLMPERNVVSWC--AMMKGY------QNSGFDFEVLKLFKSMFFS 129
Score = 45 (20.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 21/89 (23%), Positives = 34/89 (38%)
Query: 44 IGHYADLDGISDQLPSSSGGRQVDI-HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCD 102
+ YA I D + SG DI ++ + G S G R+ E F
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC--SHHGLGREALEAFDRMIFTGEIP 437
Query: 103 YAISRNSITAGCGQNGPFDEGLKFFGQML 131
I+ + C G ++GL +F Q++
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Score = 38 (18.4 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 114 CGQNGPFDEGLKFFGQML 131
C +G +EG +F G L
Sbjct: 146 CSNSGRIEEGKQFHGCFL 163
>TAIR|locus:2157368 [details] [associations]
symbol:AT5G50990 "AT5G50990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 EMBL:AB017063
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00536858 RefSeq:NP_199912.2 UniGene:At.65858
ProteinModelPortal:Q9FI49 SMR:Q9FI49 PaxDb:Q9FI49 PRIDE:Q9FI49
EnsemblPlants:AT5G50990.1 GeneID:835172 KEGG:ath:AT5G50990
GeneFarm:3452 TAIR:At5g50990 eggNOG:NOG294420 InParanoid:Q9FI49
OMA:RIRFHRF PhylomeDB:Q9FI49 ProtClustDB:CLSN2702263
Genevestigator:Q9FI49 Uniprot:Q9FI49
Length = 534
Score = 187 (70.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 39/96 (40%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L+ L+++ + +G+V DT VL+DV EE+K+ L YH E+LAL + I+ + GT IR
Sbjct: 427 IYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIR 486
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KN+ + K VSK+++R +I+RD RF R
Sbjct: 487 IQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHR 522
Score = 49 (22.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 93 AVRDFLEYCDYAISRNSIT-AG----CGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMH 147
A+R F E +S +SIT G C G +EG ++FG LM++ R + ++ H
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG--LMSR---RFSIQPKLEH 304
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKV 174
G+ ++ L A RV EL E +
Sbjct: 305 YGAMVDL---LGRAGRVKEAYELIESM 328
>TAIR|locus:2032955 [details] [associations]
symbol:AT1G25360 "AT1G25360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC079374 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533539 PIR:E86383 RefSeq:NP_173907.1
UniGene:At.41352 ProteinModelPortal:Q9FRI5 SMR:Q9FRI5
EnsemblPlants:AT1G25360.1 GeneID:839121 KEGG:ath:AT1G25360
GeneFarm:3520 TAIR:At1g25360 eggNOG:NOG253193 InParanoid:Q9FRI5
OMA:EPCDYAF PhylomeDB:Q9FRI5 ProtClustDB:CLSN2682612
Genevestigator:Q9FRI5 Uniprot:Q9FRI5
Length = 790
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 67/226 (29%), Positives = 117/226 (51%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGL----KFFGQMLMAKIK 136
RSG K + +V + L + A ++ +GC +G + G+ K FG L+ +
Sbjct: 566 RSG---KFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG--LIPEHD 620
Query: 137 ARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA 196
+ S MHA + + W + ++ R+ + ++VA + +E T + L+++
Sbjct: 621 GTYMLLSN-MHAATGQ--WEEVARVRKLMRDRGVKKEVACSWIEME---TQVHTFLVDDT 674
Query: 197 -----------LKDLLERMEQEGYVPDTKEVLLDVEEE-QKKNILYYHGERLALVFGIIS 244
L+DL + M + GYVPDT VL DVE + K+++L H E++A+ FG++
Sbjct: 675 SHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMK 734
Query: 245 TPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
P GTTIR+ KNL + + + +S +V R++I+RD +RF HF
Sbjct: 735 LPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRF-HHF 779
>TAIR|locus:2149664 [details] [associations]
symbol:MEF1 "mitochondrial RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016554 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AB025606 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00534535
RefSeq:NP_200075.1 UniGene:At.55507 ProteinModelPortal:Q9LTF4
SMR:Q9LTF4 STRING:Q9LTF4 EnsemblPlants:AT5G52630.1 GeneID:835340
KEGG:ath:AT5G52630 GeneFarm:3327 TAIR:At5g52630 eggNOG:NOG282491
InParanoid:Q9LTF4 OMA:NLGIWNA ProtClustDB:CLSN2686108
Genevestigator:Q9LTF4 Uniprot:Q9LTF4
Length = 588
Score = 190 (71.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 42/96 (43%), Positives = 57/96 (59%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L +L E ME+ GY+ DT VL +V+ ++K + YH ERLA+ FG+I+ P IR
Sbjct: 481 IYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIR 540
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
V+KNL + K +S R +IVRDN RF R
Sbjct: 541 VMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHR 576
Score = 45 (20.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++ C G DEG +F QM ++I+
Sbjct: 323 NVLNACSHAGLVDEGRYYFDQMKESRIE 350
>TAIR|locus:2170548 [details] [associations]
symbol:AT5G40410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AY062639 EMBL:BT008372 IPI:IPI00522697
RefSeq:NP_198857.2 UniGene:At.27281 ProteinModelPortal:Q9FND6
SMR:Q9FND6 PaxDb:Q9FND6 PRIDE:Q9FND6 EnsemblPlants:AT5G40410.1
GeneID:834039 KEGG:ath:AT5G40410 GeneFarm:3374 TAIR:At5g40410
eggNOG:NOG272143 InParanoid:Q9FND6 OMA:GCSYIEH PhylomeDB:Q9FND6
ProtClustDB:CLSN2681656 Genevestigator:Q9FND6 Uniprot:Q9FND6
Length = 608
Score = 147 (56.8 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 193 INEALKDLLERMEQE-GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
I + LK++ ++M+ E GY T+ VL DV E+ K+ ++ H E++A+ FG++ I
Sbjct: 500 IQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPI 559
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
+ KNL K +S I R +I+RD++RF HFL
Sbjct: 560 IIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRF-HHFL 598
Score = 91 (37.1 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+ VW LL ACRV+++ +L K A+ + +EP + YV+L N
Sbjct: 403 SSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSN 446
Score = 40 (19.1 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 93 AVRDFLEYCDYAISRNSITA-----GCGQNGPFDEGLKFFGQM 130
