BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044945
(296 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 126/257 (49%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML----MAKIKARHAPFSRI----------------MHA 148
++ C G DE K+F M +A +A S + MH
Sbjct: 439 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 498
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
G T ++W TLLSACRVH+N+++AEKVA+ IL ++PNNTGAY++L N
Sbjct: 499 GPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKW 558
Query: 195 -------------------------------------EALKDLLE----RMEQEGYVPDT 213
E +++ +E ME+EGYVPDT
Sbjct: 559 RASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDT 618
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
EV DVEEEQKK ++ H ERLA+VFGII+TP G TIRV KNL K +SKI
Sbjct: 619 SEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKI 678
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++VRDN RF HF
Sbjct: 679 VGREIVVRDNSRF-HHF 694
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 75/167 (44%), Gaps = 26/167 (15%)
Query: 78 RPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA 137
+ +R +VF ++ RD IS NSI AGC QNG FDEGL+FF QMLMAKIK
Sbjct: 286 KCTRVADSCRVFTLLTERD-------GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKP 338
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVH---------RNVELAEKVADMILMIEPNNTGA 188
+ FS IM A + TL ++H N+ +A + DM N A
Sbjct: 339 KSYSFSSIMPACAHLT---TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC-GNIRTA 394
Query: 189 YVILINEALKDLLERMEQ------EGYVPDTKEVLLDVEEEQKKNIL 229
I L+D++ G PD E+ +E E K +L
Sbjct: 395 KQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKAVL 441
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 125/257 (48%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML----MAKIKARHAPFSRI----------------MHA 148
++ C G DE K+F M +A +A S + MH
Sbjct: 446 AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHI 505
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
G T ++W TLLSACRVH N+++AEKVA+ IL ++PNNTGAY++L N
Sbjct: 506 GPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKW 565
Query: 195 -------------------------------------EALKDLLE----RMEQEGYVPDT 213
E +++ +E ME+EGYVPDT
Sbjct: 566 RASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDT 625
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
EV DVEEEQKK ++ H ERLA+VFGII+TP G TIRV KNL K +SKI
Sbjct: 626 SEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKI 685
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++VRDN RF HF
Sbjct: 686 VGREIVVRDNSRF-HHF 701
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 78 RPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA 137
+ +R +VF ++ RD IS NSI AGC QNG FDEGL+FF QMLMAKIK
Sbjct: 286 KCTRVADSCRVFTLLTERD-------GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKP 338
Query: 138 RHAPFSRIMHA 148
+ FS IM A
Sbjct: 339 KSYSFSSIMPA 349
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 125/257 (48%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM----AKIKARHAPFSRI----------------MHA 148
++ C G DE K+F M + A +A S + M
Sbjct: 507 AVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPI 566
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
G T +VW TLLSACRVH+NV++AEKVA+ IL ++P NTGAY++L N
Sbjct: 567 GPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKW 626
Query: 195 -------------------------------------EALKDLLE----RMEQEGYVPDT 213
E +++ +E ME+EGYVPDT
Sbjct: 627 RASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDT 686
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
EV DVEEEQKK ++ H ERLA+VFGII+TP GTTIRV KNL K +SKI
Sbjct: 687 SEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKI 746
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++VRDN RF HF
Sbjct: 747 VGREIVVRDNSRF-HHF 762
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 40/62 (64%), Gaps = 7/62 (11%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
+VF ++ RD IS NSI AGC QNG FDEGLKFF QMLMAKIK + FS IM
Sbjct: 356 RVFTLLTERD-------GISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIM 408
Query: 147 HA 148
A
Sbjct: 409 PA 410
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 129/278 (46%), Gaps = 79/278 (28%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM----------------- 130
+FE M V D ++ C A ++ C G DEG K+F M
Sbjct: 390 LFEEMLV-DGVKPCYVAFM--AVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVA 446
Query: 131 -LMAKIKARHAPFSRIMHAG--STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
L+ + + I + G T +VW TLL+ACR H+N+ELAEKV + IL+++P N G
Sbjct: 447 DLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMG 506
Query: 188 AYVILIN-----EALKD---LLERMEQEG------------------------------- 208
A+VI+ N + +D L RM + G
Sbjct: 507 AHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDK 566
Query: 209 ----------------YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
YV DT EVL DV+EE K+++L H ERLA+ FGIIST GTTIR
Sbjct: 567 INEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIR 626
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKN+ K ++KIV RE+IVRDN RF HF
Sbjct: 627 VIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRF-HHF 663
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 89 FEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
F +++ RD AIS NSI AGC QNG FD+GL FF +ML K+K FS ++ A
Sbjct: 257 FHLLSNRD-------AISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPA 309
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 140/307 (45%), Gaps = 74/307 (24%)
Query: 41 AVSIGHY--ADLDGISDQLPSSSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFL 98
A+ +G + A +D ++ S G +D++F+ G + ++R +F M RD
Sbjct: 305 ALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCG------NVEKAIR-IFNAMPHRD-- 355
Query: 99 EYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTL 158
IS ++ G NG +E L F QML A I + M VW +L
Sbjct: 356 -----KISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV--IKNMPVKPNSIVWGSL 408
Query: 159 LSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------EALKDLLER--- 203
L ACRVHR+ E+AE A IL +EP N YV+L N E K +++R
Sbjct: 409 LGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIK 468
Query: 204 ----------------------------------------MEQEGYVPDTKEVLLDVEEE 223
++ GY PDT EV LD+ EE
Sbjct: 469 KTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEE 528
Query: 224 QKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDN 283
+K++ +Y H E+LA+ FG+IS+ G TIR++KNL + K+VSK+ +RE+IVRD
Sbjct: 529 EKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDR 588
Query: 284 RRFCRHF 290
RF HF
Sbjct: 589 TRF-HHF 594
>gi|296082479|emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 131/269 (48%), Gaps = 70/269 (26%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++SGS+ R VF + + + I+ S+ Q+G +E L F +ML +
Sbjct: 323 AKSGSINDARWVF------NLIHWKRDTITWTSMIIALAQHGLGEEALTLFERML----E 372
Query: 137 ARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-- 194
HA F M W +LL++C+VH+NVELAE A+ +L+IEP N+GAY L N
Sbjct: 373 NAHA-FIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVY 431
Query: 195 -------------------------------------------------EALKDLLERME 205
+A+ +++ ++
Sbjct: 432 SACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIW 491
Query: 206 QE----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLR 261
+E G+VPDT+ VL D+EEE K+ IL +H E+LA+ FG+I TP+ TT+R++KNL
Sbjct: 492 KEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCN 551
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+V RE+IVRD RF HF
Sbjct: 552 DCHSAIKFISKLVGREIIVRDATRF-HHF 579
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 117/224 (52%), Gaps = 41/224 (18%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAP---FSR----------I 145
A++ I C G ++G K+F M ++ +I+ FSR I
Sbjct: 346 AVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFI 405
Query: 146 MHAGSTEN--VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
M+ N VW LL C+VH+NV+LAE+ + ++P N G YV+L N
Sbjct: 406 MNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWE 465
Query: 195 ------EALKD------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
+ ++D LL+RM+ +GYVP+T VLLD+EE+QK+ LY H E+LA+VFG+
Sbjct: 466 DVARVRKLMRDRGTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGL 525
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
I T GT IR++KNL K++S + RE++VRD RF
Sbjct: 526 IKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRF 569
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ + Y INEALK LLE+ME+EGYV DT EVL DVEEEQK+ +L H ERLA+ FGII
Sbjct: 528 DKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGII 587
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
STP GTTIRV KNL K +SKIV RE++VRDN RF HF
Sbjct: 588 STPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRF-HHF 633
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 20/106 (18%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
++ C G DE K+F M L+ ++ + I MH
Sbjct: 378 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 437
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
T +VW TLL+ACRVH+N+ELAEKV+ + ++P N GAYV+L N
Sbjct: 438 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 483
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 33/44 (75%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
IS NSI AGC QNG FDEGLKFF QML+AKIK H FS IM A
Sbjct: 303 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ + Y INEALK LLE+ME+EGYV DT EVL DVEEEQK+ +L H ERLA+ FGII
Sbjct: 593 DKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGII 652
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
STP GTTIRV KNL K +SKIV RE++VRDN RF HF
Sbjct: 653 STPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRF-HHF 698
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 20/106 (18%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
++ C G DE K+F M L+ ++ + I MH
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 502
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
T +VW TLL+ACRVH+N+ELAEKV+ + ++P N GAYV+L N
Sbjct: 503 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 548
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 33/44 (75%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
IS NSI AGC QNG FDEGLKFF QML+AKIK H FS IM A
Sbjct: 303 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 346
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 116/258 (44%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM---------------------LMAKIKARHAPFSRIMH 147
++ C G DEG ++F M +++ + S +
Sbjct: 434 AVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRG 493
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVAD------------MILM--------------- 180
T +VW LL+ACR H++VELAEKV D +LM
Sbjct: 494 VQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAAR 553
Query: 181 ------------------IEPNN----------TGAYVILINEALKDLLERMEQEGYVPD 212
IE N + Y IN+AL LLE+ME+EGYV D
Sbjct: 554 LRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVID 613
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T +VL DV+EE K+ +L+ H ERLA+ +GIIST GTTIRVIKN+ K ++K
Sbjct: 614 TNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFITK 673
Query: 273 IVHREMIVRDNRRFCRHF 290
IV RE+ VRDN RF HF
Sbjct: 674 IVGREITVRDNSRF-HHF 690
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
AIS NSI AGC QNG FD GL FF +ML +K FS ++ A
Sbjct: 293 AISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPA 337
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 113/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAP------FSRIMHA 148
++ C G D+G K+F M +A R F M
Sbjct: 380 AVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKI 439
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
T +VW TLL AC+VH+N LAE+VA I +EP + G+++IL N
Sbjct: 440 KPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHL 499
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E + D L ++ GYVP+T
Sbjct: 500 RKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNT 559
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+V D+EEEQK ++L H E+LA+VFGIISTP GTTIRV+KNL K +SKI
Sbjct: 560 DDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKI 619
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+++RD RF HF
Sbjct: 620 VGREIVMRDANRF-HHF 635
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
+R+ KVF+ + VRD AI NS+ AGC QNG DE L F +ML + IK
Sbjct: 222 TRTDYSVKVFDNLPVRD-------AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMP 274
Query: 140 APFSRIMHA 148
FS ++ A
Sbjct: 275 VTFSSLIPA 283
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
W +LLSACRVH+N++L + A+ +L++EP N+GAY L N +++K
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D + + +++ GYVPDT VL
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLH 704
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE K+ IL +H E+LA+ FG+ISTPD TT+R++KNL K +SK+V RE+
Sbjct: 705 DLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREI 764
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 765 IVRDTTRF-HHF 775
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 117/261 (44%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------R 144
I+ + + C G +EG +++ Q+ M + AR FS R
Sbjct: 428 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 487
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M W +LLSACRVH+N ELAE A+ +L I+PNN+GAY + N
Sbjct: 488 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 547
Query: 195 -----------------------------------------EALKDLLERMEQE----GY 209
+A+ + RM +E G+
Sbjct: 548 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGF 607
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD + VL DV++E K+ +L H E+LA+ FG+ISTP+ TT+RV+KNL K
Sbjct: 608 VPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKA 667
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD RF HF
Sbjct: 668 ISKVTDREIIVRDATRF-HHF 687
>gi|356515240|ref|XP_003526309.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 560
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 93/167 (55%), Gaps = 23/167 (13%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE---------- 195
M E+VW LLSACR+HRNV+LA A + + P+ +YV L N
Sbjct: 384 MKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSSYVCLSNTEMMVHQFFVG 443
Query: 196 ------------ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
LKDL E++++ GY PDT VL DVEEE K+ +L+ H ERLAL F +I
Sbjct: 444 DTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALI 503
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+T GTTIR+ KNL K++S++ +RE+I+RD RF HF
Sbjct: 504 NTGPGTTIRITKNLCVCGDCHTVIKMISRLTNREIIMRDICRF-HHF 549
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 117/261 (44%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------R 144
I+ + + C G +EG +++ Q+ M + AR FS R
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M W +LLSACRVH+N ELAE A+ +L I+PNN+GAY + N
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 195 -----------------------------------------EALKDLLERMEQE----GY 209
+A+ + RM +E G+
Sbjct: 654 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGF 713
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD + VL DV++E K+ +L H E+LA+ FG+ISTP+ TT+RV+KNL K
Sbjct: 714 VPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKA 773
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD RF HF
Sbjct: 774 ISKVTDREIIVRDATRF-HHF 793
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 117/261 (44%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------R 144
I+ + + C G +EG +++ Q+ M + AR FS R
Sbjct: 534 ITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIR 593
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M W +LLSACRVH+N ELAE A+ +L I+PNN+GAY + N
Sbjct: 594 RMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSD 653
Query: 195 -----------------------------------------EALKDLLERMEQE----GY 209
+A+ + RM +E G+
Sbjct: 654 AARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGF 713
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD + VL DV++E K+ +L H E+LA+ FG+ISTP+ TT+RV+KNL K
Sbjct: 714 VPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKA 773
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD RF HF
Sbjct: 774 ISKVTDREIIVRDATRF-HHF 793
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 96/192 (50%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------LINEA-------- 196
W +LL ACR+H+NVEL E A +L +EPN YV+ L N+A
Sbjct: 495 AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 554
Query: 197 --------------------------------------LKDLLERMEQEGYVPDTKEVLL 218
L+ L E+M +EGYVPDT VL
Sbjct: 555 QMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLH 614
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+V+E++K+N+L H E+LA+ FGI++TP GTTIRV KNL K +SKI+ RE+
Sbjct: 615 NVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREI 674
Query: 279 IVRDNRRFCRHF 290
IVRD RRF HF
Sbjct: 675 IVRDVRRF-HHF 685
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 96/192 (50%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------LINEA-------- 196
W +LL ACR+H+NVEL E A +L +EPN YV+ L N+A
Sbjct: 695 AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 754
Query: 197 --------------------------------------LKDLLERMEQEGYVPDTKEVLL 218
L+ L E+M +EGYVPDT VL
Sbjct: 755 QMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLH 814
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+V+E++K+N+L H E+LA+ FGI++TP GTTIRV KNL K +SKI+ RE+
Sbjct: 815 NVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREI 874
Query: 279 IVRDNRRFCRHF 290
IVRD RRF HF
Sbjct: 875 IVRDVRRF-HHF 885
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------------- 194
W +LL++C+VH+NVELAE A+ +L+IEP N+GAY L N
Sbjct: 585 WGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKD 644
Query: 195 -------------------------------EALKDLLERMEQE----GYVPDTKEVLLD 219
+A+ +++ ++ +E G+VPDT+ VL D
Sbjct: 645 KGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHD 704
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
+EEE K+ IL +H E+LA+ FG+I TP+ TT+R++KNL K +SK+V RE+I
Sbjct: 705 LEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREII 764
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 765 VRDATRF-HHF 774
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 114/258 (44%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------------MAKIKARHAPFSRIMH 147
++ A C +G DEGL F +M K++ + + +
Sbjct: 547 ALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPS 606
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
W +LL ACR++ N+E+ E A+ +L ++P+ YV+L N
Sbjct: 607 GFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMN 666
Query: 195 --------------------------------------EALKDLLE----RMEQEGYVPD 212
E L D LE R+++EGYVPD
Sbjct: 667 LRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPD 726
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL D++EE+K+ IL H E+LA+ FGI++TP GTTIRV KNL +K +SK
Sbjct: 727 TACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISK 786
Query: 273 IVHREMIVRDNRRFCRHF 290
I RE+I+RD RRF HF
Sbjct: 787 IEDREIILRDARRF-HHF 803
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 115/261 (44%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSR 144
I+ S+ + C G DEG K + M M + R F
Sbjct: 42 ITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIE 101
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M +VW L +CR+H N+EL E+VA+++L ++P+N G YV+L N
Sbjct: 102 KMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDD 161
Query: 195 -----------------------------------------EALKDLLE----RMEQEGY 209
EA+ +LE +ME GY
Sbjct: 162 VAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAVGY 221
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP T VL DVEEE K+N+L+ H E+LA+ FG+IST GT+IR+ KNL K
Sbjct: 222 VPCTDFVLHDVEEEIKENMLFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSATKF 281
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE+I+RD RF HF
Sbjct: 282 ISKIVKREIIMRDLNRF-HHF 301
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 111/261 (42%), Gaps = 86/261 (32%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN---------------- 153
+ + C G DEG KFF M ARH I H G +
Sbjct: 370 VLSACTHTGMVDEGKKFFASM-----TARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIK 424
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
VW LL ACR+H++ E+AE+ + IL +EPNN YV+ N +
Sbjct: 425 NMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDK 484
Query: 197 LKDL-------------------------------------------LERMEQE----GY 209
L++L L +M + GY
Sbjct: 485 LRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGY 544
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+T EV LD+ EE K+N +Y H E+LA+ FG+I++ G TIR++KNL H K+
Sbjct: 545 SPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKL 604
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VSK+ RE+IVRD RF HF
Sbjct: 605 VSKVYDREVIVRDRTRF-HHF 624
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 99/192 (51%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALK 198
W +LLSACRV++N++L + A+ +L++EP N+GAY L I +++K
Sbjct: 585 TWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D + + +++ GYVPDT VL
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLH 704
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE K+ IL +H E+LA+ FG+ISTPD TT+R++KNL K +SK+V RE+
Sbjct: 705 DLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREI 764
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 765 IVRDTTRF-HHF 775
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 147/361 (40%), Gaps = 132/361 (36%)
Query: 54 SDQLPSSSGGRQVDIHFDGGVDGLRPS----------RSGSV---RKVFEIM-AVRDFLE 99
S + S + G+Q+ + L PS ++GS+ RKVF ++ RD
Sbjct: 384 SSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRD--- 440
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF----SRIMHAGSTEN-- 153
+S S+ Q+G +E ++ F QML IK H + S H G E
Sbjct: 441 ----TVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGR 496
Query: 154 -------------------------------------------------VWLTLLSACRV 164
W +LLS+C+V
Sbjct: 497 SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV 556
Query: 165 HRNVELAEKVADMILMIEPNNTGAYVILIN------------------------------ 194
++NV+LA+ A+ +L+IEPNN+GAY L N
Sbjct: 557 YKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLS 616
Query: 195 ---------------------EALKDLLERMEQE----GYVPDTKEVLLDVEEEQKKNIL 229
+ + +++++ +E G+ PDT+ VL D+E E K IL
Sbjct: 617 WVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQIL 676
Query: 230 YYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRH 289
YH E+LA+ FGIISTP+ TT+R++KNL + K +SK+V RE+IVRD RF H
Sbjct: 677 RYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRF-HH 735
Query: 290 F 290
F
Sbjct: 736 F 736
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 127/318 (39%), Gaps = 118/318 (37%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
GS +VFE MA D +S ++ +G QNG +E L++F L + IK H F
Sbjct: 321 GSAVRVFEAMAKPDL-------VSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTF 373
Query: 143 ----SRIMHAGSTEN--------------------------------------------- 153
S HAG +
Sbjct: 374 VGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMA 433
Query: 154 ------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA------------------- 188
+W +LL CR+H+NV LA + A+ + IEP N
Sbjct: 434 VKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVED 493
Query: 189 -------------------------YVILINEA-----------LKDLLERMEQEGYVPD 212
+V L+ + LK L +M +EGYV D
Sbjct: 494 VRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVAD 553
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
+ VL DVE+EQK+ + YH ERLA+ FGII+TP+G+ I+V KNL K++S+
Sbjct: 554 IEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQ 613
Query: 273 IVHREMIVRDNRRFCRHF 290
IV R++IVRD+ RF HF
Sbjct: 614 IVQRDIIVRDSNRF-HHF 630
>gi|296089328|emb|CBI39100.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 130/288 (45%), Gaps = 85/288 (29%)
Query: 80 SRSGSVRK---VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
+R GS+ K VFE + RD L + ++ AG +G + LK+F M+ A +
Sbjct: 193 ARCGSIDKAVWVFEDLPERDTLSW-------TALIAGLAMHGYSERSLKYFATMVEAGLT 245
Query: 137 ARHAPFSRIM----HAGSTEN---------------VWLTLLSACRVHRNVELAEKVADM 177
R F+ ++ H G E VW LL ACR+H+N E+ E+V +
Sbjct: 246 PRDITFTAVLSACSHGGLLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKI 305
Query: 178 ILMIEPNNTGAYVILIN--------------------EALK------------------- 198
++ + P ++G YV+L N + LK
Sbjct: 306 LIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTI 365
Query: 199 --------DLLERMEQE--------GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
D +ERM +E GY +T + L D++EE+K++ L+ H E+LA+ FG+
Sbjct: 366 GDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGM 425
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ + GT IR++KNL K++SK+ RE+IVRD RF HF
Sbjct: 426 MRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRF-HHF 472
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 94/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EALKDL-------- 200
VW +LL ACRVH+NV+LAE A+ IL +EP N YV+L N + K+L
Sbjct: 543 VWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMM 602
Query: 201 --------------------------------------LERMEQE----GYVPDTKEVLL 218
LE M+Q+ GY PDT EV L
Sbjct: 603 ERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFL 662
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DV EE K+ LY H E+LA+ + +IS+ G TIR++KNL H VVSK+ +RE+
Sbjct: 663 DVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMAMVVSKVYNREL 722
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 723 IVRDKTRF-HHF 733
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 108/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHA 148
S+ C G D+GL+ F M M + R + M
Sbjct: 308 SLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEV 367
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
E +W L ACR+HR V+LAEK A ++L ++ N G Y++L N
Sbjct: 368 EKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKI 427
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
+ ++L+ + Q+ GYVPDT
Sbjct: 428 RNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDT 487
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL DV+EE K IL+ H E+LA+ FG+I+TPDGT IR+ KNL K+VS I
Sbjct: 488 NSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAI 547
Query: 274 VHREMIVRDNRRFCRHF 290
R++IVRD RF HF
Sbjct: 548 TQRDIIVRDANRF-HHF 563
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 112/258 (43%), Gaps = 78/258 (30%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAP------FSRIMHA 148
++ C G D+G K+F M +A R F M
Sbjct: 377 AVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQI 436
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------INEALKD 199
T +VW TLL ACRVH+N LAE+VA I+ +EP + G++V+L NEA
Sbjct: 437 KPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA-AH 495
Query: 200 LLERMEQEG-----------------------------------------------YVPD 212
L E M ++G +VP+
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T++V D+EEE K +L H E+LA+VFGIISTP GT IRV+KNL K +SK
Sbjct: 556 TEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISK 615
Query: 273 IVHREMIVRDNRRFCRHF 290
+ RE++VRD RF HF
Sbjct: 616 LADREIVVRDANRF-HHF 632
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
+R+ KVF+ + VRD + + NS+ AGC QNG +E L F +ML A ++
Sbjct: 219 TRTDYSVKVFDNLPVRDHILW-------NSLLAGCAQNGSVEEALGIFRRMLQAGVRPVP 271
Query: 140 APFSRIM 146
FS ++
Sbjct: 272 VTFSSLI 278
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 112/249 (44%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY IS S GC G+ G F+E M ++K A +W
Sbjct: 492 DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM---EVKPDGA-------------IWG 535
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
+LL ACR H VEL E VA+ + +EP+N GAYV+L N
Sbjct: 536 SLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRG 595
Query: 195 -----------------------------EALKDLLERMEQE----GYVPDTKEVLLDVE 221
E + +LE ++++ G+V DT EVL D++
Sbjct: 596 MKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMD 655
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EE K+ L +H E+LA+ FG+IST GT IR+IKNL R K++SKI +RE+I R
Sbjct: 656 EEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIAR 715
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 716 DRNRF-HHF 723
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 113/261 (43%), Gaps = 86/261 (32%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN---------------- 153
+ C +G D+G KFF A++ +H + H G +
Sbjct: 459 VLCACTHSGMVDKGKKFF-----ARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIK 513
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
VW +LL ACRVHR+ E+AE A IL +EP N YV+L N
Sbjct: 514 NMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEK 573
Query: 195 --EALKDLLER-------------------------------------------MEQEGY 209
E K +++R ++ GY
Sbjct: 574 LHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGY 633
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
PDT EV LD+ EE+K++ +Y H E+LA+ FG+IS+ G TIR++KNL + K+
Sbjct: 634 SPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKL 693
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VSK+ +RE+IVRD RF HF
Sbjct: 694 VSKVYNREVIVRDRTRF-HHF 713
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 110/252 (43%), Gaps = 75/252 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAG 149
+ + C G D+GL++F + + + AR F+ M
Sbjct: 459 VLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIK 518
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ +W LL CR+H N+ELA++ A + IEP N YV L N
Sbjct: 519 PDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIR 578
Query: 195 EAL---------------------------------KDLLE-------RMEQEGYVPDTK 214
E + K++LE RM++ GYVPDT
Sbjct: 579 ETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTN 638
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DVE EQK+ L YH E+LA+ FGIISTP GT I+V KNL + + K +S I
Sbjct: 639 FVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNIT 698
Query: 275 HREMIVRDNRRF 286
R++IVRD+ RF
Sbjct: 699 GRKIIVRDSNRF 710
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMA---------------------KIKARHAPFSRIMH 147
+I A C +G DEGL F M + ++K + + +
Sbjct: 868 AIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPS 927
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
+ + W +LL ACR+H++VE E A + ++EPN YV++ N
Sbjct: 928 NLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALG 987
Query: 195 --------------------------------------EALKDLLE----RMEQEGYVPD 212
+ L + LE RM +EGYVPD
Sbjct: 988 VRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPD 1047
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL +V++E+K+ +L H ERLA+ FG+++TP GTTIRV KNL K++SK
Sbjct: 1048 ISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISK 1107
Query: 273 IVHREMIVRDNRRFCRHF 290
IV RE+I+RD RRF HF
Sbjct: 1108 IVDREIILRDVRRF-HHF 1124
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAG 149
+ + C G DEG F M M I R F + M
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK-- 198
+W TLL++C+VH+NVE+ E+ ++++EP ++G Y++L N +ALK
Sbjct: 493 PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVR 552
Query: 199 --------------------------------------------DLLERMEQEGYVPDTK 214
D++++++ GYVP+T
Sbjct: 553 GEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTA 612
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E LD EE+ K++ + +H E+LA+ FG+I +P GTTIR+ KNL + K+VSK+
Sbjct: 613 EARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVF 672
Query: 275 HREMIVRDNRRFCRHF 290
+RE++VRD RF HF
Sbjct: 673 NREIVVRDRTRF-HHF 687
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 104/231 (45%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELA--- 171
G+ G +E F +M + T +VW TLLS+C VH+N+ELA
Sbjct: 491 GRAGKLEEAYNFISKMCVE----------------PTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 172 ---------EKVADMILMIE----------------------------------PNNTGA 188
E + +LM N T
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHG 594
Query: 189 YVI---------LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
+V INE LK ++E+ME+EGYV DT VL DV+EE K+ +L+ H ERLA+
Sbjct: 595 FVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 654
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FGII+T GTTIRV KN+ K +SKI RE+IVRDN RF HF
Sbjct: 655 FGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRF-HHF 704
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
YC IS NS+ AG QNG ++E L+ F QM+ AK+K FS ++ A
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 105/231 (45%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELA--- 171
G+ G +E F +M R+ GS VW TLLS+C VH+N+ELA
Sbjct: 455 GRAGKLEEAYDFISKM-------------RVEPTGS---VWSTLLSSCSVHKNLELAEKV 498
Query: 172 ---------EKVADMILMIE----------------------------------PNNTGA 188
E + +LM N T
Sbjct: 499 AEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHG 558
Query: 189 YVI---------LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
+V INE LK ++E+ME+EGYV DT VL DV+EE K+ +L+ H ERLA+
Sbjct: 559 FVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 618
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FGII+T GTTIRV KN+ K +SKI RE+IVRDN RF HF
Sbjct: 619 FGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRF-HHF 668
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 78 RPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA 137
+ +R +VF + RD +IS NS+ AG QNG ++E L+ F QM+ AK++
Sbjct: 253 KSARIEDSERVFSHLYRRD-------SISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305
Query: 138 RHAPFSRIMHA 148
FS ++ A
Sbjct: 306 GAVAFSSVIPA 316
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 94/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALK 198
+W +LL AC++H N+ELAE A ++ IEP N+G+YV+L I E L
Sbjct: 490 IWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLN 549
Query: 199 D------------------------------------LLERM----EQEGYVPDTKEVLL 218
+LE M E+ G+VPDT EVL
Sbjct: 550 GKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQ 609
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++EEE K+ L +H E+LA+ FG+IST GT + V+KNL R K++SKI RE+
Sbjct: 610 EMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREI 669
Query: 279 IVRDNRRFCRHF 290
+ RD RF HF
Sbjct: 670 VARDRTRF-HHF 680
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 102/202 (50%), Gaps = 56/202 (27%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA--------------- 188
R M + +WL LLSACRVH N+E+AE+ A IL +EPN + A
Sbjct: 464 RYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWA 523
Query: 189 ---------------------YVIL-------------------INEALKDLLERMEQEG 208
+V+L I E L L +++++ G
Sbjct: 524 DVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFG 583
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD K L DVE+EQK+ +L +H ERLA+ FG++ST +G+TI V+KNL K
Sbjct: 584 YVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIK 643
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKIV R+++VRD+ RF HF
Sbjct: 644 LMSKIVGRKIVVRDSGRF-HHF 664
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 80/270 (29%)
Query: 97 FLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIM 146
F E + N +T C G DEG +FF M ++ +I+
Sbjct: 231 FSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFS 290
Query: 147 HAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI 191
AG E VW LL C+VH+N++LAE+ + ++P N G YV+
Sbjct: 291 RAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVV 350
Query: 192 LIN---------------EALKD------------------------------------- 199
+ N + +KD
Sbjct: 351 ISNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKI 410
Query: 200 ---LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
LL +M++ GY P T VLLD+EE++K+ LY H E+LA+VFG+++TP+GT IR++KN
Sbjct: 411 WDKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKN 470
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
L K++S IV RE+IVRD RF
Sbjct: 471 LRVCEDCHAALKIISGIVSREIIVRDRNRF 500
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 110/258 (42%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------------MAKIKARHAPFSRIMH 147
S+ A C +G +EGLK F M ++K + + I
Sbjct: 619 SVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPR 678
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
W +LL ACR+H N+E+ E A ++ +EPN YV+L N
Sbjct: 679 NFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATE 738
Query: 195 --------------------------------------EALKDLLE----RMEQEGYVPD 212
E L+ LE RM +EGY+PD
Sbjct: 739 VRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPD 798
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL +VEE++K+ +L H E+LA+ FGI++T GT IRV KNL K +SK
Sbjct: 799 TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISK 858
Query: 273 IVHREMIVRDNRRFCRHF 290
+V RE+I+RD RRF HF
Sbjct: 859 VVDREIILRDVRRF-HHF 875
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 113/273 (41%), Gaps = 80/273 (29%)
Query: 97 FLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS-------- 143
F E + IS N IT C G ++G K F M+ + R ++
Sbjct: 548 FEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGR 607
Query: 144 -----------RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
+ M + VW +LL ACR+H +VE AE + +EP N G YV+L
Sbjct: 608 AGRLDEAVELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLL 667
Query: 193 IN-----------EALKDLLE--------------------------------------- 202
+ + LK+LLE
Sbjct: 668 ADIYARAKLQNQVDVLKELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALI 727
Query: 203 -----RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
+M+ EGYVPDT+ VL D+EEE+K+ IL H E+LA+ FG+I T G IR+ KNL
Sbjct: 728 GEFVTQMKNEGYVPDTRSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNL 787
Query: 258 PSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK RE++VRD RF HF
Sbjct: 788 RLCEDCHSVTKFISKFTDREIVVRDVNRF-HHF 819
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALKD 199
W +LL++C++H+N +LA+ A+ +L+I+P N+GAY+ L N + +KD
Sbjct: 582 WGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKD 641
Query: 200 ----------------------------------------LLERMEQEGYVPDTKEVLLD 219
+ E +++ G++PDT+ VL D
Sbjct: 642 RGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHD 701
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
+EEE K+ IL YH E+LA+ FG+++TP+ T +R++KNL K +SK+V RE+I
Sbjct: 702 LEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREII 761
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 762 VRDATRF-HHF 771
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALKD 199
W +LL++C++H+N +LA+ A+ +L+I+P N+GAY+ L N + +KD
Sbjct: 582 WGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKD 641
Query: 200 ----------------------------------------LLERMEQEGYVPDTKEVLLD 219
+ E +++ G++PDT+ VL D
Sbjct: 642 RGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHD 701
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
+EEE K+ IL YH E+LA+ FG+++TP+ T +R++KNL K +SK+V RE+I
Sbjct: 702 LEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREII 761
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 762 VRDATRF-HHF 771
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 90/189 (47%), Gaps = 56/189 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W L++ CR H+NVE AE VA +++EP+ +GAYV+L N
Sbjct: 380 IWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMR 439
Query: 195 -----------------------------EALKDLLERMEQ--------EGYVPDTKEVL 217
+KD+L + + EGY+PD KEVL
Sbjct: 440 EKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVL 499
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LD+EEE+K+ L H E+LA+ F +IS D IR+ KNL H K++SK+ RE
Sbjct: 500 LDIEEEEKEGALSRHSEKLAIAFALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGRE 559
Query: 278 MIVRDNRRF 286
++VRD RF
Sbjct: 560 IVVRDRTRF 568
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------INEALKD----- 199
+W +LL AC++H NVEL E A+ ++ IEP N G+YV+L NE K
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 200 -------------------------------------LLERME----QEGYVPDTKEVLL 218
+LE ME + G+VPDT EVL
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R K++SKI RE+
Sbjct: 660 EMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREI 719
Query: 279 IVRDNRRFCRHF 290
I RD RF HF
Sbjct: 720 IARDRTRF-HHF 730
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 123/318 (38%), Gaps = 118/318 (37%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G+ +VF M D +S ++ +G QNG DE L++F +L + + H F
Sbjct: 315 GTAVRVFRGMPKLDL-------VSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTF 367
Query: 143 ----SRIMHAGSTEN--------------------------------------------- 153
S HAG +
Sbjct: 368 VGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMS 427
Query: 154 ------VWLTLLSACRVHRNVELAEKVADMILMIEPNN---------------------- 185
+W +LL CR+H+NV LA A+ + IEP N
Sbjct: 428 VKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVEN 487
Query: 186 ----------------------TGAYVILINEAL-----------KDLLERMEQEGYVPD 212
T +V L+ + L K L +M +EGYV D
Sbjct: 488 TRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVAD 547
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL DVE+EQK+ + YH ERLA+ FGII+TP G I+V KNL K++SK
Sbjct: 548 TGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISK 607
Query: 273 IVHREMIVRDNRRFCRHF 290
IV RE+IVRD+ RF HF
Sbjct: 608 IVQREIIVRDSNRF-HHF 624
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 113/256 (44%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAG 149
+ + C G DEG ++F Q+ M + AR FS M
Sbjct: 537 VLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVE 596
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------INEALK-- 198
W +LLSACRVH+N +LAE A+ +L I+P N+GAY L N+A K
Sbjct: 597 PDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIW 656
Query: 199 --------------------------------------------DLLERMEQEGYVPDTK 214