A++ F Y IS + +T C +G +EG +F M
Sbjct: 320 AIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM 362
Score = 38 (18.4 bits), Expect = 8.6e-13, Sum P(3) = 8.6e-13
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
LR K+F+ M RD +S NS+ +G G + + +M+++++
Sbjct: 77 LRLGHDVCAEKLFDEMPERDL-------VSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 137 AR 138
R
Sbjct: 130 FR 131
Score = 38 (18.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
K+FE +++++ +S N++ QNG ++GL +F M++ + H P
Sbjct: 190 KLFEDLSIKNL-------VSWNTMIVIHLQNGLAEKGLAYFN---MSR-RVGHEP----- 233
Query: 147 HAGSTENVWLTLLSACRVHRNVELAEKVADMIL 179
+ +L +L +C V LA+ + +I+
Sbjct: 234 ----DQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
>TAIR|locus:2150690 [details] [associations]
symbol:EMB175 "AT5G03800" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;NAS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL162873 EMBL:AB005235 GO:GO:0009793
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AY864345 EMBL:AY864346 EMBL:AK117204 IPI:IPI00535493
PIR:T48407 RefSeq:NP_196000.2 UniGene:At.63783
ProteinModelPortal:Q9FFN1 SMR:Q9FFN1 EnsemblPlants:AT5G03800.1
GeneID:831717 KEGG:ath:AT5G03800 GeneFarm:3198 TAIR:At5g03800
eggNOG:NOG285897 HOGENOM:HOG000242153 InParanoid:Q9FFN1 OMA:TEMITAY
PhylomeDB:Q9FFN1 ProtClustDB:CLSN2681629 Genevestigator:Q9FFN1
Uniprot:Q9FFN1
Length = 896
Score = 153 (58.9 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 35/100 (35%), Positives = 60/100 (60%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD-GTTI 251
I L+ L+ + GY P+T+ VL +V+E KK+ L++H +LA+ +GI+S+ G +
Sbjct: 788 IYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPV 847
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
RV+KN+ K +S +V RE+++RD+ F HF+
Sbjct: 848 RVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGF-HHFV 886
Score = 83 (34.3 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+V LL +CR+H N +A++VA +IL +P Y++ N
Sbjct: 693 SVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSN 734
Score = 44 (20.5 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
I+ N++ AG +NG + LK F ML ++
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
>TAIR|locus:2025946 [details] [associations]
symbol:CRR28 "CHLORORESPIRATORY REDUCTION28" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
GO:GO:0016556 EMBL:AC007258 Gene3D:1.25.40.10 PROSITE:PS51375
GO:GO:0004519 EMBL:AC009317 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK228565 IPI:IPI00526140
PIR:H96620 RefSeq:NP_176180.1 UniGene:At.11368 UniGene:At.66916
ProteinModelPortal:Q0WQW5 SMR:Q0WQW5 STRING:Q0WQW5 PaxDb:Q0WQW5
PRIDE:Q0WQW5 EnsemblPlants:AT1G59720.1 GeneID:842263
KEGG:ath:AT1G59720 GeneFarm:3437 TAIR:At1g59720 eggNOG:NOG287891
InParanoid:Q0WQW5 OMA:LLDACCK PhylomeDB:Q0WQW5
ProtClustDB:CLSN2679697 ArrayExpress:Q0WQW5 Genevestigator:Q0WQW5
Uniprot:Q0WQW5
Length = 638
Score = 167 (63.8 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 193 INEALKDLLERMEQEGYVPDTKEV-LLDVEEEQKKNI-LYYHGERLALVFGIISTPDGTT 250
I + LK + +R+ GY+PD + L+D + K L H ERLA+ FG+I+ P T
Sbjct: 529 IYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTP 588
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR+ KNL K++SK+ + E+IVRD RF HF
Sbjct: 589 IRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF-HHF 627
Score = 62 (26.9 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 154 VWLTLLSAC-RVHRNVELAEKVADMILMIEPNN-------TGAYVIL 192
+W +LL AC + +VEL+E++A I+ + +N +GAYV+L
Sbjct: 427 IWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLL 473
Score = 50 (22.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 81 RSGSVR---KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA 137
+ GS+R +VF+ M RD + N++ G +G +E + FF +M+ +
Sbjct: 301 KCGSLRMAEQVFQGMQKRDLASW-------NAMILGFATHGRAEEAMNFFDRMVDKRENV 353
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVHRN-VELAEKVADMILM---IEP--NNTGAYVI 191
R P S + G LL AC HR V + DM++ IEP + G V
Sbjct: 354 R--PNS-VTFVG--------LLIACN-HRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
Query: 192 LINEA 196
LI A
Sbjct: 402 LIARA 406
Score = 41 (19.5 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
RKVF+ M R +S NS+ + G +D L+ F +M
Sbjct: 206 RKVFDEMPERSL-------VSWNSMIDALVRFGEYDSALQLFREM 243
>TAIR|locus:2129361 [details] [associations]
symbol:AT4G14050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:Z97335 PROSITE:PS51375
EMBL:AL161537 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:BX840233 IPI:IPI00528310 PIR:B85153
PIR:F71401 RefSeq:NP_193141.2 UniGene:At.49691
ProteinModelPortal:O23266 SMR:O23266 PRIDE:O23266
EnsemblPlants:AT4G14050.1 GeneID:827041 KEGG:ath:AT4G14050
GeneFarm:3176 TAIR:At4g14050 eggNOG:NOG258429 OMA:YSKCSDI
PhylomeDB:O23266 ProtClustDB:CLSN2690293 Genevestigator:O23266
Uniprot:O23266
Length = 612
Score = 191 (72.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 53/193 (27%), Positives = 100/193 (51%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG--STENVWLTLLSACRVHR 166
++ + C + G G++ L++ K + P + I+ + ++ ++W + A R
Sbjct: 412 ALLSACKRQGRGQMGIRI-ADHLVSSFKLKD-PSTYILLSNIYASASLWGKVSEARRKLG 469
Query: 167 NVELAEKVADMILMIEPNNTGAYVILINEALKD----LLERMEQE-----GYVPDTKEVL 217
+E+ + + + Y + LK+ LL+++E+E GYVPDT +L
Sbjct: 470 EMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWIL 529
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++E++K+ +L++H ER A+ +G++ GT IR++KNL K +S+I RE
Sbjct: 530 HDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITERE 589
Query: 278 MIVRDNRRFCRHF 290
+IVRD R+ HF
Sbjct: 590 IIVRDATRY-HHF 601
>TAIR|locus:2196583 [details] [associations]
symbol:ECB2 "EARLY CHLOROPLAST BIOGENESIS2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0040007 GO:GO:0009507 GO:GO:0009658
EMBL:AC013453 GO:GO:0009416 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00522462 PIR:H86288
RefSeq:NP_173004.1 UniGene:At.41931 ProteinModelPortal:Q9M9E2
SMR:Q9M9E2 PRIDE:Q9M9E2 EnsemblPlants:AT1G15510.1 GeneID:838121
KEGG:ath:AT1G15510 GeneFarm:3519 TAIR:At1g15510 eggNOG:NOG295763
InParanoid:Q9M9E2 OMA:FCGHSER PhylomeDB:Q9M9E2 ProtClustDB:PLN03077
ArrayExpress:Q9M9E2 Genevestigator:Q9M9E2 Uniprot:Q9M9E2
Length = 866
Score = 138 (53.6 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 35/98 (35%), Positives = 47/98 (47%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
IN L+ E+M + G ++ +D E + I H ER A+ FG+I+T G I
Sbjct: 761 INTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIW 820
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK V RE+ VRD F HF
Sbjct: 821 VTKNLSMCENCHDTVKFISKTVRREISVRDAEHF-HHF 857
Score = 92 (37.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW LL+ACR+H ++L E A I ++ + G Y++L N
Sbjct: 667 VWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCN 707
Score = 50 (22.7 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
S R +F+ M RD IS N++ +G +NG EGL+ F M
Sbjct: 249 SARLLFDRMPRRDI-------ISWNAMISGYFENGMCHEGLELFFAM 288
Score = 42 (19.8 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 106 SRNSITAGCGQNGPFDEGLKFFGQML 131
S N + G + G FDE + + +ML
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRML 187
Score = 41 (19.5 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
S+ GC ++ +GL +F +M
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKM 624
>TAIR|locus:2057574 [details] [associations]
symbol:AT2G33760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00521080 PIR:C84749 RefSeq:NP_180932.1 UniGene:At.66304
UniGene:At.68773 ProteinModelPortal:P93011 SMR:P93011
EnsemblPlants:AT2G33760.1 GeneID:817942 KEGG:ath:AT2G33760
GeneFarm:3149 TAIR:At2g33760 eggNOG:NOG259057 InParanoid:P93011
OMA:SPSNYTF PhylomeDB:P93011 ProtClustDB:CLSN2683510
Genevestigator:P93011 Uniprot:P93011
Length = 583
Score = 172 (65.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L+ R ++ GY P ++EV+ VEEE+K+ L YH E+LA+ FG++ T D I ++KN
Sbjct: 481 LETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKN 539
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +S + +R++ VRD RF HF
Sbjct: 540 LRICEDCHSAFKYISIVSNRQITVRDKLRF-HHF 572
Score = 59 (25.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
++ NS+ +G QNG DE ++ F QM + + A F ++ A
Sbjct: 174 VAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
>TAIR|locus:2080727 [details] [associations]
symbol:MEF10 "mitochondrial RNA editing factor 10"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008153 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00530970
RefSeq:NP_187753.1 UniGene:At.53270 ProteinModelPortal:Q9CAY1
SMR:Q9CAY1 PaxDb:Q9CAY1 PRIDE:Q9CAY1 EnsemblPlants:AT3G11460.1
GeneID:820319 KEGG:ath:AT3G11460 GeneFarm:3438 TAIR:At3g11460
eggNOG:NOG330951 InParanoid:Q9CAY1 OMA:GLITWNA PhylomeDB:Q9CAY1
ProtClustDB:CLSN2684416 Genevestigator:Q9CAY1 Uniprot:Q9CAY1
Length = 623
Score = 121 (47.7 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 30/65 (46%), Positives = 37/65 (56%)
Query: 232 HGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
H ERLA+ FGI+++ GT I VIKNL K VSKIV R+ +VRD RF H+
Sbjct: 555 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF--HYF 612
Query: 292 LFRAC 296
C
Sbjct: 613 KDGVC 617
Score = 112 (44.5 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW LL AC++H+NV++AE ++ EPNN G YV++ N
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSN 468
Score = 55 (24.4 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGC-GQNGPFDEGLKFFGQMLMAKIKARHAPFSR 144
R VF+IM V+ + + + GC G +G + GL F M+ I+ A F
Sbjct: 312 RAVFDIMPVKSLVSW--------TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 145 IM----HAGSTENVWLTLLSACRVHRNVE 169
++ H+G T+ L L A + +E
Sbjct: 364 VLSACSHSGLTDK-GLELFRAMKREYKLE 391
Score = 44 (20.5 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 81 RSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
+ GSV R++F+ M V+ + + N++ +G QNG + L+ + QM
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITW-------NAVISGYSQNGLAYDVLELYEQM 248
>TAIR|locus:2098901 [details] [associations]
symbol:AT3G61170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL137898 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
UniGene:At.172 IPI:IPI00530191 PIR:T47909 RefSeq:NP_191676.1
UniGene:At.54031 ProteinModelPortal:Q9M2E7 SMR:Q9M2E7 PRIDE:Q9M2E7
EnsemblPlants:AT3G61170.1 GeneID:825289 KEGG:ath:AT3G61170
TAIR:At3g61170 InParanoid:Q9M2E7 OMA:NSMIVGC PhylomeDB:Q9M2E7
ProtClustDB:CLSN2685238 Genevestigator:Q9M2E7 Uniprot:Q9M2E7
Length = 783
Score = 122 (48.0 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I + +++ +++ GY D L D+++E K+ L YH E+LA+ FG++ P G
Sbjct: 657 MVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGA 716
Query: 250 TIRVIKNL 257
IR+IKNL
Sbjct: 717 PIRIIKNL 724
Score = 93 (37.8 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 144 RIMHAGSTE---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+++H E VW +L+A R H N+E E+ A ++ +EPNN YV L N
Sbjct: 553 QLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSN 606
Score = 66 (28.3 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 29/85 (34%), Positives = 38/85 (44%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S KVFE M +D IS ++ G NG +DE LK F M + I +
Sbjct: 382 SALKVFEGMIEKD-------VISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTA 434
Query: 144 RIMHAGSTENVWLTLLS-ACRVHRN 167
++ A S E LTLL +VH N
Sbjct: 435 SVLSA-SAE---LTLLEFGQQVHGN 455
Score = 63 (27.2 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 87 KVFEIMAVRDFLE--YCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
K E+ + R LE D +S NS+ GC + G E L FG+M