+ + +++ G+VPD +
Sbjct: 657 KRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQ 716
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DV++E K+ +L H E+LA+ FG++STP+ TT+R++KNL K +SK+
Sbjct: 717 SVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVA 776
Query: 275 HREMIVRDNRRFCRHF 290
RE+I+RD RF HF
Sbjct: 777 DREIILRDATRF-HHF 791
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 107/249 (42%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY IS GC G+ G FDE M M A +W
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA----------------IWG 539
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
+LL ACRVH NVEL E A + +EP N GAYV+L N
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKG 599
Query: 195 -----------------------------EALKDLLERMEQ----EGYVPDTKEVLLDVE 221
+ + +L+ ++Q G+VPDT EVL D++
Sbjct: 600 MKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMD 659
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EE K+ L +H E+LA+ FG+IST TTIR++KNL K++SKI +RE+I R
Sbjct: 660 EEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIAR 719
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 720 DRNRF-HHF 727
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 24/119 (20%)
Query: 85 VRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR 144
R++FE + VRD A+S N++ AG Q+G F+E L FF +M A + AP
Sbjct: 217 ARRLFEEIPVRD-------AVSWNAMIAGYAQSGRFEEALAFFQEMKRANV----AP--- 262
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLER 203
E+ +T+LSAC ++EL V IE + G+ + L+N AL D+ +
Sbjct: 263 ------NESTMVTVLSACAQSGSLELGNWVRS---WIEDHGLGSNLRLVN-ALIDMYSK 311
>gi|294461906|gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 106/249 (42%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I+ + C G+ G DE F + PF+ NVW
Sbjct: 4 DYCIAPREVHYACMIDLLGRAGRLDEARDFMKTI----------PFA------PDANVWG 47
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
LL ACR++ N++L + A+ + +EP+N YV+L N
Sbjct: 48 ALLGACRMYGNIDLGKHAAECLFQLEPHNAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRG 107
Query: 195 -----------------------------EALKDLLERM----EQEGYVPDTKEVLLDVE 221
E + LE + E GYVPDT VL DVE
Sbjct: 108 VQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPDTNFVLHDVE 167
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EQK++ LY+H E+LA+ FG+IST G +R+IKNL K +SKIV RE+I+R
Sbjct: 168 MEQKEHSLYHHSEKLAIAFGLISTLPGLPVRIIKNLRVCGDCHTATKFISKIVEREIIIR 227
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 228 DANRF-HHF 235
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 123/286 (43%), Gaps = 77/286 (26%)
Query: 80 SRSGSVRKVFEIMAV-RDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKI--- 135
S+ G R+V ++ + R+ + +++ ++ +GC G D+GL F M KI
Sbjct: 543 SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVE 602
Query: 136 -KARHA-----------------PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADM 177
K H F + M T +W +LL ACRVH NV++ E
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQ 662
Query: 178 ILMIEPNNTGAYVILIN-----------EALKDLLER----------------------- 203
+L IEP N G YVIL N +L+DL+ +
Sbjct: 663 LLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHA 722
Query: 204 ---------------------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
++ GYVPD VL DV+EEQK+ IL H E+LAL FG+
Sbjct: 723 SDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGL 782
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
I++P IRVIKNL + K +SK+ RE+ +RD RF R
Sbjct: 783 IASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHR 828
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 80/265 (30%)
Query: 105 ISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE--- 152
+S N +T C +G +EG F +M I+ RH ++ ++ AG +
Sbjct: 472 VSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAY 531
Query: 153 ------------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY----------- 189
+VW LLSAC++HR+V L E A+ + ++P NTG Y
Sbjct: 532 NFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSC 591
Query: 190 ------------------------VILIN--------------------EALKDLLERME 205
VI IN E ++DL R++
Sbjct: 592 LWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLK 651
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+ G+VP T+ VL D+ E+ + L H ERLA+ +G+ISTP GTT+R+ KNL +
Sbjct: 652 EAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHA 711
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K++SK+V RE++VRD RF HF
Sbjct: 712 AIKLISKLVSREIVVRDACRF-HHF 735
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 57/196 (29%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------- 194
T VW LL ACR H NVEL E+V ++L +EP N+G Y +L N
Sbjct: 468 TPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRK 527
Query: 195 ---------------------------------EALKDLLE-------RMEQEGYVPDTK 214
+KD+ + R++ EGY PD
Sbjct: 528 LMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPS 587
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VL D++EE+K+ ++ H E+LA+ FG+I+T GTTIR++KNL K++S++
Sbjct: 588 QVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVY 647
Query: 275 HREMIVRDNRRFCRHF 290
+RE+IVRD R+ HF
Sbjct: 648 NREIIVRDRIRY-HHF 662
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 108/250 (43%), Gaps = 76/250 (30%)
Query: 113 GCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI------MHAGSTE 152
C G D+G + F M+ M + AR+ S M
Sbjct: 335 ACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDA 394
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W L++ CR H+NVELAE V + +EP+ +GAYV+L N
Sbjct: 395 LIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLM 454
Query: 195 ------------------------------EALKDLLERMEQ--------EGYVPDTKEV 216
+KD+L + + EGYVPD KEV
Sbjct: 455 REKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEV 514
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
LLD+EEE+ ++ L H E+LA+ F +IST D IR++KNL + H K++SK+ R
Sbjct: 515 LLDIEEEEMESALSRHSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGR 574
Query: 277 EMIVRDNRRF 286
E+IVRD RF
Sbjct: 575 EIIVRDRTRF 584
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 112 AGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-------------------MHAGSTE 152
+ C G +EGL F M I+ R + + M
Sbjct: 724 SACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
VW LL AC+VH NVELAEK A L ++PN+ G +VIL N
Sbjct: 784 RVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVM 843
Query: 195 ---------------------------------EALKDLLER----MEQEGYVPDTKEVL 217
E + LER M Q GYVPDT+ VL
Sbjct: 844 LDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVL 903
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVE+ +K+ L+YH ERLA+ +G++ TP T I + KNL K +SKI R+
Sbjct: 904 HDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQ 963
Query: 278 MIVRDNRRFCRHF 290
+I RD+ RF HF
Sbjct: 964 IIARDSNRF-HHF 975
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDL----- 200
VW +LL ACRVH+NV+LAE A IL +EP N YV+L N E L+ +
Sbjct: 511 VWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMM 570
Query: 201 --------------------------------------LERMEQE----GYVPDTKEVLL 218
LE M Q+ GY PDT EV L
Sbjct: 571 ERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFL 630
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ EE K+ LY H E+LA+ + +IS+ G TIR++KNL H K+VS+ +RE+
Sbjct: 631 DLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNREL 690
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 691 IVRDKTRF-HHF 701
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 91/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI-------------------- 193
+W +LL AC++H NVEL EK A + IEPNN G+YV+L
Sbjct: 469 IWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLN 528
Query: 194 -------------------------------NEALKDLLERME----QEGYVPDTKEVLL 218
N + +LE ME + G+VPDT EVL
Sbjct: 529 DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQ 588
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++EEE K+ L +H E+LA+ FG+IST T + ++KNL R K++SKI RE+
Sbjct: 589 EMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREI 648
Query: 279 IVRDNRRFCRHF 290
I RD RF HF
Sbjct: 649 IARDRTRF-HHF 659
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 135/325 (41%), Gaps = 122/325 (37%)
Query: 80 SRSGSV---RKVF-EIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKI 135
SRSGS+ RK+F I + RD L + S+ Q+G +E ++ F +ML +
Sbjct: 458 SRSGSIKDARKIFNHICSYRDTLTW-------TSMILSLAQHGLGNEAIELFEKMLRINL 510
Query: 136 KARHAPF----SRIMHAGSTEN-------------------------------------- 153
K H + S H G E
Sbjct: 511 KPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAY 570
Query: 154 -------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------ 194
W +LLS+CRVH+ V+LA+ A+ +L+I+PNN+GAY+ L N
Sbjct: 571 NFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACG 630
Query: 195 ---------EALKD----------------------------------------LLERME 205
+++KD + + ++
Sbjct: 631 KWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIK 690
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+ G++PDT VL D+E+E K+ IL +H E+LA+ F +I+TP TT+R++KNL
Sbjct: 691 KMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHS 750
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
+ +S +V RE+IVRD RF HF
Sbjct: 751 AIRYISLLVEREIIVRDATRF-HHF 774
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 110/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ + C +G D G + F M L K++ + H+G +
Sbjct: 410 LLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPME 469
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +LL AC+ H N+ELAE A ++ IEP N+G+YV+L N
Sbjct: 470 PDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVR 529
Query: 195 ------------------------------------EALKDLLERM----EQEGYVPDTK 214
+ +LE M E+ G+ PDT
Sbjct: 530 GVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTS 589
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVL ++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R K++SKI
Sbjct: 590 EVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIY 649
Query: 275 HREMIVRDNRRFCRHF 290
RE++ RD RF HF
Sbjct: 650 KREIVARDRTRF-HHF 664
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 104/253 (41%), Gaps = 75/253 (29%)
Query: 112 AGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-------------------MHAGSTE 152
+ C G +EGL F M I+ R + + M
Sbjct: 724 SACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS 783
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
VW LL AC+VH NVELAEK A L ++PN+ G +VIL N
Sbjct: 784 RVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVM 843
Query: 195 ---------------------------------EALKDLLER----MEQEGYVPDTKEVL 217
E + LER M Q GYVPDT+ VL
Sbjct: 844 LDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVL 903
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVE+ +K+ L+YH ERLA+ +G++ TP T I + KNL K +SKI R+
Sbjct: 904 HDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQ 963
Query: 278 MIVRDNRRFCRHF 290
+I RD+ RF HF
Sbjct: 964 IIARDSNRF-HHF 975
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 57/196 (29%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------- 194
T VW LL ACR H NVEL E+V ++L +EP N+G Y +L N
Sbjct: 419 TPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRK 478
Query: 195 ---------------------------------EALKDLLE-------RMEQEGYVPDTK 214
+KD+ + R++ EGY PD
Sbjct: 479 LMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPS 538
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VL D++EE+K+ ++ H E+LA+ FG+I+T GTTIR++KNL K++S++
Sbjct: 539 QVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVY 598
Query: 275 HREMIVRDNRRFCRHF 290
+RE+IVRD R+ HF
Sbjct: 599 NREIIVRDRIRY-HHF 613
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 125/284 (44%), Gaps = 77/284 (27%)
Query: 80 SRSGSVRKVFEIMAV-RDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAK---- 134
S+ G R+V E+ + R+ + +I+ ++ +GC D GL+ F M+ K
Sbjct: 341 SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIE 400
Query: 135 -----------IKARHA------PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADM 177
+ R F + M T +W +LL +CRVH +VE+ V
Sbjct: 401 PDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQK 460
Query: 178 ILMIEPNNTGAYVILIN-----------EALKDLLE------------------------ 202
+L +EP N G YVIL N ++DL++
Sbjct: 461 LLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHA 520
Query: 203 --------------------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
+ +++GYVPD VL DV+EEQK+ +L H E+LAL FG+
Sbjct: 521 SDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGL 580
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
I+TP+GTTIRVIKNL K VS++ R +I+RD RF
Sbjct: 581 IATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRF 624
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 137/308 (44%), Gaps = 87/308 (28%)
Query: 64 RQVD---IHFDGGVDGLRPSRSGSVR-KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGP 119
RQVD + ++ + G G K+FE M ++ LE I+ + + C G
Sbjct: 554 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN-LEL--DGITFIGVISACTHAGL 610
Query: 120 FDEGLKFFGQML--------------MAKIKARHAPFSRIMH--------AGSTENVWLT 157
+EG ++F M+ M + +R + M AG+T +W T
Sbjct: 611 VNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGAT--IWRT 668
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------EALKDLLER 203
LL+ACRVH NV+L E A+ ++ ++P ++ AYV+L N L D+ +
Sbjct: 669 LLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKV 728
Query: 204 MEQEGY-----------------------------------------VPDTKEVLLDVEE 222
++ GY PDTK VL DVEE
Sbjct: 729 KKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEE 788
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
E K+ IL H ERLA+ FG+I+TP GT I+++KNL K++SKI R+++VRD
Sbjct: 789 EHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRD 848
Query: 283 NRRFCRHF 290
+ RF HF
Sbjct: 849 SNRF-HHF 855
>gi|302794404|ref|XP_002978966.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
gi|300153284|gb|EFJ19923.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
Length = 318
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 115/265 (43%), Gaps = 88/265 (33%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFF--------------------------GQMLMAKIKA 137
A++ SI + C G F+ G F G++L A+
Sbjct: 46 AVTFKSILSACSHAGLFEHGFFHFDLLVHDFGIAPTMDHFKCMVDLLGRSGRLLEAEELV 105
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--- 194
+ PF + W TLL+ACRVH++VE ++ A+M+L + G YV+L N
Sbjct: 106 QTMPFV------PDDVTWNTLLAACRVHKSVERGKRAAEMLLELTSEIPGYYVLLSNIHA 159
Query: 195 --------EALKDLLER------------------------------------------- 203
++DL+E
Sbjct: 160 AAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQILEELKRLS 219
Query: 204 --MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLR 261
M++ GYVPDT EVL V E++K+++L++H E+LA+ G+ISTP GTT+RV+KNL
Sbjct: 220 VLMKEAGYVPDTTEVLRLVNEDEKESLLFFHSEKLAITCGLISTPPGTTLRVVKNLRVCS 279
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRF 286
K +SKI R++IVRD RF
Sbjct: 280 DCHSATKFISKITRRKIIVRDLNRF 304
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 125/284 (44%), Gaps = 77/284 (27%)
Query: 80 SRSGSVRKVFEIMAV-RDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAK---- 134
S+ G R+V E+ + R+ + +I+ ++ +GC D GL+ F M+ K
Sbjct: 369 SKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIE 428
Query: 135 -----------IKARHA------PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADM 177
+ R F + M T +W +LL +CRVH +VE+ V
Sbjct: 429 PDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQK 488
Query: 178 ILMIEPNNTGAYVILIN-----------EALKDLLE------------------------ 202
+L +EP N G YVIL N ++DL++
Sbjct: 489 LLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHA 548
Query: 203 --------------------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
+ +++GYVPD VL DV+EEQK+ +L H E+LAL FG+
Sbjct: 549 SDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGL 608
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
I+TP+GTTIRVIKNL K VS++ R +I+RD RF
Sbjct: 609 IATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRF 652
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 123/311 (39%), Gaps = 117/311 (37%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
GS +VFE MA D +S ++ +G QNG +E L++F L + IK H F
Sbjct: 321 GSAVRVFEAMAKPDL-------VSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTF 373
Query: 143 ----SRIMHAGSTEN--------------------------------------------- 153
S HAG +
Sbjct: 374 VGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMA 433
Query: 154 ------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA------------------- 188
+W +LL CR+H+NV LA + A+ + IEP N
Sbjct: 434 VKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVED 493
Query: 189 -------------------------YVILINEA-----------LKDLLERMEQEGYVPD 212
+V L+ + LK L +M +EGYV D
Sbjct: 494 VRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVAD 553
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
+ VL DVE+EQK+ + YH ERLA+ FGII++P+G+ I+V KNL K++S+
Sbjct: 554 IEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHAAIKLISQ 613
Query: 273 IVHREMIVRDN 283
IV R++IVRD+
Sbjct: 614 IVQRDIIVRDS 624
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+++++ K+ + YH ERLA+ FGII++P+G+ I+V KNL K++S+I
Sbjct: 617 RDIIVRDSNSLKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHTAIKLISQI 676
Query: 274 VHREMIVRDNRRFCRHF 290
V R++IVRD+ RF HF
Sbjct: 677 VQRDIIVRDSNRF-HHF 692
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 122/318 (38%), Gaps = 118/318 (37%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G+ +VF M D +S ++ +G QNG DE L F +L + + H F
Sbjct: 315 GTAMRVFRGMPKPDL-------VSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTF 367
Query: 143 ----SRIMHAGSTEN--------------------------------------------- 153
S HAG +
Sbjct: 368 VGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMP 427
Query: 154 ------VWLTLLSACRVHRNVELAEKVADMILMIEPNN---------------------- 185
+W +LL CR+H+NV LA A+ + IEP N
Sbjct: 428 VKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVEN 487
Query: 186 ----------------------TGAYVILINEA-----------LKDLLERMEQEGYVPD 212
T +V L+ + LK L +M +EGYV D
Sbjct: 488 MRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVAD 547
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL DVE+EQK+ + YH ERLA+ FGII+TP G+ I+V KNL K++SK
Sbjct: 548 TGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISK 607
Query: 273 IVHREMIVRDNRRFCRHF 290
IV RE+IVRD+ RF HF
Sbjct: 608 IVQREIIVRDSNRF-HHF 624
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 119/274 (43%), Gaps = 80/274 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM----------------- 130
A+R F + I N +T C G EG +FF M
Sbjct: 345 ALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMV 404
Query: 131 -LMAKIKARHAPFSRIMHAGSTEN--VWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
L+++ H I++ N VW LL ACRVH+NVE+AE+ +L ++P N G
Sbjct: 405 DLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDG 464
Query: 188 AYVILIN---------------EALKD--------------------------------- 199
YV+L N + +KD
Sbjct: 465 YYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQ 524
Query: 200 LLERMEQ-------EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+ +R E+ +GYVP+T VLLD+EE +K + H E+LALVFG+++TP T IR
Sbjct: 525 IFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIR 584
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL K++S IV+RE++VRD RF
Sbjct: 585 IMKNLRICEDCHSAFKLISAIVNREIVVRDRNRF 618
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 119/274 (43%), Gaps = 80/274 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM----------------- 130
A+R F + I N +T C G EG +FF M
Sbjct: 312 ALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMV 371
Query: 131 -LMAKIKARHAPFSRIMHAGSTEN--VWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
L+++ H I++ N VW LL ACRVH+NVE+AE+ +L ++P N G
Sbjct: 372 DLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDG 431
Query: 188 AYVILIN---------------EALKD--------------------------------- 199
YV+L N + +KD
Sbjct: 432 YYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQ 491
Query: 200 LLERMEQ-------EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+ +R E+ +GYVP+T VLLD+EE +K + H E+LALVFG+++TP T IR
Sbjct: 492 IFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIR 551
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL K++S IV+RE++VRD RF
Sbjct: 552 IMKNLRICEDCHSAFKLISAIVNREIVVRDRNRF 585
>gi|449488164|ref|XP_004157956.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 33/181 (18%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------- 191
F M T +W L + R+H N+EL ++ +++ ++P+ T +
Sbjct: 268 FIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKPSLPPRRKQS 327
Query: 192 ---LINEA-------------------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNIL 229
++ E LK L +M + GYVPDT+ VL D++EE K+ L
Sbjct: 328 STNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQAL 387
Query: 230 YYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRH 289
YH ERLA+ +G+ISTP TT+R+IKNL + K++SKIV RE+IVRDN+RF H
Sbjct: 388 QYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF-HH 446
Query: 290 F 290
F
Sbjct: 447 F 447
>gi|449446817|ref|XP_004141167.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 33/181 (18%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------- 191
F M T +W L + R+H N+EL ++ +++ ++P+ T +
Sbjct: 268 FIEKMPINPTAKIWDALRNYARLHGNMELEDRAEELMFSLDPSTTSTTIKPSLPPRRKQS 327
Query: 192 ---LINEA-------------------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNIL 229
++ E LK L +M + GYVPDT+ VL D++EE K+ L
Sbjct: 328 STNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVPDTRYVLHDIDEEAKQQAL 387
Query: 230 YYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRH 289
YH ERLA+ +G+ISTP TT+R+IKNL + K++SKIV RE+IVRDN+RF H
Sbjct: 388 QYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF-HH 446
Query: 290 F 290
F
Sbjct: 447 F 447
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIK----ARHA-----------------PFSRIMH 147
++ +GC G D+G+ F M KI ++H F + M
Sbjct: 367 AVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMP 426
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EA 196
+ +W LL AC VH N+++ E V +L IEP N G YVIL N +
Sbjct: 427 FEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRS 486
Query: 197 LKDLL--------------------------------------------ERMEQEGYVPD 212
L++L+ R ++ GYVPD
Sbjct: 487 LRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPD 546
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL DV+EEQK+ IL H E+LAL FG+I+TP+ IRVIKNL + K SK
Sbjct: 547 LSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSK 606
Query: 273 IVHREMIVRDNRRFCR 288
I RE+ +RD RF R
Sbjct: 607 IYGREVSLRDKNRFHR 622
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 113/262 (43%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI---- 145
AI+ + A C G +EG+ +F M M + R +
Sbjct: 309 AITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLI 368
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------E 195
M V + LLSACR+H N+ +AE+ A ++ ++P N G YV+L N E
Sbjct: 369 QNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWE 428
Query: 196 ALK-----------------------------------------------DLLERMEQEG 208
A K D++ R++ G
Sbjct: 429 AAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAG 488
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD EVL D++E++K+N L H E+LA+ FG++ST GT IRV+KNL K
Sbjct: 489 YVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMK 548
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+S++ +RE+IVRD RF HF
Sbjct: 549 FISEVYNREIIVRDRNRF-HHF 569
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 77/256 (30%)
Query: 112 AGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGST 151
A C +G D G++ F M ++ + +S I M G
Sbjct: 605 AACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQ 664
Query: 152 E-NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLE 202
+ + W + L ACR+HRNV L E A+ + +EP+ YV+L N E ++
Sbjct: 665 QVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRN 724
Query: 203 RMEQ-----------------------------------------------EGYVPDTKE 215
RM Q +GY PDT
Sbjct: 725 RMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSS 784
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D+EE +K IL YH E+LA+ FG++ TP G TIRV KNL K +S++V
Sbjct: 785 VLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVG 844
Query: 276 REMIVRDNRRFCRHFL 291
RE+++RD RRF HF+
Sbjct: 845 REIVLRDVRRF-HHFV 859
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 111/297 (37%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS-------------- 150
+S NS+ GC Q+G L FF QM+ + ++ F+ ++ A S
Sbjct: 371 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY 430
Query: 151 -TEN----------------------------------------VWLTLLSACRVHRNVE 169
+EN VWL LLSAC +H +E
Sbjct: 431 FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLE 490
Query: 170 LAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQEG------------- 208
+AE+ A I+ +EP+ + AYV+L N + + M+Q G
Sbjct: 491 VAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 550
Query: 209 ----------------------------------YVPDTKEVLLDVEEEQKKNILYYHGE 234
YVPD + L DVE+EQK+ +L YH E
Sbjct: 551 GWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSE 610
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
RLA+ FG+IST +G+TI V+KNL K+++KIV R++IVRD+ RF HF+
Sbjct: 611 RLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRF-HHFM 666
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 111/297 (37%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS-------------- 150
+S NS+ GC Q+G L FF QM+ + ++ F+ ++ A S
Sbjct: 355 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY 414
Query: 151 -TEN----------------------------------------VWLTLLSACRVHRNVE 169
+EN VWL LLSAC +H +E
Sbjct: 415 FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLE 474
Query: 170 LAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQEG------------- 208
+AE+ A I+ +EP+ + AYV+L N + + M+Q G
Sbjct: 475 VAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 534
Query: 209 ----------------------------------YVPDTKEVLLDVEEEQKKNILYYHGE 234
YVPD + L DVE+EQK+ +L YH E
Sbjct: 535 GWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSE 594
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
RLA+ FG+IST +G+TI V+KNL K+++KIV R++IVRD+ RF HF+
Sbjct: 595 RLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRF-HHFM 650
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG---------- 149
I+ S+ C G +EGL+FF M + +K + AG
Sbjct: 1039 ITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIX 1098
Query: 150 -----STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
E +W L ACR H++V LAEK A +L ++P N G Y++L N
Sbjct: 1099 SMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWED 1158
Query: 195 -EALKDLLE--------------------------------------------RMEQEGY 209
++DL+ ++E GY
Sbjct: 1159 VAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 1218
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPDT VL DV+EE K ILY H E+LA+ FG+I+TP+ T IR+IKNL K+
Sbjct: 1219 VPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKL 1278
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VS I R +IVRD RF HF
Sbjct: 1279 VSAITGRVIIVRDANRF-HHF 1298
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 88/228 (38%), Gaps = 75/228 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML---MAKIKARHAP-----------------FSR 144
I+ S+ C G +EGL+FF M + +H +
Sbjct: 363 ITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIK 422
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAE-------------------------------- 172
M E +W L ACR H++V LAE
Sbjct: 423 SMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWED 482
Query: 173 --KVADMILMIEPNNTGAYVIL---------------------INEALKDLLERMEQEGY 209
K+ D++ T + + I E LK L ++E GY
Sbjct: 483 VAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGY 542
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
VPDT VL DV+EE K ILY H E+LA+ FG+I+TP+ T IR+IKNL
Sbjct: 543 VPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNL 590
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG---------- 149
I+ S+ C G +EGL+FF M + A +K + AG
Sbjct: 591 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 650
Query: 150 -----STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
E +W L ACR H++V LAEK A +L ++P N G Y++L N
Sbjct: 651 SMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWED 710
Query: 195 -EALKDLLER--------------------------------------------MEQEGY 209
+DL+ + +E GY
Sbjct: 711 VAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 770
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPDT VL DV+EE K ILY H E+LA+ FG+I+TP+ T IR+IKNL K+
Sbjct: 771 VPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKL 830
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VS I R +IVRD RF HF
Sbjct: 831 VSAITGRVIIVRDANRF-HHF 850
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 88/265 (33%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFF--------------------------GQMLMAKIKA 137
A++ SI + C G F+ G F G++L A+
Sbjct: 162 AVTFKSILSACSHAGLFEHGFFHFDLLVHDFGITPTMDHFKCMVDLLGRSGRLLEAEELV 221
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--- 194
+ PF + W TLL+ACRVH++VE ++ A+++L + G YV+L N
Sbjct: 222 QTMPFV------PDDVTWNTLLAACRVHKSVERGKRAAEVLLELTSEIPGYYVLLSNIHA 275
Query: 195 --------EALKDLLER------------------------------------------- 203
++DL+E
Sbjct: 276 AAGDHAEKAKVRDLMEARGVRKKPGWSTIEINDRFHEFTAGEKFQHPKKQQILEELKRLS 335
Query: 204 --MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLR 261
M+++GYVPDT EVL V E++K+++L++H E+LA+ G+ISTP GTT+RV+KNL
Sbjct: 336 VLMKEDGYVPDTTEVLRLVNEDEKESLLFFHSEKLAIACGLISTPPGTTLRVVKNLRVCS 395
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRF 286
K +SKI R++IVRD RF
Sbjct: 396 DCHSATKFISKITGRKIIVRDLNRF 420
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 118/287 (41%), Gaps = 89/287 (31%)
Query: 67 DIHFDGGVDGLRPSRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGC-----GQNG 118
DI F G + SRSG + R +F M DY I+ GC G +G
Sbjct: 470 DITFVGLLSAC--SRSGMLDLGRHIFRTMTQ-------DYKITPKLEHYGCMIDLLGHSG 520
Query: 119 PFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMI 178
F E + M M +W +LL AC++ NVEL E A +
Sbjct: 521 LFKEAEEMINNMEMEPDGV----------------IWCSLLKACKIRGNVELGESFAQNL 564
Query: 179 LMIEPNNTGAYVIL---------INEALK------------------------------- 198
+ IEP N G YV+L NE K
Sbjct: 565 IKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 199 -----------DLLERME----QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+LE ME + G+VPDT EVL ++EEE K+ L +H E+LA+ FG+I
Sbjct: 625 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 684
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ST GT + ++KNL R K++SKI RE+I RD RF HF
Sbjct: 685 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRF-HHF 730
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM---LMAKIKARHAP-----------------FSR 144
+S SI C +G DEG +FF M K K H F +
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
M +W LLS CR+H +V+LAEKVA+ + +EP NTG YV+L N E
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420
Query: 197 LKDLLER-----------------------------------------------MEQEGY 209
+K L ++ M++EGY
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGY 480
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P T+ L++ + QK+ L H E+LA+ FGI++ P TIRV KNL K
Sbjct: 481 FPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKF 540
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK + RE+++RD+ RF HF
Sbjct: 541 ISKTLGREIVLRDSNRF-HHF 560
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 109/251 (43%), Gaps = 77/251 (30%)
Query: 100 YCDYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENV 154
Y +Y I+ N+ C G+ G DE L M PF
Sbjct: 532 YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM----------PFY------PDAAT 575
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------------- 194
W LL A R+H + EL EK A+ + +EP+N+G YV+L N
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRD 635
Query: 195 -------------------------------EALKDLLERME----QEGYVPDTKEVLLD 219
E + LE ++ ++G+V TK VL D
Sbjct: 636 KGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHD 695
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
VEEE+K+++L YH E+LA+ FGI+S P G IRVIKNL + K +SKI R++I
Sbjct: 696 VEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQII 755
Query: 280 VRDNRRFCRHF 290
VRD+ RF HF
Sbjct: 756 VRDSNRF-HHF 765
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 109/251 (43%), Gaps = 77/251 (30%)
Query: 100 YCDYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENV 154
Y +Y I+ N+ C G+ G DE L M PF
Sbjct: 532 YQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSM----------PFY------PDAAT 575
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------------- 194
W LL A R+H + EL EK A+ + +EP+N+G YV+L N
Sbjct: 576 WGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRD 635
Query: 195 -------------------------------EALKDLLERME----QEGYVPDTKEVLLD 219
E + LE ++ ++G+V TK VL D
Sbjct: 636 KGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHD 695
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
VEEE+K+++L YH E+LA+ FGI+S P G IRVIKNL + K +SKI R++I
Sbjct: 696 VEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQII 755
Query: 280 VRDNRRFCRHF 290
VRD+ RF HF
Sbjct: 756 VRDSNRF-HHF 765
>gi|361067033|gb|AEW07828.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129209|gb|AFG45289.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129210|gb|AFG45290.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129211|gb|AFG45291.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129212|gb|AFG45292.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129213|gb|AFG45293.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129214|gb|AFG45294.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129215|gb|AFG45295.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129216|gb|AFG45296.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129217|gb|AFG45297.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129218|gb|AFG45298.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129219|gb|AFG45299.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129220|gb|AFG45300.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129221|gb|AFG45301.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129222|gb|AFG45302.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129223|gb|AFG45303.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129224|gb|AFG45304.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129225|gb|AFG45305.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
Length = 105
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ LL +ME GYVPDTK VL DVEEEQKK +L YH E+LA+ FG+I+TP GT+IR++KN
Sbjct: 2 LEALLGQMEAAGYVPDTKCVLHDVEEEQKKYMLLYHSEKLAIAFGLINTPPGTSIRIVKN 61
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L +K +SKIV RE+++RD RF HF
Sbjct: 62 LRVCDDCHSASKYISKIVSREIVMRDTSRF-HHF 94
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 80/258 (31%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMH-------- 147
+ A C G +EG K+F M+ M + +R + M
Sbjct: 206 VFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNP 265
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------- 191
AGST +W T+L+ACRVH+ EL A+ I+ ++P ++ AYV+
Sbjct: 266 AGST--IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 323
Query: 192 ---LINE------------------------------------ALKDLLERMEQEGYVPD 212
L+NE L+DL R++ GY PD
Sbjct: 324 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 383
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL D+++E K+ +L H ERLA+ FG+I+TP G+ + +IKNL K+++K
Sbjct: 384 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAK 443
Query: 273 IVHREMIVRDNRRFCRHF 290
I RE++VRD+ RF HF
Sbjct: 444 IEEREIVVRDSNRF-HHF 460
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSR 144
+S SI C +G DEG K F M M + AR F +
Sbjct: 656 VSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIK 715
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M +W LL CR+H +V+LAEKVA+ I +EP NTG YV+L N
Sbjct: 716 AMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEE 775
Query: 195 -----------------------------------------EALKDLLER----MEQEGY 209
+ ++ LL+R M++EGY
Sbjct: 776 VQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGY 835
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P T LL+ +E +K+ L H E+LA+ FG+++ P G TIRV KNL K
Sbjct: 836 SPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKF 895
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK RE+I+RD+ RF HF
Sbjct: 896 MSKSASREIILRDSSRF-HHF 915
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 94/196 (47%), Gaps = 57/196 (29%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------EALK 198
T VW LL ACR H NVEL E+V ++L +EP N+G Y +L N E K
Sbjct: 467 TPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRK 526
Query: 199 DLLER--------------------------------------------MEQEGYVPDTK 214
+ ER ++ EGY PD
Sbjct: 527 LMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPS 586
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VL D++EE+K+ ++ H E+LA+ FG+I+T GTTIR++KNL K++S++
Sbjct: 587 QVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVY 646
Query: 275 HREMIVRDNRRFCRHF 290
+RE+IVRD R+ HF
Sbjct: 647 NREIIVRDRIRY-HHF 661
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 115/266 (43%), Gaps = 86/266 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS-------------- 150
I+ + + C G D+G K+F +M ++H I H G
Sbjct: 453 ITYIGVLSACTHTGLVDKGRKYFLRM-----TSQHGIEPNIAHYGCLVDLLARAGRLKEA 507
Query: 151 ---TEN--------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
EN VW LL+ CRV+R ++AE V IL +EP+N YV+L N
Sbjct: 508 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAAC 567
Query: 195 ---EALKDL-------------------------------------------LERMEQE- 207
L++L L++M Q+
Sbjct: 568 KRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL 627
Query: 208 ---GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
GY PD EV LD+ EE K+N ++ H E+LA+ FG+I++P G TIR+ KNL
Sbjct: 628 KLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCH 687
Query: 265 HGNKVVSKIVHREMIVRDNRRFCRHF 290
+ K+VSK+ +RE+IVRD RF HF
Sbjct: 688 NMAKLVSKVYNREVIVRDRTRF-HHF 712
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 80/258 (31%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMH-------- 147
+ A C G +EG K+F M+ M + +R + M
Sbjct: 602 VFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNP 661
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------- 191
AGST +W T+L+ACRVH+ EL A+ I+ ++P ++ AYV+
Sbjct: 662 AGST--IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 192 ---LINE------------------------------------ALKDLLERMEQEGYVPD 212
L+NE L+DL R++ GY PD
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 779
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL D+++E K+ +L H ERLA+ FG+I+TP G+ + +IKNL K+++K
Sbjct: 780 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAK 839
Query: 273 IVHREMIVRDNRRFCRHF 290
I RE++VRD+ RF HF
Sbjct: 840 IEEREIVVRDSNRF-HHF 856
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 110/261 (42%), Gaps = 75/261 (28%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS-------------------R 144
+I+ S+ A C G D+G +F M I + F+ R
Sbjct: 390 SIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIR 449
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M E VW LLSACRV+ N+ + AD +LM+ P ++G YV+L N
Sbjct: 450 QMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWAD 509
Query: 195 -EALKDLLER--------------------------------------------MEQEGY 209
A++ ++ER M++ GY
Sbjct: 510 VAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGY 569
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
+P+T L DVEEE K+ L H E+LA+ F II+T GT IRV KNL K+
Sbjct: 570 MPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKL 629
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKI RE+I+RD RF HF
Sbjct: 630 ISKIAEREIIIRDTHRF-HHF 649
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 62/252 (24%)
Query: 94 VRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN 153
+++ Y D +R IT G + L G L A+ + PF AG+
Sbjct: 540 IKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFE----AGAP-- 593
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------------- 191
+W LL+ CR+H N+EL + AD +L + P G Y+I
Sbjct: 594 IWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMR 653
Query: 192 ----------------------LINEA-----------LKDLLERMEQEGYVPDTKEVLL 218
L+++A L+ L+ M++ GYVPDTK VL
Sbjct: 654 ERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLH 713
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E E K++ L H E+LA+V+GI+ P G TIRV KNL + K +SK+V RE+
Sbjct: 714 DMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREI 773
Query: 279 IVRDNRRFCRHF 290
+VRD +RF HF
Sbjct: 774 VVRDRKRF-HHF 784
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------------MAKIKARHAPFSRIMH 147
S+ A C +G DEGL+ F M +IK + + +
Sbjct: 536 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 595
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
+ W +LL A R+H N+E+ E A ++ +EPN YV+L N
Sbjct: 596 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 655
Query: 195 --------------------------------------EALKDLLE----RMEQEGYVPD 212
E L LE RM +EGYVPD
Sbjct: 656 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 715
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL +VEE++K+ +L H E+LA+ FGI++T GT IRV KNL K +SK
Sbjct: 716 TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISK 775
Query: 273 IVHREMIVRDNRRFCR 288
IV RE+I+RD RRF R
Sbjct: 776 IVDREIILRDVRRFHR 791
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFG----QMLMAKIKARHAP----------FSRI------MHA 148