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Score = 47 (21.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 17/65 (26%), Positives = 26/65 (40%)
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLL 159
Y Y + N++ + G D LK F M+ + + A + H GS + L L
Sbjct: 360 YATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEA-LKLF 418
Query: 160 SACRV 164
RV
Sbjct: 419 CNMRV 423
Score = 38 (18.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
+F M +RD + + + G +NG ++ ++F M
Sbjct: 487 IFNSMEIRDLITW-------TCLIVGYAKNGLLEDAQRYFDSM 522
>TAIR|locus:2083631 [details] [associations]
symbol:AT3G15130 "AT3G15130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AP001299
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524662
RefSeq:NP_188131.1 UniGene:At.65091 ProteinModelPortal:P0C898
SMR:P0C898 EnsemblPlants:AT3G15130.1 GeneID:820744
KEGG:ath:AT3G15130 GeneFarm:3534 TAIR:At3g15130 eggNOG:NOG277199
OMA:KEVHFFY PhylomeDB:P0C898 ProtClustDB:CLSN2685096
Genevestigator:P0C898 Uniprot:P0C898
Length = 689
Score = 124 (48.7 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 36/99 (36%), Positives = 50/99 (50%)
Query: 192 LINEALKDLLERMEQE-GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIS---TPD 247
+I E LK+ R+ +E GYV K L D+++E K+ L H E+LA+ + +
Sbjct: 577 VIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQK 636
Query: 248 GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
G TIRV KNL K +SKI +VRD RF
Sbjct: 637 GKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRF 675
Score = 102 (41.0 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W TLLS CRVH ++EL ++V ++L I+ N YV++ N
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSN 524
Score = 52 (23.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 42/176 (23%), Positives = 69/176 (39%)
Query: 19 GLAGCNEFMDKANGITDRFEERAVSIGHYA--DLDGISDQLPSSSGGRQVDIHFDGGVDG 76
G A EF++ A G+ R +E I +A + G+ G+Q+ G
Sbjct: 287 GYAQEGEFVE-AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 77 LRPSRSGSVRKVFEIMAVRDFLEYCDYA-------ISRNSITAGCGQNGPFDEGLKFFGQ 129
L S SV ++ + D E C +A IS + G G++G + ++ F +
Sbjct: 346 LETSVLNSVVDMYLKCGLVDEAEKC-FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 130 MLMAKIKARH----APFSRIMHAGST---ENVWLTLLSACRVHRNVELAEKVADMI 178
ML I+ A S H+G E ++ LL + VE V D++
Sbjct: 405 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 460
Score = 49 (22.3 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
IS N++ AG G + L FG M A IK R F+
Sbjct: 174 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFT 212
Score = 39 (18.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM 130
IS +S+ G Q G F E + F ++
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRL 304
>TAIR|locus:2825364 [details] [associations]
symbol:AT1G71420 "AT1G71420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC016163 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK230400 IPI:IPI00539447
RefSeq:NP_177298.1 UniGene:At.51303 ProteinModelPortal:Q9C9H9
SMR:Q9C9H9 EnsemblPlants:AT1G71420.1 GeneID:843483
KEGG:ath:AT1G71420 GeneFarm:3464 TAIR:At1g71420 eggNOG:NOG242517
InParanoid:Q9C9H9 OMA:GSCRKHG PhylomeDB:Q9C9H9
ProtClustDB:CLSN2679244 Genevestigator:Q9C9H9 Uniprot:Q9C9H9
Length = 745
Score = 141 (54.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 34/100 (34%), Positives = 61/100 (61%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVE-EEQKKNILYYHGERLALVFGII----STPDGTT- 250
LK L+ +++ GYVP+ + D+E EEQ+++ L +H E+LAL F ++ S+ G
Sbjct: 636 LKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNL 695
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
I+++KN + K+ SK++ +E+++RD+ RF HF
Sbjct: 696 IQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRF-HHF 734
Score = 88 (36.0 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMIL-MIEPNNTGAYVILIN 194
VW+ LL +CR H N L + AD + ++EP N+ +Y+ + N
Sbjct: 537 VWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSN 578
Score = 49 (22.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 18/82 (21%), Positives = 33/82 (40%)
Query: 98 LEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLT 157
+ +C ++ N I P + + FGQ+ K+ FS ++ A + +T
Sbjct: 329 MSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAG---LVT 384
Query: 158 LLSACRVHRNVELAEKVADMIL 179
A +H V +AD +L
Sbjct: 385 ARHALSIHAQVIKGGFLADTVL 406
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
++ + C G +EGL+ F M
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSM 493
Score = 38 (18.4 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQML 131
R+VF+ M R+ +S ++ G Q G EG F ML
Sbjct: 116 RQVFDTMPERN-------VVSWTALITGYVQAGNEQEGFCLFSSML 154
>TAIR|locus:2079187 [details] [associations]
symbol:AT3G47530 "AT3G47530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL132955
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK221462 IPI:IPI00528158 PIR:T45713 RefSeq:NP_190337.1
UniGene:At.49647 ProteinModelPortal:Q9SN85 SMR:Q9SN85 PaxDb:Q9SN85
PRIDE:Q9SN85 EnsemblPlants:AT3G47530.1 GeneID:823907
KEGG:ath:AT3G47530 GeneFarm:3522 TAIR:At3g47530 eggNOG:NOG247657
InParanoid:Q9SN85 OMA:DSTIWRT PhylomeDB:Q9SN85
ProtClustDB:CLSN2685176 Genevestigator:Q9SN85 Uniprot:Q9SN85
Length = 591
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 71/251 (28%), Positives = 120/251 (47%)
Query: 55 DQLPSSSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGC 114
D++ S + ++H G V L R+ + K + ++ + D I R + A C
Sbjct: 342 DRMRSGEFKIKPNLHHYGCVVDLL-GRARLLDKAYSLIKSMEMKP--DSTIWRTLLGA-C 397
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHA-PFSRIMHAGSTENVW--LT----LLSACRVHRN 167
+G + G + ++ ++KA A + +++ ST W +T L+ R+H
Sbjct: 398 RVHGDVELGERVISHLI--ELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTK 455
Query: 168 -----VELAEKVADMIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDV 220