S+ A C NG DE +K+F Q ++ K +A FS++ M
Sbjct: 544 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF 603
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+ +W ++L +CR+H N ELA AD + +EP + YVIL N
Sbjct: 604 KADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACV 663
Query: 195 -------------------------------------EALKDLLER----MEQEGYVPDT 213
+ +KD L+R M+++GY PD
Sbjct: 664 KKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDI 723
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L V+ E K L YH ERLA+ F +++TP GT IR++KNL + K++SKI
Sbjct: 724 TCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKI 783
Query: 274 VHREMIVRDNRRFCRHF 290
V+R++IVRD+RRF HF
Sbjct: 784 VNRDIIVRDSRRF-HHF 799
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFG----QMLMAKIKARHAP----------FSRI------MHA 148
S+ A C NG DE +K+F Q ++ K +A FS++ M
Sbjct: 544 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF 603
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+ +W ++L +CR+H N ELA AD + +EP + YVIL N
Sbjct: 604 KADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACV 663
Query: 195 -------------------------------------EALKDLLER----MEQEGYVPDT 213
+ +KD L+R M+++GY PD
Sbjct: 664 KKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDI 723
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L V+ E K L YH ERLA+ F +++TP GT IR++KNL + K++SKI
Sbjct: 724 TCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKI 783
Query: 274 VHREMIVRDNRRFCRHF 290
V+R++IVRD+RRF HF
Sbjct: 784 VNRDIIVRDSRRF-HHF 799
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 115/266 (43%), Gaps = 86/266 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS-------------- 150
I+ + + C G D+G K+F +M ++H I H G
Sbjct: 474 ITYIGVLSACTHTGLVDKGRKYFLRM-----TSQHGIEPNIAHYGCLVDLLARAGRLKEA 528
Query: 151 ---TEN--------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
EN VW LL+ CRV+R ++AE V IL +EP+N YV+L N
Sbjct: 529 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAAC 588
Query: 195 ---EALKDL-------------------------------------------LERMEQE- 207
L++L L++M Q+
Sbjct: 589 KRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL 648
Query: 208 ---GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
GY PD EV LD+ EE K+N ++ H E+LA+ FG+I++P G TIR+ KNL
Sbjct: 649 KLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCH 708
Query: 265 HGNKVVSKIVHREMIVRDNRRFCRHF 290
+ K+VSK+ +RE+IVRD RF HF
Sbjct: 709 NMAKLVSKVYNREVIVRDRTRF-HHF 733
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL+ACR+H + EL E+V +L ++PN+ G YV+L N
Sbjct: 439 IWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMR 498
Query: 195 --------------------------------EALKDLLERMEQE----GYVPDTKEVLL 218
E + L M QE GY PDT +VLL
Sbjct: 499 ERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLL 558
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++EE+K+ L +H E+LA+ FG+I T GTTIR+ KNL K++SKI +RE+
Sbjct: 559 DMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREI 618
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 619 IVRDRCRF-HHF 629
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------------MAKIKARHAPFSRIMH 147
S+ A C +G DEGL+ F M +IK + + +
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
+ W +LL A R+H N+E+ E A ++ +EPN YV+L N
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 195 --------------------------------------EALKDLLE----RMEQEGYVPD 212
E L LE RM +EGYVPD
Sbjct: 743 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL +VEE++K+ +L H E+LA+ FGI++T GT IRV KNL K +SK
Sbjct: 803 TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISK 862
Query: 273 IVHREMIVRDNRRFCR 288
IV RE+I+RD RRF R
Sbjct: 863 IVDREIILRDVRRFHR 878
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------------MAKIKARHAPFSRIMH 147
S+ A C +G DEGL+ F M +IK + + +
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
+ W +LL A R+H N+E+ E A ++ +EPN YV+L N
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 195 --------------------------------------EALKDLLE----RMEQEGYVPD 212
E L LE RM +EGYVPD
Sbjct: 743 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL +VEE++K+ +L H E+LA+ FGI++T GT IRV KNL K +SK
Sbjct: 803 TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISK 862
Query: 273 IVHREMIVRDNRRFCR 288
IV RE+I+RD RRF R
Sbjct: 863 IVDREIILRDVRRFHR 878
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 109/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHA 148
S+ + C G +EG ++F M M + R + M
Sbjct: 754 SLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPF 813
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EAL 197
+ +W LL ACR+H NV +AE+ A+ L ++P+N YV L + L
Sbjct: 814 QANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKL 873
Query: 198 KDLLER--------------------------------------------MEQEGYVPDT 213
+ L+E+ M+ EGYVPDT
Sbjct: 874 RKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDT 933
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ V+ DV+E +K+N + +H ERLA+ +G+IST GT IR+ KNL K ++KI
Sbjct: 934 RSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKI 993
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++ RD RF HF
Sbjct: 994 VDREIVARDVNRF-HHF 1009
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 110/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ C +G EGL++ QM L +K + AG +N
Sbjct: 688 VLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEE 747
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +LLS CR+H+N+E+ EKVA + ++EP YV+L N
Sbjct: 748 PDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVR 807
Query: 195 ------------------------------------EALKDLLERMEQE----GYVPDTK 214
E +K L +E + GY PDT
Sbjct: 808 QRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTS 867
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
V D+ EE+K L H E+LA+ +G+I T +GTT+RV KNL + K++SK++
Sbjct: 868 SVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVM 927
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRDN+RF HF
Sbjct: 928 EREIVVRDNKRF-HHF 942
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 113/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-------------------LMAKIKARHAP-FSRIMHA 148
S+ + C G DEGL ++ M L + HA F + M
Sbjct: 1458 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 1517
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA------------ 196
+ W +LL+ACR+H N+ELA K A+ +L ++P++ AYV+ N
Sbjct: 1518 PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENL 1577
Query: 197 -------------------LKD------------------------LLERMEQEGYVPDT 213
LKD L++ ++ GYVPDT
Sbjct: 1578 RKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDT 1637
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D++EEQK+ L+ H ERLAL FG+I+TP+ +T+R+ KNL K VS I
Sbjct: 1638 SFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGI 1697
Query: 274 VHREMIVRDNRRFCRHF 290
V R++++RD RF HF
Sbjct: 1698 VGRKIVLRDPYRF-HHF 1713
>gi|147835805|emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
Length = 497
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 142/314 (45%), Gaps = 49/314 (15%)
Query: 13 NVELSNGL----AGCNEFMDKANGITDRFEERAVSIGHYADLDGISDQLPSSSGGRQVDI 68
+VEL+N L C D A + DR ER +S H ++G + ++ GR +
Sbjct: 167 DVELNNKLIEMYGRCGSMRD-ARRVFDRMRERNMSSWHLM-INGYA----ANGQGRDGLL 220
Query: 69 HFDGGVD-GLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFF 127
F+ GLRP V + +V + L Y + I G + L F
Sbjct: 221 LFERMRKVGLRPVGETFVAVLSACGSVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKF 280
Query: 128 GQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN--- 184
G + A+ F M T VW L + R+H +EL ++ +M+ ++P+
Sbjct: 281 GHINEAE------EFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAI 334
Query: 185 ----------------------------NTGAYVILINEALKDLLERMEQEGYVPDTKEV 216
+T Y E LK L +M + GYVPDT+ V
Sbjct: 335 TDKIPTPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYV 394
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++SKIV R
Sbjct: 395 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGR 454
Query: 277 EMIVRDNRRFCRHF 290
E+IVRDN+RF HF
Sbjct: 455 ELIVRDNKRF-HHF 467
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 113/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-------------------LMAKIKARHAP-FSRIMHA 148
S+ + C G DEGL ++ M L + HA F + M
Sbjct: 817 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 876
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA------------ 196
+ W +LL+ACR+H N+ELA K A+ +L ++P++ AYV+ N
Sbjct: 877 PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENL 936
Query: 197 -------------------LKD------------------------LLERMEQEGYVPDT 213
LKD L++ ++ GYVPDT
Sbjct: 937 RKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDT 996
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D++EEQK+ L+ H ERLAL FG+I+TP+ +T+R+ KNL K VS I
Sbjct: 997 SFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGI 1056
Query: 274 VHREMIVRDNRRFCRHF 290
V R++++RD RF HF
Sbjct: 1057 VGRKIVLRDPYRF-HHF 1072
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 67/96 (69%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ + Y INEALK LLE+ME+EGYV DT EVL DVEEEQK+ +L H ERLA+ FGII
Sbjct: 553 DKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGII 612
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
STP GTTIRV KNL K +SKIV RE++
Sbjct: 613 STPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIV 648
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 20/106 (18%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
++ C G DE K+F M L+ ++ + I MH
Sbjct: 403 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 462
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
T +VW TLL+ACRVH+N+ELAEKV+ + ++P N GAYV+L N
Sbjct: 463 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 508
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 33/45 (73%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHA 148
IS NSI AGC QNG FDEGLKFF QML+AKIK H FS IM A
Sbjct: 262 GISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPA 306
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFG----QMLMAKIKARHAP----------FSRI------MHA 148
S+ A C NG DE +K+F Q ++ K +A FS++ M
Sbjct: 742 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPF 801
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+ +W ++L +CR+H N ELA AD + +EP + YVIL N
Sbjct: 802 KADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACV 861
Query: 195 -------------------------------------EALKDLLER----MEQEGYVPDT 213
+ +KD L+R M+++GY PD
Sbjct: 862 KKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDI 921
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L V+ E K L YH ERLA+ F +++TP GT IR++KNL + K++SKI
Sbjct: 922 TCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKI 981
Query: 274 VHREMIVRDNRRFCRHF 290
V+R++IVRD+RRF HF
Sbjct: 982 VNRDIIVRDSRRF-HHF 997
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 112/263 (42%), Gaps = 81/263 (30%)
Query: 108 NSIT-----AGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS----- 143
NS+T + C + G DEG +FF +L M + R
Sbjct: 561 NSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELL 620
Query: 144 -RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------- 192
+ M T ++W +LL ACR+H N+++AE+ A+ LMI+P + YV L
Sbjct: 621 IKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMW 680
Query: 193 ------------------------------------------INEALKDLLERM---EQE 207
+ E +L M ++E
Sbjct: 681 ENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKRE 740
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
GY+P T+ VL DV E+QK+ + YH E+LA+ +G++S P GT IR+ KNL +
Sbjct: 741 GYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSAS 800
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I RD RF HF
Sbjct: 801 KFISKVTGREIIARDASRF-HHF 822
>gi|225444971|ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Vitis vinifera]
Length = 476
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 142/314 (45%), Gaps = 49/314 (15%)
Query: 13 NVELSNGL----AGCNEFMDKANGITDRFEERAVSIGHYADLDGISDQLPSSSGGRQVDI 68
+VEL+N L C D A + DR ER +S H ++G + ++ GR +
Sbjct: 165 DVELNNKLIEMYGRCGSMRD-ARRVFDRMRERNMSSWHLM-INGYA----ANGQGRDGLL 218
Query: 69 HFDGGVD-GLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFF 127
F+ GLRP V + +V + L Y + I G + L F
Sbjct: 219 LFERMRKVGLRPVGETFVAVLSACGSVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGKF 278
Query: 128 GQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN--- 184
G + A+ F M T VW L + R+H +EL ++ +M+ ++P+
Sbjct: 279 GHINEAE------EFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAI 332
Query: 185 ----------------------------NTGAYVILINEALKDLLERMEQEGYVPDTKEV 216
+T Y E LK L +M + GYVPDT+ V
Sbjct: 333 TDKIPTPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYV 392
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++SKIV R
Sbjct: 393 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGR 452
Query: 277 EMIVRDNRRFCRHF 290
E+IVRDN+RF HF
Sbjct: 453 ELIVRDNKRF-HHF 465
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 113/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-------------------LMAKIKARHAP-FSRIMHA 148
S+ + C G DEGL ++ M L + HA F + M
Sbjct: 808 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 867
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA------------ 196
+ W +LL+ACR+H N+ELA K A+ +L ++P++ AYV+ N
Sbjct: 868 PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENL 927
Query: 197 -------------------LKD------------------------LLERMEQEGYVPDT 213
LKD L++ ++ GYVPDT
Sbjct: 928 RKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDT 987
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D++EEQK+ L+ H ERLAL FG+I+TP+ +T+R+ KNL K VS I
Sbjct: 988 SFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGI 1047
Query: 274 VHREMIVRDNRRFCRHF 290
V R++++RD RF HF
Sbjct: 1048 VGRKIVLRDPYRF-HHF 1063
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 105/259 (40%), Gaps = 78/259 (30%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAP------FSRIMHA 148
S+ A C G D+G FF M M + R F + M
Sbjct: 478 SLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPI 537
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EAL 197
VW LL ACR+H NVE+ + + + ++P N G YV++ N +A+
Sbjct: 538 KPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAV 597
Query: 198 KDLLER----------------------------------------------MEQEGYVP 211
+ L+ R M+ GYVP
Sbjct: 598 RSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVP 657
Query: 212 DTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVS 271
D VL DVEE++K+ IL H ERLA+ FGII+TP GT + + KNL K +S
Sbjct: 658 DYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYIS 717
Query: 272 KIVHREMIVRDNRRFCRHF 290
KI RE+IVRD RF HF
Sbjct: 718 KITEREIIVRDANRF-HHF 735
>gi|361067035|gb|AEW07829.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
Length = 105
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ LL +ME GYVPDTK VL DVEEEQKK +L YH E+LA+ FG+I+TP G +IR++KN
Sbjct: 2 LEALLGQMEAAGYVPDTKCVLHDVEEEQKKYMLLYHSEKLAIAFGLINTPPGASIRIVKN 61
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L +K +SKIV RE+++RD RF HF
Sbjct: 62 LRVCDDCHSASKYISKIVSREIVMRDTSRF-HHF 94
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 79/260 (30%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAK----IKARHAP 141
A++ + +GC +G D GL F M L+ + ++A+
Sbjct: 418 AVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELI 477
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
M AG + VW LL+ACR HRN+E+AE A + ++EP+N+G YV+L N
Sbjct: 478 SQMPMQAGPS--VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 535
Query: 195 ----EALKDLL--------------------------------------------ERMEQ 206
+ L+ LL E+++
Sbjct: 536 WEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKM 595
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GY+PDT VL D+ EE+K+ L H E+LA+ FG+++T G +RV KNL
Sbjct: 596 AGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAA 655
Query: 267 NKVVSKIVHREMIVRDNRRF 286
K +SKI RE+IVRD RF
Sbjct: 656 TKFISKIYEREIIVRDLNRF 675
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY---------------VILINEALK 198
VWL LLSACR H N++LA++ A+ I IEP+ + AY V LI +K
Sbjct: 520 VWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMK 579
Query: 199 D-----------------------------LLERMEQE-----------GYVPDTKEVLL 218
L E++ Q+ GYVPD + L
Sbjct: 580 HNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALH 639
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVE EQK+ +L YH ERLA+ FG++ST +G+ I V+KNL + K+++KIV RE+
Sbjct: 640 DVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREI 699
Query: 279 IVRDNRRF 286
+VRD+ RF
Sbjct: 700 VVRDSSRF 707
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 108/261 (41%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSR------ 144
I+ SI C +G +EG FF M+ M + AR S+
Sbjct: 957 ITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIE 1016
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
M +W LL CR+H +VELAEKVA+ + +EP+N G YV+L N E
Sbjct: 1017 TMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEE 1076
Query: 197 LKDLLER-----------------------------------------------MEQEGY 209
+K L ER M+ EG+
Sbjct: 1077 VKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGH 1136
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P + L++ + +K+ L H E+LA+ FGI++ P G TIRV KNL K
Sbjct: 1137 SPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKF 1196
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK RE+I+RD+ RF HF
Sbjct: 1197 MSKTTRREIILRDSNRF-HHF 1216
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 114/260 (43%), Gaps = 79/260 (30%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAK----IKARHAP 141
A++ + +GC +G D GL F M L+ + ++A+
Sbjct: 344 AVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELI 403
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
M AG + VW LL+ACR HRN+E+AE A + ++EP+N+G YV+L N
Sbjct: 404 SQMPMQAGPS--VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 461
Query: 195 ----EALKDLL--------------------------------------------ERMEQ 206
+ L+ LL E+++
Sbjct: 462 WEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKM 521
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GY+PDT VL D+ EE+K+ L H E+LA+ FG+++T G +RV KNL
Sbjct: 522 AGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAA 581
Query: 267 NKVVSKIVHREMIVRDNRRF 286
K +SKI RE+IVRD RF
Sbjct: 582 TKFISKIYEREIIVRDLNRF 601
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 93/276 (33%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG-------------- 149
+++ ++ +GC G DEGL F ++ + S ++H G
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQ--------SALLHTGHYGCIIDLLGRSGR 395
Query: 150 --------------STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN- 194
ST ++W +LL ACRVH NV + E VA +L +EP N G YVIL N
Sbjct: 396 LEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNI 455
Query: 195 -----------EALKDLLER---------------------------------------- 203
+ K +LE+
Sbjct: 456 YAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 515
Query: 204 ---MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSL 260
++ G+VPD VL DV++EQK+ +L H E+LA+ FG+++TP G TIRV+KNL
Sbjct: 516 FVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRIC 575
Query: 261 RGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
+ K VSK+ RE+ +RD RF H L C
Sbjct: 576 VDCHNFAKFVSKVYEREISLRDKNRF--HLLTHGNC 609
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 80/258 (31%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMH-------- 147
+ A C G +EG K+F M+ M + +R + M
Sbjct: 606 VFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNL 665
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------- 191
AGST +W T+L+ACRVH+ EL A+ I+ + P ++ AYV+
Sbjct: 666 AGST--IWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAK 723
Query: 192 ---LINE------------------------------------ALKDLLERMEQEGYVPD 212
L+NE L+DL R++ GY PD
Sbjct: 724 VRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 783
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL D+++E K+ +L H ERLA+ FG+I+TP G+ + +IKNL K+++K
Sbjct: 784 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAK 843
Query: 273 IVHREMIVRDNRRFCRHF 290
I RE++VRD+ RF HF
Sbjct: 844 IEEREIVVRDSNRF-HHF 860
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 93/276 (33%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG-------------- 149
+++ ++ +GC G DEGL F ++ + S ++H G
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQ--------SALLHTGHYGCIIDLLGRSGR 363
Query: 150 --------------STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN- 194
ST ++W +LL ACRVH NV + E VA +L +EP N G YVIL N
Sbjct: 364 LEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNI 423
Query: 195 -----------EALKDLLER---------------------------------------- 203
+ K +LE+
Sbjct: 424 YAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 483
Query: 204 ---MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSL 260
++ G+VPD VL DV++EQK+ +L H E+LA+ FG+++TP G TIRV+KNL
Sbjct: 484 FVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRIC 543
Query: 261 RGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
+ K VSK+ RE+ +RD RF H L C
Sbjct: 544 VDCHNFAKFVSKVYEREISLRDKNRF--HLLTHGNC 577
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
INE L L +RM++EG+VPDT VL DVE+EQK+ L YH E+LA+ FGIISTP+GT I+
Sbjct: 569 INEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIK 628
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
V KNL + K +SKI +R++IVRD+ RF HF
Sbjct: 629 VFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRF--HFF 665
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Query: 192 LINEALKDLLERMEQEG-YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT 250
LI E ++DL++R+ +EG YVPDT LLDVEEE+K+ LYYH E+LA+ FG+ISTP T
Sbjct: 1464 LIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSAT 1523
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IRVIKNL K +SK+ RE+++RD RF HF
Sbjct: 1524 IRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRF-HHF 1562
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG--------------- 149
+ + C +G F E K+F M + +I+ + AG
Sbjct: 1307 VLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK 1366
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
++ +++ LL ACR + E A++VAD +L ++P+++ AYV+L N
Sbjct: 1367 ASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Query: 192 LINEALKDLLERMEQEG-YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT 250
LI E ++DL++R+ +EG YVPDT LLDVEEE+K+ LYYH E+LA+ FG+ISTP T
Sbjct: 1464 LIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSAT 1523
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IRVIKNL K +SK+ RE+++RD RF HF
Sbjct: 1524 IRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRF-HHF 1562
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG--------------- 149
+ + C +G F E K+F M + +I+ + AG
Sbjct: 1307 VLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK 1366
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
++ +++ LL ACR + E A++VAD +L ++P+++ AYV+L N
Sbjct: 1367 ASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 108/254 (42%), Gaps = 76/254 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-------------------LMAKIKARHAPFSRI--MH 147
++ +GC G D+GL+ F +M L+ + F I M
Sbjct: 319 AVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMP 378
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKD 199
T +W +LL ACRVH N + E V +L IEP N G YVIL N E +++
Sbjct: 379 FEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRN 438
Query: 200 LLERM-----------------------------------------------EQEGYVPD 212
+ E M ++ GYVPD
Sbjct: 439 VRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPD 498
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL DV+EEQK+ IL H E+LAL FG+IST +G +RVIKNL + K VSK
Sbjct: 499 QSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSK 558
Query: 273 IVHREMIVRDNRRF 286
+ R++ +RD RF
Sbjct: 559 VYGRQVSIRDKNRF 572
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 107/257 (41%), Gaps = 75/257 (29%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQM--LMAKIKARH---------------APFSRI--MHA 148
SI + C G DEG K F +M L ++ +H F I M +
Sbjct: 267 TSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPS 326
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
++ VW LL AC++H N+EL + A +L +EPN+TG YV++ N
Sbjct: 327 PPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHTGYYVLMSNIYAASNKWKEVWKL 386
Query: 195 ------------------EALKDLLE-----------------------RMEQEGYVPDT 213
E KD+L M+ GYVPD
Sbjct: 387 RQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDL 446
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L DVEEE K+ +L YH E+LA+ FG++ G IRV KNL K +S I
Sbjct: 447 SCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISHI 506
Query: 274 VHREMIVRDNRRFCRHF 290
R++IVRD RF HF
Sbjct: 507 YQRKIIVRDANRF-HHF 522
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 104/256 (40%), Gaps = 75/256 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS-------------------RIMHAG 149
S+ C G +EG F M+ + R ++ R MH
Sbjct: 389 SVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIE 448
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALK 198
+ VW LL ACR+H +VE AE + +EP N G YV+L + LK
Sbjct: 449 PSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLK 508
Query: 199 DLLE--------------------------------------------RMEQEGYVPDTK 214
+LLE +M+ +GYVPDT
Sbjct: 509 ELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTG 568
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+E E+K+ IL H E+LA+ FG+I+T G IR+ KNL K +SK
Sbjct: 569 IVLYDIEGEEKERILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFT 628
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 629 EREIVVRDVNRF-HHF 643
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 54/192 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
E VWL LLSACR+H +V+ EK A I ++ ++ AYV+L N
Sbjct: 496 EMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVK 555
Query: 195 ------------------------------------EALKDLLERMEQEGYVPDTKEVLL 218
E L+ L E++++ GYVPD + L
Sbjct: 556 MKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCLRIFEKLEFLREKLKELGYVPDYRSALH 615
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVE+EQK+ +L+YH ERLA+ FG+I+T +G+T+ V+KNL K++S++V ++
Sbjct: 616 DVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKI 675
Query: 279 IVRDNRRFCRHF 290
++RD RF HF
Sbjct: 676 VLRDPTRF-HHF 686
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+ WL LL ACR+H +V+ ++A++I ++P ++G Y++L N
Sbjct: 398 SAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAM 457
Query: 195 --------------------------EALKDLLERMEQE-----------GYVPDTKEVL 217
+ L L R+ E GYV D + VL
Sbjct: 458 RLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVL 517
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVEEE+K+ +L+YH ERLA+ FG+ISTP GT + ++KNL K +SK+V R+
Sbjct: 518 RDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRK 577
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 578 IVVRDAIRF-HHF 589
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIK--ARHAPFSR 144
+S SI C +G DEG FF M L+A+ ++ F +
Sbjct: 554 VSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIK 613
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
+M +W LL CR++ +V+LAEKVA+ + +EP NTG YV+L N E
Sbjct: 614 MMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEE 673
Query: 197 LKDLLE-----------------------------------------------RMEQEGY 209
+K L E RM++EG+
Sbjct: 674 VKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 733
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P + L+ ++ +K+ L H E++A+ FGI+S P G T+RV KNL K
Sbjct: 734 FPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKF 793
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+V R++I+RD+ RF HF
Sbjct: 794 MSKMVKRDIILRDSNRF-HHF 813
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 109/257 (42%), Gaps = 77/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ C +G EGL++ QM L +K + AG +
Sbjct: 454 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 513
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+W +LLS+CR+H+N+E+ EKVA + +EP YV+L N
Sbjct: 514 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 573
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E +K L +E + GY PDT
Sbjct: 574 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 633
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V D+ EE+K L H E+LAL +G+I T +GTTIRV KNL + K++SK+
Sbjct: 634 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 693
Query: 274 VHREMIVRDNRRFCRHF 290
+ RE++VRDN+RF HF
Sbjct: 694 MEREIVVRDNKRF-HHF 709
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 109/257 (42%), Gaps = 77/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ C +G EGL++ QM L +K + AG +
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+W +LLS+CR+H+N+E+ EKVA + +EP YV+L N
Sbjct: 764 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 823
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E +K L +E + GY PDT
Sbjct: 824 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 883
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V D+ EE+K L H E+LAL +G+I T +GTTIRV KNL + K++SK+
Sbjct: 884 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 943
Query: 274 VHREMIVRDNRRFCRHF 290
+ RE++VRDN+RF HF
Sbjct: 944 MEREIVVRDNKRF-HHF 959
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIK--ARHAPFSR 144
+S SI C +G DEG FF M L+A+ ++ F +
Sbjct: 427 VSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIK 486
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
+M +W LL CR++ +V+LAEKVA+ + +EP NTG YV+L N E
Sbjct: 487 MMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEE 546
Query: 197 LKDLLE-----------------------------------------------RMEQEGY 209
+K L E RM++EG+
Sbjct: 547 VKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 606
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P + L+ ++ +K+ L H E++A+ FGI+S P G T+RV KNL K
Sbjct: 607 FPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKF 666
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+V R++I+RD+ RF HF
Sbjct: 667 MSKMVKRDIILRDSNRF-HHF 686
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
I+ S+ A C G +EG +F M L + + ++ I
Sbjct: 1455 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 1514
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M VW +LL ACR+H+NV+L E A + ++P+N G YV+L N
Sbjct: 1515 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 1574
Query: 195 -----------------------------------------EALKDLLERMEQE----GY 209
E + LE++ E GY
Sbjct: 1575 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 1634
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP+ VL DV+EE+K+ IL H E+LA+ FG++++ GTTI +IKNL K+
Sbjct: 1635 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 1694
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+VHR+ +VRD++RF HF
Sbjct: 1695 ISKLVHRDFVVRDSKRF-HHF 1714
>gi|414876780|tpg|DAA53911.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 491
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 76/266 (28%)
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQM----LMAKIK----------ARHAPFSRI 145
+C ++ S+ A C NG +E +K+F M M+ K R F +I
Sbjct: 216 FCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKI 275
Query: 146 ------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
M + +W ++L +CR++ N +LA A+ + + P + AYVIL N
Sbjct: 276 QKVLDEMPFEADPVIWSSILHSCRIYGNQDLATVAAENLFTMVPTDATAYVILSNIYAKA 335
Query: 195 ----------------------------------------------EALKDLLER----M 204
+ +K+ LER M
Sbjct: 336 GNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEM 395
Query: 205 EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
+++GY PDT L V+ +QK L YH ERLA+ F +I+TP GT I V+KNL +
Sbjct: 396 DKQGYEPDTSCALHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITVMKNLSACLDCH 455
Query: 265 HGNKVVSKIVHREMIVRDNRRFCRHF 290
K++SKIV+R++IVRD+RRF HF
Sbjct: 456 AAIKMISKIVNRDIIVRDSRRF-HHF 480
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 113/250 (45%), Gaps = 74/250 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHA--PFSR--------IMHAGSTE------ 152
+I A +G DEGL F M KA+H P S + +G E
Sbjct: 620 AIFASLSHSGMVDEGLNLFYTM-----KAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLI 674
Query: 153 ----------NVWLTLLSACRVHRNVELAEKVADMILMIEPN------------------ 184
+ W +LL AC++H+N+E+ E A + +++PN
Sbjct: 675 KTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSMLGRKMKEK 734
Query: 185 ----NTGAYVIL--------------------INEALKDLLERMEQEGYVPDTKEVLLDV 220
G I ++E L+ L RM++EGYVPDT VL +V
Sbjct: 735 GVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNV 794
Query: 221 EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIV 280
EE+K+ +L H ERLA+ FG+++T GTTIRV KNL K +SKIV RE+I+
Sbjct: 795 GEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIIL 854
Query: 281 RDNRRFCRHF 290
RD RRF HF
Sbjct: 855 RDVRRF-HHF 863
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 109/257 (42%), Gaps = 77/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ C +G EGL++ QM L +K + AG +
Sbjct: 1059 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 1118
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+W +LLS+CR+H+N+E+ EKVA + +EP YV+L N
Sbjct: 1119 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 1178
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E +K L +E + GY PDT
Sbjct: 1179 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 1238
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V D+ EE+K L H E+LAL +G+I T +GTTIRV KNL + K++SK+
Sbjct: 1239 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 1298
Query: 274 VHREMIVRDNRRFCRHF 290
+ RE++VRDN+RF HF
Sbjct: 1299 MEREIVVRDNKRF-HHF 1314
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRIM----HAGSTEN----------- 153
I C G ++GL++F QML + I+ + ++ ++ AG ++
Sbjct: 518 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 577
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +LLS+CR+H N+ L EKVA+ +L +EP YV++ N
Sbjct: 578 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVR 637
Query: 195 ------------------------------------EALKDLLERMEQE----GYVPDTK 214
E +++ R+E + GY PDT
Sbjct: 638 GRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTG 697
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE K IL H E+LA+ FG+++T G +RV KNL + K +SK+V
Sbjct: 698 SVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVV 757
Query: 275 HREMIVRDNRRFCRHF 290
+R+++VRDN+RF HF
Sbjct: 758 NRDIVVRDNKRF-HHF 772
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 91/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------EALKDLL 201
VW + L ACRVH+NV+LA+ A IL +EP N YV+L N + K ++
Sbjct: 449 VWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMM 508
Query: 202 ER----------ME---------------------------------QEGYVPDTKEVLL 218
ER ME + GY PDT EV L
Sbjct: 509 ERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFL 568
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ EE K+ LY H E+LA+ + +IS+ G TIR++KNL H K+VS+ +RE+
Sbjct: 569 DLGEEDKETALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNREL 628
Query: 279 IVRDNRRFCRHF 290
IV+D RF HF
Sbjct: 629 IVKDKTRF-HHF 639
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 112/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ A C G +EG +F M L + + ++ I M
Sbjct: 2332 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKM 2391
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
VW +LL ACR+H+NV+L E A + ++P+N G YV+L N
Sbjct: 2392 KPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERM 2451
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E + LE++ E GYVP+
Sbjct: 2452 RMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNM 2511
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL DV+EE+K+ IL H E+LA+ FG++++ GTTI +IKNL K++SK+
Sbjct: 2512 TSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKL 2571
Query: 274 VHREMIVRDNRRFCRHF 290
VHR+ +VRD++RF HF
Sbjct: 2572 VHRDFVVRDSKRF-HHF 2587
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENV----- 154
I+ + + C G D G ++F M ++ K + AG E
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 155 ----------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
W LL A R+H N EL EK A+M+ +EP N+G YV+L N
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVD 615
Query: 195 -----------------------------------------EALKDLLERME----QEGY 209
E + LE ++ +EGY
Sbjct: 616 ADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGY 675
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
V TK VL DVEEE+K+++L YH E+LA+ FGI++ P G IRV+KNL K
Sbjct: 676 VSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKH 735
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV R +I+RD+ RF HF
Sbjct: 736 ISKIVGRLIILRDSHRF-HHF 755
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTG---------------AYVILINE----AL 197
LL A R+H N EL EK A M + P N+G ++ + N+ ++
Sbjct: 820 ALLGASRIHGNTELGEKAAQMFFKMGPQNSGISKMRDVGVQKVPGYSWFEVQNKIHTFSV 879
Query: 198 KDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN- 256
L R + + ++ + EE+K+ L Y E LA GI++ P G RV+K
Sbjct: 880 GLFLSRERENIGFLEELDLKMREREEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKR 939
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ R K +SKIV R + +RD+ RF
Sbjct: 940 VYVCEDCRSAIKHMSKIVGRLITLRDSHRF 969
>gi|358248494|ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 80/125 (64%), Gaps = 7/125 (5%)
Query: 172 EKVADMILMIEPNNTGAYVILI------NEALKDLLERMEQEGYVPDTKEVLLDVEEEQK 225
+K +D+ ++ E N Y I NE L L +M + GYVPDT+ VL D++EE+K
Sbjct: 315 KKQSDVNMLEEKNRATEYRYSIPYKEEDNEKLGGLSGQMREAGYVPDTRYVLHDIDEEEK 374
Query: 226 KNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
+ L YH ERLA+ +G+ISTP TT+R+IKNL + K++SKIV RE+IVRDN+R
Sbjct: 375 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 434
Query: 286 FCRHF 290
F HF
Sbjct: 435 F-HHF 438
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------------- 192
W+ LSAC+++ ++E +++ A + +EP N V+L
Sbjct: 571 WIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKS 630
Query: 193 -------------INEALKDL----------------LERMEQE----GYVPDTKEVLLD 219
IN + + LER+ +E GYVPDTK VL D
Sbjct: 631 SGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRD 690
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
V+EE+K +L YH ERLA+ GIISTP GTT+RV+KNL K +S+IV R++I
Sbjct: 691 VDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQII 750
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 751 VRDTSRF-HHF 760
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENV----- 154
I+ + + C G D G ++F M ++ K + AG E
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 155 ----------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
W LL A R+H N EL EK A+M+ +EP N+G YV+L N
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVD 615
Query: 195 -----------------------------------------EALKDLLERME----QEGY 209
E + LE ++ +EGY
Sbjct: 616 ADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGY 675
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
V TK VL DVEEE+K+++L YH E+LA+ FGI++ P G IRV+KNL K
Sbjct: 676 VSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKH 735
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV R +I+RD+ RF HF
Sbjct: 736 ISKIVGRLIILRDSHRF-HHF 755
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRIM----HAGSTEN----------- 153
I C G ++GL++F QML + I+ + ++ ++ AG ++
Sbjct: 616 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 675
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +LLS+CR+H N+ L EKVA+ +L +EP YV++ N
Sbjct: 676 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVR 735
Query: 195 ------------------------------------EALKDLLERMEQE----GYVPDTK 214
E +++ R+E + GY PDT
Sbjct: 736 GRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTG 795
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE K IL H E+LA+ FG+++T G +RV KNL + K +SK+V
Sbjct: 796 SVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVV 855
Query: 275 HREMIVRDNRRFCRHF 290
+R+++VRDN+RF HF
Sbjct: 856 NRDIVVRDNKRF-HHF 870
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 117/278 (42%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLM---AKIKARHAP--- 141
AV F + + N IT +GC G DEG +F M KA H
Sbjct: 83 AVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMV 142
Query: 142 --------------FSRIMHAGSTENVWLTLLSACRVHRN-----------VEL------ 170
F M +VW +LL ACRVH N +EL
Sbjct: 143 DLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPG 202
Query: 171 -----------------AEKVADMI----LMIEP--------NNTGAYVI---------L 192
A KV M+ + EP N +++
Sbjct: 203 TYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEE 262
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L +M+ GY+P+T VL DVEEEQK+ IL +H E+LA+ FGIISTP GTTIR
Sbjct: 263 IYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGTTIR 322
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K +S+IV RE+++RD RF HF
Sbjct: 323 VVKNLRVCGDCHTATKFISRIVSREIVLRDTHRF-HHF 359
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 54/192 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
E VWL LLSACR+H +V+ EK A I ++ ++ AYV+L N
Sbjct: 496 EMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVK 555
Query: 195 ------------------------------------EALKDLLERMEQEGYVPDTKEVLL 218
E L+ L E++++ GY PD + L
Sbjct: 556 MKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYEKLEFLREKLKELGYAPDYRSALH 615
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVE+EQK+ +L+YH ERLA+ FG+I+T +G+ + V+KNL K++S +V RE+
Sbjct: 616 DVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREI 675
Query: 279 IVRDNRRFCRHF 290
++RD RF HF
Sbjct: 676 VLRDPIRF-HHF 686
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
W+ L+ ACR++ + E A+ +L + N+T AYV L N
Sbjct: 604 TWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMA 663
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
EA+ LER +E+ GY T EVL
Sbjct: 664 DLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLH 723
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEEEQK+ +L +H E+LA+ FG++STP G+T+RVIKNL + +K +SK+ RE+
Sbjct: 724 DVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREI 783
Query: 279 IVRDNRRFCRHF 290
+VRD RRF HF
Sbjct: 784 VVRDVRRF-HHF 794
>gi|356497955|ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 452
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 80/125 (64%), Gaps = 7/125 (5%)
Query: 172 EKVADMILMIEPNNTGAYVILI------NEALKDLLERMEQEGYVPDTKEVLLDVEEEQK 225
+K +DM ++ E N Y I +E L L +M + GYVPDT+ VL D++EE+K
Sbjct: 318 KKQSDMNMLEEKNRVTEYRYSIPYKEEAHEKLGGLSGQMREAGYVPDTRYVLHDIDEEEK 377
Query: 226 KNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
+ L YH ERLA+ +G+ISTP TT+R+IKNL + K++SKIV RE+IVRDN+R
Sbjct: 378 EKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKR 437
Query: 286 FCRHF 290
F HF
Sbjct: 438 F-HHF 441
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 80/286 (27%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKI 135
R+ K+FE M +C ++ + C +G EGL + QM + +
Sbjct: 676 RAKEAIKLFEEMQRTG---HCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTL 732
Query: 136 KARHAPFSRIMHAG--------STEN--------VWLTLLSACRVHRNVELAEKVADMIL 179
K ++ AG +TE +W LLS+CR+H+N+E+ EK+A +
Sbjct: 733 KHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLF 792
Query: 180 MIEPNNTGAYVILIN--------------------------------------------- 194
+ EP YV+L N
Sbjct: 793 VSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGE 852
Query: 195 ------EALKDLLERMEQE----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIS 244
E +K L +E+E GY PDT V D+ EE+K L H E+LA+ +G+I
Sbjct: 853 SSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIR 912
Query: 245 TPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T +GTT+RV KNL + K++SK++ RE++VRDN+RF HF
Sbjct: 913 TSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRF-HHF 957
>gi|302790766|ref|XP_002977150.1| hypothetical protein SELMODRAFT_53291 [Selaginella moellendorffii]
gi|300155126|gb|EFJ21759.1| hypothetical protein SELMODRAFT_53291 [Selaginella moellendorffii]
Length = 287
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+ WL LL ACR+H +V+ ++A++I ++P ++G Y++L N
Sbjct: 85 SAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAM 144
Query: 195 --------------------------EALKDLLERMEQE-----------GYVPDTKEVL 217
+ L L R+ E GYV D + VL
Sbjct: 145 RLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVL 204
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVEEE+K+ +L+YH ERLA+ FG+ISTP GT + ++KNL K +SK+V R+
Sbjct: 205 RDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRK 264
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 265 IVVRDAIRF-HHF 276
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 111/262 (42%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIK---------------ARHAPFS 143
AI+ + A C G DEG+ F M + I+ A
Sbjct: 389 AITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELI 448
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
+ M + V LL ACR+H N+E AE+ A +L I+P ++G YV+L N
Sbjct: 449 KSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWE 508
Query: 195 ------------------------------------------EALKDLLE----RMEQEG 208
+ ++LE +++ G
Sbjct: 509 EAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAG 568
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD EVL D+ EE+K+ L H E+LA+ FG++ST GT IRV+KNL K
Sbjct: 569 YVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATK 628
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SK+ +RE+IVRD RF HF
Sbjct: 629 LISKLYNREIIVRDRNRF-HHF 649
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 95/204 (46%), Gaps = 54/204 (26%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY IS GC G+ G FDE M M A +W
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGA----------------IWG 539
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
+LL ACRVH NVEL E A + +EP N GAYV+L N
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKG 599
Query: 195 ----EALKDLLERMEQE-----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
+ + +L+ ++Q G VPDT EVL D++EE K+ L +H E+LA+ FG+IST
Sbjct: 600 MKKXQDIYKMLDEIDQSFGERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLIST 659
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKV 269
TTIR++KNL S LRHG V
Sbjct: 660 KPETTIRIVKNLRS--SLRHGLTV 681
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 24/119 (20%)
Query: 85 VRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR 144
R++FE + VRD A+S N++ AG Q+G F+E L FF +M A + AP
Sbjct: 217 ARRLFEEIPVRD-------AVSWNAMIAGYAQSGRFEEALAFFQEMKRANV----AP--- 262
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLER 203
E+ +T+LSAC ++EL V IE + G+ + L+N AL D+ +
Sbjct: 263 ------NESTMVTVLSACAQSGSLELGNWVRS---WIEDHGLGSNLRLVN-ALIDMYSK 311
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKI---KARHAP--- 141
A+ F E + I N +T C G +EG ++F M A H
Sbjct: 724 AIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMV 783
Query: 142 --FSRIMHAGSTEN------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R H T+N VW + LS+CR+H+NVE+ + V++M+L + P++ G
Sbjct: 784 DLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPG 843
Query: 188 AYVILIN---------EA----------------------LKD----------------- 199
AYV+L N EA LKD
Sbjct: 844 AYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDE 903
Query: 200 -------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
L+ R+++ GY D K V+ DVEEEQ + ++ +H E+LA+VFGII+T + T IR
Sbjct: 904 IYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIR 963
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL + K S+++ RE+IVRD RF HF
Sbjct: 964 IIKNLRICTDCHNFIKYASQLLDREIIVRDIHRF-HHF 1000
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------------- 192
W+ LSAC+++ ++E +++ A + +EP N V+L
Sbjct: 513 WIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKS 572
Query: 193 -------------INEALKDL----------------LERMEQE----GYVPDTKEVLLD 219
IN + + LER+ +E GYVPDTK VL D
Sbjct: 573 SGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRD 632
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
V+EE+K +L YH ERLA+ GIISTP GTT+RV+KNL K +S+IV R++I
Sbjct: 633 VDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQII 692
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 693 VRDTSRF-HHF 702
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS------RIMHAG 149
I +GC +G G ++F +ML M + R R M
Sbjct: 312 ILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------INEAL 197
V +LL AC++H++ +L E+V +L ++P + G YV L +N
Sbjct: 372 PNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCR 431
Query: 198 KDLLER-------------------------------------------MEQEGYVPDTK 214
K +++R ++ +G+VP+T
Sbjct: 432 KLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTA 491
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE+K+ + YH ER+A+ FG++STP G TIRV+KNL + K++S
Sbjct: 492 NVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAF 551
Query: 275 HREMIVRDNRRFCRHF 290
RE+IVRD +RF HF
Sbjct: 552 KREIIVRDRKRF-HHF 566
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 116/265 (43%), Gaps = 83/265 (31%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR--------IMHAGSTEN--- 153
+S ++ C + DEG KF+ M+++K K + P+ + +G TE
Sbjct: 668 VSFLALLYACSHSKLVDEG-KFYLDMMVSKYKLQ--PWQEHYACVVDLLGRSGQTEEAYK 724
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL ACR+H+N ELA D +L +EP+N G YV++ N
Sbjct: 725 FIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGK 784
Query: 195 -EALKDLLERMEQEG--------------------------------------------- 208
+K++ +M ++G
Sbjct: 785 WNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRR 844
Query: 209 ---YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YV DT VL DV EE+K ++L+ H ERLA+ FG+IST GT +R+ KNL
Sbjct: 845 EGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHE 904
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+VSK+ RE++VRD RF HF
Sbjct: 905 FTKLVSKLFEREIVVRDANRF-HHF 928
>gi|115458888|ref|NP_001053044.1| Os04g0469400 [Oryza sativa Japonica Group]
gi|113564615|dbj|BAF14958.1| Os04g0469400, partial [Oryza sativa Japonica Group]
Length = 401
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 116/265 (43%), Gaps = 83/265 (31%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR--------IMHAGSTEN--- 153
+S ++ C + DEG KF+ M+++K K + P+ + +G TE
Sbjct: 130 VSFLALLYACSHSKLVDEG-KFYLDMMVSKYKLQ--PWQEHYACVVDLLGRSGQTEEAYK 186
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL ACR+H+N ELA D +L +EP+N G YV++ N
Sbjct: 187 FIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGK 246
Query: 195 -EALKDLLERMEQEG--------------------------------------------- 208
+K++ +M ++G
Sbjct: 247 WNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRR 306
Query: 209 ---YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YV DT VL DV EE+K ++L+ H ERLA+ FG+IST GT +R+ KNL
Sbjct: 307 EGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHE 366
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+VSK+ RE++VRD RF HF
Sbjct: 367 FTKLVSKLFEREIVVRDANRF-HHF 390
>gi|302809294|ref|XP_002986340.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
gi|300145876|gb|EFJ12549.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
Length = 203
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY---------------VILINEALK 198
+W++LL CR+HR+ + AE+VA I +EP T AY V +I +K
Sbjct: 2 IWMSLLGPCRLHRHADCAERVAAKIFELEPGYTTAYVVLSNMYSSIGRRDKVSMIRNLMK 61
Query: 199 -------------------------DL-----------LER----MEQEGYVPDTKEVLL 218
DL L+R M GYVPDTKE+L
Sbjct: 62 SRRVRKVPGISNIEVGSEVHSFVVGDLSHPRSEDIVVELQRPAREMRDAGYVPDTKEILH 121
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DV EEQK+ +L+YH E++A+ FG+IST G+ +R++KNL K VSK+V R +
Sbjct: 122 DVGEEQKEELLHYHSEKMAVAFGLISTEQGSPLRILKNLRVCGDCHSAIKFVSKMVGRSI 181
Query: 279 IVRDNRRFCRHF 290
VRD RF HF
Sbjct: 182 TVRDASRF-HHF 192
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 110/292 (37%), Gaps = 110/292 (37%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTEN------- 153
+S S+ GC QNG DE LK+F +L + K H F ++ HAG E
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 154 --------------------------------------------VWLTLLSACRVHRNVE 169
+W ++L C + N++
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505
Query: 170 LAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQ--------------- 206
LAE+ A + IEP N YV + N E + +RM++
Sbjct: 506 LAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565
Query: 207 --------------------------------EGYVPDTKEVLLDVEEEQKKNILYYHGE 234
EGYVP T VL DVE+EQK+ L YH E
Sbjct: 566 RKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSE 625
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+LA+ F I+ST +GT I+V KNL S K +S I R++ VRD+ RF
Sbjct: 626 KLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRF 677
>gi|222629025|gb|EEE61157.1| hypothetical protein OsJ_15124 [Oryza sativa Japonica Group]
Length = 383
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 116/265 (43%), Gaps = 83/265 (31%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR--------IMHAGSTEN--- 153
+S ++ C + DEG KF+ M+++K K + P+ + +G TE
Sbjct: 112 VSFLALLYACSHSKLVDEG-KFYLDMMVSKYKLQ--PWQEHYACVVDLLGRSGQTEEAYK 168
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL ACR+H+N ELA D +L +EP+N G YV++ N
Sbjct: 169 FIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGK 228
Query: 195 -EALKDLLERMEQEG--------------------------------------------- 208
+K++ +M ++G
Sbjct: 229 WNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRR 288
Query: 209 ---YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YV DT VL DV EE+K ++L+ H ERLA+ FG+IST GT +R+ KNL
Sbjct: 289 EGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHE 348
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+VSK+ RE++VRD RF HF
Sbjct: 349 FTKLVSKLFEREIVVRDANRF-HHF 372
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 110/262 (41%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------ 143
++S S+ + C G +EG K F M M + R F
Sbjct: 734 SVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 793
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP-------------------- 183
++M VW LL +CR+H NV+L E D ++ +EP
Sbjct: 794 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 853
Query: 184 ---------NNTG-------AYVILINEA-------------------LKDLLERMEQEG 208
N+ G ++V L N+ LLE+ME+ G
Sbjct: 854 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD VL +VEEE K+ LY H ERLA+ F +++TP G+TI+++KNL K
Sbjct: 914 YVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTK 973
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SKI R +IVRD RF HF
Sbjct: 974 FISKITTRRIIVRDATRF-HHF 994
>gi|359497573|ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 287
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 66/94 (70%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L L +RM++EGYVPDT VL DVEEEQK+ L YH E+LA+ FGIISTP GT I+
Sbjct: 180 IHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIK 239
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V KNL + K +SKI R++IVRD+ RF
Sbjct: 240 VFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRF 273
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL CR+H N++LA++ A+ + IEP N Y L N
Sbjct: 86 LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLAN 126
>gi|296084769|emb|CBI25911.3| unnamed protein product [Vitis vinifera]
Length = 288
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 66/94 (70%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L L +RM++EGYVPDT VL DVEEEQK+ L YH E+LA+ FGIISTP GT I+
Sbjct: 181 IHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIK 240
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V KNL + K +SKI R++IVRD+ RF
Sbjct: 241 VFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRF 274
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL CR+H N++LA++ A+ + IEP N Y L N
Sbjct: 87 LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLAN 127
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS------RIMHAG 149
I +GC +G G ++F +ML M + R R M
Sbjct: 240 ILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------INEAL 197
V +LL AC++H++ +L E+V +L ++P + G YV L +N
Sbjct: 300 PNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCR 359
Query: 198 KDLLER-------------------------------------------MEQEGYVPDTK 214
K +++R ++ +G+VP+T
Sbjct: 360 KLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTA 419
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE+K+ + YH ER+A+ FG++STP G TIRV+KNL + K++S
Sbjct: 420 NVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAF 479
Query: 275 HREMIVRDNRRFCRHF 290
RE+IVRD +RF HF
Sbjct: 480 KREIIVRDRKRF-HHF 494
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L +L +++++EGYVPDT VL DVEEEQK+ L YH E+LA+VFGIISTP GT I+
Sbjct: 586 IHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIK 645
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V KNL + K +SKIV R++ VRD+ RF
Sbjct: 646 VFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRF 679
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 110/262 (41%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------ 143
++S S+ + C G +EG K F M M + R F
Sbjct: 734 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 793
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP-------------------- 183
++M VW LL +CR+H NV+L E D ++ +EP
Sbjct: 794 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 853
Query: 184 ---------NNTG-------AYVILINEA-------------------LKDLLERMEQEG 208
N+ G ++V L N+ LLE+ME+ G
Sbjct: 854 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD VL +VEEE K+ LY H ERLA+ F +++TP G+TI+++KNL K
Sbjct: 914 YVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTK 973
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SKI R +IVRD RF HF
Sbjct: 974 FISKITTRRIIVRDATRF-HHF 994
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 106/253 (41%), Gaps = 75/253 (29%)
Query: 112 AGCGQNGPFDEGLKFFGQMLMAKIKARH-------------------APFSRIMHAGSTE 152
+ C G EGL F M I+ R F M
Sbjct: 718 SACAHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDS 777
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------INEALKDL 200
+W LL AC+VH +VELAEKVA L ++PN+ G YVIL + + K +
Sbjct: 778 RLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVM 837
Query: 201 LER-------------------------------------------MEQEGYVPDTKEVL 217
L+R M++ GYVPDT+ VL
Sbjct: 838 LDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVL 897
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVE+ +K++ L +H ERLA+ +G++ TP T I + KNL K++SKI R+
Sbjct: 898 HDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQ 957
Query: 278 MIVRDNRRFCRHF 290
+I RD+ RF HF
Sbjct: 958 IIARDSNRF-HHF 969
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 115/274 (41%), Gaps = 89/274 (32%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFF--------------------------GQMLMAKIKA 137
+++ ++ +GC G DEGL F GQ+ A
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG---------- 187
H PF T +W +LL ACRVH NV + E VA +L +EP N G
Sbjct: 403 EHMPFE------PTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYA 456
Query: 188 --------------------------AYVIL-------------------INEALKDLLE 202
+++IL IN +K++
Sbjct: 457 AAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYV 516
Query: 203 RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRG 262
++ G+VPD VL DV++EQK+ +L H E+LA+ FG+++TP G TI+V+KNL
Sbjct: 517 DVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVD 576
Query: 263 LRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
+ K VSK+ RE+ +RD RF H L AC
Sbjct: 577 CHNFAKFVSKVYGREISLRDKNRF--HLLKDGAC 608
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTE------ 152
A S ++I C +G DEG +FF M + K+K + H G+ +
Sbjct: 387 AGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFI 446
Query: 153 ---------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------E 195
++W++LL CR+HRNV+LAEKVA+M+ +EP NTG YV+L N E
Sbjct: 447 ETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWE 506
Query: 196 ALKDL-----------------------------------------------LERMEQEG 208
A++ L RM++EG
Sbjct: 507 AVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEG 566
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+ P K L+ ++ L H +LA+ FG+++ G IRV KN K
Sbjct: 567 HDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAK 626
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+I+RD+ RF HF
Sbjct: 627 FISKMCGREIILRDSNRF-HHF 647
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQML----MAKIKARHA-PFSRIMHAGSTEN-------------- 153
C G E L+FF M+ +A + + I AG ++
Sbjct: 187 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 246
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEAL 197
W TLL+ACR+H E A KVA+++ + P ++ AY +L + +++
Sbjct: 247 VTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSM 306
Query: 198 KD----------------------------------LLE------RMEQEGYVPDTKEVL 217
D LLE RM + GYVP+TK+VL
Sbjct: 307 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 366
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
V EE+K+ ++ H E+LA+ FG+I+TP GT + ++KNL KV++KI+ R
Sbjct: 367 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 426
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 427 IVVRDTHRF-HHF 438
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 68/97 (70%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI + +KD++ ++QEGYVP+T L+DVEEE+K+ LYYH E+LA+ FG++STP T I
Sbjct: 889 LIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPI 948
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
RVIKNL + K +SK+ RE+++RD RF R
Sbjct: 949 RVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHR 985
>gi|125524834|gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indica Group]
Length = 370
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTE------ 152
A S ++I C +G DEG +FF M + K+K + H G+ +
Sbjct: 99 AGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFI 158
Query: 153 ---------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------E 195
++W++LL CR+HRNV+LAEKVA+M+ +EP NTG YV+L N E
Sbjct: 159 ETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWE 218
Query: 196 ALKDL-----------------------------------------------LERMEQEG 208
A++ L RM++EG
Sbjct: 219 AVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEG 278
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+ P K L+ ++ L H +LA+ FG+++ G IRV KN K
Sbjct: 279 HDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAK 338
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+I+RD+ RF HF
Sbjct: 339 FISKMCGREIILRDSNRF-HHF 359
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 63/218 (28%)
Query: 128 GQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
G + A++ R PF +T W L+AC+VH + E ++ A+ +L +EP
Sbjct: 267 GDLEAAEVMIRRMPFQ------ATAMNWAIFLAACKVHSDTERGKRAAEKVLELEP-VPA 319
Query: 188 AYVILIN---------------EALK---------------------------------- 198
AYV L N A+K
Sbjct: 320 AYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAE 379
Query: 199 --DLLERM----EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
LLE + E GYVPDTK VLL+V EEQK+ +L +H E+LA+ FG++STP G+++R
Sbjct: 380 IYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLR 439
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K VS+I RE+ +RD++RF HF
Sbjct: 440 IIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRF-HHF 476
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 63/218 (28%)
Query: 128 GQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
G + A++ R PF +T W L+AC+VH + E ++ A+ +L +EP
Sbjct: 267 GDLEAAEVMIRRMPFQ------ATAMNWAIFLAACKVHSDTERGKRAAEKVLELEP-VPA 319
Query: 188 AYVILIN---------------EALK---------------------------------- 198
AYV L N A+K
Sbjct: 320 AYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDKSHPRAAE 379
Query: 199 --DLLERM----EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
LLE + E GYVPDTK VLL+V EEQK+ +L +H E+LA+ FG++STP G+++R
Sbjct: 380 IYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAFGLLSTPAGSSLR 439
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K VS+I RE+ +RD++RF HF
Sbjct: 440 IIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRF-HHF 476
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------------- 191
VW TLL ACRVH N EL A+MIL EP++ AY++
Sbjct: 296 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 355
Query: 192 ---LINEA------------------------------LKDLLERMEQEGYVPDTKEVLL 218
LI EA L L ++++ GY+PDT VL
Sbjct: 356 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLH 415
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEEQK+ L+ H E++A+ FG+IST IR+ KNL K +S RE+
Sbjct: 416 DIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREI 475
Query: 279 IVRDNRRF 286
+VRD+ RF
Sbjct: 476 VVRDSNRF 483
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
++ + + C QNG +EG + + M L++++ +S I
Sbjct: 478 VTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIK 537
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M VW LLS+CRVH N+ L E A+ + +EP N G Y++L N
Sbjct: 538 EMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDE 597
Query: 195 --------------------------------------EALKDLLER-------MEQEGY 209
+KD+LE+ M++ GY
Sbjct: 598 ENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGY 657
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
+P T VL DVEE+ K+ IL H E+LA+V G+++T G ++VIKNL KV
Sbjct: 658 LPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKV 717
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S++ RE+ VRD RF HF
Sbjct: 718 ISRLEGREIYVRDTNRF-HHF 737
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------------- 191
VW TLL ACRVH N EL A+MIL EP++ AY++
Sbjct: 428 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 487
Query: 192 ---LINEA------------------------------LKDLLERMEQEGYVPDTKEVLL 218
LI EA L L ++++ GY+PDT VL
Sbjct: 488 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLH 547
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEEQK+ L+ H E++A+ FG+IST IR+ KNL K +S RE+
Sbjct: 548 DIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREI 607
Query: 279 IVRDNRRF 286
+VRD+ RF
Sbjct: 608 VVRDSNRF 615
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------------- 191
VW TLL ACRVH N EL A+MIL EP++ AY++
Sbjct: 433 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 492
Query: 192 ---LINEA------------------------------LKDLLERMEQEGYVPDTKEVLL 218
LI EA L L ++++ GY+PDT VL
Sbjct: 493 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLH 552
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEEQK+ L+ H E++A+ FG+IST IR+ KNL K +S RE+
Sbjct: 553 DIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREI 612
Query: 279 IVRDNRRF 286
+VRD+ RF
Sbjct: 613 VVRDSNRF 620
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 112/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHAGSTENV 154
S+ A C G +EG ++F M M + R + + V
Sbjct: 400 SVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV 459
Query: 155 ------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
W +LL+ACR+H++VELAE A + ++P+N G YV+L N
Sbjct: 460 RRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERM 519
Query: 195 -------------------------------------EALKDLLERM----EQEGYVPDT 213
E + LE + ++ GYVP+
Sbjct: 520 RILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNM 579
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL DV+EE+K+ I+ H E+LA+ FG++++ G+TI VIKNL K++SKI
Sbjct: 580 ASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKI 639
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRD +RF HF
Sbjct: 640 VSREIIVRDAKRF-HHF 655
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 118/271 (43%), Gaps = 86/271 (31%)
Query: 105 ISRNSITAG----------CGQNGPFDEGLKFFGQM--------------LMAKIKARHA 140
+S+NSI A CG G +GL F M + ++ R
Sbjct: 926 MSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAG 985
Query: 141 PFSRIMH------AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+ ++ + + VW LLS+C VH+NVEL A+ +L IEP + YV+L N
Sbjct: 986 RLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSN 1045
Query: 195 ---------------EALKDL-------LERMEQEGYV---------------------- 210
++++++ L +E +G V
Sbjct: 1046 MYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEW 1105
Query: 211 -----------PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPS 259
PDT EVL D+EEEQK +L+ H ERLAL +G++ TP G IR++KNL S
Sbjct: 1106 LNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRS 1165
Query: 260 LRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KV+SKIV +E+IVRD RF HF
Sbjct: 1166 CLDCHAIFKVISKIVKQEIIVRDINRF-HHF 1195
>gi|357501199|ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 446
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 32/168 (19%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE------------------ 195
+W TL + R+H ++E + +++ +++P+ A + + +
Sbjct: 269 LWETLRNFARIHGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSE 328
Query: 196 -------------ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
L+ L +M + GYVPDT+ VL D++EE+K+ L YH ERLA+ +G+
Sbjct: 329 YRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGL 388
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ISTP TT+R+IKNL + K++SKIV RE+IVRDN+RF HF
Sbjct: 389 ISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF-HHF 435
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 108/260 (41%), Gaps = 76/260 (29%)
Query: 106 SRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTE-------- 152
S ++I C +G EG KFF M + K+K + H G+ +
Sbjct: 815 SFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIES 874
Query: 153 -------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
++W++LL CR+HR+V+LAEKVAD + +EP NTG YV+L N EA+
Sbjct: 875 MPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAV 934
Query: 198 KDL-----------------------------------------------LERMEQEGYV 210
K L RM +EG+
Sbjct: 935 KKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHD 994
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P K L+ + L H +LA+ FG++ P+G IRV KN K +
Sbjct: 995 PKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFI 1054
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SK+ +RE+I+RD+ RF HF
Sbjct: 1055 SKMCNREIILRDSSRF-HHF 1073
>gi|388511541|gb|AFK43832.1| unknown [Lotus japonicus]
Length = 295
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 112/237 (47%), Gaps = 57/237 (24%)
Query: 93 AVRDFLEYCDYAISRNSITAGC----------GQNGPFDEGLKFFGQMLMAKIKARHAPF 142
AV D + D S+ I G GQ+G E +F ++ PF
Sbjct: 66 AVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEKL----------PF 115
Query: 143 SRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI--------- 193
T VW TL + R+H +++L + V ++++ ++P+ A I
Sbjct: 116 E------PTLTVWETLKNYARIHGDIDLEDHVEELMVNLDPSKAVANKIPTPPPKKYNHI 169
Query: 194 --------------------NEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHG 233
+E LK L+ M+ GYVPDT+ VL D+++E K L YH
Sbjct: 170 SMLDGRNRIIEYKNPSLYKDDEKLKALI-GMKDAGYVPDTRYVLHDIDQEAKGQALLYHS 228
Query: 234 ERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ERLA+ +G+ISTP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 229 ERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 284
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 113/257 (43%), Gaps = 76/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRIM----HAGSTE------------ 152
+ + C G E +FFG M+ + IK F+ ++ HAG E
Sbjct: 372 VLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQ 431
Query: 153 ---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL----------------- 192
+W LL+ C++H+NVEL E ++ +EP + G YV+L
Sbjct: 432 PDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVR 491
Query: 193 ---INEALKDL-------------------------------LERME----QEGYVPDTK 214
N LK + LER+E GY+PDT
Sbjct: 492 KLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTM 551
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
V DV +++K+N++ H ERLA+ FG+ISTP GT + V KNL K++S+IV
Sbjct: 552 PVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIV 611
Query: 275 HREMIVRDNRRFCRHFL 291
RE+I+RD R+ HF+
Sbjct: 612 QREIIIRDVNRY-HHFV 627
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 77/254 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTE 152
C G DEG ++F M L+ + H + I + T
Sbjct: 338 ACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTP 397
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL-------------------- 192
+W TLLS+C H N+ELA++V + IL ++ ++ G YVIL
Sbjct: 398 ILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLM 457
Query: 193 -------------------------------INEALKDLLERMEQE----GYVPDTKEVL 217
++ AL L+ + +E GYVPDT V+
Sbjct: 458 IHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVV 517
Query: 218 -LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
D+E+E+K+ L YH E+LA+ FG+++TP GTTIRV+KNL K++S ++ R
Sbjct: 518 HPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDR 577
Query: 277 EMIVRDNRRFCRHF 290
E+I+RD +RF HF
Sbjct: 578 EIILRDVQRF-HHF 590
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAG 149
+ + C G +EGL+ F M L+ + + I M
Sbjct: 307 VFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIK 366
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALK----------- 198
+ +W +LLSAC+VH N+E+ + A+ + M+ NN+G Y++L N K
Sbjct: 367 PNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIR 426
Query: 199 ----------------------------------------DLLERMEQ----EGYVPDTK 214
+++ +ME EGY+PDT
Sbjct: 427 TKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTS 486
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VLLDV++E+KK L +H ++LA+ FG+I T +G+ +R+ +NL K +S I
Sbjct: 487 QVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIY 546
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD RF HF
Sbjct: 547 EREITVRDRLRF-HHF 561
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 75/264 (28%)
Query: 101 CDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI--------------- 145
C ++ + C +G +EG + F M I+ARH ++ +
Sbjct: 469 CPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYD 528
Query: 146 ----MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNT--------------- 186
M +VW LL AC+++R+V L E A+ + ++P NT
Sbjct: 529 FITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRL 588
Query: 187 --------------------GAYVILIN--------------------EALKDLLERMEQ 206
G +I IN E L+ L R+++
Sbjct: 589 WDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKE 648
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
G++P + VL D+ +E+K+ L H ERLA+ +G+IST GTT+R+ KNL +
Sbjct: 649 AGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSA 708
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K++SK+V+RE++VRD RF HF
Sbjct: 709 TKLISKLVNREIVVRDANRF-HHF 731
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 110/262 (41%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------ 143
++S S+ + C G +EG K F M M + R F
Sbjct: 378 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 437
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP-------------------- 183
++M VW LL +CR+H NV+L E D ++ +EP
Sbjct: 438 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 497
Query: 184 ---------NNTG-------AYVILINEA-------------------LKDLLERMEQEG 208
N+ G ++V L N+ LLE+ME+ G
Sbjct: 498 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 557
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD VL +VEEE K+ LY H ERLA+ F +++TP G+TI+++KNL K
Sbjct: 558 YVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTK 617
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SKI R +IVRD RF HF
Sbjct: 618 FISKITTRRIIVRDATRF-HHF 638
>gi|449519292|ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g15690-like [Cucumis sativus]
Length = 588
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 29/168 (17%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPN-------------NTGAYVILI---- 193
T VW TL + R+H +V+L + ++I+ ++P N A +L
Sbjct: 411 TVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKNXSAISMLDGKNR 470
Query: 194 -----NEAL-KD-----LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
N L KD L+ M+++GYVPDT+ VL D+++E K+ L YH ERLA+ +G+
Sbjct: 471 IVEFRNPTLYKDDXKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGL 530
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ISTP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 531 ISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 577
>gi|302818247|ref|XP_002990797.1| hypothetical protein SELMODRAFT_132418 [Selaginella moellendorffii]
gi|300141358|gb|EFJ08070.1| hypothetical protein SELMODRAFT_132418 [Selaginella moellendorffii]
Length = 281
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 103/245 (42%), Gaps = 76/245 (31%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY S+ GC G+ G DE +F M P+ H T +W
Sbjct: 39 DYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSM----------PY----HPDHT--IWT 82
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EALKDL----------- 200
LL AC H +VE A + AD I+ + P ++G+YV L N E D+
Sbjct: 83 ILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRG 142
Query: 201 -----------------------------------LERME----QEGYVPDTKEVLLDVE 221
L R+E + GYVPD K VL +
Sbjct: 143 VFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAA 202
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E K+ + +H ERLA+ FG+IS+P GT +R++KNL +K++SK R++IVR
Sbjct: 203 REAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSASKIISKFSGRKIIVR 262
Query: 282 DNRRF 286
D RF
Sbjct: 263 DANRF 267
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------------- 191
VW TLL ACRVH N EL A+MIL EP++ AY++
Sbjct: 608 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 667
Query: 192 ---LINEA------------------------------LKDLLERMEQEGYVPDTKEVLL 218
LI EA L L ++++ GY+PDT VL
Sbjct: 668 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLH 727
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEEQK+ L+ H E++A+ FG+IST IR+ KNL K +S RE+
Sbjct: 728 DIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREI 787
Query: 279 IVRDNRRF 286
+VRD+ RF
Sbjct: 788 VVRDSNRF 795
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
W+ L+ ACR++ + E A+ +L + ++T AYV L N
Sbjct: 604 TWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMA 663
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
EA+ LER +E+ GY T EVL
Sbjct: 664 DLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLH 723
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEEEQK+ +L +H E+LA+ FG++STP G+T+RVIKNL + +K +SK+ RE+
Sbjct: 724 DVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREI 783
Query: 279 IVRDNRRFCRHF 290
+VRD RRF HF
Sbjct: 784 VVRDVRRF-HHF 794
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------------------- 191
VW TLL ACRVH N EL A+MIL EP++ AY++
Sbjct: 626 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMK 685
Query: 192 ---LINEA------------------------------LKDLLERMEQEGYVPDTKEVLL 218
LI EA L L ++++ GY+PDT VL
Sbjct: 686 ERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLH 745
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEEQK+ L+ H E++A+ FG+IST IR+ KNL K +S RE+
Sbjct: 746 DIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREI 805
Query: 279 IVRDNRRF 286
+VRD+ RF
Sbjct: 806 VVRDSNRF 813
>gi|449438679|ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 688
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 31/169 (18%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI----------------- 193
T VW TL + R+H +V+L + ++I+ ++P + I
Sbjct: 511 TVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKKRSAISMLDGKNR 570
Query: 194 ------------NEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFG 241
+E LK L+ M+++GYVPDT+ VL D+++E K+ L YH ERLA+ +G
Sbjct: 571 IVEFRNPTLYKDDEKLK-ALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 629
Query: 242 IISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ISTP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 630 LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 677
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 108/252 (42%), Gaps = 75/252 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTENV----------- 154
+ C G DEG + F M I+ R + + AG E
Sbjct: 360 VLCACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEP 419
Query: 155 ----WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKD 199
W L+S+C +H NV + E+V ++ +EP++ G YV+L N +AL+
Sbjct: 420 HASQWGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRK 479
Query: 200 ----------------------------------------LLERMEQE----GYVPDTKE 215
LLE MEQ GYV DT +
Sbjct: 480 MMEERGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIGYVKDTSQ 539
Query: 216 VLLDV-EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL+D+ +EE K N L YH ERLAL FGI++TP IR++KNL R K+VSK+
Sbjct: 540 VLMDMDDEEDKGNTLSYHSERLALAFGILNTPRHMPIRIVKNLRVCRDCHVYAKLVSKLY 599
Query: 275 HREMIVRDNRRF 286
RE+I+RD RF
Sbjct: 600 QREIIMRDRHRF 611
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKI---KARHAP--- 141
A+ F E + I N +T C G +EG ++F M A H
Sbjct: 724 AICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMV 783
Query: 142 --FSRIMHAGSTEN------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R H T+N VW + LS+CR+H+NVE+ + V++M+L + P++ G
Sbjct: 784 DLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPG 843
Query: 188 AYVILIN---------EA----------------------LKD----------------- 199
AYV+L N EA LKD
Sbjct: 844 AYVLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEE 903
Query: 200 -------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
L+ R+++ GY D K V+ DVEEEQ + ++ +H E+LA+VFGII+T + T IR
Sbjct: 904 IYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIR 963
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL + K S+++ RE+I+RD RF HF
Sbjct: 964 IIKNLRICTDCHNFIKYASQLLDREIILRDIHRF-HHF 1000
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI +KD++ ++QEGYVP+T L+DVEEE+K+ LYYH E+LA+ FG++STP T I
Sbjct: 882 LIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPI 941
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
RVIKNL + K ++K+ +RE+++RD RF R
Sbjct: 942 RVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHR 978
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 68/96 (70%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I +AL E+M ++GYVP+ ++VL D+EEEQK+ +L H E+LA+VFGIISTP GTTIR
Sbjct: 536 IIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIR 595
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
V+KNL K +SKIV RE++VRD RF R
Sbjct: 596 VMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHR 631
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 16/80 (20%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE F +M KIK T +VW TLL ACRVH+N LAE+V
Sbjct: 419 GRAGDLDEAYNFISEM---KIK-------------PTSSVWSTLLRACRVHKNTVLAEEV 462
Query: 175 ADMILMIEPNNTGAYVILIN 194
A I +EP + G++VIL N
Sbjct: 463 AKKIFELEPKSMGSHVILSN 482
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 115/279 (41%), Gaps = 82/279 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM---LMAKIKARHAP--- 141
A++ F E C ++ + +T + C G EGL+ F M + + K H
Sbjct: 415 ALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMV 474
Query: 142 --------------FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ M + +W LL ACR H N+ LAE A +L +EP N G
Sbjct: 475 DLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAG 534
Query: 188 AYVILIN----------------------------------------------------E 195
Y++L N
Sbjct: 535 PYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELS 594