+EL V + I+ + P Y + L ++ ++++ GYV + L ++
Sbjct: 456 PGCSAIELQGTVHEFIVDDVSHPRKEEIY-----KMLAEINQQLKIAGYVAEITSELHNL 510
Query: 221 EEEQKKNI-LYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
E E++K L YH E+LA+ FGI+ TP GTTIRV KNL + + K VS + R +I
Sbjct: 511 ESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVI 570
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 571 VRDRSRF-HHF 580
>TAIR|locus:2040135 [details] [associations]
symbol:MEF8 "AT2G25580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC006053
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AK175894 IPI:IPI00529047
PIR:B84650 RefSeq:NP_180129.2 UniGene:At.52914
ProteinModelPortal:Q680H3 PRIDE:Q680H3 EnsemblPlants:AT2G25580.1
GeneID:817097 KEGG:ath:AT2G25580 GeneFarm:3521 TAIR:At2g25580
eggNOG:NOG235837 HOGENOM:HOG000115621 InParanoid:Q680H3 OMA:HSERIAF
PhylomeDB:Q680H3 ProtClustDB:CLSN2918900 Genevestigator:Q680H3
Uniprot:Q680H3
Length = 615
Score = 149 (57.5 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 195 EALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
+ L++L M + GYV +T+ L D+++E K+ +L H ER+A ++++ VI
Sbjct: 510 QLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVI 569
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
KNL + K++S IV RE+I RD +RF H + AC
Sbjct: 570 KNLRVCVDCHNALKIMSDIVGREVITRDIKRF--HQMKNGAC 609
Score = 71 (30.1 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEP 183
+VW TL++ RVH N+EL + A+++ ++P
Sbjct: 424 DVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 40 (19.1 bits), Expect = 3.5e-11, Sum P(3) = 3.5e-11
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 3 ANIVILERNENVELSNGLAGCNEFMDKAN 31
+N V+LE N L+N A E M + N
Sbjct: 291 SNHVLLEMYSNCGLANEAASVFEKMSEKN 319
>TAIR|locus:2013079 [details] [associations]
symbol:AT1G19720 "AT1G19720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007797 EMBL:AC024609 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229137 EMBL:AJ006040
IPI:IPI00522498 PIR:C86330 PIR:T52647 RefSeq:NP_173402.2
UniGene:At.16215 ProteinModelPortal:Q9FXH1 SMR:Q9FXH1 PaxDb:Q9FXH1
PRIDE:Q9FXH1 EnsemblPlants:AT1G19720.1 GeneID:838561
KEGG:ath:AT1G19720 GeneFarm:3162 TAIR:At1g19720 eggNOG:NOG325213
InParanoid:Q9FXH1 OMA:TWNIMIS PhylomeDB:Q9FXH1
ProtClustDB:CLSN2680057 Genevestigator:Q9FXH1 Uniprot:Q9FXH1
Length = 894
Score = 122 (48.0 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 180 MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
+I TG L + L L+E+M + D L +EEE ++ H E+ A+
Sbjct: 772 LIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMA 831
Query: 240 FGIISTPDG--TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRH 289
FG+IS+ TTIR++KNL R K VSK ++++ D R C H
Sbjct: 832 FGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTR--CLH 881
Score = 84 (34.6 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
F + M+ S +W + L+ CR+H ++++A A+ + +EP NT I+
Sbjct: 683 FIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIV 733
Score = 51 (23.0 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAK 134
N I AG QNG DE L+ F +M ++
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSR 519
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++SG + R +F M +D + + NS+ G +G + L F QM I
Sbjct: 570 AKSGDIEYSRTIFLGMETKDIITW-------NSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 137 ARHAPFSRIMHA-GSTENV 154
S I+ A G NV
Sbjct: 623 PNRGTLSSIILAHGLMGNV 641
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLM-AKIKARH 139
++G K +E+ I+ N++ +G +NG E + F +M K++
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNT 489
Query: 140 APFSRIMHAGSTEN 153
A ++ I+ AG +N
Sbjct: 490 ATWNLII-AGYIQN 502
Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
KV + ++ + C +S NSI A + G D KFF +M
Sbjct: 201 KVIHSVVIKLGMSSC-LRVS-NSILAVYAKCGELDFATKFFRRM 242
>TAIR|locus:2131631 [details] [associations]
symbol:AT4G35130 "AT4G35130" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 EMBL:AL022023 EMBL:AL161586 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00533040 PIR:T05783 RefSeq:NP_195239.1 UniGene:At.65456
ProteinModelPortal:O49619 SMR:O49619 PRIDE:O49619
EnsemblPlants:AT4G35130.1 GeneID:829665 KEGG:ath:AT4G35130
GeneFarm:3322 TAIR:At4g35130 eggNOG:NOG324832 InParanoid:O49619
OMA:HDNTGCY PhylomeDB:O49619 ProtClustDB:CLSN2685935
Genevestigator:O49619 Uniprot:O49619
Length = 804
Score = 108 (43.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 121 DEGLKFFGQMLMAKIKARHAPFSRI------MHAGSTENVWLTLLSACRVHRNVELAEKV 174
D G++ +G ML + R FS M T +W +LL+A R H+++ +AE
Sbjct: 565 DPGIEHYGCML--DLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622
Query: 175 ADMILMIEPNNTGAYVILIN 194
A+ I +E +NTG YV+L+N
Sbjct: 623 AEQIFKMEHDNTGCYVLLLN 642
Score = 98 (39.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 193 INEALKDLLERM--EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT 250
I E L D++ RM E++ YV + + + + N H RLA FG+IST G
Sbjct: 696 IYEVL-DVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRR 754
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ V N R + S++ RE++V D++ F HF
Sbjct: 755 VTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIF-HHF 793
>TAIR|locus:2183886 [details] [associations]
symbol:RARE1 "REQUIRED FOR ACCD RNA EDITING 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL163491
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546730 PIR:T48574 RefSeq:NP_196831.1
UniGene:At.65509 ProteinModelPortal:Q9LYU9 SMR:Q9LYU9 PaxDb:Q9LYU9
PRIDE:Q9LYU9 EnsemblPlants:AT5G13270.1 GeneID:831168
KEGG:ath:AT5G13270 GeneFarm:3538 TAIR:At5g13270 eggNOG:NOG273627
InParanoid:Q9LYU9 OMA:PDAMSWK PhylomeDB:Q9LYU9
ProtClustDB:CLSN2687008 Genevestigator:Q9LYU9 Uniprot:Q9LYU9
Length = 752
Score = 107 (42.7 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 198 KDLLERMEQ-EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT--IRVI 254
+++ E++++ +G++ + +++ L H ERLA+ FG+IS I+V
Sbjct: 650 QEIYEKLKEFDGFMEGD---MFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVF 706
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL + K VS + E+++RD+RRF HF
Sbjct: 707 KNLRACPDCHEFAKHVSLVTGHEIVIRDSRRF-HHF 741
Score = 83 (34.3 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W LS C H+N+EL E + + ++P +T YV+ N
Sbjct: 559 WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFN 598
Score = 47 (21.6 bits), Expect = 8.2e-08, Sum P(3) = 8.2e-08
Identities = 32/151 (21%), Positives = 66/151 (43%)
Query: 2 IANIVILERNENVELSNGLAGCNEFMDKANGITDRFEERAVSIGHYADLDGISDQLPSSS 61
+ N+ ++ +++ +L+ E MDKA G++ VS Y L +L S S
Sbjct: 50 VENLHLVSLSKHRKLNEAFEFLQE-MDKA-GVS-------VSSYSYQCLFEACRELRSLS 100
Query: 62 GGRQVDIHFDGGVDGLRPSRSGSVRKVF-EIMAVRD----FLEYCDY-AISRNSITAGCG 115
GR + G++ V +++ E ++ D F E + A+SR ++ +
Sbjct: 101 HGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 116 QNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
+ G D+ + F ML + K + ++ ++
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLL 191
Score = 37 (18.1 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 89 FEIMAVRDFLEYCD-YAISRNSITAGCGQNGPFDEGLKFF 127
FE A R F E + +S ++I +G Q F+E +K F
Sbjct: 336 FE-SACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTF 374
>TAIR|locus:2102514 [details] [associations]
symbol:AT3G56550 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL163972
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:DQ446769 IPI:IPI00541669 PIR:T49056 RefSeq:NP_191214.1
UniGene:At.65282 ProteinModelPortal:Q9LXY5 SMR:Q9LXY5
EnsemblPlants:AT3G56550.1 GeneID:824822 KEGG:ath:AT3G56550
GeneFarm:3526 TAIR:At3g56550 eggNOG:NOG269480 InParanoid:Q9LXY5
OMA:CSHQGLV PhylomeDB:Q9LXY5 ProtClustDB:CLSN2684194
Genevestigator:Q9LXY5 Uniprot:Q9LXY5
Length = 581
Score = 138 (53.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 168 VELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVP-DTKEVLLDVEEEQKK 226
+E+ ++V ++ + + A ++ +E L +++ R GY P D+ + +
Sbjct: 451 IEIGDQVHKFVVDDKMHPESA--VIYSE-LGEVINRAILAGYKPEDSNRTAPTLSDRCLG 507
Query: 227 NILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ H E+LA+ +G++ T GTT+R+ KNL R K VSK +RE+IVRD RF
Sbjct: 508 SADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRF 567
Query: 287 CRHF 290
HF
Sbjct: 568 -HHF 570
Score = 46 (21.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
VF M RD L + NS+ G G +G E + FF +M+ + ++ F
Sbjct: 265 VFNGMRKRDVLTW-------NSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 18/69 (26%), Positives = 26/69 (37%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVWLTL 158
AI+ + GC G EG++ F M L +K AG EN L +
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS-LEM 367
Query: 159 LSACRVHRN 167
+ A H +
Sbjct: 368 IYASSCHED 376
>TAIR|locus:2054131 [details] [associations]
symbol:SLO2 "AT2G13600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0010182 "sugar mediated
signaling pathway" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007063
GO:GO:0010182 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 GO:GO:0080156
IPI:IPI00529256 PIR:H84508 RefSeq:NP_178983.1 UniGene:At.52726
ProteinModelPortal:Q9SIT7 SMR:Q9SIT7 EnsemblPlants:AT2G13600.1
GeneID:815845 KEGG:ath:AT2G13600 GeneFarm:3687 TAIR:At2g13600
eggNOG:NOG311224 InParanoid:Q9SIT7 OMA:GFAQHDR PhylomeDB:Q9SIT7
ProtClustDB:CLSN2683340 Genevestigator:Q9SIT7 Uniprot:Q9SIT7
Length = 697
Score = 125 (49.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL+AC+VHRN+ L + VA+ +L +EP+N+G YV+L N
Sbjct: 563 IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603
Score = 61 (26.5 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM- 146
VF M RD C +S N++ G QNG +E L+ F +ML + K H ++
Sbjct: 449 VFRKMMERD----C---VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 147 ---HAGSTE 152
HAG E
Sbjct: 502 ACGHAGFVE 510
Score = 60 (26.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
+S N++ AG QNG +E L F + + H F+ I+ A
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Score = 57 (25.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 93 AVRDFLEYCDY-AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
A R F E D +S NS+ QNGP E L F ML ++++ + ++ A
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Score = 42 (19.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM 130
I+ + + CG G +EG +F M
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSM 519
>TAIR|locus:2159238 [details] [associations]
symbol:AT5G61800 "AT5G61800" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB010069 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520201
RefSeq:NP_200988.1 UniGene:At.49205 ProteinModelPortal:Q9FLS9
SMR:Q9FLS9 EnsemblPlants:AT5G61800.1 GeneID:836302
KEGG:ath:AT5G61800 GeneFarm:4201 TAIR:At5g61800 eggNOG:NOG315848
InParanoid:Q9FLS9 OMA:VYSAMAG PhylomeDB:Q9FLS9
ProtClustDB:CLSN2686946 Genevestigator:Q9FLS9 Uniprot:Q9FLS9
Length = 499
Score = 115 (45.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 149 GSTENV--WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQ 206
G+ E + W LL CR+H N+E+AEK A+ + + P + G Y +++ E + ER E+
Sbjct: 417 GNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMV-EMYANA-ERWEE 474
Query: 207 EGYVPDTKEVLLDVEEEQKKNI 228
V +E++ D +++ KKN+
Sbjct: 475 ---VVKVREII-DRDKKVKKNV 492
Score = 64 (27.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 74 VDGLRPSRS-GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLM 132
+DGL +R R++F+ M +RD +S NS+ +G Q E +K F +M+
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDL-------VSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 133 AKIKARHAPFSRIMHAGSTENVW 155
+K + + A + W
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDW 265