Query: 196 ALKDLLERME----QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
++ +LE+++ + GY PD+ VL DV+EE+K L +H ERLA+ FG++ P+G I
Sbjct: 595 SIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPI 654
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RV+KNL K+++KI RE+I+RD RF HF
Sbjct: 655 RVMKNLRVCGDCHSAIKLIAKITGREIILRDANRF-HHF 692
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
+I + ++++++ + ++GYVPDT+ VLLDVE+E+K+ LYYH E+LA+ +G+ISTP TTI
Sbjct: 757 IIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTI 816
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RVIKNL + K +SK+ RE+++RD RF HF
Sbjct: 817 RVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRF-HHF 854
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 108/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------RIMHA 148
S+ + C G +EG ++F M M + R + M
Sbjct: 636 SLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPF 695
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EAL 197
+ +W LL ACR+H NV +AE+ A+ L ++ +N YV L + L
Sbjct: 696 QANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKL 755
Query: 198 KDLLER--------------------------------------------MEQEGYVPDT 213
+ L+E+ M+ +GYVPDT
Sbjct: 756 RKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDT 815
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ V+ DV+E +K+N + +H ERLA+ +G+ISTP GT I + KNL K +SKI
Sbjct: 816 RSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKI 875
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+I RD RF HF
Sbjct: 876 VDREIIARDVNRF-HHF 891
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 112/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFS-------------------RIMHA 148
S+ C NG ++G+ FF M+ +K R ++ R M
Sbjct: 296 SLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPL 355
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EALKD---- 199
+ +W TLLSACR+HRN ++A + A+ IL + P ++ YV+L N + KD
Sbjct: 356 EADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKV 415
Query: 200 -------------------------------------------LLERMEQ---EGYVPDT 213
L E ME+ GYVPDT
Sbjct: 416 RTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDT 475
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V D + E+K+N L H E+LA+ FG+++ P G+ IRV+KNL K++S I
Sbjct: 476 ATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDI 535
Query: 274 VHREMIVRDNRRFCRHF 290
+RE+IVRD RF HF
Sbjct: 536 NNREIIVRDTSRF-HHF 551
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 102/245 (41%), Gaps = 76/245 (31%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY S+ GC G+ G DE +F M P+ H T +W
Sbjct: 393 DYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSM----------PY----HPDHT--IWT 436
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EALKDL----------- 200
LL AC H +VE A + AD I+ + P ++G+YV L N E D+
Sbjct: 437 ILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRG 496
Query: 201 -----------------------------------LERME----QEGYVPDTKEVLLDVE 221
L R+E + GYVPD K VL +
Sbjct: 497 VFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAA 556
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E K+ + +H ERLA+ FG+IS+P GT +R++KNL K++SK R++IVR
Sbjct: 557 REAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVR 616
Query: 282 DNRRF 286
D RF
Sbjct: 617 DANRF 621
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
+I + ++++++ + ++GYVPDT+ VLLDVE+E+K+ LYYH E+LA+ +G+ISTP TTI
Sbjct: 395 IIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTI 454
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RVIKNL + K +SK+ RE+++RD RF HF
Sbjct: 455 RVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRF-HHF 492
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------- 153
+I + C G DEG FF M L KI+ + AG E
Sbjct: 372 AILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPM 431
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------- 192
+W LL A ++H+N+++ + A++++ + P+++GAYV L
Sbjct: 432 KPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAV 491
Query: 193 -----------------------INEAL---------KDLLERMEQ-------EGYVPDT 213
I+E L KD+ +E+ EG++PDT
Sbjct: 492 RLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDT 551
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+VLL ++E+ K+++L+YH E++A+ FG+ISTP T + ++KNL K++SK+
Sbjct: 552 TQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKM 611
Query: 274 VHREMIVRDNRRFCRHF 290
R++++RD +RF HF
Sbjct: 612 YERKIVIRDRKRF-HHF 627
>gi|296082000|emb|CBI21005.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 36/195 (18%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G +G DE L+F +M + + +VW TL++ CRV N+E+ ++
Sbjct: 488 GNSGYLDEALEFVEKMPLE----------------PSVDVWETLMNICRVQGNMEIGDRC 531
Query: 175 ADMILMIEPNNTGAYVIL-------------------INEALKDLLERMEQEGYVPDTKE 215
A+++ +EP+ + I L+ L +M++ GYVP+T+
Sbjct: 532 AELVEHLEPSRLTEQSKVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPETRF 591
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D+++E K+ L H ERLA+ +G++S+P + IRVIKNL K++SK+V
Sbjct: 592 VLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLVG 651
Query: 276 REMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 652 RELIIRDAKRF-HHF 665
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 31/202 (15%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
D+ I ++ C G+ G DE + APF T N+W
Sbjct: 463 DHKIKPRAMHYACMIELLGREGLLDEAFALI----------KDAPFK------PTVNMWA 506
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQEG 208
LL+ACRVH+N EL + A+ + + P YV+L+N E L+ + + G
Sbjct: 507 ALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAALMLEISKHG 566
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVP K +L DV +EQ++ +L YH E+LA+ FG+I+T D T ++++++ K
Sbjct: 567 YVPQDKFLLPDV-DEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSHRICGDCHSAIK 625
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+++ + RE++VRD RF HF
Sbjct: 626 LIALVTRREIVVRDASRF-HHF 646
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 111/263 (42%), Gaps = 87/263 (33%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS------------------ 150
++ C G D+G + F M A H I+H G
Sbjct: 570 ALLTACSHGGSVDQGRQLFWSMEKA-----HGIRPHIVHYGCMVDLLGRAGLLEEAVDLI 624
Query: 151 -------TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI------------ 191
+ VW +LL+ACR H+NVELA A+ + + P G +V+
Sbjct: 625 QSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWT 684
Query: 192 ---------------------------LINE----------------ALKDLLERMEQEG 208
LI+E L+++ R+ + G
Sbjct: 685 DVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAG 744
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPDT VLLDV+E++K+++L H E+LA+ +G+I+T G IRV+KNL K
Sbjct: 745 YVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAK 804
Query: 269 VVSKIVHREMIVRDNRRFCRHFL 291
+VSK+ +RE+ VRDN R+ HF
Sbjct: 805 LVSKLYNREITVRDNNRY--HFF 825
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 103/252 (40%), Gaps = 75/252 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------RIMHAG 149
+ GC G DEG ++F M M + R R M
Sbjct: 421 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK-- 198
+ VW LL ACR+HR+ +LAE ++ +EP N+G YV+L N EA K
Sbjct: 481 ANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVR 540
Query: 199 --------------------------------------------DLLERMEQEGYVPDTK 214
+L ++M+ GYVP T
Sbjct: 541 LSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTD 600
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE+K++ L H E+LA+ FG+IS IRV+KNL K++S I
Sbjct: 601 FVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSIT 660
Query: 275 HREMIVRDNRRF 286
RE+ VRDN RF
Sbjct: 661 GREITVRDNNRF 672
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 115/278 (41%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRN-----SITAGCGQNGPFDEGLKFFGQML--------------MA 133
A++ F E D+ S + S+ C G +EG K F M+ M
Sbjct: 362 AIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMV 421
Query: 134 KIKARH------APFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R A + VW +LL ACR+H +VELAE+ + + +EP N G
Sbjct: 422 DLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAG 481
Query: 188 AYVILIN-----------EALKDLLE---------------------------------- 202
YV+L + + +K LL+
Sbjct: 482 NYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQ 541
Query: 203 ----------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
M+Q GY P TK VL D+++E+K+ I+ H E+LA+ FG+I+T G TIR
Sbjct: 542 LHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIR 601
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SK RE++VRD RF HF
Sbjct: 602 ITKNLRLCEDCHSVTKFISKFADREIMVRDLNRF-HHF 638
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
+I + ++++++ + ++GYVPDT+ VLLDVE+E+K+ LYYH E+LA+ +G+ISTP TTI
Sbjct: 1472 IIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTI 1531
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RVIKNL + K +SK+ RE+++RD RF HF
Sbjct: 1532 RVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRF-HHF 1569
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 113/265 (42%), Gaps = 84/265 (31%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHA 140
RK+F+ M + DY I GC G++G F E + M M
Sbjct: 434 RKIFKSMTL-------DYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGV--- 483
Query: 141 PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------ 194
+W +LL AC++H+N+EL E +A ++ IEP N G+YV+L N
Sbjct: 484 -------------IWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSA 530
Query: 195 --------------EALKDL-------LERMEQEGYV-----PDTKE------------- 215
+ LK + ++ M E + P KE
Sbjct: 531 RWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLA 590
Query: 216 ----------VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
VL ++EEE K+ L YH E+LA+ FG+IST GT +R++KNL R
Sbjct: 591 ETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKNLRVCRNCHE 650
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K++SKI RE+I RD RF HF
Sbjct: 651 ATKLISKIYKREIIARDRSRF-HHF 674
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 130/324 (40%), Gaps = 121/324 (37%)
Query: 80 SRSGSVRK---VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
+R GS+ K VFE + RD L + ++ AG +G + LK+F M+ A +
Sbjct: 297 ARCGSIDKAVWVFEDLPERDTLSW-------TALIAGLAMHGYSERSLKYFATMVEAGLT 349
Query: 137 ARHAPFSRIM----HAGSTEN--------------------------------------- 153
R F+ ++ H G E
Sbjct: 350 PRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAER 409
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL ACR+H+N E+ E+V +++ + P ++G YV+L N
Sbjct: 410 FVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKE 469
Query: 195 -------------EALK---------------------------DLLERMEQE------- 207
+ LK D +ERM +E
Sbjct: 470 WEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRA 529
Query: 208 -GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GY +T + L D++EE+K++ L+ H E+LA+ FG++ + GT IR++KNL
Sbjct: 530 AGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTA 589
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K++SK+ RE+IVRD RF HF
Sbjct: 590 TKLISKVFGRELIVRDRNRF-HHF 612
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 113/279 (40%), Gaps = 90/279 (32%)
Query: 93 AVRDFLEYCDYAISRN-----SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMH 147
A++ F E D +S + S+ C G +EG F M+ H F + H
Sbjct: 371 AIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRG-----HKIFPSVEH 425
Query: 148 AGST-------------------------ENVWLTLLSACRVHRNVELAEKVADMILMIE 182
VW +LL +CR+H NVELAE+ + +E
Sbjct: 426 YACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELE 485
Query: 183 PNNTGAYVILIN-----------EALKDLLE----------------------------- 202
P N G YV+L + + +K LLE
Sbjct: 486 PTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFN 545
Query: 203 ---------------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD 247
M+++GYVPDTK VL D++ E+K+ I+ H E+LAL FG+I++
Sbjct: 546 PQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKK 605
Query: 248 GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
G TIR+ KNL K +SK +RE++VRD RF
Sbjct: 606 GETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRF 644
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 113/258 (43%), Gaps = 75/258 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAP---FSR----------I 145
A++ I C G ++G K+F M ++ +I+ FSR I
Sbjct: 346 AVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFI 405
Query: 146 MHAGSTEN--VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
M+ N VW LL C+VH+N++LAE+ + ++P N G YV+L N
Sbjct: 406 MNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWE 465
Query: 195 ------------------------------------------EALKDLLERMEQ----EG 208
E + E++ Q +G
Sbjct: 466 DVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKG 525
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVP+T VLLD+EE+QK+ LY H E+LA+VFG+I T GT IR++KNL K
Sbjct: 526 YVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALK 585
Query: 269 VVSKIVHREMIVRDNRRF 286
++S + RE++VRD RF
Sbjct: 586 IISVVSTREIVVRDRNRF 603
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 56/200 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------- 194
MH VW +LL +CR+H NVELAE+ + ++ +EP N G YV+L +
Sbjct: 449 MHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEA 508
Query: 195 EALKDLLE--------------------------------------------RMEQEGYV 210
+++ LLE M+ +GYV
Sbjct: 509 KSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYV 568
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P T VL D++EE+K+ I+ H E+LA+ FG+I+T G TIR+ KNL K +
Sbjct: 569 PQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFI 628
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SK +RE++VRD RF HF
Sbjct: 629 SKFANREILVRDVNRF-HHF 647
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 103/252 (40%), Gaps = 75/252 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------RIMHAG 149
+ GC G DEG ++F M M + R R M
Sbjct: 231 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 290
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK-- 198
+ VW LL ACR+HR+ +LAE ++ +EP N+G YV+L N EA K
Sbjct: 291 ANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVR 350
Query: 199 --------------------------------------------DLLERMEQEGYVPDTK 214
+L ++M+ GYVP T
Sbjct: 351 LSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTD 410
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE+K++ L H E+LA+ FG+IS IRV+KNL K++S I
Sbjct: 411 FVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSIT 470
Query: 275 HREMIVRDNRRF 286
RE+ VRDN RF
Sbjct: 471 GREITVRDNNRF 482
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 56/200 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------- 194
MH VW +LL +CR+H NVELAE+ + ++ +EP N G YV+L +
Sbjct: 449 MHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEA 508
Query: 195 EALKDLLE--------------------------------------------RMEQEGYV 210
+++ LLE M+ +GYV
Sbjct: 509 KSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYV 568
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P T VL D++EE+K+ I+ H E+LA+ FG+I+T G TIR+ KNL K +
Sbjct: 569 PQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFI 628
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SK +RE++VRD RF HF
Sbjct: 629 SKFANREILVRDVNRF-HHF 647
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 116/277 (41%), Gaps = 80/277 (28%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-- 145
AV+ F + +S N IT C G DEG + F M+ + R ++ +
Sbjct: 374 AVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVD 433
Query: 146 -----------------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA 188
MH + VW +LL ACR+HR+VE AE + +EP N G
Sbjct: 434 LLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGN 493
Query: 189 YVILIN-----------EALKDLLE----------------------------------- 202
YV+L + LKDLLE
Sbjct: 494 YVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGCSWIEVKKRLHMFVSVDNKNPQIEEL 553
Query: 203 ---------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRV 253
+M+ +GYVPDT VL D+EEE+K+ IL H E+LA+ FG+I+T G IR+
Sbjct: 554 QALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKILLGHSEKLAVAFGLINTGRGEVIRI 613
Query: 254 IKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL K +SK RE+IVRD RF HF
Sbjct: 614 TKNLRLCEDCHSVTKFISKYAEREIIVRDVNRF-HHF 649
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 75/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHA-------------------PFSRIMHAG 149
S+ C +G DEG +F M KI+A+ A F M
Sbjct: 412 SVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK 471
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
T VW LL ACR+H+N++L A+ I ++P+++G +V+L N
Sbjct: 472 PTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVR 531
Query: 195 --------------------------------EALKDLLERMEQE--------GYVPDTK 214
+++ ++RM ++ GYVPDT
Sbjct: 532 KMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 591
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL + ++ ++ L YH E+LAL F ++ TP G TIR+ KN+ K S+++
Sbjct: 592 HVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVL 651
Query: 275 HREMIVRDNRRFCRHFL 291
RE+IVRD RF HFL
Sbjct: 652 GREIIVRDTNRF-HHFL 667
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIM----HAGS-------TE 152
I+ +I + C G EG +F M + I +SR++ AG TE
Sbjct: 512 ITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTE 571
Query: 153 N--------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY--------------- 189
+ +W LL+ C +H N+EL + AD +L + P G Y
Sbjct: 572 SMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDE 631
Query: 190 -----------------------------VILINEA-----------LKDLLERMEQEGY 209
V L+++A L+ L+ M + GY
Sbjct: 632 VARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGY 691
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPDTK VL D+E EQK+ L H E+LA+V+GI+ P G TIRV KNL + K
Sbjct: 692 VPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKY 751
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+V RE+IVRD +RF HF
Sbjct: 752 ISKVVDREIIVRDRKRF-HHF 771
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN------ 153
++ + A C Q G +EG +F +M + +++ + + AG +
Sbjct: 395 VTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLIS 454
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
+W +LL +CRVH NV+LAE A+ + +EP N G YV+L N
Sbjct: 455 DMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDR 514
Query: 195 -----EALKD---------------------------------LLER-------MEQEGY 209
E +KD ++E+ M + G+
Sbjct: 515 VNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGF 574
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP T VL DVEE++K +IL H E+LA+ G+IST GTT+RVIKNL K
Sbjct: 575 VPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKF 634
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S RE+ VRD RF HF
Sbjct: 635 ISSFEGREISVRDTNRF-HHF 654
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 75/249 (30%)
Query: 113 GCGQNGPFDEGLKFFGQML----MAKIKARHA-PFSRIMHAGSTEN-------------- 153
C G E L+FF M+ +A + + I AG ++
Sbjct: 240 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 299
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEAL 197
W TLL+ACR+H E A KVA+++ + P ++ AY +L + +++
Sbjct: 300 VTWKTLLNACRIHSQAERATKVAELLAKLAPEDSMAYTLLGNVYAATERYGDQMRVRKSM 359
Query: 198 KD----------------------------------LLE------RMEQEGYVPDTKEVL 217
D LLE RM + GYVP+TK+VL
Sbjct: 360 TDRGLKKVPRKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 419
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
V EE+K+ ++ H E+LA+ FG+I+TP GT + ++KNL KV++KI+ R
Sbjct: 420 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 479
Query: 278 MIVRDNRRF 286
++VRD RF
Sbjct: 480 IVVRDTHRF 488
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 117/279 (41%), Gaps = 81/279 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRIM 146
A+R F I N IT C G DEGLK+F M I+ + +S I+
Sbjct: 408 AIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCII 467
Query: 147 ----HAGSTENV---------------WLTLLSACRVHRNVELAEKVADMILMIEPNNT- 186
AG + W +LL ACR+ N EL E AD ++ +EP+NT
Sbjct: 468 DMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTG 527
Query: 187 ------GAYVIL------------------------------------------------ 192
G Y L
Sbjct: 528 VHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEK 587
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L++L ER+++EGYVPDT+ + ++E+ K+ IL YH ER+A+ F +IS P I
Sbjct: 588 IYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALISMPATKPII 647
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
V KNL K +SK+ +R++IVRDN RF HF+
Sbjct: 648 VKKNLRICADCHSALKFISKVENRDIIVRDNSRF-HHFV 685
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLE 202
W+TLL+AC+ + + + + A+ + +EP ++G++V+L N ++ ++E
Sbjct: 419 AWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMME 478
Query: 203 RME--------------------------------------------QEGYVPDTKEVLL 218
RM + GYVPDT V+
Sbjct: 479 RMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVH 538
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEE K+ IL H ERLA+VFG++ST G TIRV+KNL K++S +V RE+
Sbjct: 539 DVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREI 598
Query: 279 IVRDNRRFCRHF 290
+VRD+ RF HF
Sbjct: 599 VVRDSSRF-HHF 609
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 110/292 (37%), Gaps = 110/292 (37%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTEN------- 153
+S S+ G QNG DE LK+F +L + K H F ++ HAG E
Sbjct: 388 VSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 447
Query: 154 --------------------------------------------VWLTLLSACRVHRNVE 169
+W ++L C + N++
Sbjct: 448 ITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNID 507
Query: 170 LAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQ--------------- 206
LAE+ A + IEP N YV + N E + +RM++
Sbjct: 508 LAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIK 567
Query: 207 --------------------------------EGYVPDTKEVLLDVEEEQKKNILYYHGE 234
EGYVP T VL DVE+EQK+ L YH E
Sbjct: 568 RKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSE 627
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+LA+ F I+ST +GT I+V KNL S K +SKI R++ +RD+ RF
Sbjct: 628 KLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRF 679
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLER 203
W+TLL+AC+ + + + + A+ + +EP ++G++V+L N ++ ++ER
Sbjct: 741 WMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMER 800
Query: 204 ME--------------------------------------------QEGYVPDTKEVLLD 219
M + GYVPDT V+ D
Sbjct: 801 MSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHD 860
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
VEE K+ IL H ERLA+VFG++ST G TIRV+KNL K++S +V RE++
Sbjct: 861 VEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIV 920
Query: 280 VRDNRRFCRHF 290
VRD+ RF HF
Sbjct: 921 VRDSSRF-HHF 930
>gi|297739162|emb|CBI28813.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 28/215 (13%)
Query: 80 SRSGSVRKVFEI---MAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
S+ GSV + E+ M ++ L + +++ G NG + L F QM M +K
Sbjct: 299 SKCGSVERALEVFHKMKEKNVLAW-------SAMINGLAINGQGKDALNLFSQMEMQGVK 351
Query: 137 ARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMIL-MIEPNNTGAYVILINE 195
F I++A S + +L ++ D I + +++ + +I
Sbjct: 352 PNEVTFIGILNACS----------------HSKLVDEGWDTIHEFVAGDSSHPQLEMIYA 395
Query: 196 ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
L ++ + ++ GY PDT +VLLD++EE+K+ L +H E+LA+ FG+I T GTTIR+ K
Sbjct: 396 KLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITK 455
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
NL K++SKI +RE+IVRD RF HF
Sbjct: 456 NLRVCADCHSATKLISKIYNREIIVRDRCRF-HHF 489
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 115/256 (44%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGS-TE----------- 152
+ C G EGLK+ GQM + K++ + AG TE
Sbjct: 710 VLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDE 769
Query: 153 ---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLL 201
+W +LLS+CR + ++E+ E+V+ +L +EPN YV+L N + ++ +
Sbjct: 770 PDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVR 829
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
+RM++ G Y PDT
Sbjct: 830 QRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTS 889
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL ++EEE K IL H E+LA+ FG+++T GTT+RV KNL + K+VSK+V
Sbjct: 890 CVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVV 949
Query: 275 HREMIVRDNRRFCRHF 290
R++IVRDN+RF HF
Sbjct: 950 KRDIIVRDNKRF-HHF 964
>gi|356500039|ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 591
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 89/166 (53%), Gaps = 31/166 (18%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI-------------------- 193
VW L RVH +V+L + ++I+ ++P+ A I
Sbjct: 417 VWEKLKHYARVHGDVDLEDYTEELIVSLDPSKAVANKIPTPPPKKYTAINMLDGRNRIIE 476
Query: 194 ---------NEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIS 244
+E LK L M++ GYVPDT+ VL D+++E K+ L YH ERLA+ +G+IS
Sbjct: 477 YKNPTLYKDDEKLK-ALSGMKETGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 535
Query: 245 TPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
TP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 536 TPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 580
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 56/202 (27%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
R M E W LLSAC+ H N ++A ++AD +L ++P + +Y++L N
Sbjct: 405 RTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWE 464
Query: 195 --------------------------------------EALKD----LLERMEQE----G 208
+ +KD L+ +++ E G
Sbjct: 465 NVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDSEMRRRG 524
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPDT VLLD+++++K+ L++H ERLAL +G++ GTTIR++KNL K
Sbjct: 525 YVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRVCGDCHTVLK 584
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++S I RE+ VRD +R+ HF
Sbjct: 585 LISAITSREIYVRDVKRY-HHF 605
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAG 149
+ + C +G D+G +F M M + +R F R M
Sbjct: 440 VLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVE 499
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ +W ++++AC ++L E VA ++ EP++ YV+L N
Sbjct: 500 PNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVR 559
Query: 195 ------------------------------------EALKDLLERMEQE----GYVPDTK 214
+ + +++E M +E GYVP T
Sbjct: 560 EMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTS 619
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VLLD++EE K++ LY H E+LA+ F ++STP GT IR++KNL K +SK+
Sbjct: 620 QVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVY 679
Query: 275 HREMIVRDNRRFCRHF 290
+RE++VRD RF HF
Sbjct: 680 NREIVVRDRNRF-HHF 694
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 107/261 (40%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAP------FSR 144
I+ SI + C +G EG + F M M I R F
Sbjct: 311 ITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIE 370
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP--------------------- 183
M VW LL ACR+H NV+LAE VA + ++P
Sbjct: 371 RMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKE 430
Query: 184 -------------------------NNTGAYVI---------LINEALKDLLERMEQEGY 209
N A+V LI L+ L++R+ QEGY
Sbjct: 431 ADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGY 490
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
PD VL DV+EE K+++LY H E+LA+VFG+++ G+ IR+ KNL K
Sbjct: 491 TPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKF 550
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE++VRD RF HF
Sbjct: 551 ISKVTGREIVVRDAHRF-HHF 570
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 121/289 (41%), Gaps = 81/289 (28%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------ 130
S R F A F E D + + +T + C G DEGL +F M
Sbjct: 827 SALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGV 886
Query: 131 ------------LMAKIK--ARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVAD 176
L+ + A F M E VW +LL+AC+VH N+EL K AD
Sbjct: 887 PTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAAD 946
Query: 177 MILMIEPNNTGAYVILIN--------------------EALK------------------ 198
+ + ++ AYV+ N ++LK
Sbjct: 947 RLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFG 1006
Query: 199 -----------------DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFG 241
+L + +EG++PDT L D +EEQK++ L+ H ER+AL FG
Sbjct: 1007 MGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFG 1066
Query: 242 IISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+I++ +G+ +R+ KNL K+VSKIV R+++VRD+ RF HF
Sbjct: 1067 LINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRF-HHF 1114
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 109/258 (42%), Gaps = 76/258 (29%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRI-------------------MH 147
++ + C +G DEG + F +M ++ R +S + M
Sbjct: 434 TAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMK 493
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
E+VW LLSACR+HRNV+LA A + + P+ YV L N
Sbjct: 494 LKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVEN 553
Query: 195 -----------------------------------EALKDLLERME-------QEGYVPD 212
E D+ +++ + GY PD
Sbjct: 554 VRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPD 613
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL DVEEE K+ +L+ H ERLAL F +I+T GTTIR+ KNL K++SK
Sbjct: 614 TSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISK 673
Query: 273 IVHREMIVRDNRRFCRHF 290
+ +RE+I+RD RF HF
Sbjct: 674 LTNREIIMRDICRF-HHF 690
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 68/94 (72%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L +L ++M++EGYV DT VL DVEEEQK+ ++YH E+LA+ FGIIST GT I+
Sbjct: 562 IHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIK 621
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V KNL + + K +SKIV R++IVRD+ RF
Sbjct: 622 VFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRF 655
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRIMHAGST 151
+ C G DEG ++F +M L+++ + I +
Sbjct: 326 VLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 385
Query: 152 EN--VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
N +W TLL AC +H ++ L E +L +EP ++G YV+L N
Sbjct: 386 PNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIR 445
Query: 195 -EALKD-----------------------------------LLERMEQ----EGYVPDTK 214
LKD LLE++ + EGYVP T
Sbjct: 446 RSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTA 505
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE+K+ L YH E++A+ F +++TP GT IRV+KNL K+++KI
Sbjct: 506 NVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIY 565
Query: 275 HREMIVRDNRRFCRHF 290
RE+++RD RF HF
Sbjct: 566 DREIVIRDRSRF-HHF 580
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 110/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS---RIMHAGST 151
S+ C G +EGL+FF M M + R R++ A +
Sbjct: 307 SLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366
Query: 152 EN---VWLTLLSACRVHRNVELA-------------------------------EKVA-- 175
E +W LL ACR+H +ELA EKVA
Sbjct: 367 EKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKF 426
Query: 176 -DMIL-----------MIEPNNTGAYVIL----------INEALKDLLERMEQEGYVPDT 213
DM+ IE +N + I E L L++++E GYVPDT
Sbjct: 427 RDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDT 486
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL DVEEE K+ +LY H E+LA+ FG+I+ P+G IR+ KNL +K+VS I
Sbjct: 487 DFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSI 546
Query: 274 VHREMIVRDNRRFCRHF 290
+ R +IVRD RF HF
Sbjct: 547 MRRSIIVRDANRF-HHF 562
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 119/313 (38%), Gaps = 118/313 (37%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM- 146
VFE M D I+ N++ GC QNG E +K F QM + I F ++
Sbjct: 743 VFEEMPEHDL-------ITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLC 795
Query: 147 ---HAGSTEN-------------------------------------------------- 153
HAG +
Sbjct: 796 ACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDS 855
Query: 154 -VWLTLLSACRVHRNVELAE-------------------------------KVA------ 175
+W LL ACR+HRNVEL + KVA
Sbjct: 856 VIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLM 915
Query: 176 -DMILMIEP-----------------NNTGAYVILINEALKDLLERMEQEGYVPDTKEVL 217
D L EP + T + I ALK+ GY+PDT VL
Sbjct: 916 KDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVL 975
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVEEEQK+N L YH E+LA+VFGI+STP+G+ I++IKNL K +SK+ R+
Sbjct: 976 HDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRK 1035
Query: 278 MIVRDNRRFCRHF 290
+I+RD RF HF
Sbjct: 1036 IIIRDGNRF-HHF 1047
>gi|358357244|gb|AEU08462.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L ERM++ GYVPDT+ VL DVEEEQK+ L YH E+LA+ FG+ISTP GT +R
Sbjct: 52 IHGELRRLAERMKETGYVPDTRFVLHDVEEEQKEFSLCYHSEKLAMAFGLISTPAGTPMR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K +SKIV R ++VRD RF HF
Sbjct: 112 IIKNLRVCGDCHTATKFISKIVGRVIVVRDANRF-HHF 148
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAG 149
+ GC G D+G ++F M M ++AR R M
Sbjct: 411 LLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPME 470
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK-- 198
+ VW LL CR+H++ +LAE V ++ +EP N+G YV+L N EA K
Sbjct: 471 ANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIR 530
Query: 199 -------------------------------------DLLERME-------QEGYVPDTK 214
+ E++E + GY P T+
Sbjct: 531 SSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTE 590
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DVEEE+K+ L H E+LA+ F +IST IRV+KNL K+VSK+
Sbjct: 591 FVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVT 650
Query: 275 HREMIVRDNRRFCRHF 290
RE+IVRDN RF HF
Sbjct: 651 GREIIVRDNNRF-HHF 665
>gi|357475405|ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509043|gb|AES90185.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 565
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 112/236 (47%), Gaps = 55/236 (23%)
Query: 93 AVRDFLEYCDYAISRNSITAGC----------GQNGPFDEGLKFFGQMLMAKIKARHAPF 142
AV D Y + S+ I G GQ+G E +F Q+ PF
Sbjct: 336 AVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQL----------PF 385
Query: 143 SRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI--------- 193
T V+ TL + R+H +V+L + V ++I+ ++P+ A I
Sbjct: 386 E------PTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAI 439
Query: 194 -------------NEAL-KD-----LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
N L KD + M+ GYVPDT+ VL D+++E K+ L YH E
Sbjct: 440 SMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSE 499
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RLA+ +G+ISTP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 500 RLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 554
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 75/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHA-------------------PFSRIMHAG 149
S+ C +G DEG +F M KI+A+ A F M
Sbjct: 413 SVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIK 472
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
T VW LL +CR+H+N++L A+ I ++P+++G +V+L N
Sbjct: 473 PTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVR 532
Query: 195 --------------------------------EALKDLLERMEQE--------GYVPDTK 214
+++ ++RM ++ GYVPDT
Sbjct: 533 KMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 592
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL + ++ ++ L YH E+LAL F ++ TP G TIR+ KN+ K S+++
Sbjct: 593 HVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVL 652
Query: 275 HREMIVRDNRRFCRHFL 291
RE+IVRD RF HFL
Sbjct: 653 GREIIVRDTNRF-HHFL 668
>gi|388508872|gb|AFK42502.1| unknown [Medicago truncatula]
Length = 565
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 112/236 (47%), Gaps = 55/236 (23%)
Query: 93 AVRDFLEYCDYAISRNSITAGC----------GQNGPFDEGLKFFGQMLMAKIKARHAPF 142
AV D Y + S+ I G GQ+G E +F Q+ PF
Sbjct: 336 AVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQL----------PF 385
Query: 143 SRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI--------- 193
T V+ TL + R+H +V+L + V ++I+ ++P+ A I
Sbjct: 386 E------PTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAI 439
Query: 194 -------------NEAL-KD-----LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
N L KD + M+ GYVPDT+ VL D+++E K+ L YH E
Sbjct: 440 SMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSE 499
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RLA+ +G+ISTP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 500 RLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 554
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 124/308 (40%), Gaps = 104/308 (33%)
Query: 86 RKVFEIMAVRDFLE-------YCDYAISRNSI-------TAG--------------CGQN 117
R++F++M RD Y + + R +I +AG C
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHA 664
Query: 118 GPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAGSTENVWLT 157
G DEG KFF M M + R F M +W
Sbjct: 665 GLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSA 724
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------------- 194
LL AC++H+N E+ ++ A+ + IEP+N G YV+L N
Sbjct: 725 LLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGV 784
Query: 195 -------------------------EALKDLLERMEQ-------EGYVPDTKEVLLDVEE 222
E +++++ +E+ GYVPDT+ VL D++E
Sbjct: 785 IKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDE 844
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
EQK++ L YH E+LA+ + +++TP G I+++KNL K VS + R++ +RD
Sbjct: 845 EQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRD 904
Query: 283 NRRFCRHF 290
RF HF
Sbjct: 905 GNRF-HHF 911
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 124/308 (40%), Gaps = 104/308 (33%)
Query: 86 RKVFEIMAVRDFLE-------YCDYAISRNSI-------TAG--------------CGQN 117
R++F++M RD Y + + R +I +AG C
Sbjct: 605 RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHA 664
Query: 118 GPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAGSTENVWLT 157
G DEG KFF M M + R F M +W
Sbjct: 665 GLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSA 724
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------------- 194
LL AC++H+N E+ ++ A+ + IEP+N G YV+L N
Sbjct: 725 LLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGV 784
Query: 195 -------------------------EALKDLLERMEQ-------EGYVPDTKEVLLDVEE 222
E +++++ +E+ GYVPDT+ VL D++E
Sbjct: 785 IKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDE 844
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
EQK++ L YH E+LA+ + +++TP G I+++KNL K VS + R++ +RD
Sbjct: 845 EQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRD 904
Query: 283 NRRFCRHF 290
RF HF
Sbjct: 905 GNRF-HHF 911
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 77/263 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMA-KIKARHAPFSRI----------------- 145
++S SI C G +EGL++F M K++ R ++ +
Sbjct: 543 SVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLM 602
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMIL-MIEPNNTGAYVILIN-------- 194
M E +W ++L++CR+H+N ELA K AD + M + YV + N
Sbjct: 603 ARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEW 662
Query: 195 -------EALKD----------------------------------------LLERMEQE 207
+AL++ L ++ME++
Sbjct: 663 DSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQ 722
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
GY PD+ L +V+EE K L YH ER+A+ F +ISTP G+ I V+KNL +
Sbjct: 723 GYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAI 782
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
KV+SKIV+RE+ VRD+ RF HF
Sbjct: 783 KVISKIVNREITVRDSSRF-HHF 804
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 114/267 (42%), Gaps = 62/267 (23%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDY-AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKAR 138
S+ GS+ A R+F E + +S N++ G Q+G E + F +M +
Sbjct: 567 SKCGSIED-----AKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPN 621
Query: 139 HAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMI----------------- 181
H F M +W TLLSAC VH+N+E+ E A +L +
Sbjct: 622 HVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAV 681
Query: 182 ---------------------EP--------NNTGAYVI---------LINEALKDLLER 203
EP N+ A+ + I E + DL ER
Sbjct: 682 SGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNER 741
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
+ GYV D +L DVE+EQK Y H E+LA+ FG++S + IRVIKNL
Sbjct: 742 AGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDC 801
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ K VSKI +R ++VRD RF HF
Sbjct: 802 HNWIKFVSKISNRAIVVRDAYRF-HHF 827
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 75/255 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM---AKIKARH-----------------APFSRIMHA 148
S+ C G +EG + F M K + H A + M
Sbjct: 391 SVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EAL 197
VW +LL +CR+H NVELAE+ + + +EP N G YV+L + + +
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Query: 198 KDLLER--------------------------------------------MEQEGYVPDT 213
K LLE M+++GY+P T
Sbjct: 511 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 570
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
K VL ++E E+K+ I+ H E+LAL FG+I+T G IR+ KNL K +SK
Sbjct: 571 KGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKF 630
Query: 274 VHREMIVRDNRRFCR 288
+ +E++VRD RF R
Sbjct: 631 MEKEILVRDVNRFHR 645
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 108/257 (42%), Gaps = 75/257 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTE------- 152
I+ +I C G D+GL++F M L K++ + AG +
Sbjct: 525 IAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIK 584
Query: 153 --------NVWLTLLSACRVHRNVELA-------------------------------EK 173
NVW LL ACR+H N+EL E
Sbjct: 585 NMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWED 644