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM 130
S+ GC +G DE F QM
Sbjct: 355 SVLVGCSHSGLVDEARNLFDQM 376
>TAIR|locus:2141171 [details] [associations]
symbol:AT4G21300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161554 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL021960
EMBL:AL031187 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00535848 PIR:T05172 RefSeq:NP_193861.1
UniGene:At.66596 ProteinModelPortal:Q9STE1 SMR:Q9STE1 PRIDE:Q9STE1
EnsemblPlants:AT4G21300.1 GeneID:827878 KEGG:ath:AT4G21300
GeneFarm:3874 TAIR:At4g21300 eggNOG:NOG315457 InParanoid:Q9STE1
OMA:ISGYVLN PhylomeDB:Q9STE1 ProtClustDB:CLSN2685364
Genevestigator:Q9STE1 Uniprot:Q9STE1
Length = 857
Score = 122 (48.0 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW TLL ACR+H+NVELAE + ++ ++P+N+G YV++ N
Sbjct: 714 VWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISN 754
Score = 56 (24.8 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML 131
+S NSI A CG +G + L F +M+
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMV 635
Score = 46 (21.3 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM 130
I + C G DEG++FF M
Sbjct: 650 IISSCCHVGDVDEGVRFFRSM 670
Score = 41 (19.5 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQML 131
NSI + +NG ++ L F+ +ML
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKML 130
Score = 41 (19.5 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 107 RNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTE 152
+NS+ + + G FD+ K F M A + S + +G E
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Score = 39 (18.8 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 193 INEALKDLLERMEQEGYVP 211
I L LL + EGY+P
Sbjct: 808 IYSLLNSLLGELRLEGYIP 826
Score = 37 (18.1 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
++FE ++ RD +S NS+ C Q+ + F QM
Sbjct: 497 EIFERLSKRDI-------VSWNSMITRCAQSDNPSAAIDIFRQM 533
>TAIR|locus:2083961 [details] [associations]
symbol:AT3G53360 "AT3G53360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132966
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00530217 PIR:T45876
RefSeq:NP_190904.1 UniGene:At.53917 ProteinModelPortal:Q9LFI1
SMR:Q9LFI1 PRIDE:Q9LFI1 EnsemblPlants:AT3G53360.1 GeneID:824504
KEGG:ath:AT3G53360 GeneFarm:3704 TAIR:At3g53360 eggNOG:NOG266845
InParanoid:Q9LFI1 OMA:WNSILTA PhylomeDB:Q9LFI1
ProtClustDB:CLSN2684918 Genevestigator:Q9LFI1 Uniprot:Q9LFI1
Length = 768
Score = 110 (43.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
VW TLLSAC+ NV LA+K A+ IL I+P N+ A+V+L
Sbjct: 644 VWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLL 682
Score = 67 (28.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G R++F+ M RD +S +++ G Q+G +E L F +M A I+ H F
Sbjct: 525 GQARRIFDSMDNRD-------VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTF 577
Query: 143 SRIMHAGS 150
++ A S
Sbjct: 578 VGVLTACS 585
Score = 60 (26.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
R+VF+ M R+ + Y S+ G QNG E ++ + +ML + F I
Sbjct: 122 REVFDFMPERNLVSY-------TSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSI 174
Query: 146 MHA-GSTENVWL 156
+ A S+ +V L
Sbjct: 175 IKACASSSDVGL 186
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM 130
S R+VF D +E D A S N I AG NG DE + F QM
Sbjct: 323 SARRVF------DQIERPDTA-SWNVIIAGLANNGYADEAVSVFSQM 362
>TAIR|locus:2040859 [details] [associations]
symbol:AT2G34370 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
EMBL:AC004077 EMBL:AC004481 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 HOGENOM:HOG000237569 EMBL:DQ056566
IPI:IPI00532479 PIR:T02325 RefSeq:NP_180984.1 UniGene:At.53032
ProteinModelPortal:Q8S8Q7 SMR:Q8S8Q7 PRIDE:Q8S8Q7
EnsemblPlants:AT2G34370.1 GeneID:818000 KEGG:ath:AT2G34370
GeneFarm:3234 TAIR:At2g34370 eggNOG:NOG300740 InParanoid:Q8S8Q7
OMA:SVEMWET PhylomeDB:Q8S8Q7 ProtClustDB:CLSN2682015
Genevestigator:Q8S8Q7 Uniprot:Q8S8Q7
Length = 469
Score = 115 (45.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 196 ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
A + L +M G+VP T+ + VEEE+K+ L + +LA II++ + V++
Sbjct: 365 AFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQ 424
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
N+ + + K++S I R +I RD +++ HF C
Sbjct: 425 NMRTCIDGHNTFKMISLITGRALIQRDKKKY--HFYKNGVC 463
Score = 52 (23.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIE 182
+W TL++ C V +EL ++ A++I ++
Sbjct: 279 MWETLMNLCWVQGYLELGDRFAELIKKLD 307
>TAIR|locus:2175653 [details] [associations]
symbol:AT5G39350 "AT5G39350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009054 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00525121 RefSeq:NP_198751.1
UniGene:At.55251 ProteinModelPortal:Q9FLZ9 SMR:Q9FLZ9
EnsemblPlants:AT5G39350.1 GeneID:833931 KEGG:ath:AT5G39350
GeneFarm:4040 TAIR:At5g39350 eggNOG:NOG328150 InParanoid:Q9FLZ9
OMA:LLAMYMN PhylomeDB:Q9FLZ9 ProtClustDB:CLSN2687317
Genevestigator:Q9FLZ9 Uniprot:Q9FLZ9
Length = 677
Score = 118 (46.6 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
T VW LL+AC H NV+L E A+ + +EP NTG YV+L N
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLAN 635
Score = 46 (21.3 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 93 AVRDFLEYCDYAISRNSITA-----GCGQNGPFDEGLKFFGQML 131
A++ F+E ++ N IT C +G +EGL F ML
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML 552
Score = 44 (20.5 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
++I AGC QN + L F +M ++ A + ++ A
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Score = 43 (20.2 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 12 ENVELSNGLAG----CNEFMDKANGITDRFEERAV 42
+ +E+ N L C MD+A + DR E R V
Sbjct: 251 DKIEVKNALVNMYLKCGR-MDEARFVFDRMERRDV 284
>TAIR|locus:2013738 [details] [associations]
symbol:AT1G29710 "AT1G29710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 PROSITE:PS51375