Query: 174 VADMILMIE----PNNTGAYVILINEALKDLL--------------------ERMEQEGY 209
VA + M++ G V+ ++ ++ L E+M + GY
Sbjct: 645 VAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGY 704
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP+T L DVEEE K+NIL H E+LA+ FGII+T G IR++KNL + K
Sbjct: 705 VPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKF 764
Query: 270 VSKIVHREMIVRDNRRF 286
+SKIV RE+IVRD RF
Sbjct: 765 ISKIVGREIIVRDANRF 781
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + +++L M + GYVPDTK VL DV+EEQK+++L YH E+LA+ FG+ISTP+ +++
Sbjct: 829 IYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLH 888
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKI RE++VRDN RF HF
Sbjct: 889 IFKNLRVCEDCHTATKFISKITGREIVVRDNHRF-HHF 925
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W +LL ACRV ++++ + A +L ++P N+ A V+L N
Sbjct: 735 TWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSN 775
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 93/193 (48%), Gaps = 56/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------I 193
+W LL+ C++H+NVELAE ++ +EP + G YV+L
Sbjct: 439 IWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMT 498
Query: 194 NEALKDL-------------------------------LERME----QEGYVPDTKEVLL 218
N LK + LER+E Q GYVPDT V
Sbjct: 499 NRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFH 558
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+VE+++K+N++ H ERLA+ FG+ISTP GT + V KNL K++S+I RE+
Sbjct: 559 NVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREI 618
Query: 279 IVRDNRRFCRHFL 291
I+RD R+ HF+
Sbjct: 619 IIRDVNRY-HHFV 630
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFS-------------------RIMHA 148
S+ C G D+GL F M+ +KAR ++ R M
Sbjct: 408 SLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPV 467
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVA--------------------------------- 175
+ +W TLLSAC++H+N E+A +VA
Sbjct: 468 KADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEV 527
Query: 176 -----DMILMIEPNNTGAYV-----------------ILINEALKDLLERMEQEGYVPDT 213
D ++ EP + V + IN+ L++L ++++GYVPDT
Sbjct: 528 RRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDT 587
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D++ E+K+ IL +H E+LA+ F +++TP+G IRV+KNL K +S+I
Sbjct: 588 SSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEI 647
Query: 274 VHREMIVRDNRRFCRHF 290
E+IVRD+ RF HF
Sbjct: 648 KKLEIIVRDSSRF-HHF 663
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAG 149
+ + C G EG + F +M LM + + I M
Sbjct: 340 VLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIK 399
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ VW +LLSAC+VH N+E+ E AD I + +N G Y++L N
Sbjct: 400 PNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIR 459
Query: 195 ------------------------------------EALKDLLERMEQ----EGYVPDTK 214
E + D++++ME EGY PD
Sbjct: 460 TEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMS 519
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VLLDV+E++K+ L +H ++LA+ F +I T +G+ +R+ +NL K +S I
Sbjct: 520 QVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIY 579
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD+ RF HF
Sbjct: 580 EREITVRDSNRF-HHF 594
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 114/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIMH----AGSTEN------ 153
IS S+ + CGQ G DEG K+F M IK R +S +++ AG +
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA---------------- 188
VW LL++CR+ NV+LAE A+ + +EP N G
Sbjct: 550 EMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTE 609
Query: 189 ----------------------------YVIL-----------INEALKDLLERMEQEGY 209
Y +L I E + ++ + M + G+
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+ L DVEE++++ +L+ H E+LA+VFG+++TPDGT ++VIKNL K
Sbjct: 670 RPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKF 729
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S RE+ +RD RF HF
Sbjct: 730 ISSYAGREIFIRDTNRF-HHF 749
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
SR+G V K E+ + +S SI AGC QNG E L+ F +M +A +K H
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 140 APFSRIMHA 148
++ A
Sbjct: 389 VTIPSMLPA 397
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAG 149
+ + C G +EGL+ F +M LM + + I M
Sbjct: 340 VLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIK 399
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ VW +LLSAC+VH N+E+ E A+ I + +N G Y++L N
Sbjct: 400 PNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIR 459
Query: 195 ------------------------------------EALKDLLERMEQ----EGYVPDTK 214
E + D++++ME EGY PD
Sbjct: 460 TEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMS 519
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VLLDV+E++K+ L +H ++LA+ F +I T +G+ IR+ +NL K +S I
Sbjct: 520 QVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFISVIY 579
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD RF HF
Sbjct: 580 EREITVRDRNRF-HHF 594
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 75/255 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML--------------MAKIKARH------APFSRIMHA 148
S+ C G +EG + F M M + R A + M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EAL 197
VW +LL +CR+H NVELAE+ + + +EP N G YV+L + + +
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Query: 198 KDLLER--------------------------------------------MEQEGYVPDT 213
K LLE M+++GY+P T
Sbjct: 511 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 570
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
K VL ++E E+K+ I+ H E+LAL FG+I+T G IR+ KNL K +SK
Sbjct: 571 KGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKF 630
Query: 274 VHREMIVRDNRRFCR 288
+ +E++VRD RF R
Sbjct: 631 MEKEILVRDVNRFHR 645
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+VW TLL ACR+H++ LA V++ + ++P+N G +V+L N
Sbjct: 590 SVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTA 649
Query: 195 ---------------------------------EALKDLLERME----QEGYVPDTKEVL 217
+A+ + LE++E + GY P+T+ L
Sbjct: 650 KKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELAL 709
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVEEE+++ ++ H ERLA+ FG+I+T GT IR+IKNL K++SKI R
Sbjct: 710 HDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERV 769
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 770 IVVRDANRF-HHF 781
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 57/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W +LL+ACRV NVE+A A+ I ++ P TG+YV+L N
Sbjct: 640 IWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 699
Query: 195 --------------------------------EALKDLLERMEQE----GYVPDTKEVLL 218
++ +L+ + Q G+VPD VL+
Sbjct: 700 EKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLM 759
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DV+E++K +L H E+LA+ FG+IS+ GTTIR++KNL K SK+ +RE+
Sbjct: 760 DVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREI 819
Query: 279 IVRDNRRFCRHFL 291
I+RDN RF HF+
Sbjct: 820 ILRDNNRF--HFI 830
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 113/277 (40%), Gaps = 80/277 (28%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-- 145
A + F E + I N IT C DEG +FG M I+ + + ++ I
Sbjct: 361 AAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVD 420
Query: 146 -----------------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA 188
M T +W LL A ++H+N E+ A + ++P+ G
Sbjct: 421 LLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGT 480
Query: 189 YVILIN---------------------------------------------------EAL 197
+ +L N E +
Sbjct: 481 HTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKI 540
Query: 198 KDLLERMEQE----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRV 253
+ E++ Q+ GYVPDT VLL V++++K+ L YH E+LAL F +++TP G+TIR+
Sbjct: 541 HKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRI 600
Query: 254 IKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+KN+ K VS +V RE+IVRD RF HF
Sbjct: 601 MKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRF-HHF 636
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 73/231 (31%)
Query: 116 QNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVA 175
+NG FDE K +M PF +E +W ++L++CR+H+N ELA+K A
Sbjct: 592 RNGRFDEAEKLMTEM----------PFE------PSEIMWSSVLNSCRIHKNHELAKKAA 635
Query: 176 DMILMIEP--------NNTGAYVIL--------INEALKD-------------------- 199
D + +E N + Y + + +A++D
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHV 695
Query: 200 --------------------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L + ME++GY PDT L DV+E K L YH ER A+
Sbjct: 696 FSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIA 755
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
F +++TPDG+ I V+KNL + KV+S+IV RE+IVRD+ RF HF
Sbjct: 756 FALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRF-HHF 805
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 73/231 (31%)
Query: 116 QNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVA 175
+NG FDE K +M PF +E +W ++L++CR+H+N ELA+K A
Sbjct: 592 RNGRFDEAEKLMTEM----------PFE------PSEIMWSSVLNSCRIHKNHELAKKAA 635
Query: 176 DMILMIEP--------NNTGAYVIL--------INEALKD-------------------- 199
D + +E N + Y + + +A++D
Sbjct: 636 DRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHV 695
Query: 200 --------------------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L + ME++GY PDT L DV+E K L YH ER A+
Sbjct: 696 FSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIA 755
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
F +++TPDG+ I V+KNL + KV+S+IV RE+IVRD+ RF HF
Sbjct: 756 FALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRF-HHF 805
>gi|357501247|ref|XP_003620912.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495927|gb|AES77130.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 415
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 194 NEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRV 253
+E L+ L +M + GYVPDT+ VL D++EE+K+ L YH E LA+ +G+ISTP TT+R+
Sbjct: 309 DEKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSECLAIAYGLISTPPRTTLRI 368
Query: 254 IKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IKNL + K++SKIV RE+IVRDN+RF HF
Sbjct: 369 IKNLRICGDCHNAIKIMSKIVGRELIVRDNKRF-HHF 404
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 116/266 (43%), Gaps = 74/266 (27%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----------------LMAKIKARHAPFSRIMH 147
+S ++ C G +EG + F M L+ + H + +
Sbjct: 309 VSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNS 368
Query: 148 AGSTENV--WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------- 194
+ ++ W TLL A R HRNVE+AE V+ ++ + N+ G +V+L N
Sbjct: 369 MPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADV 428
Query: 195 ----EALK----------------------------------------DLLERMEQEGYV 210
EA+K ++ R+++ GYV
Sbjct: 429 GRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYV 488
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
+T VL D+ EE K+N+L +H E+LA+ FG+IST +GT I+VIKNL K++
Sbjct: 489 AETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLI 548
Query: 271 SKIVHREMIVRDNRRFCRHFLLFRAC 296
SKI RE+IVRD RF R F +C
Sbjct: 549 SKIYDREIIVRDRVRFHRFKEGFCSC 574
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I ++ L +M++ GY DTK VL DVEE++K+N+L+YH E+LA+ FG+ISTP G +R
Sbjct: 378 IYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLR 437
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
++KNL KV+SK+ RE++VRD RF HFL
Sbjct: 438 IVKNLRVCSDCHAATKVISKVTGREILVRDTNRF-HHFL 475
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 89/188 (47%), Gaps = 56/188 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKD---- 199
W L+S+C +H NV + E+V ++ +EP++ G YV L N +AL+
Sbjct: 389 WGALMSSCLMHNNVGVGERVGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEE 448
Query: 200 ------------------------------------LLERMEQE----GYVPDTKEVLLD 219
LLE MEQ GYV DT +VLLD
Sbjct: 449 RGAKKETGLSFIEWNGLVHEFRSGDTRHPQTRLIYALLEDMEQRLQLIGYVKDTSQVLLD 508
Query: 220 VE-EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++ EE K N L YH ERLAL FGI++ P IR++KNL R K+VSK+ RE+
Sbjct: 509 MDNEEDKGNTLSYHSERLALAFGILNIPHDMPIRIVKNLRVCRDCHVHAKLVSKLYQREI 568
Query: 279 IVRDNRRF 286
IVRD RF
Sbjct: 569 IVRDRHRF 576
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 111/285 (38%), Gaps = 80/285 (28%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------ 130
+G + F A+ F + + N +T + C G DE K F M
Sbjct: 541 NGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGI 600
Query: 131 --------LMAKIKARHAPFSRI------MHAGSTENVWLTLLSACRVHRNVELAEKVAD 176
M + R S M + VW T L +CRVHRN +L E A
Sbjct: 601 VPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK 660
Query: 177 MILMIEPNNTGAYVILIN--------EALKDLLERMEQE--------------------- 207
MIL EP++ Y++L N E + + + M+Q+
Sbjct: 661 MILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFH 720
Query: 208 --------------------------GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFG 241
GYVP+T VL DVE+EQK+ L+ H E+LA+ F
Sbjct: 721 VGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFA 780
Query: 242 IISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ISTP+ IRV KNL K +S + RE++VRD RF
Sbjct: 781 LISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRF 825
>gi|218200488|gb|EEC82915.1| hypothetical protein OsI_27839 [Oryza sativa Indica Group]
Length = 393
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 89 FEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIMH 147
FE M VR+ +S N++ AG +N D+ L+ F M+ A ++ + S ++
Sbjct: 197 FEAMPVRNL-------VSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLL 249
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNT--GAYVILINEALKDLLERME 205
S LSA + + M L + N T + + LI+E L L ERM+
Sbjct: 250 GCSN-------LSALGFGKQIHQW----CMKLPLSRNLTVGTSLLYLIHEKLGQLAERMK 298
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
GYVPD VL DV+E K +L H E+LA+ FG+IST G T+R+ KNL +
Sbjct: 299 AMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHN 358
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
KV+SKI RE+I+RD RF HF
Sbjct: 359 AAKVISKIEDREIILRDTTRF-HHF 382
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + +++L M + GYVPDTK VL DV+EEQK+++L YH E+LA+ FG+ISTP+ +++
Sbjct: 580 IYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLH 639
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKI RE++VRDN RF HF
Sbjct: 640 IFKNLRVCEDCHTATKFISKITGREIVVRDNHRF-HHF 676
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
W +LL ACRVH++++ + A +L ++P N+ A V+L N
Sbjct: 486 TWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSN 526
>gi|225428796|ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
[Vitis vinifera]
Length = 593
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 31/166 (18%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEP-----NNT---------------------- 186
VW L++ ++H +++L + ++++ ++P N T
Sbjct: 419 VWEALMNYAKIHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKKRTAINMLDGKNRLSE 478
Query: 187 --GAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIS 244
+ +E LK L M++ GYVPDT+ VL D+++E K+ L YH ERLA+ +G+IS
Sbjct: 479 FRNPTLYKDDEKLKSL-NGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 537
Query: 245 TPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
TP T +R+IKNL + K++SKIV RE+IVRDN+RF HF
Sbjct: 538 TPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRF-HHF 582
>gi|190612933|gb|ACE80844.1| pentatricopeptide repeat protein [Fossombronia pusilla]
Length = 152
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L+ LLE+M + GYVPDT+ VL D+EE++K L +H E+LA+ +G+ISTP GTTIR
Sbjct: 52 IHEELQRLLEQMVEAGYVPDTRSVLHDLEEDEKVAHLSHHSEKLAIAYGLISTPPGTTIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL +K++SKIV R ++VRD RF HF
Sbjct: 112 IYKNLRVCLDCHTASKLMSKIVMRSLVVRDANRF-HHF 148
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 56/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------I 193
+W LL+ C++H+NVELAE ++ +EP + G YV+L
Sbjct: 444 IWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMT 503
Query: 194 NEALKDL-------------------------------LERME----QEGYVPDTKEVLL 218
N LK + LER+E Q GYVPDT V
Sbjct: 504 NRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFH 563
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+VE+++K+N+++ H ERLA+ FG+ISTP T + V KNL K++S+I RE+
Sbjct: 564 NVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREI 623
Query: 279 IVRDNRRFCRHFL 291
I+RD R+ HF+
Sbjct: 624 IIRDVNRY-HHFV 635
>gi|357137130|ref|XP_003570154.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Brachypodium distachyon]
Length = 622
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 77/256 (30%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAG 149
I C ++G +EGL+ F +M M + AR M G
Sbjct: 355 ILNACSRSGLLEEGLRCFDRMRLEHKVAPNAQHYGCMVDLMARAGRLDDARALIGSMPTG 414
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
T+ W +LL+ACR+H NVELAE+ + I N G YVIL +
Sbjct: 415 PTDAAWRSLLNACRIHGNVELAERALQGLSGIGAVNAGDYVILADMHARTKNWDAAAALR 474
Query: 195 ------------------------------------EALKDLLERMEQ----EGYVPDTK 214
+ ++L +ME EGY PDT
Sbjct: 475 TEAANRGLAQAPGFSAVEVHGRAHRFASQDRSHPRTAEIYEMLHQMEWQLRFEGYEPDTS 534
Query: 215 EVLL--DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
EV L D EE+K+ + H ++LA+ FG++STP+GT +RV+ NL + + ++S+
Sbjct: 535 EVALTRDAGEEEKRRAVAAHSQKLAMAFGLLSTPEGTPVRVVTNLRMSKECHAYSALISE 594
Query: 273 IVHREMIVRDNRRFCR 288
I RE++VRD RF R
Sbjct: 595 IFGREVVVRDRNRFHR 610
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 75/252 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE---------------N 153
C +G EG FF +M KI + ++ ++ AG +
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
VW LLSAC+ HR+VEL E A + I+P+NTG YV L N + + ++ RM+
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
++G +V + L
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ +E+ + L H ER+A+ +G+ISTP GT +R+ KNL + K++SK+V RE+
Sbjct: 613 DLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREI 672
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 673 VVRDTNRF-HHF 683
>gi|219362609|ref|NP_001136847.1| uncharacterized protein LOC100216998 [Zea mays]
gi|194697336|gb|ACF82752.1| unknown [Zea mays]
Length = 210
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 56/200 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNV----ELAEKV--------------------------- 174
M T +VW TLL ACRVH+N E+A+K+
Sbjct: 1 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 60
Query: 175 ------------------------ADMILMIEPNNTGAYVILINEALKDLLERMEQEGYV 210
+ + + + + + + I +AL E+M +EG+V
Sbjct: 61 AHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHV 120
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P+T++V D+EEE K +L H E+LA+VFGIISTP GT IRV+KNL K +
Sbjct: 121 PNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFI 180
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SK+ RE++VRD RF HF
Sbjct: 181 SKLADREIVVRDANRF-HHF 199
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 118/278 (42%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML--------------MA 133
A+ F E + I+ +T C G EG + F M+ M
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMV 564
Query: 134 KIKARHAPFSRIMH---AGSTE---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
I R R + A S E +VW TLL ACR+H++ LA V++ + ++P+N G
Sbjct: 565 DILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVG 624
Query: 188 AYVILIN------------------------------------------------EALKD 199
+V+L N +K+
Sbjct: 625 YHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKE 684
Query: 200 LLERME-------QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+ E++E + GY P+T+ L DVEEE+++ ++ H ERLA+ FG+I+T GT IR
Sbjct: 685 IYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIR 744
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K++SKI R ++VRD RF HF
Sbjct: 745 IIKNLRVCLDCHTVTKLISKITERVIVVRDANRF-HHF 781
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 110/263 (41%), Gaps = 87/263 (33%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGST----------------- 151
++ C G DEGL F M K K + P R+ H G
Sbjct: 420 ALLCACSHAGLVDEGLAMFQAM---KNKFQIEP--RMEHYGCVVDLLCRARKVDDALAFI 474
Query: 152 EN--------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
EN +W TLL ACR + +LAEK+ ++ +EP++ G YV+L N
Sbjct: 475 ENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWD 534
Query: 195 ------------------------------------------EALKDLLERMEQE----- 207
E + ++E M +
Sbjct: 535 HALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDG 594
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VP T VL D+EEE+K++ L+ H E+LA+ G+ISTP G+ IR++KNL
Sbjct: 595 GHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFL 654
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
KV SK+ +RE++ RD RF HF
Sbjct: 655 KVTSKVYNREIVARDRSRF-HHF 676
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 113/262 (43%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKAR----HAPFSRI 145
+++ + +GC + +EGL+ F M M + +R H + I
Sbjct: 470 SVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFI 529
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------- 190
M T + W LL ACRV++NVELA+ A+ + IEPNN G YV
Sbjct: 530 QRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWS 589
Query: 191 ------ILINEA------------------------------------LKDLLERMEQEG 208
IL+ E L +L E+M+ G
Sbjct: 590 EASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAG 649
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y PDT VL D+++E+K L H E+LA+ FGI++ ++IRV KNL + K
Sbjct: 650 YKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIK 709
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
VSK+V +IVRD+ RF HF
Sbjct: 710 YVSKVVGVTIIVRDSLRF-HHF 730
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 110/252 (43%), Gaps = 76/252 (30%)
Query: 114 CGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIMH-------------------AGSTEN 153
CG G ++GL F M M +IK ++ I+ + +
Sbjct: 564 CGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPM 623
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
VW LLS+C VH+NV L + A+ +L IEP + YV+L N ++++
Sbjct: 624 VWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMR 683
Query: 199 DL-------LERMEQEGYV---------------------------------PDTKEVLL 218
++ L +E +G V PD VL
Sbjct: 684 NIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLH 743
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DV+EE+K +L+ H ERLAL +G+ TP G IR++KNL S KV+SKIV RE+
Sbjct: 744 DVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREI 803
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 804 VVRDINRF-HHF 814
>gi|147834943|emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
Length = 627
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 31/166 (18%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEP-----NNT---------------------- 186
VW L++ ++H +++L + ++++ ++P N T
Sbjct: 453 VWEALMNYAKIHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKKRTAINMLDGKNRLSE 512
Query: 187 --GAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIS 244
+ +E LK L M++ GYVPDT+ VL D+++E K+ L YH ERLA+ +G+IS
Sbjct: 513 FRNPTLYKDDEKLKSL-NGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 571
Query: 245 TPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
TP T +R+IKNL + K++SKIV RE+IVRDN+RF HF
Sbjct: 572 TPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRF-HHF 616
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 110/263 (41%), Gaps = 87/263 (33%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGST----------------- 151
++ C G DEGL F M K K + P R+ H G
Sbjct: 218 ALLCACSHAGLVDEGLAMFQAM---KNKFQIEP--RMEHYGCVVDLLCRARKVDDALAFI 272
Query: 152 EN--------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
EN +W TLL ACR + +LAEK+ ++ +EP++ G YV+L N
Sbjct: 273 ENMPIKANSVLWATLLGACRSGGHFDLAEKIXRRVIELEPDSCGRYVMLSNLYAGVSQWD 332
Query: 195 ------------------------------------------EALKDLLERMEQE----- 207
E + ++E M +
Sbjct: 333 HALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDG 392
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VP T VL D+EEE+K++ L+ H E+LA+ G+ISTP G+ IR++KNL
Sbjct: 393 GHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFL 452
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
KV SK+ +RE++ RD RF HF
Sbjct: 453 KVTSKVYNREIVARDRSRF-HHF 474
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW TLL++CR H+N+E+AEK + I +EP ++G Y++L N
Sbjct: 494 VWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIK 553
Query: 195 --------------------------------EALKDLLERMEQE----GYVPDTKEVLL 218
+ + D L++M ++ GYVP+T + L
Sbjct: 554 EKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARL 613
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+ EEE K+ + +H E+LA+ +G+I T TTIR+ KNL R + K +S++ R +
Sbjct: 614 EAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMI 673
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 674 IVRDRNRF-HHF 684
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 110/263 (41%), Gaps = 87/263 (33%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGST----------------- 151
++ C G DEGL F M K K + P R+ H G
Sbjct: 322 ALLCACSHAGLVDEGLAMFQAM---KNKFQIEP--RMEHYGCVVDLLCRARKVDDALAFI 376
Query: 152 EN--------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
EN +W TLL ACR + +LAEK+ ++ +EP++ G YV+L N
Sbjct: 377 ENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWD 436
Query: 195 ------------------------------------------EALKDLLERMEQE----- 207
E + ++E M +
Sbjct: 437 HALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDG 496
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VP T VL D+EEE+K++ L+ H E+LA+ G+ISTP G+ IR++KNL
Sbjct: 497 GHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFL 556
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
KV SK+ +RE++ RD RF HF
Sbjct: 557 KVTSKVYNREIVARDRSRF-HHF 578
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 75/252 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE---------------N 153
C +G EG FF +M KI + ++ I+ AG +
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
VW LLSAC+ HR+VEL + A + I+P+NTG YV L N + + ++ RM+
Sbjct: 493 VWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
++G +V + L
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ +E+ + L H ER+ + +G+ISTP GTT+R+ KNL + K++SK+V RE+
Sbjct: 613 DLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREI 672
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 673 VVRDTNRF-HHF 683
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 104/248 (41%), Gaps = 77/248 (31%)
Query: 103 YAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLT 157
Y I+ N + GC G+ G E L QM M +W T
Sbjct: 386 YNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTP----------------NSTIWGT 429
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALK------------------- 198
LL+ACRVH N E+ E VA+ +L ++P N+ Y++L N K
Sbjct: 430 LLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGI 489
Query: 199 ---------------------DLLERMEQEGY---------------VPDTKEVLLDVEE 222
D M +E Y PD EV ++V E
Sbjct: 490 KKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAE 549
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
++KK +LY+H E+LA+ F ++S+ T IR++KNL + K++S++ RE++VRD
Sbjct: 550 KEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRD 609
Query: 283 NRRFCRHF 290
RF HF
Sbjct: 610 RTRF-HHF 616
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 120/280 (42%), Gaps = 85/280 (30%)
Query: 95 RDFLEYCDY---------AISRNSITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFS- 143
R+ LEY D ++ S+ + C G +EG K F M + IK +S
Sbjct: 434 REALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 493
Query: 144 ------RIMHAGSTENV------------WLTLLSACRVHRNV----------------- 168
R H ENV W LLSACRVH +V
Sbjct: 494 FVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDD 553
Query: 169 -----------------ELAEKVADMI----LMIEPNNTG------AYVILINEA----- 196
E AEKV ++ ++ EP + +V + +
Sbjct: 554 DGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPES 613
Query: 197 ------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTT 250
L L E++++ GYVPDT+ VL DV+EEQK+ IL+ H ERLA+ +G++ TP G
Sbjct: 614 EQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMP 673
Query: 251 IRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR++KNL K +SK+V RE+I RD +RF HF
Sbjct: 674 IRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRF-HHF 712
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 124/317 (39%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S R+VFE + RD IS ++ G Q+G +E L + +M++A K F
Sbjct: 291 SAREVFEGITFRD-------VISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 343
Query: 144 RIM----HAG-------------------------------------------------- 149
++ HAG
Sbjct: 344 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 403
Query: 150 -STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
E W LLSAC +++ E+ +++D +L + P ++ Y++L N
Sbjct: 404 EPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKV 463
Query: 195 -------------------------------------EALKDLLERM----EQEGYVPDT 213
E + LE M + GYVPDT
Sbjct: 464 RKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDT 523
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V+ D+EE +K++ L+ H ERLA+ FG+I +P G+ IRV+KNL K++S+I
Sbjct: 524 SSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEI 583
Query: 274 VHREMIVRDNRRFCRHF 290
HR+++VRD+ RF HF
Sbjct: 584 THRKIVVRDSSRF-HHF 599
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 115/285 (40%), Gaps = 94/285 (32%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLM--------------- 132
A+ F E S + IT +GC G D+G + F M M
Sbjct: 363 AMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLV 422
Query: 133 ------AKIK-----ARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMI 181
+IK ++ PF T ++W +LL++CR+H NV LAE VA + +
Sbjct: 423 DVLGRAGRIKEALEIVKNMPFK------PTGSIWGSLLNSCRLHGNVPLAEAVAKRLFEL 476
Query: 182 EPNNTGAYVILIN-----------EALKDLLER--------------------------- 203
EPNN G YV+L N + +++ +E+
Sbjct: 477 EPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSN 536
Query: 204 ------------------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
ME+ GYVPDT VL DV EE + + H ERLA +F +I+T
Sbjct: 537 EFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINT 596
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
G IR+ KNL K +SK+ R +++RD RF HF
Sbjct: 597 ASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRF-HHF 640
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 85/188 (45%), Gaps = 56/188 (29%)
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------------- 194
LLS CR H+N+ L + +D +L ++ N G Y++L N
Sbjct: 608 LLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGL 667
Query: 195 ----------------------------EALKDLLERM----EQEGYVPDTKEVLLDVEE 222
E + LE + E GYVPDT VL DV+E
Sbjct: 668 KKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDE 727
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
E K +L+ H ERLA+ FG+++TP G+ IR+ KNL K +SKIV RE+IVRD
Sbjct: 728 EMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRD 787
Query: 283 NRRFCRHF 290
RF HF
Sbjct: 788 ANRF-HHF 794
>gi|297602164|ref|NP_001052155.2| Os04g0174800 [Oryza sativa Japonica Group]
gi|255675179|dbj|BAF14069.2| Os04g0174800 [Oryza sativa Japonica Group]
Length = 299
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E +++ ++ PF T+ VW +LL+ R++ +++L ++
Sbjct: 109 GKSGHLNEAVEYIEKL----------PFE------PTDTVWESLLNLARMNGDIDLEDRA 152
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P + L+ L +E+ + ++ YVPDT
Sbjct: 153 EELLVSLDPTKVNPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 212
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 213 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 272
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 273 VGRELIVRDNKRF-HHF 288
>gi|218199901|gb|EEC82328.1| hypothetical protein OsI_26611 [Oryza sativa Indica Group]
Length = 507
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 66/92 (71%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I +AL E+M ++GYVP+ ++VL D+EEEQK+ +L H E+LA+VFGIISTP GTTIR
Sbjct: 338 IIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIR 397
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNR 284
V+KNL K +SKIV RE++VRD +
Sbjct: 398 VMKNLRVCVDCHTATKFISKIVAREIVVRDGQ 429
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 96 DFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVW 155
D +C +S G+ G DE F +M KIK T +VW
Sbjct: 202 DRTWWCQEFSFLSSCWDTLGRAGDLDEAYNFISEM---KIKP-------------TSSVW 245
Query: 156 LTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
TLL ACRVH+N LAE+VA I +EP + G++VIL N
Sbjct: 246 STLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSN 284
>gi|38347147|emb|CAD39490.2| OSJNBa0039G19.7 [Oryza sativa Japonica Group]
Length = 557
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E +++ ++ PF T+ VW +LL+ R++ +++L ++
Sbjct: 367 GKSGHLNEAVEYIEKL----------PFE------PTDTVWESLLNLARMNGDIDLEDRA 410
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P + L+ L +E+ + ++ YVPDT
Sbjct: 411 EELLVSLDPTKVNPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 470
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 471 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 530
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 531 VGRELIVRDNKRF-HHF 546
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 115/257 (44%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIMH-------------------A 148
S+ + CG G ++GL F M+M +IK ++ I+ +
Sbjct: 557 SLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPS 616
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+ VW LLS+C VH+NV L A+ +L IEP++ YV+L N
Sbjct: 617 TPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALW 676
Query: 195 -EALKDL-------LERMEQEGYV----------PDTK---------------------- 214
++++++ L +E +G V PD +
Sbjct: 677 RKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDI 736
Query: 215 -EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL DV+EE+K +L+ H ERLAL +G+ TP G IR++KNL S KV+SKI
Sbjct: 737 NVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKI 796
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRD RF HF
Sbjct: 797 VQREIIVRDINRF-HHF 812
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 138/337 (40%), Gaps = 79/337 (23%)
Query: 26 FMDKANGITDRFEERAVSIGHYADLDGISDQLPSSSGGRQVDIH-FDGGVDGLRPSRSGS 84
+D+ +T+ F A+ I YA ++ ++ DI + + GL +++G
Sbjct: 338 LIDRHEFLTNLFMANAL-IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL--AKNGH 394
Query: 85 VRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR 144
V+ F + + L + + GC G +GL+FF + R
Sbjct: 395 VKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYG 454
Query: 145 IM-----HAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILMIEPN 184
M AG ++ VW LLS CR+ ++ +LAE V ++ +EP
Sbjct: 455 CMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPW 514
Query: 185 NTGAYVILIN---------EA--LKDLLER------------------------------ 203
N G YV L N EA ++D++ +
Sbjct: 515 NAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPL 574
Query: 204 --------------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
M G+VP T+ V DVEEE+K+ +L YH E+LA+ G+IST G
Sbjct: 575 SDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQ 634
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
IRV+KNL K++SKI RE++VRDN RF
Sbjct: 635 VIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRF 671
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL AC VH++ +LA+ + + +EP NTG YV+L N
Sbjct: 595 IWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAK 654
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
+A+ LE+ M + GY PDT+ L
Sbjct: 655 SRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALY 714
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEEE+K++++ H E+LA+ FG+++T GT IR+IKNL + K++SK+ R +
Sbjct: 715 DVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLI 774
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 775 VVRDASRF-HHF 785
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 105/249 (42%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY IS GC ++G FDE G M M A +W
Sbjct: 494 DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGA----------------IWG 537
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQEG 208
+LL+ACR+H VE E VA+ + +EP N+GAYV+L N + + + ++ +G
Sbjct: 538 SLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKG 597
Query: 209 Y--VPDTKEVLLD---------------------------------------------VE 221
VP + +D ++
Sbjct: 598 MKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMD 657
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EE K+ L H E+LA+ FG+IST G+TIR++KNL R K++SKI +RE+I R
Sbjct: 658 EEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIAR 717
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 718 DRNRF-HHF 725
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 112/257 (43%), Gaps = 77/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG--------------- 149
I C NG +EG ++F M ++ IK + AG
Sbjct: 320 ILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIK 379
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------INEAL 197
T +W TLLSAC H NVE+ ++V + I ++ ++ G YVI +N
Sbjct: 380 PTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLR 439
Query: 198 KDLLER-------------------------------------------MEQEGYVPDTK 214
K ++++ ++ GYVPDT
Sbjct: 440 KTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTS 499
Query: 215 EVLL-DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V D+E+E+K+ IL YH E+LA+ FG+++TP GTTIRV+KNL + K +S I
Sbjct: 500 LVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLI 559
Query: 274 VHREMIVRDNRRFCRHF 290
R++I+RD +RF HF
Sbjct: 560 FGRQIILRDVQRF-HHF 575
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 104/246 (42%), Gaps = 76/246 (30%)
Query: 101 CDYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVW 155
C YA+ R GC G+ G D+ + M M VW
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR----------------PNAIVW 485
Query: 156 LTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EA--LKDLLER- 203
LLS CR+ ++ +LAE V ++ +EP N G YV L N EA ++D++ R
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRK 545
Query: 204 -------------------------------------------MEQEGYVPDTKEVLLDV 220
M G+VP T+ V DV
Sbjct: 546 GMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDV 605
Query: 221 EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIV 280
E+E+K+ +L +H E+LA+ FG+IST G IRV+KNL K++SKI RE++V
Sbjct: 606 EDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVV 665
Query: 281 RDNRRF 286
RDN RF
Sbjct: 666 RDNNRF 671
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY----------------------- 189
+VW LLSAC+++R V L E A+ + ++P NTG Y
Sbjct: 525 SVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLM 584
Query: 190 ------------VILINEALK----------------DLLERMEQE----GYVPDTKEVL 217
VI IN L+ D L+R+E+ G+VP T+ VL
Sbjct: 585 REKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVL 644
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D+ E+K+ L +H ER+A+ +G+IST GTT+R+ KNL + K++SK+V RE
Sbjct: 645 HDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVERE 704
Query: 278 MIVRDNRRFCRHF 290
+IVRD RF HF
Sbjct: 705 IIVRDANRF-HHF 716
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W +L+AC++H+N + E A +L +EP N G V++ N +A+K
Sbjct: 504 IWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVK 563
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D + +++++ GY+PDT VL
Sbjct: 564 DTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLH 623
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+++EE+K+ L YH E+LA+ FG+IST GT IRV+KNL K++SKI R +
Sbjct: 624 NIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVI 683
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 684 IVRDRNRF-HHF 694
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 114/285 (40%), Gaps = 80/285 (28%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML----- 131
+G + F A+ F + + + N +T + C G +EG K F M
Sbjct: 551 TGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGV 610
Query: 132 ---------MAKIKARHAPFSRI------MHAGSTENVWLTLLSACRVHRNVELAEKVAD 176
M I R S M + VW T L ACRVH N+EL + A
Sbjct: 611 IPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAK 670
Query: 177 MILMIEPNNTGAYVI-------------------------LINEA--------------- 196
MI+ EP++ AY++ LI EA
Sbjct: 671 MIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFY 730
Query: 197 ---------------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFG 241
L++L ++++ GYVP+ VL DVEEEQK+ +L+ H E++A+ FG
Sbjct: 731 VGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFG 790
Query: 242 IISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+IST IRV KNL K +S RE+IVRD RF
Sbjct: 791 LISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRF 835
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I ++ L +M++ GY DTK VL DVEE++K+N+L+YH E+LA+ FG+ISTP G +R
Sbjct: 545 IYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLR 604
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL KV+SK+ RE++VRD RF HF
Sbjct: 605 IVKNLRVCSDCHAATKVISKVTGREILVRDTNRF-HHF 641
>gi|293334013|ref|NP_001167864.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
gi|223944527|gb|ACN26347.1| unknown [Zea mays]
gi|413946729|gb|AFW79378.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 578
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 106/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E L+F ++ PF VW +LL+ R++ +++L ++
Sbjct: 388 GKSGHLNEALEFIEKL----------PFE------PNAMVWESLLNLARMNGDIDLEDRA 431
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P+ + + L+ L +E+ + ++ YVPDT
Sbjct: 432 EELLVSLDPSKSNHKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 491