EMBL:AC068667 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
ProtClustDB:CLSN2682015 EMBL:AC079288 IPI:IPI00537169 PIR:E86420
RefSeq:NP_174264.1 UniGene:At.40680 ProteinModelPortal:Q9C6G2
PaxDb:Q9C6G2 PRIDE:Q9C6G2 ProMEX:Q9C6G2 EnsemblPlants:AT1G29710.1
GeneID:839848 KEGG:ath:AT1G29710 GeneFarm:3459 TAIR:At1g29710
eggNOG:NOG250214 InParanoid:Q9C6G2 OMA:HECIIAL PhylomeDB:Q9C6G2
Genevestigator:Q9C6G2 Uniprot:Q9C6G2
Length = 475
Score = 101 (40.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVL-LDVEEEQKKNILYYHGERLALVFGIISTPDGTT 250
+I E L L ++++ GYVPDT+ L + E K+ I Y E +A+V ++ + +
Sbjct: 367 IIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYR-EEIAVVESLLKSKPRSA 425
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
I ++ N+ + K++S I R+MI RD
Sbjct: 426 ITLLTNIRIVGDCHDMMKLMSVITGRDMIKRD 457
Score = 66 (28.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMI 178
+VW TL++ RVH +VEL ++ A+++
Sbjct: 289 DVWETLMNLSRVHGDVELGDRCAELV 314
>TAIR|locus:2195296 [details] [associations]
symbol:AT1G09190 "AT1G09190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC003114 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
EMBL:BT003981 IPI:IPI00534482 PIR:E86224 RefSeq:NP_172391.2
UniGene:At.42236 ProteinModelPortal:O80488
EnsemblPlants:AT1G09190.1 GeneID:837439 KEGG:ath:AT1G09190
GeneFarm:3632 TAIR:At1g09190 eggNOG:NOG278020 InParanoid:O80488
OMA:YNTLITA PhylomeDB:O80488 ProtClustDB:CLSN2708431
Genevestigator:O80488 Uniprot:O80488
Length = 484
Score = 113 (44.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F + M + +W +LLSACR H +V+LAE A ++ IEP N+G YV+L N
Sbjct: 395 FLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSN 447
Score = 52 (23.4 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHA 140
R G +KVF+ M+ R+ + + N + G +G + GL F QM I + ++
Sbjct: 152 RMGDAQKVFDEMSERNVVVW-------NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNS 204
Query: 141 PFSRIMHAG 149
S + G
Sbjct: 205 MISSLSKCG 213
Score = 46 (21.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIM 146
+S N++ +G NG + G+ F M+ K+ A F ++
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Score = 43 (20.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMA-KIKAR 138
+ A C G + G + FG M+ K++AR
Sbjct: 343 VLACCSYTGQVERGEELFGLMMERFKLEAR 372
>TAIR|locus:2007888 [details] [associations]
symbol:AT1G17630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022492 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00541865 RefSeq:NP_173207.1 UniGene:At.51653
ProteinModelPortal:Q9LNP2 SMR:Q9LNP2 PaxDb:Q9LNP2 PRIDE:Q9LNP2
EnsemblPlants:AT1G17630.1 GeneID:838340 KEGG:ath:AT1G17630
GeneFarm:3636 TAIR:At1g17630 eggNOG:NOG260559 InParanoid:Q9LNP2
OMA:REIHGHV PhylomeDB:Q9LNP2 ProtClustDB:CLSN2682102
Genevestigator:Q9LNP2 Uniprot:Q9LNP2
Length = 731
Score = 108 (43.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
LL++CR+H+NV++AE +A + ++EP TG+Y++L N
Sbjct: 609 LLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSN 645
Score = 59 (25.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA 137
++ S+ GC G D+ L++F QM +K+ A
Sbjct: 400 VTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Score = 53 (23.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK----ARHAPFSRIMHAGSTE 152
IS NSI G G +G ++ L F +M+ + A A S HAG E
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
>TAIR|locus:2064828 [details] [associations]
symbol:AT2G40720 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00544227 PIR:A84833 RefSeq:NP_181604.1
UniGene:At.42919 UniGene:At.42920 ProteinModelPortal:Q7XJN6
SMR:Q7XJN6 EnsemblPlants:AT2G40720.1 GeneID:818667
KEGG:ath:AT2G40720 GeneFarm:3676 TAIR:At2g40720 eggNOG:NOG275300
InParanoid:Q7XJN6 OMA:MYVKCGF PhylomeDB:Q7XJN6
ProtClustDB:CLSN2683637 Genevestigator:Q7XJN6 Uniprot:Q7XJN6
Length = 860
Score = 107 (42.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---EA-L 197
F + M + ++WL LLSA R H NVEL A+ +L +EP YV LIN EA L
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795
Query: 198 KD----LLERMEQEG 208
K+ LL M+++G
Sbjct: 796 KNEAAKLLGLMKEKG 810
Score = 56 (24.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM 130
++ S+ +G +NG F E LK FG M
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDM 465
>TAIR|locus:2019130 [details] [associations]
symbol:OTP87 "organelle transcript processing 87"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0080156 "mitochondrial mRNA modification" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00548519 PIR:B96775
RefSeq:NP_177599.1 UniGene:At.34861 ProteinModelPortal:Q9CA56
SMR:Q9CA56 PRIDE:Q9CA56 EnsemblPlants:AT1G74600.1 GeneID:843800
KEGG:ath:AT1G74600 GeneFarm:3629 TAIR:At1g74600 eggNOG:NOG278390
HOGENOM:HOG000243138 InParanoid:Q9CA56 OMA:SYAQHGK PhylomeDB:Q9CA56
ProtClustDB:CLSN2682261 ArrayExpress:Q9CA56 Genevestigator:Q9CA56
GO:GO:0080156 Uniprot:Q9CA56
Length = 895
Score = 109 (43.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
F MH VW TLL+AC++H VEL + A + +EP++ GAY+ L N
Sbjct: 811 FINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSN 863
Score = 52 (23.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
S+ GS++ ++ D L D +S +S+ +G Q+G +G F M+M+
Sbjct: 597 SKCGSLKLARQVY---DRLPELD-PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Query: 140 APFSRIMHAGS 150
S I+ A +
Sbjct: 653 FAISSILKAAA 663
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 296 296 0.00093 115 3 11 22 0.50 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 85
No. of states in DFA: 596 (63 KB)
Total size of DFA: 194 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.42u 0.16s 27.58t Elapsed: 00:00:01
Total cpu time: 27.44u 0.16s 27.60t Elapsed: 00:00:02
Start: Mon May 20 18:27:40 2013 End: Mon May 20 18:27:42 2013