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 492 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 551
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 552 VGRELIVRDNKRF-HHF 567
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--EALKDLLE------RME 205
VWL LLSACRVH ++++AE+ A I +EP+ + AYV+L N + + LE +M+
Sbjct: 526 VWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMK 585
Query: 206 QEGYV-----------------------------------------------PDTKEVLL 218
G V PD + L
Sbjct: 586 HNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALH 645
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVE EQ + +L YH ERLA+ FG++ST +G+TI ++KNL +++KIV+RE+
Sbjct: 646 DVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREI 705
Query: 279 IVRDNRRFCRHF 290
+VRD+ RF HF
Sbjct: 706 VVRDSSRF-HHF 716
>gi|259490048|ref|NP_001159270.1| uncharacterized protein LOC100304360 [Zea mays]
gi|223943115|gb|ACN25641.1| unknown [Zea mays]
gi|413948667|gb|AFW81316.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 580
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E L+F ++ PF VW +LL+ R++ +++L ++
Sbjct: 390 GKSGHLNEALEFIEKL----------PFE------PNAMVWESLLNLARMNGDIDLEDRA 433
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P+ + L+ L +E+ + ++ YVPDT
Sbjct: 434 EELLVSLDPSKANPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 493
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 494 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 553
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 554 VGRELIVRDNKRF-HHF 569
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 91/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLL- 201
VW LLS R+H ++E E ++ +EP N+GAYV+L N ++DL+
Sbjct: 371 VWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLME 430
Query: 202 -------------------------------------------ERMEQEGYVPDTKEVLL 218
ER++ EGYV +TKEVLL
Sbjct: 431 TMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLL 490
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++EE K+ L H E+LAL +G + T GT IR++KNL R K++SK+ RE+
Sbjct: 491 DLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREI 550
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 551 IVRDCNRF-HHF 561
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 115/285 (40%), Gaps = 94/285 (32%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLM--------------- 132
A+ F E S + IT +GC G D+G + F M M
Sbjct: 364 AMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLV 423
Query: 133 ------AKIK-----ARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMI 181
+IK ++ PF T ++W +LL++CR+H NV LAE VA + +
Sbjct: 424 DVLGRAGRIKEALEIVKNMPFK------PTGSIWGSLLNSCRLHGNVPLAEAVAKRLFEL 477
Query: 182 EPNNTGAYVILIN-----------EALKDLLER--------------------------- 203
EPNN G YV+L N + +++ +E+
Sbjct: 478 EPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSN 537
Query: 204 ------------------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
ME+ GYVPDT VL DV EE + + H ERLA +F +I+T
Sbjct: 538 EFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINT 597
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
G IR+ KNL K +SK+ R +++RD RF HF
Sbjct: 598 ASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRF-HHF 641
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 91/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLL- 201
VW LLS R+H ++E E ++ +EP N+GAYV+L N ++DL+
Sbjct: 340 VWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLME 399
Query: 202 -------------------------------------------ERMEQEGYVPDTKEVLL 218
ER++ EGYV +TKEVLL
Sbjct: 400 TMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLL 459
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++EE K+ L H E+LAL +G + T GT IR++KNL R K++SK+ RE+
Sbjct: 460 DLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREI 519
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 520 IVRDCNRF-HHF 530
>gi|356521500|ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 588
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 31/166 (18%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI-------------------- 193
VW L R H + +L + ++I+ ++P+ A I +
Sbjct: 414 VWEKLKHYARAHGDFDLEDYTEELIVSLDPSKAVANKIPMPPPKKYTAINMLDGRNRIIE 473
Query: 194 ---------NEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIS 244
+E LK L M++ GYVPDT+ VL D+++E K+ L YH ERLA+ +G+IS
Sbjct: 474 YKNPTLYKDDEKLK-ALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 532
Query: 245 TPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
TP T +R+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 533 TPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 577
>gi|190612837|gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelmannii]
Length = 152
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L++L E++ Q GYVPDT+ VL D+ EE+KK L +H E+LA+ FG+ISTP G TIRVIKN
Sbjct: 56 LQNLSEQIVQAGYVPDTRFVLHDLTEEEKKFSLCHHSEKLAIAFGLISTPQGATIRVIKN 115
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SK+V RE+IVRD +RF HF
Sbjct: 116 LRICGDCHSATKFISKLVDREIIVRDAKRF-HHF 148
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 77/262 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHAGS 150
+S SI C +G ++G +FF M M + +R S+
Sbjct: 534 VSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFME 593
Query: 151 T------ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
T +W LL CR + ++ELAEKVA+ + +EP NTG YV+L N E
Sbjct: 594 TLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEE 653
Query: 197 LKDLLE------------------------------------------------RMEQEG 208
+K L E +M++EG
Sbjct: 654 VKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEG 713
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+ P TK L++ +E QK+ L H E+LA+ FG+++ P TIRV KNL K
Sbjct: 714 HFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAK 773
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK RE+++RD+ RF HF
Sbjct: 774 FMSKETRREIVLRDSNRF-HHF 794
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 106/253 (41%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTE 152
C +G D+GL +F M L+A+ + I M +
Sbjct: 624 ACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSA 683
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W+ LLSACRVH NVELAE + ++ ++ N G+Y ++ N
Sbjct: 684 VIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLM 743
Query: 195 ---------------------------------EALKDLLERM----EQEGYVPDTKEVL 217
+ LLER+ + GYVP+T L
Sbjct: 744 KKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFAL 803
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++E+K N+L H E+LAL +G+++T G IR+ KNL +SKIV E
Sbjct: 804 HDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHE 863
Query: 278 MIVRDNRRFCRHF 290
+IVRD+ RF HF
Sbjct: 864 IIVRDSSRF-HHF 875
>gi|302781642|ref|XP_002972595.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
gi|300160062|gb|EFJ26681.1| hypothetical protein SELMODRAFT_97496 [Selaginella moellendorffii]
Length = 606
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 55/187 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMIL----------------------------------- 179
W++LL ACR+HRNVE+ + A+ +
Sbjct: 406 WMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRD 465
Query: 180 ----------MIEPNNTGAYVILINEALKDLLE----------RMEQEGYVPDTKEVLLD 219
IE N + I+ + DL++ M++ GYVPDTK+VL D
Sbjct: 466 RGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYVPDTKQVLHD 525
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
EEE+K++ILY+H E+LA+ G+I TP TTI ++KN+ KV+SK+ R+++
Sbjct: 526 AEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKVISKVTERKIV 585
Query: 280 VRDNRRF 286
+RD F
Sbjct: 586 IRDINLF 592
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 124/317 (39%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S R+VFE + RD IS ++ G Q+G +E L + +M++A K F
Sbjct: 373 SAREVFEGITFRD-------VISWTTMVVGEAQHGRAEEALALYDRMVLAGAKPNEVTFV 425
Query: 144 RIM----HAG-------------------------------------------------- 149
++ HAG
Sbjct: 426 GLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAEELMTTMPY 485
Query: 150 -STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
E W LLSAC +++ E+ +++D +L + P ++ Y++L N
Sbjct: 486 EPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNGKWDSVAKV 545
Query: 195 -------------------------------------EALKDLLERM----EQEGYVPDT 213
E + LE M + GYVPDT
Sbjct: 546 RKCMIGLEIRKEPGYSWIEAGREFRLFHAGEVPLDVREEIMVFLEEMVLEMRKRGYVPDT 605
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V+ D+EE +K++ L+ H ERLA+ FG+I +P G+ IRV+KNL K++S+I
Sbjct: 606 SSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVMKLISEI 665
Query: 274 VHREMIVRDNRRFCRHF 290
HR+++VRD+ RF HF
Sbjct: 666 THRKIVVRDSSRF-HHF 681
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 129/324 (39%), Gaps = 121/324 (37%)
Query: 80 SRSGSVR---KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++SGS+ +VF+ M R+ +S NSI GC Q+G ++ + F QML A IK
Sbjct: 188 AKSGSMEDACQVFDKMPQRN-------EVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 137 ARHAPFSRIMHAGS---------------TEN---------------------------- 153
F ++ A S T+N
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL ACR+H N ELA+++A+ +L +E G YV+L N
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360
Query: 195 --------EALKD----------------------------------------LLERMEQ 206
+ +KD L +M+
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GYVP+ VL DVE+++K+ L +H E+LA+ FGII+T GTTIRV KNL
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K +S R+++VRD RF HF
Sbjct: 481 IKFISLNFTRKIVVRDANRF-HHF 503
>gi|296083546|emb|CBI23541.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
K FE M +++ + + N++ AG +N + GLK F +M+ + + + S ++
Sbjct: 193 KYFEEMPMKNLVTW-------NAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVL 245
Query: 147 HAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQ 206
S LSA ++ + V ++ P + + I+E L +L +M
Sbjct: 246 LGCSN-------LSALKLGKQVH-------QLICKSPVSIHPELAFIHEKLNELERKMRL 291
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GYVPD + L DV EEQKK IL H E+LA+ +G+I P GT IRV KNL
Sbjct: 292 AGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSA 351
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K +S I R +IVRD RF HF
Sbjct: 352 TKYISAIEGRVIIVRDTTRF-HHF 374
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 102/231 (44%), Gaps = 73/231 (31%)
Query: 116 QNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVA 175
++G FDE K GQM PF E VW ++L++CR+H+N LA K A
Sbjct: 591 RSGRFDEAEKLMGQM----------PFE------PDEIVWTSVLNSCRIHKNYALARKAA 634
Query: 176 DMIL-MIEPNNTGAYVILIN---------------EALKD-------------------- 199
+ M + YV + N +A++D
Sbjct: 635 GQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHV 694
Query: 200 --------------------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L E+ME+EGY PD +V++E K + L YH ERLA+
Sbjct: 695 FSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIA 754
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
F +I+TP+G+ I V+KNL + KV+SKIV RE+ VRD+ RF HF
Sbjct: 755 FALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRF-HHF 804
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 119/317 (37%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S R+VFE + VRD IS +I G Q+G +E + +ML+A +K F
Sbjct: 289 SAREVFEGITVRD-------VISWTTILVGEAQHGRAEEVFALYNRMLLAGMKPNEVTFV 341
Query: 144 RIM----HAG-------------------------------------------------- 149
++ HAG
Sbjct: 342 GLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSEAEKLITTMPY 401
Query: 150 -STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
E W LLSAC+ H + ++ +VAD +L + P + Y++L N
Sbjct: 402 EPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKV 461
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E + LE + E GYVPDT
Sbjct: 462 RKIMAEMEIRKVPGYSWVEAGRESRIFHAGEVPLDVGEEITCFLEELVSEMRKRGYVPDT 521
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V+ D+EE +K+ L+ H ERLA+ FGI+ +P G+ IRV+KNL K +S I
Sbjct: 522 SSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISAI 581
Query: 274 VHREMIVRDNRRFCRHF 290
R++IVRD RF HF
Sbjct: 582 AQRKIIVRDASRF-HHF 597
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 135/343 (39%), Gaps = 122/343 (35%)
Query: 62 GGRQVDIHFDGGVDGLRPSRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNG 118
G +D++ + + ++ GS+ R VF M+ R+ + + ++ GC Q+G
Sbjct: 428 AGYSLDVYLQSALVSMY-AKCGSMDDARLVFNQMSERNVVAW-------TAMITGCAQHG 479
Query: 119 PFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE---------------------- 152
E L++F QM IK F+ ++ H G E
Sbjct: 480 RCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 539
Query: 153 -----------------------------NVWLTLLSACRVHRNV--------------- 168
+VW LLSACR+H +V
Sbjct: 540 SCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDP 599
Query: 169 -------------------ELAEKVADMI----LMIEPNNTGAYV--------------- 190
E AEKV ++ ++ EP + V
Sbjct: 600 DDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 659
Query: 191 --ILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
I L L E+++++GYVPDT+ VL DV+EEQK L H ERLA+ +G++ TP G
Sbjct: 660 EAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPG 719
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
T IR++KNL +K +SK+V RE+I RD RF HF+
Sbjct: 720 TPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRF-HHFV 761
>gi|125589603|gb|EAZ29953.1| hypothetical protein OsJ_14007 [Oryza sativa Japonica Group]
Length = 504
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 106/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E +++ ++ PF T+ VW +LL+ R++ +++L ++
Sbjct: 314 GKSGHLNEAVEYIEKL----------PFE------PTDTVWESLLNLARMNGDIDLEDRA 357
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P + L+ L +E+ + ++ YVPDT
Sbjct: 358 EELLVSLDPTKVNPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 417
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 418 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 477
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 478 VGRELIVRDNKRF-HHF 493
>gi|296089822|emb|CBI39641.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM---LMAKIKARHAP--- 141
A++ F E C ++ + +T + C G EGL+ F M + + K H
Sbjct: 18 ALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMV 77
Query: 142 --------------FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ M + +W LL ACR H N+ LAE V + M +
Sbjct: 78 DLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAE-VEKRVHMFTGGVST 136
Query: 188 AYVIL--INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
+ L I + L+ L + + GY PD+ VL DV+EE+K L +H ERLA+ FG++
Sbjct: 137 KHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKV 196
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
P+G IRV+KNL K+++KI RE+I+RD RF HF
Sbjct: 197 PEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRF-HHF 240
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 107/252 (42%), Gaps = 75/252 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE---------------N 153
C +G EG FF M KI + ++ ++ AG +
Sbjct: 433 ACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
VW LLSAC+ HR+VEL E A + I+P+NTG YV L N + + ++ RM+
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
++G +V + L
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ +E+ + L H ER+A+ +G+ISTP GT +R+ KNL + K++SK+V RE+
Sbjct: 613 DLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREI 672
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 673 VVRDTNRF-HHF 683
>gi|302780547|ref|XP_002972048.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
gi|300160347|gb|EFJ26965.1| hypothetical protein SELMODRAFT_96927 [Selaginella moellendorffii]
Length = 606
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 55/187 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMIL----------------------------------- 179
W++LL ACR+HRNVE+ + A+ +
Sbjct: 406 WMSLLQACRIHRNVEIGARAAEHVFRLAPHRAGPYSLLSNIYSDAGKWDMAAKVQKLMRD 465
Query: 180 ----------MIEPNNTGAYVILINEALKDLLE----------RMEQEGYVPDTKEVLLD 219
IE N + I+ + DL++ M++ GYVPDTK+VL D
Sbjct: 466 RGIKKPGGRSWIEINGKTSEFIVGDSWHPDLVQICQEIQRVSKVMKEHGYVPDTKQVLHD 525
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
EEE+K++ILY+H E+LA+ G+I TP TTI ++KN+ KV+SK+ R+++
Sbjct: 526 AEEEEKEDILYFHSEKLAIGLGLIKTPPKTTISIVKNIRVCPDCHTAAKVISKVTERKIV 585
Query: 280 VRDNRRF 286
+RD F
Sbjct: 586 IRDINLF 592
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAG 149
+ + C G +EGL+ F ++ LM + + I M
Sbjct: 339 VLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIK 398
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ VW +LLSAC+VH N+E+ E A+ I + +N G Y++L N
Sbjct: 399 PNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIR 458
Query: 195 ------------------------------------EALKDLLERMEQ----EGYVPDTK 214
E + D++++ME EGY PD
Sbjct: 459 TEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMS 518
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+VLLDV+E++K+ L +H ++LA+ F +I T +G+ IR+ +N+ K +S I
Sbjct: 519 QVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKFISVIY 578
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD RF HF
Sbjct: 579 EREITVRDRNRF-HHF 593
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 127/330 (38%), Gaps = 122/330 (36%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
S+ G V R VF+ ++ RD ++ N++ AG GQ+G E + F +ML ++
Sbjct: 564 SKCGEVTEARTVFDKISNRD-------TVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVP 616
Query: 137 ARHAPFS-------------------RIMH---------------------AGSTE---- 152
F+ RIM AG +
Sbjct: 617 PNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEE 676
Query: 153 -----------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
+VW LL AC+ H NV+LAE A IL +EP+N YV L N
Sbjct: 677 FIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGR 736
Query: 195 --------------------------------------------EALKDLLERMEQE--- 207
+++ LE + +E
Sbjct: 737 WDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKE 796
Query: 208 -GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GY PD + VL DV+E QK+ L +H E+LA+ +G++ TP GT IR++KNL
Sbjct: 797 AGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTA 856
Query: 267 NKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
K +SKI RE++ RD RF H+ C
Sbjct: 857 TKFISKIRKREIVARDANRF--HYFKNGTC 884
>gi|358357208|gb|AEU08444.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L E M+++GY+PDT+ VL DVEEEQK++ L YH E+LA+ FG+I+TP GT I
Sbjct: 52 IHAELRRLSECMKEDGYLPDTRCVLHDVEEEQKESSLCYHSEKLAIAFGLITTPPGTPIH 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +SKIV R ++VRD RF HF
Sbjct: 112 VIKNLRVCGDCHTTTKFISKIVGRAVVVRDANRF-HHF 148
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 112/258 (43%), Gaps = 76/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIM----HAGSTE----------- 152
S+ C +G +EG F M ++ +H ++ ++ AG E
Sbjct: 555 SLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPF 614
Query: 153 ----NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---EALK------- 198
+V LLS CR H+N + ++AD ++ ++ N+G YV+L N EA K
Sbjct: 615 QPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYI 674
Query: 199 -----------------------------------------DLLERM----EQEGYVPDT 213
LLE + E EGY+PDT
Sbjct: 675 RGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDT 734
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL DV E K +L+ H ERLA+ FG++STP G+ I++ KNL + K +SKI
Sbjct: 735 SCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKI 794
Query: 274 VHREMIVRDNRRFCRHFL 291
V RE+IVRD RF HF+
Sbjct: 795 VQREIIVRDANRF-HHFV 811
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM-----AKIK---------------ARHAPFSRIMHA 148
S+ + C G +EGL ++ M+ AKI A F + M
Sbjct: 642 SLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPV 701
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNN-------------TG-------- 187
T++VW +LL+AC+ H N+EL K + +L ++P++ TG
Sbjct: 702 SPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKI 761
Query: 188 ---------------AYVILINE-------------------ALKDLLERMEQEGYVPDT 213
++V L N+ L++L + +++ GY+PD
Sbjct: 762 RRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDI 821
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D +EEQK++ L+ H ERLAL +G+IS+P+G+T+++ KNL K S I
Sbjct: 822 SYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGI 881
Query: 274 VHREMIVRDNRRF 286
+ R++++RD RF
Sbjct: 882 LGRKIVLRDPYRF 894
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 111/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS--RI--- 145
I+ ++ C G ++G +F ML M + R FS RI
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M + VW LL+ CR+H N++L + A+ + + P N G YV+L N
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNE 646
Query: 195 -----EALKDLLER---------------------------------MEQEG-------Y 209
+ ++D R +EQ G Y
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
+PDTK VL D+E EQK++ L H E+LA+ FGI+ P G T+RV KN+ + K
Sbjct: 707 IPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKF 766
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD +RF HF
Sbjct: 767 MSKVARREIIVRDRKRF-HHF 786
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L++L +M+ GYVPD VL DVE+++K+NIL H ERLA+ FGIISTP TT++
Sbjct: 709 IYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQ 768
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +SKI RE+IVRD+ RF HF
Sbjct: 769 IFKNLRVCGDCHNATKFISKITEREIIVRDSNRF-HHF 805
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 105 ISRNSITAGCGQNGPFDEG----------------LKFFGQMLMAKIKARHAP----FSR 144
I+ S+ + C +G DEG LK +G M+ +A H F +
Sbjct: 546 ITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVK 605
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
M +VW LL ACR+H NVEL V+D +L +E N G YV+L N
Sbjct: 606 NMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSN 655
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 115/290 (39%), Gaps = 90/290 (31%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIK 136
+G + F A+ F + + + N +T + C G +EG K F M
Sbjct: 551 TGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMY----- 605
Query: 137 ARHAPFSRIMH----------AGSTEN---------------VWLTLLSACRVHRNVELA 171
H R+ H +GS VW T L ACRVH N+EL
Sbjct: 606 TEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELG 665
Query: 172 EKVADMILMIEPNNTGAYVI-------------------------LINEA---------- 196
+ A MI+ EP++ AY++ LI EA
Sbjct: 666 KHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENK 725
Query: 197 --------------------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERL 236
L++L ++++ GYVP+ VL DVEEEQK+ +L+ H E++
Sbjct: 726 VHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKI 785
Query: 237 ALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
A+ FG+IST IRV KNL K +S RE+IVRD RF
Sbjct: 786 AVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRF 835
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMIL---------------------------------- 179
VW L++ACR+H+N +L E A +L
Sbjct: 570 VWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMK 629
Query: 180 -----------MIEPNNTGAYVIL----------INEALKDLLERMEQEGYVPDTKEVLL 218
+IE N T ++ INE L ++ ++ + GYVPDT VLL
Sbjct: 630 TVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLL 689
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+++EE+K+ L YH E+LA+ FG+IST T IR++KNL K++SKI R +
Sbjct: 690 NIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVI 749
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 750 IVRDRNRF-HHF 760
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L ++ R+E+ G+VPDT EVL D++EE K+ +L +H E+LA+ FG+IST GTTIR
Sbjct: 629 IYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIR 688
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SKI +RE+I RD RF HF
Sbjct: 689 IMKNLRVCGNCHSATKLISKIFNREIIARDRNRF-HHF 725
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
I CG G +EGLK+F +M + K++ + AG ++
Sbjct: 659 ILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEE 718
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTG---------------------- 187
+W +LL +CR +E+ EKVA +L +EP+
Sbjct: 719 ADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVR 778
Query: 188 ----------------------AYVILINEALKD-----------LLERMEQEGYVPDTK 214
Y ++ ++L+ L ER+ + GY P+T
Sbjct: 779 QMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTS 838
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL +V EE+K +IL H E+LA+ FG++ T GTT+R+ KNL + K++SK V
Sbjct: 839 SVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAV 898
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRDN+RF HF
Sbjct: 899 EREIVVRDNKRF-HHF 913
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSR 144
+S + + C G DEGL ++ M M + R F
Sbjct: 668 VSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFIT 727
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
M + VW +LL++CR++RN++L K A +L ++P++ AYV+ N E
Sbjct: 728 EMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWED 787
Query: 197 LKDLL---------------------------------ERMEQ--------------EGY 209
++D+ +MEQ GY
Sbjct: 788 VEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGY 847
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPDT L D +EEQK++ ++ H ER+AL FG+I+ P+G+T+R+ KNL K
Sbjct: 848 VPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKF 907
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VS ++ R++++RD RF HF
Sbjct: 908 VSGVLGRKIVLRDPYRF-HHF 927
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 108/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHA 148
S+ + C +G DEGL F +M M +K R + M
Sbjct: 340 SVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPI 399
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------- 192
+ + +W +LLSAC+VH N++L E A+ + + +N Y++L
Sbjct: 400 KANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKI 459
Query: 193 ----INEAL-------------------------------KDLLERMEQ----EGYVPDT 213
IN L ++ +ME EGY+PDT
Sbjct: 460 RTKMINRGLIQTPGYSLVEVKSKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDT 519
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+V+LDV+EE+K L H ++LA+ F +I T G+ IR+I+NL K+VS I
Sbjct: 520 SQVMLDVDEEEKGERLKGHSQKLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMI 579
Query: 274 VHREMIVRDNRRFCRHF 290
RE+ VRD RF HF
Sbjct: 580 YEREITVRDRNRF-HHF 595
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 79/279 (28%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQML--------------M 132
++FE+M D L I+ ++ + C G +EG ++F M M
Sbjct: 514 ELFELMLKEDILPD---RITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARM 570
Query: 133 AKIKARHAPFSR------IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNT 186
+ R FS M +W LL+ CR+H N++L + A+ + + P +
Sbjct: 571 IDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHD 630
Query: 187 GAY--------------------------------------------VILIN-------E 195
G Y V L++ +
Sbjct: 631 GTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQ 690
Query: 196 ALKDLLE----RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
A+ + LE +M + GY+PDTK VL D+E EQK+ +L H E+LA+ FG++ P G T+
Sbjct: 691 AVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATV 750
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RV KNL + K +SK+V RE++VRD +RF HF
Sbjct: 751 RVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRF-HHF 788
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 106/253 (41%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTE 152
C +G D+GL +F M L+A+ + I M +
Sbjct: 624 ACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSA 683
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W+ LLSACRVH NVELAE + ++ ++ N G+Y ++ N
Sbjct: 684 AIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLM 743
Query: 195 ---------------------------------EALKDLLERM----EQEGYVPDTKEVL 217
+ LLER+ + GYVP+T L
Sbjct: 744 KKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFAL 803
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++E+K N+L H E+LAL +G+++T G IR+ KNL +SKIV E
Sbjct: 804 HDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHE 863
Query: 278 MIVRDNRRFCRHF 290
+IVRD+ RF HF
Sbjct: 864 IIVRDSSRF-HHF 875
>gi|297733701|emb|CBI14948.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 29/223 (13%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFF--------GQMLMAKIKA 137
R+VF+ M+ R+ + NS+ AG ++G ++E +K + L+ +
Sbjct: 179 RRVFDEMSERNVRTW-------NSMFAGYTKSGNWEEVVKLYVEEKGLKGNPTLITSLVD 231
Query: 138 RHAPFSR----IMHAGSTENV------WLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
A R + H N+ +++LS+C V +E + V I+
Sbjct: 232 IQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVH---FFIKKKRMK 288
Query: 188 AYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD 247
I A++D++++++ GYVP+T E LD EE+ K++ + +H E+LA+ FG+I +P
Sbjct: 289 LTSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPP 348
Query: 248 GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
GTTIR+ KNL + K+VSK+ +RE++VRD RF HF
Sbjct: 349 GTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRF-HHF 390
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L M GY+PDTK +L DVE+E+K+++L+YH ERLA+ FG+ISTP GT +R
Sbjct: 674 IYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLR 733
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
VIKNL K +SK+ RE++VRD RF
Sbjct: 734 VIKNLRVCSDCHTATKYISKLRGREILVRDTHRF 767
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 63/163 (38%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF----S 143
VFE MA RD L + NS+ Q+G +DE L+ F QM + +KA F S
Sbjct: 465 VFEKMAKRDILVW-------NSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLS 517
Query: 144 RIMHAGSTEN-------------------------------------------------- 153
+ H+GS +
Sbjct: 518 ALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPD 577
Query: 154 --VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W+TLL ACR H + A+ A+ +L +P+++GAYV+L N
Sbjct: 578 GILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSN 620
>gi|125547430|gb|EAY93252.1| hypothetical protein OsI_15058 [Oryza sativa Indica Group]
Length = 407
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E +++ ++ PF T VW +LL+ R++ +++L ++
Sbjct: 217 GKSGHLNEAVEYIEKL----------PFE------PTATVWESLLNLARMNGDIDLEDRA 260
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P + L+ L +E+ + ++ YVPDT
Sbjct: 261 EELLVSLDPTKVNPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 320
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 321 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 380
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 381 VGRELIVRDNKRF-HHF 396
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 105/261 (40%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI----- 145
I+ S+ C G +EG +FF M M + R
Sbjct: 354 ITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIE 413
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M E +W LL ACR+HR+++LAE+VA +L ++ G YV+L N
Sbjct: 414 GMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWED 473
Query: 195 -EALKDLLER--------------------------------------------MEQEGY 209
+DL+ + +E GY
Sbjct: 474 MAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGY 533
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
PDT +VL DV+EE K+ +LY H E+LA+ FG++ P G IR+ KNL K
Sbjct: 534 HPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKF 593
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VS I + +IVRD +RF HF
Sbjct: 594 VSLIEQKTIIVRDAKRF-HHF 613
>gi|302781368|ref|XP_002972458.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
gi|300159925|gb|EFJ26544.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
Length = 381
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 55/189 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLL 201
WLT+LSACR+ ++V AE A+ IEP AY+++ N E ++ L+
Sbjct: 179 TAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVEKVRRLM 238
Query: 202 ER--------------------------------------------MEQEGYVPDTKEVL 217
ER +++ GYVPDT VL
Sbjct: 239 ERRGVKKEPGLSCIEVKNRLHEFGAADKSHPQKDLIYEELRKLTLEIKEAGYVPDTSLVL 298
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
+V+EE K+ L++H ERLA+V+G+I+TP GT++ V+ NL K +S I +R+
Sbjct: 299 HNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCHTAFKYISTISNRQ 358
Query: 278 MIVRDNRRF 286
++VRD RF
Sbjct: 359 IVVRDANRF 367
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMIL---------------------------------- 179
VW L++ACR+H+N +L E A +L
Sbjct: 530 VWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMK 589
Query: 180 -----------MIEPNNTGAYVIL----------INEALKDLLERMEQEGYVPDTKEVLL 218
+IE N T ++ INE L ++ ++ + GYVPDT VLL
Sbjct: 590 TVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLL 649
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+++EE+K+ L YH E+LA+ FG+IST T IR++KNL K++SKI R +
Sbjct: 650 NIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVI 709
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 710 IVRDRNRF-HHF 720
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I + GC G+ G DE +F R M +W
Sbjct: 451 DYGIKPRAEHYGCVVDLLGRAGLIDEAYQFI----------------RTMPIEPNAVIWR 494
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALKD-- 199
LLS+C VH+NVE+ E+ I+ + P+++G Y++L I + +KD
Sbjct: 495 ALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRG 554
Query: 200 --------------------------------------LLERMEQEGYVPDTKEVLLDVE 221
+++R++ GY+P+T +V L+V+
Sbjct: 555 IEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVD 614
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E +K+ + +H E+LA+ FG++ G TIR+ KNL K++SK+ +RE++VR
Sbjct: 615 EHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVR 674
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 675 DRNRF-HHF 682
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 108/261 (41%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------R 144
I+ S+ + C G E +FFG M M I R +
Sbjct: 593 ITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVK 652
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M ++ VW LL A R+H+N+EL A+M+L +EP +G +++L N
Sbjct: 653 EMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDN 712
Query: 195 -----EALKDLLERME----------------------------------------QEGY 209
++K+ L + E GY
Sbjct: 713 VAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGY 772
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP + L DVE+ +K+ +L++H E+LA+ FG+I+TP G IRV KNL K
Sbjct: 773 VPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKF 832
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD RF HF
Sbjct: 833 ISKVASREIIVRDINRF-HHF 852
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 110/258 (42%), Gaps = 78/258 (30%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ A C G D+G ++ M L+ + + I M
Sbjct: 403 SVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKV 462
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---EA--LKDLLER 203
+W LLSACR+H+NVELAE A + ++ N G YV+L N EA KD +ER
Sbjct: 463 KPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKD-VER 521
Query: 204 M---------------------------------------------------EQEGYVPD 212
M ++ GYVP+
Sbjct: 522 MRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPN 581
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL D++EE+K + L+ H E+LA+ F ++++ G+ I VIKNL K+++K
Sbjct: 582 TGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITK 641
Query: 273 IVHREMIVRDNRRFCRHF 290
I RE+IVRD +RF HF
Sbjct: 642 IAQREIIVRDLQRF-HHF 658
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 111/261 (42%), Gaps = 78/261 (29%)
Query: 90 EIMAVRDFLEYCDYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSR 144
E M + +EY +Y IS C G+ G FD+ + G+M PF
Sbjct: 561 ECMKYFELMEY-EYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEM----------PFE- 608
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
+W ++L +CR H N +LA A+ + + + YVIL N
Sbjct: 609 -----DDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWED 663
Query: 195 -----------------------------------------EALKDLLER----MEQEGY 209
+KD LER M+++GY
Sbjct: 664 AAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGY 723
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
PDT L V+++ K L YH ERLA+ F +I+TP GT IRV+KNL + K+
Sbjct: 724 KPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKM 783
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV+R++IVRD+ RF HF
Sbjct: 784 MSKIVNRDIIVRDSSRF-HHF 803
>gi|125542459|gb|EAY88598.1| hypothetical protein OsI_10074 [Oryza sativa Indica Group]
Length = 296
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 195 EALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
E +++L E + GYVPDT+ VL D++E+ K L YH ERLA+ FG++STP GT +RVI
Sbjct: 191 EKVRELHEEIRAAGYVPDTRYVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVI 250
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL + K+++K+ RE++VRDN+RF HF
Sbjct: 251 KNLRICGDCHNAVKLIAKVTGREIVVRDNKRF-HHF 285
>gi|115455577|ref|NP_001051389.1| Os03g0767700 [Oryza sativa Japonica Group]
gi|31415922|gb|AAP50943.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539080|gb|AAR87337.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711268|gb|ABF99063.1| expressed protein [Oryza sativa Japonica Group]
gi|113549860|dbj|BAF13303.1| Os03g0767700 [Oryza sativa Japonica Group]
gi|125588042|gb|EAZ28706.1| hypothetical protein OsJ_12720 [Oryza sativa Japonica Group]
gi|215707074|dbj|BAG93534.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 296
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 195 EALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
E +++L E + GYVPDT+ VL D++E+ K L YH ERLA+ FG++STP GT +RVI
Sbjct: 191 EKVRELHEEIRAAGYVPDTRYVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVI 250
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL + K+++K+ RE++VRDN+RF HF
Sbjct: 251 KNLRICGDCHNAVKLIAKVTGREIVVRDNKRF-HHF 285
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 82/262 (31%)
Query: 94 VRDFLEYCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
V D Y +Y + R I GC G+ G DE K M M P
Sbjct: 344 VSDGHNYFNYIVQRYGIEPKMEHYGCMVDLFGRAGLLDEAKKVIDDMPME-------PDI 396
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
++ A L AC++HR+++L E + ++ ++P N+G YV+L N
Sbjct: 397 GVLGA---------LFGACKIHRDLDLGEAIGWRVIELDPQNSGRYVLLANLLASAGQWV 447
Query: 195 ----------------EALKDLLE------------------------------RMEQEG 208
EA + ++E ++ EG
Sbjct: 448 DVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCGSLCHAQEKEIFAAVKDMMRKIRLEG 507
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y+PDT +VL D+ EE+K+ L YH E+LA+ FG++ T G T+R+ KNL R K
Sbjct: 508 YMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRITKNLRVCRDCHEATK 567
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+S++ RE++VRD RF HF
Sbjct: 568 FISRVFEREIVVRDRNRF-HHF 588
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 106/253 (41%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTE 152
C +G D+GL +F M L+A+ + I M +
Sbjct: 67 ACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSA 126
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W+ LLSACRVH NVELAE + ++ ++ N G+Y ++ N
Sbjct: 127 VIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLM 186
Query: 195 ---------------------------------EALKDLLERM----EQEGYVPDTKEVL 217
+ LLER+ + GYVP+T L
Sbjct: 187 KKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFAL 246
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++E+K N+L H E+LAL +G+++T G IR+ KNL +SKIV E
Sbjct: 247 HDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHE 306
Query: 278 MIVRDNRRFCRHF 290
+IVRD+ RF HF
Sbjct: 307 IIVRDSSRF-HHF 318
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 109/262 (41%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI---- 145
AI+ + A C G +EG+ +F M M + R +
Sbjct: 440 AITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLI 499
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMI------------------------- 178
M V + LLSACR+H N+ +AE+ A +
Sbjct: 500 QNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWE 559
Query: 179 -------LMIEPN---NTGAYVIL--------------------INEALKDLLERMEQEG 208
LM+E N G I I E L D++ R++ G
Sbjct: 560 AAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAG 619
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD EVL D++E++K+N L H E+LA+ FG++ST GT IRV+KNL K
Sbjct: 620 YVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMK 679
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+S++ +RE+IVRD RF HF
Sbjct: 680 FISEVYNREIIVRDRNRF-HHF 700
>gi|302804238|ref|XP_002983871.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
gi|300148223|gb|EFJ14883.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
Length = 481
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 58/225 (25%)
Query: 123 GLKFFGQMLMAKIKARHAP----FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMI 178
G + FG ++ A +A H + M E+VW L ++ ++H + + ++ A+++
Sbjct: 246 GKEHFGCLVDAVGRAGHLKDAEDLIKAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIM 305
Query: 179 LMIEPN--------------------------------NTGAYVILINEALKDLLER--- 203
+ + P G +I IN + + R
Sbjct: 306 MKMNPQLDPLGTGANRTAARWEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRS 365
Query: 204 ------------------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
++E Y+PDT+ VL DV E+QK +LYYH ERLA+ +G I+T
Sbjct: 366 HIHTKEIYAEVDRITEICKKEENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIAT 425
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
P G+ +RVIKNL +K+ +KI+ RE+IVRDNRRF HF
Sbjct: 426 PPGSALRVIKNLRVCGDCHTISKMWAKIMQREIIVRDNRRF-HHF 469
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 92/205 (44%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EA 196
F + M T VW L ACR+H N +L E A +L ++P++ G+YV++ N
Sbjct: 573 FVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGR 632
Query: 197 LKDLLE-RMEQEG----------------------------------------------- 208
KD+ E RM +G
Sbjct: 633 WKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEK 692
Query: 209 ---YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YVP TK VL +V +E+K +LY H ERLA+ +G++ST +GT IR+ KNL
Sbjct: 693 EGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHT 752
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+VSK RE+IVRD RF HF
Sbjct: 753 FCKLVSKFFERELIVRDASRF-HHF 776
>gi|302754748|ref|XP_002960798.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
gi|300171737|gb|EFJ38337.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
Length = 481
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 58/225 (25%)
Query: 123 GLKFFGQMLMAKIKARHAP----FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMI 178
G + FG ++ A +A H + M E+VW L ++ ++H + + ++ A+++
Sbjct: 246 GKEHFGCLVDAVGRAGHLKDAEDLIKAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIM 305
Query: 179 LMIEPN--------------------------------NTGAYVILINEALKDLLER--- 203
+ + P G +I IN + + R
Sbjct: 306 MKMNPQLDPLGTGANRTAARWEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRS 365
Query: 204 ------------------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
++E Y+PDT+ VL DV E+QK +LYYH ERLA+ +G I+T
Sbjct: 366 HIHTKEIYAEVDRITEICKKEENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIAT 425
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
P G+ +RVIKNL +K+ +KI+ RE+IVRDNRRF HF
Sbjct: 426 PPGSALRVIKNLRVCGDCHTISKMWAKIMQREIIVRDNRRF-HHF 469
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIM----HAGSTEN----------- 153
+ + C G +EG FF M+ KI ++ ++ H+G +
Sbjct: 383 VLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL 442
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDL- 200
VW LL++C++H NVEL E + ++ +EP++ G YVIL N E + L
Sbjct: 443 PDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLR 502
Query: 201 ------------------------------------------LER----MEQEGYVPDTK 214
LER M++ GY P T
Sbjct: 503 KLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTG 562
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
V DVE+++K N++ H ERLA+ FG+ISTP GT + + KNL K +SKI
Sbjct: 563 SVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKIT 622
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD R+ HF
Sbjct: 623 EREITVRDVNRY-HHF 637
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
F R M + VW +LL AC + ++E E+ A + + +++ YV+L N
Sbjct: 705 FIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGR 764
Query: 195 ---------------------------------------------EALKDLLERME---- 205
+A+ LER++
Sbjct: 765 WEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIR 824
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+ GYVPDT+ VL DVEEEQK+ +L+YH E+LA+ FG+IS P +IRVIKNL +
Sbjct: 825 EAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHT 884
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K ++++ RE+ VRD RF HF
Sbjct: 885 ATKFIARVTQREIAVRDCNRF-HHF 908
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 56/194 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
E VW LL+A R+H+NVEL + D ++ IE N A+V+L N
Sbjct: 496 EGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNM 555
Query: 195 ----------------------------------EALKDLLERMEQ----EGYVPDTKEV 216
+ ++ +L M Q +GY+ +TKEV
Sbjct: 556 MKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEV 615
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+EEE K++ + H E+LA+ FG+++ P+ IR++KNL K++SK+ +R
Sbjct: 616 LFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNR 675
Query: 277 EMIVRDNRRFCRHF 290
E+++RD RF HF
Sbjct: 676 EIVMRDRNRF-HHF 688
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAK--IKARHAPFSRIMHAGSTE 152
C +G EGL+FF +M L+A+ + A+ F M
Sbjct: 633 ACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDA 692
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
++W LLSACR N +A++V+ IL + ++TG YV++ N
Sbjct: 693 SLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSM 752
Query: 195 ---------------------------------EALKDLLER----MEQEGYVPDTKEVL 217
+ +KDLLE M +EGYV D + L
Sbjct: 753 KTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFAL 812
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVEE+ K+++L H ERLA+ FG+++T G+ + V+KNL K ++KI+ RE
Sbjct: 813 HDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQRE 872
Query: 278 MIVRDNRRFCR 288
++VRD RF R
Sbjct: 873 ILVRDANRFHR 883
>gi|190612857|gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies]
Length = 152
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M+ GYVP T+ VL DVEEEQK+ IL +H E+LA+ FG+I+TP GTTIR
Sbjct: 52 IYAELERLSRQMKTAGYVPGTRFVLHDVEEEQKEQILCHHSEKLAIAFGLINTPPGTTIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K +SK+V RE++VRD R+ HF
Sbjct: 112 IIKNLRVCGDCHSATKFISKVVGREIVVRDAHRY-HHF 148
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 110/285 (38%), Gaps = 80/285 (28%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------ 130
SG + F A+ F E + + N +T + C G DE K F M
Sbjct: 522 SGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSI 581
Query: 131 --------LMAKIKARHA------PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVAD 176
M + R F M + VW T L +CRVHRN +L E A
Sbjct: 582 SPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK 641
Query: 177 MILMIEPNNTGAYVILIN--------EALKDLLERMEQE--------------------- 207
IL EP++ Y++L N + + L + M+Q+
Sbjct: 642 KILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFH 701
Query: 208 --------------------------GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFG 241
GY+P+T VL DVE+EQK+ L+ H E++A+ +
Sbjct: 702 VGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYA 761
Query: 242 IISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ISTP IRV KNL K +S + RE++VRD RF
Sbjct: 762 LISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRF 806
>gi|190612669|gb|ACE80712.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L+ LLE+M + GYVPDT+ VL D+EE++K L +H E+LA+ G+ISTP GTTIR
Sbjct: 52 IHEELQRLLEQMVEAGYVPDTRSVLHDLEEDEKVAHLSHHSEKLAIAXGLISTPPGTTIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL +K++SKIV R ++VRD RF HF
Sbjct: 112 IYKNLRVCLDXHTASKLMSKIVMRSLVVRDANRF-HHF 148
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 54/190 (28%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEP------------------------------ 183
W +LLS C++H + + A +VAD + +E
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRR 596
Query: 184 ---NNTGAYVILINEA--------------------LKDLLERMEQEGYVPDTKEVLLDV 220
N G I IN+ +K L ++M+ GYVPD + VL +V
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNV 656
Query: 221 EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIV 280
+EE+K+ +L YH E+LA+ +G+ISTP GT + ++KNL + K +S+IV R+++V
Sbjct: 657 KEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVV 716
Query: 281 RDNRRFCRHF 290
RD+ RF HF
Sbjct: 717 RDSTRF-HHF 725
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 56/194 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
E VW LL+A R+H+NVEL + D ++ IE N A+V+L N
Sbjct: 503 EGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNM 562
Query: 195 ----------------------------------EALKDLLERMEQ----EGYVPDTKEV 216
+ ++ +L M Q +GY+ +TKEV
Sbjct: 563 MKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEV 622
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+EEE K++ + H E+LA+ FG+++ P+ IR++KNL K++SK+ +R
Sbjct: 623 LFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNR 682
Query: 277 EMIVRDNRRFCRHF 290
E+++RD RF HF
Sbjct: 683 EIVMRDRNRF-HHF 695
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 84/182 (46%), Gaps = 44/182 (24%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA---------------------- 188
TE+VW LL+ CR+H + ELA VAD + + P ++ A
Sbjct: 278 TESVWGALLTGCRIHGDTELASFVADRVFELGPVSSAAGRYEEAARARKMLRDQGVKKET 337
Query: 189 ----------------------YVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKK 226
Y I + L++L E ME+ GY+ DT VL +V+ E+K
Sbjct: 338 GLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKN 397
Query: 227 NILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ YH ERLA+ FG+IS P IRV+KNL K +SK R +IVRDN RF
Sbjct: 398 QTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRF 457
Query: 287 CR 288
R
Sbjct: 458 HR 459
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTE------ 152
A S ++I C +G DEG +FF M + ++K +++ G+ +
Sbjct: 599 AASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFI 658
Query: 153 ---------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------E 195
++W++LL CR+HRNV+LAE+VA+ + +EP NTG YV+L N E
Sbjct: 659 DSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWE 718
Query: 196 ALKDL-----------------------------------------------LERMEQEG 208
A++ L +RM++EG
Sbjct: 719 AVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEG 778
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+ P K L+ + L H +LA+ FG+++ +G IRV KN K
Sbjct: 779 HDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAK 838
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+I+RD+ RF HF
Sbjct: 839 FISKMCSREIILRDSNRF-HHF 859
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 54/190 (28%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEP------------------------------ 183
W +LLS C++H + + A +VAD + +E
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRR 596
Query: 184 ---NNTGAYVILINEA--------------------LKDLLERMEQEGYVPDTKEVLLDV 220
N G I IN+ +K L ++M+ GYVPD + VL +V
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNV 656
Query: 221 EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIV 280
+EE+K+ +L YH E+LA+ +G+ISTP GT + ++KNL + K +S+IV R+++V
Sbjct: 657 KEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVV 716
Query: 281 RDNRRFCRHF 290
RD+ RF HF
Sbjct: 717 RDSTRF-HHF 725
>gi|218198170|gb|EEC80597.1| hypothetical protein OsI_22944 [Oryza sativa Indica Group]
Length = 563
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 108/228 (47%), Gaps = 47/228 (20%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S+ K+F I R E+C N + G+ G D+ +KF +M P S
Sbjct: 351 SMEKLFGIQPER---EHC------NCMVDLLGRAGKLDDAVKFIHEM-------NFQPDS 394
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA--------------- 188
I W TLL ACR+H+N +LA A IL +EP++ A
Sbjct: 395 VI---------WRTLLGACRMHKNADLAAYAAKEILRLEPDDQDAEKSWKMMRDRGVKKD 445
Query: 189 ----YVIL--INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
++ L I + L L R+ GY P T+ VL D+ EQK+++L YH E+LA+ FG
Sbjct: 446 PGRSWIELESIIQELSRLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGT 505
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++ +G IR++KNL K+VSK + +I+RD RF HF
Sbjct: 506 MNAMEGKPIRIMKNLRICGDCHAFAKLVSKSEGKVIIIRDPVRF-HHF 552
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI---- 145
+I+ ++ C +G +EG +F M+ M + AR
Sbjct: 336 SITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVI 395
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI------------ 191
M V LL ACR+H N+EL E+V + ++ ++P N+G YVI
Sbjct: 396 DEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWE 455
Query: 192 ---------------------------LINE----------------ALKDLLERMEQEG 208
++NE + ++LE + G
Sbjct: 456 QVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVAGGRDHPLAEAIYAKIYEMLESIRVVG 515
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+VPDT VL D+ EE+++N L+YH E+LA+ +G++ T G T+RV KNL + +K
Sbjct: 516 FVPDTDGVLHDLVEEERENPLFYHSEKLAIAYGLLKTKRGETLRVTKNLRVCKDCHQASK 575
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SK+ ++I+RD RF HF
Sbjct: 576 MISKVYDCDIIIRDRSRF-HHF 596
>gi|242056975|ref|XP_002457633.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
gi|241929608|gb|EES02753.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
Length = 396
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E L++ ++ PF VW ++L+ R++ +++L ++
Sbjct: 206 GKSGHLNEALEYIEKL----------PFE------PNAMVWESVLNLARMNGDIDLEDRA 249
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P+ + L+ L +ER + ++ YVPDT
Sbjct: 250 EELLVSLDPSKANPKKLSTLPPKRRMGINMLDGRNRLVEYRLPPKIERKVVNEQRYVPDT 309
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 310 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 369
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 370 VGRELIVRDNKRF-HHF 385
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 76/283 (26%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKA 137
G RK E+ + +++ ++ C G EGL++ GQM + K++
Sbjct: 683 GHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEH 742
Query: 138 RHAPFSRIMHAG---------------STENVWLTLLSACRVHRNVELAEKVADMILMIE 182
+ AG +W +LLS+CR +R++++ EKVA+ +L +
Sbjct: 743 YACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELG 802
Query: 183 PNNTGAYVILIN--------EALKDLLERMEQ---------------------------- 206
P+ YV++ N + ++ + +RM++
Sbjct: 803 PDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESL 862
Query: 207 -------------------EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD 247
GY PDT VL ++EE++K IL H E+LA+ FG+++T
Sbjct: 863 LQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAK 922
Query: 248 GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
GTT+RV KNL + K+VSKI RE+IVRDN+RF HF
Sbjct: 923 GTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRF-HHF 964
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 55/189 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLL 201
WLT+LSACR+ ++V AE A+ IEP AY+++ N + ++ L+
Sbjct: 246 TAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMSNLYAALERWDDVKKVRRLM 305
Query: 202 ER--------------------------------------------MEQEGYVPDTKEVL 217
ER +++ GYVPDT VL
Sbjct: 306 ERRGVKKEPGLSCIEVKNRLHEFGAANKSHPQKDLIYEELRKLTLEIKEAGYVPDTSLVL 365
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
+V+EE K+ L++H ERLA+V+G+I+TP GT++ V+ NL K +S I +RE
Sbjct: 366 HNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNLRMCSDCHTAFKYISTISNRE 425
Query: 278 MIVRDNRRF 286
++VRD RF
Sbjct: 426 IVVRDANRF 434
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 115/258 (44%), Gaps = 77/258 (29%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQM-----LMAKIK---------------ARHAPFSRIMH 147
N +TA C G +EG ++F QM L +I+ F M
Sbjct: 374 NLLTA-CSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMP 432
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
+ +W LL ACR+HRNVE+ ++VA++++ + P+++GAYV L N
Sbjct: 433 IKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 492
Query: 195 --------EALKD-----------LLERMEQEGYVPDTKE-------------------- 215
+ KD L E + ++ P KE
Sbjct: 493 MRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPI 552
Query: 216 ---VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VLL++EEE K+N L+YH E++A FG+IST G IR++KNL K++SK
Sbjct: 553 TTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISK 612
Query: 273 IVHREMIVRDNRRFCRHF 290
+ R++ VRD +RF HF
Sbjct: 613 VYKRKITVRDRKRF-HHF 629
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIM----HAGSTEN----------- 153
+ + C G +EG FF M+ KI ++ ++ H+G +
Sbjct: 285 VLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVL 344
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDL- 200
VW LL++C++H NVEL E + ++ +EP++ G YVIL N E + L
Sbjct: 345 PDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLR 404
Query: 201 ------------------------------------------LER----MEQEGYVPDTK 214
LER M++ GY P T
Sbjct: 405 KLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTG 464
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
V DVE+++K N++ H ERLA+ FG+ISTP GT + + KNL K +SKI
Sbjct: 465 SVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKIT 524
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD R+ HF
Sbjct: 525 EREITVRDVNRY-HHF 539
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 91/206 (44%), Gaps = 55/206 (26%)
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI------ 191
R F + M T +VW LL+ACRV+ EL + AD + ++P ++G +V+
Sbjct: 414 RAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFA 473
Query: 192 ---------LINEALKD----------------------------------------LLE 202
L+ + +KD L
Sbjct: 474 AAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRT 533
Query: 203 RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRG 262
M+ GY+PDT L D+EEE+K + YH E++AL FG+I+ P G IR+ KNL
Sbjct: 534 EMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGD 593
Query: 263 LRHGNKVVSKIVHREMIVRDNRRFCR 288
K +S IV RE+IVRDN RF R
Sbjct: 594 CHSAFKFISGIVGREIIVRDNNRFHR 619
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 55/189 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+VW LL AC+ H NV+LAE+ A IL +EP+ Y+ L N
Sbjct: 666 SVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVM 725
Query: 195 ---------------------------------EALKDLLERMEQE----GYVPDTKEVL 217
+A+ LE + +E GY PD + VL
Sbjct: 726 DDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVL 785
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++ QK+ L +H E+LA+ +G++ TP GT IR++KNL K +SKI RE
Sbjct: 786 HDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKRE 845
Query: 278 MIVRDNRRF 286
++ RD RF
Sbjct: 846 IVARDANRF 854
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 56/194 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
E VW LL+A R+H+NVEL + D ++ IE N A+V+L N
Sbjct: 503 EGVWGALLNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNM 562
Query: 195 ----------------------------------EALKDLLERMEQ----EGYVPDTKEV 216
+ ++ +L M Q +GY+ +TKEV
Sbjct: 563 MKAKGVKKVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEV 622
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+EEE K++ + H E+LA+ FG+++ P+ IR++KNL K++SK+ +R
Sbjct: 623 LFDIEEEDKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNR 682
Query: 277 EMIVRDNRRFCRHF 290
E+++RD RF HF
Sbjct: 683 EIVMRDRNRF-HHF 695
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMIL---------------------------------- 179
VW L++ACR+H+N +L E A +L
Sbjct: 444 VWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMK 503
Query: 180 -----------MIEPNNTGAYVIL----------INEALKDLLERMEQEGYVPDTKEVLL 218
+IE N T ++ INE L ++ ++ + GYVPDT VLL
Sbjct: 504 TVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLL 563
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+++EE+K+ L YH E+LA+ FG+IST T IR++KNL K++SKI R +
Sbjct: 564 NIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVI 623
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 624 IVRDRNRF-HHF 634
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S R+VF + VRD +S +I G Q+G +E L + +ML+A +K F
Sbjct: 197 SAREVFGGIIVRD-------VVSWTTILVGEAQHGRVEEVLALYDRMLLAGMKPNEVTFV 249
Query: 144 RIM----HAG-------------------------------------------------- 149
++ HAG
Sbjct: 250 GLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSEAEELITTMPY 309
Query: 150 -STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------- 192
E W LLSAC+ H + ++ +VAD +L + P + Y++L
Sbjct: 310 EPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSNVYAVNCKWDSVAKV 369
Query: 193 -----------------------------------INEALKDLLE----RMEQEGYVPDT 213
I E + LE M + GYVPDT
Sbjct: 370 RKIMAEMEIRKEPGYSWIEAGRESRMFHAGEVPLDIGEEITRFLEELVSEMRKRGYVPDT 429
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V+ D+EE +K+ L+ H ERLA+ FGI+ +P G+ IRV+KNL K +S+I
Sbjct: 430 SSVMHDLEENEKEQHLFLHSERLAVAFGILKSPPGSVIRVVKNLRVCGDCHTVMKFISEI 489
Query: 274 VHREMIVRDNRRFCRHF 290
R++IVRD RF HF
Sbjct: 490 AQRKIIVRDASRF-HHF 505
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L ++LE + GYVPDT VL D++EE+K+N LYYH E+LA+ FG++ T G T+R
Sbjct: 517 IYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLR 576
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL R +K++SK+ RE+I+RD RF HF
Sbjct: 577 ISKNLRICRDCHQASKLISKVYDREIIIRDRNRF-HHF 613
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L M GY+PDTK +L DVE+E+K+++L+YH ERLA+ FG++STP GT +R
Sbjct: 675 IYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLR 734
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
VIKNL K +SK+ RE++VRD RF
Sbjct: 735 VIKNLRVCSDCHTATKYISKLRGREILVRDTHRF 768
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 63/170 (37%)
Query: 81 RSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHA 140
+ R VFE MA RD L + NS+ Q+G +DE L+ F QM + KA
Sbjct: 459 KMAEARSVFEKMAKRDILVW-------NSMLGAYAQHGYYDETLQLFNQMQLDGEKADAV 511
Query: 141 PF----SRIMHAGSTEN------------------------------------------- 153
F S + H+GS +
Sbjct: 512 SFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLK 571
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W+TLL ACR H + A+ A+ +L +P+++GAYV+L N
Sbjct: 572 LSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSN 621
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L ++LE + GYVPDT VL D++EE+K+N LYYH E+LA+ FG++ T G T+R
Sbjct: 462 IYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLR 521
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL R +K++SK+ RE+I+RD RF HF
Sbjct: 522 ISKNLRICRDCHQASKLISKVYDREIIIRDRNRF-HHF 558
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 112/297 (37%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF---------------------- 142
IS SI G Q+G +E L + +M++++IK F
Sbjct: 305 ISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRS 364
Query: 143 ---------------------SRIMHAGSTENV------------WLTLLSACRVHRNVE 169
SR H EN+ W +LLSAC H N+E
Sbjct: 365 MTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLE 424
Query: 170 LAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLERME------------- 205
+ ++AD +L ++P + Y++L N ++ L+ ME
Sbjct: 425 MGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFG 484
Query: 206 --------------------------------QEGYVPDTKEVLLDVEEEQKKNILYYHG 233
+ GYVP+T VL D+E+++K+ L++H
Sbjct: 485 KDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHS 544
Query: 234 ERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ERLA+ +G++ GT IR++KNL + K +S IV RE++VRD R+ HF
Sbjct: 545 ERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRY-HHF 600
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 113/262 (43%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
+++ + +GC + +EG++ F M + I +R F
Sbjct: 416 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 475
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------- 190
+ M T + W LL+ACRV++NVELA+ A + IEPNN G YV
Sbjct: 476 QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWS 535
Query: 191 ------ILINEA------------------------------------LKDLLERMEQEG 208
IL+ E L +L+E+M+ G
Sbjct: 536 EASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAG 595
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y PDT VL D+++E+K L H E+LA+ FGI++ +TIRV KNL + K
Sbjct: 596 YKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIK 655
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK+V ++VRD+ RF HF
Sbjct: 656 YMSKVVGVIIVVRDSLRF-HHF 676
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 112/297 (37%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF---------------------- 142
IS SI G Q+G +E L + +M++++IK F
Sbjct: 305 ISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRS 364
Query: 143 ---------------------SRIMHAGSTENV------------WLTLLSACRVHRNVE 169
SR H EN+ W +LLSAC H N+E
Sbjct: 365 MTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLE 424
Query: 170 LAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLERME------------- 205
+ ++AD +L ++P + Y++L N ++ L+ ME
Sbjct: 425 MGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFG 484
Query: 206 --------------------------------QEGYVPDTKEVLLDVEEEQKKNILYYHG 233
+ GYVP+T VL D+E+++K+ L++H
Sbjct: 485 KDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHS 544
Query: 234 ERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ERLA+ +G++ GT IR++KNL + K +S IV RE++VRD R+ HF
Sbjct: 545 ERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRY-HHF 600
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 109/253 (43%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQML----MAKIKARHA-PFSRIMHAGSTEN-------------- 153
C G E L+FF M+ +A + + I AG ++
Sbjct: 300 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 359
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNN-------------TGAY--VILINEAL 197
W TLL+ACR+H E A KVA+++ + P + TG Y + + + +
Sbjct: 360 LTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419
Query: 198 KD----------------------------------LLE------RMEQEGYVPDTKEVL 217
D LLE RM + GYVP+TK+VL
Sbjct: 420 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 479
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
V EE+K+ ++ H E+LA+ FG+I+TP GT + ++KNL KV++KI+ R
Sbjct: 480 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 539
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 540 IVVRDTHRF-HHF 551
>gi|242089073|ref|XP_002440369.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
gi|241945654|gb|EES18799.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
Length = 642
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 105/197 (53%), Gaps = 38/197 (19%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G +E L+F ++ PF VW +LL+ +++ +++L ++
Sbjct: 452 GKSGHLNEALEFIEKL----------PFE------PNAMVWESLLNLAQMNGDIDLEDRA 495
Query: 175 ADMILMIEPNNTGAYVI-------------------LINEALKDLLER--MEQEGYVPDT 213
++++ ++P+ + L+ L +E+ + ++ YVPDT
Sbjct: 496 EELLVSLDPSKANPKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDT 555
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R+IKNL + K++S+I
Sbjct: 556 RYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRI 615
Query: 274 VHREMIVRDNRRFCRHF 290
V RE+IVRDN+RF HF
Sbjct: 616 VGRELIVRDNKRF-HHF 631
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 21/233 (9%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
H+ VD L SR+G +R+ ++++ F ++ R + A C + G K
Sbjct: 1349 HYSCLVDAL--SRAGRIREAEKVISSMPF--EASASMYRTLLNA-CRVQVDRETG-KRVA 1402
Query: 129 QMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRN-----------VELAEKVADM 177
+ L+A + A + + + + N W + SA + R V+L KV
Sbjct: 1403 EKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVH-- 1460
Query: 178 ILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLA 237
L + + + +I ++ +++R+ +EGY+PDT L+DVEEE K+ LYYH E+LA
Sbjct: 1461 -LFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLA 1519
Query: 238 LVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ +G++ TP TT+RVIKNL + K +SK+ RE+++RD RF HF
Sbjct: 1520 IAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRF-HHF 1571
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 77/287 (26%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM--------- 130
+ +G K E+ A + I+ N++ C G +EG+ F +M
Sbjct: 267 TANGCSEKALELFARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPD 326
Query: 131 -----LMAKIKARHAPFSR------IMHAGSTENVWLTLLSACRVHRNVELAEKVADMIL 179
M + R F + +M VW L+ AC+ HRN EL K M++
Sbjct: 327 IAHYGCMVDLFCRAGLFDKAEKMIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLI 386
Query: 180 MIEP-----------------NNTGAYVIL------------------------------ 192
P N TG + +
Sbjct: 387 EAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVIHEFISGD 446
Query: 193 --------INEALKDLLERMEQEGYVPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGII 243
I E L ++ ++++ GYVPDT VLLD+++E K++ L H E+LA+ FG+I
Sbjct: 447 KSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLI 506
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ST GT IR+ KNL + K++SKI R +IVRD RF HF
Sbjct: 507 STAPGTPIRIAKNLRVCGDCHNAVKLLSKIYGRCIIVRDANRF-HHF 552
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
M + GYVPDT+ VL+DVEEE+K+ +L YH E+ A+ FG+ISTP GT +RV+KNL
Sbjct: 387 MREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPLRVVKNLRVCTDC 446
Query: 264 RHGNKVVSKIVHREMIVRDNRRF 286
K +SKI R++ VRD RF
Sbjct: 447 HTATKFISKITGRQITVRDANRF 469
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 106/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG--------------- 149
+ A C +G ++G+ +F M + AK + + AG
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W LL A R+HRN EL A+ I +EP N G YV+L N
Sbjct: 550 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 609
Query: 195 ------------------------------------EALKDLLE----RMEQEGYVPDTK 214
E + LE RM++ GYV T
Sbjct: 610 VMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATD 669
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DVEEE+K+++L YH E+LA+ +GI++ P G IRVIKNL + K +S I
Sbjct: 670 MVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIE 729
Query: 275 HREMIVRDNRRFCRHF 290
R +++RD+ RF HF
Sbjct: 730 GRLILLRDSNRF-HHF 744
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 106/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG--------------- 149
+ A C +G ++G+ +F M + AK + + AG
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W LL A R+HRN EL A+ I +EP N G YV+L N
Sbjct: 550 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 609
Query: 195 ------------------------------------EALKDLLE----RMEQEGYVPDTK 214
E + LE RM++ GYV T
Sbjct: 610 VMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATD 669
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DVEEE+K+++L YH E+LA+ +GI++ P G IRVIKNL + K +S I
Sbjct: 670 MVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIE 729
Query: 275 HREMIVRDNRRFCRHF 290
R +++RD+ RF HF
Sbjct: 730 GRLILLRDSNRF-HHF 744
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAGSTE 152
C + G +EGL+ F +M M + AR M G T+
Sbjct: 351 ACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGNMPTGPTD 410
Query: 153 NVWLTLLSACRVHRNVELAEKV------------ADMILMIE----PNNTGAYVILINEA 196
W +LL+ACR+H N+ELAE+ D I++ + +N A EA
Sbjct: 411 TAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARAHNRDAAAARRTEA 470
Query: 197 LK-----------------------------------DLLERMEQ----EGYVPDTKEVL 217
+ ++L +ME EGY PDT E+
Sbjct: 471 VDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRFEGYTPDTSELA 530
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LD EE+K+ ++ H ++LA+ FG++STP+G +RV+ NL + + ++S+I RE
Sbjct: 531 LDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGRE 590
Query: 278 MIVRDNRRFCR 288
++VRD RF R
Sbjct: 591 IVVRDRNRFHR 601
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
W +LL+ACR HR+++ A++VA+ +L +EP YV L N A+ + + M
Sbjct: 628 AWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMA 687
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
++G YVPDTK VL
Sbjct: 688 EQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLH 747
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
V+E++K+ +L+ H ERLA+ G+ISTP GT +RV KNL K++SKI R++
Sbjct: 748 FVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKI 807
Query: 279 IVRDNRRF 286
+VRD RF
Sbjct: 808 VVRDPTRF 815
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
+ R VF M RD +S SI G Q+G E L + QM++A+IK F
Sbjct: 290 AARNVFNRMLHRD-------VVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFV 342
Query: 144 RIM----HAG-------------------------------------------------- 149
++ HAG
Sbjct: 343 GLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPH 402
Query: 150 -STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
E W LLSAC+ H N E+ ++AD +L + + YV+L N
Sbjct: 403 KPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRV 462
Query: 195 ---------------------------------EALKD----LLERMEQE----GYVPDT 213
+KD LL+ ++ E GY+PDT
Sbjct: 463 RKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDT 522
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D+EE++K+ L++H ER A+ +G++ GT IR++KNL K+ S I
Sbjct: 523 SYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSI 582
Query: 274 VHREMIVRDNRRFCRHF 290
VH+E+IVRD R+ HF
Sbjct: 583 VHKEIIVRDATRY-HHF 598
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 55/187 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQ 206
W +LL+ACR HR+++ A++VA+ +L +EP YV L N A+ + + M +
Sbjct: 542 WTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAE 601
Query: 207 EG-----------------------------------------------YVPDTKEVLLD 219
+G YVPDTK VL
Sbjct: 602 QGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHF 661
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
V+E++K+ +L+ H ERLA+ G+ISTP GT +RV KNL K++SKI R+++
Sbjct: 662 VDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIV 721
Query: 280 VRDNRRF 286
VRD RF
Sbjct: 722 VRDPTRF 728
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 108/261 (41%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG---------- 149
I+ + A C +G ++G+ +F M + AK + + AG
Sbjct: 360 ITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMK 419
Query: 150 -----STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
+W LL A R+HRN EL A+ I +EP N G YV+L N
Sbjct: 420 DMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRD 479
Query: 195 -----------------------------------------EALKDLLE----RMEQEGY 209
E + LE RM++ GY
Sbjct: 480 ARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGY 539
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
V T VL DVEEE+K+++L YH E+LA+ +GI++ P G IRVIKNL + K
Sbjct: 540 VSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKY 599
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S I R +++RD+ RF HF
Sbjct: 600 ISAIEGRLILLRDSNRF-HHF 619
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 55/198 (27%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
R M VW LL++C++H NVELAE + ++ +EP+++G YVIL N
Sbjct: 409 RNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWE 468
Query: 195 ------------------------------------------EALKDLLERME----QEG 208
+A+ L+R+E + G
Sbjct: 469 GVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAG 528
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y PDT V DVEE++K +++ H ERLA+ FG+IST GT + + KNL K
Sbjct: 529 YAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIK 588
Query: 269 VVSKIVHREMIVRDNRRF 286
+SKI+ RE+ VRD R+
Sbjct: 589 FISKIMEREITVRDVNRY 606
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 117/288 (40%), Gaps = 93/288 (32%)
Query: 94 VRDFLEYCDY----AISRNSITAGCGQNGPFDEGLKFF---------------------- 127
V+ F CD +++ ++ +G G DEGL F
Sbjct: 303 VQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDL 362
Query: 128 ----GQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP 183
GQ+ A PF T +W +LL ACRVH NV + E VA +L IEP
Sbjct: 363 LGRSGQLQKALNLIEKMPFQ------PTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEP 416
Query: 184 NNTG------------------------------------AYVIL--------------- 192
N G +++IL
Sbjct: 417 ENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHP 476
Query: 193 ----INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
IN +K++ ++ G+VPD VL DV++EQK+ +L H E+LA+ FG++STP
Sbjct: 477 RKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSD 536
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
TI+V+KNL + K VSK+ RE+ +RD RF H + AC
Sbjct: 537 LTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRF--HLITEGAC 582
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 103/231 (44%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G FDE +K G++ PF + VW LL AC +H+N++L +
Sbjct: 556 GRSGQFDEAVKLIGEI----------PFQ------PSVMVWRALLGACVIHKNLDLGKVC 599
Query: 175 ADMILMIEPNNTGAYVILIN----------------------EALKDLLERMEQEGYV-- 210
A +L +EP + +V+L N + L +E +G V
Sbjct: 600 AQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHY 659
Query: 211 --------PDTK-----------------------EVLLDVEEEQKKNILYYHGERLALV 239
P+ K VLLDVE+++K+ +L+ H ERLAL
Sbjct: 660 FTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALA 719
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG+I P G +IR+IKNL K+VSKIV RE+++RD RF HF
Sbjct: 720 FGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRF-HHF 769
>gi|190612851|gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L M++ GY+P T+ VL DVEEEQK+ L+YH E+LA+ FG+ISTP GT IR
Sbjct: 52 IYAKLERLTGEMKETGYMPHTEFVLHDVEEEQKEQFLFYHSEKLAIAFGLISTPAGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +S+IV RE+++RD RF HF
Sbjct: 112 VIKNLRVCGDCHIATKFISRIVEREIVLRDALRF-HHF 148
>gi|125583346|gb|EAZ24277.1| hypothetical protein OsJ_08028 [Oryza sativa Japonica Group]
Length = 613
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAGSTE 152
C + G +EGL+ F +M M + AR M G T+
Sbjct: 351 ACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTD 410
Query: 153 NVWLTLLSACRVHRNVELAEKV------------ADMILMIE----PNNTGAYVILINEA 196
W +LL+ACR+H N+ELAE+ D I++ + +N A EA
Sbjct: 411 TAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARAHNRDAAAARRTEA 470
Query: 197 LK-----------------------------------DLLERMEQ----EGYVPDTKEVL 217
+ ++L +ME EGY PDT E+
Sbjct: 471 VDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRFEGYTPDTSELA 530
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LD EE+K+ ++ H ++LA+ FG++STP+G +RV+ NL + + ++S+I RE
Sbjct: 531 LDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGRE 590
Query: 278 MIVRDNRRFCR 288
++VRD RF R
Sbjct: 591 IVVRDRNRFHR 601
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 56/196 (28%)
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA--------------------- 188
+ +VW LL A R+H++VEL + A+M+ ++EP +G
Sbjct: 728 ANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVR 787
Query: 189 -----------------------YVILINE-----------ALKDLLERMEQEGYVPDTK 214
Y L+ + L +L + M++ GYVP +
Sbjct: 788 RLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVE 847
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
L DVE+ +K+ +LY+H E+LA+ FG+I+TP G IRV KNL K + KIV
Sbjct: 848 IDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIV 907
Query: 275 HREMIVRDNRRFCRHF 290
RE+IVRD RF HF
Sbjct: 908 SREIIVRDINRF-HHF 922
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 87/267 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN----------- 153
I+ ++ C G + GL+ F M K H R+ H G +
Sbjct: 351 ITFTAVLTACSHAGMVERGLEIFESM-----KRDHGVEPRLEHYGCMVDLLGRAGKLRKA 405
Query: 154 --------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
+W LL ACR+H+NVE+ E+V ++L ++P +G YV+L N
Sbjct: 406 EKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARA 465
Query: 195 ----------EALKD-----------------------------------------LLER 203
+ +KD +L +
Sbjct: 466 NKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPK 525
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
++ GYV +T E + D++EE+K+ L+ H E+LA+ +GI+ T IR++KNL
Sbjct: 526 IKLAGYVGNTAETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDC 585
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
K++SK+ E+IVRD RF HF
Sbjct: 586 HTATKLISKVFEVELIVRDRNRF-HHF 611
>gi|242062828|ref|XP_002452703.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
gi|241932534|gb|EES05679.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
Length = 622
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 81/254 (31%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSR-----------------------IMHAG 149
C + G ++GL+ F +M +++ + AP ++ M G
Sbjct: 360 ACSRAGLLEDGLRCFDRM---RLEHKFAPNAQHYGCMVDLMARAGRLDDARALIGSMPTG 416
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
T+ W +LL+ACR+H +++LAE + + + N G YVI+ +
Sbjct: 417 PTDTAWRSLLNACRIHGDLDLAESALEELRSLGAANAGDYVIVADMHARAKNWAAAAAFR 476
Query: 195 -EAL--------------------------------KDLLERMEQ-------EGYVPDTK 214
EA+ +D+ E + Q +GY PDT
Sbjct: 477 TEAVDWGLAQSPGFSAVEVRGELHRFVSQDMSHPRTRDIYEMLHQMEWQLRFDGYRPDTS 536
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EV LDV EE+K++++ H ++LA+ FG++STP+G +RV+ NL + + ++S+I
Sbjct: 537 EVALDVGEEEKRHVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIF 596
Query: 275 HREMIVRDNRRFCR 288
RE+++RD R R
Sbjct: 597 GREIVIRDRNRLHR 610
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 100/232 (43%), Gaps = 73/232 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELA--- 171
G+NG F E K +M PF E +W ++L+ACR+H+N LA
Sbjct: 600 GRNGRFAEAEKLMDEM----------PFE------PDEIMWSSVLNACRIHKNQSLAERA 643
Query: 172 -------EKVADMILMIEPNNTGA-----------------------------------Y 189
EK+ D + +N A +
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 703
Query: 190 VILINEA-----------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLAL 238
V N+ + +L +E+EGY PDT V+ DV+E+ K L YH ERLA+
Sbjct: 704 VFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAV 763
Query: 239 VFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
F +ISTP+G I V+KNL + R K++SKIV RE+ VRD RF HF
Sbjct: 764 AFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRF-HHF 814
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENV---- 154
A++ ++ GC G ++GL +F M ++ K + + AG +
Sbjct: 480 AVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFI 539
Query: 155 -----------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
W + L AC++H ++E A+ AD ++ +EP N+GA+V+L N
Sbjct: 540 NNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWE 599
Query: 195 ------EALKD----------------------------------------LLERMEQEG 208
+ +KD LL+++++ G
Sbjct: 600 DVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIG 659
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVP T+ VL+D+++ K+ +L+YH ER+A+ F +++ P G I V KNL K
Sbjct: 660 YVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALK 719
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK+ R +IVRD RF HF
Sbjct: 720 FISKVTERNIIVRDISRF-HHF 740
>gi|302142629|emb|CBI19832.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 53/222 (23%)
Query: 86 RKVFEIMAVRDFLEY----------CDY-------AISRNSITAGCGQNGPFDEGLKFFG 128
R+VF M V+D + + C + ++S N++ A GQ+G + L+ F
Sbjct: 348 RQVFNQMPVKDLVSWNAILSGYAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFE 407
Query: 129 QMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA 188
ML I F LT+LS C +
Sbjct: 408 LMLKEDILPDRITF-------------LTVLSTC----------------------SHAG 432
Query: 189 YVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
V + L++L +M + GY+PDTK VL D+E EQK+ +L H E+LA+ FG++ P G
Sbjct: 433 LVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLG 492
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T+RV KNL + K +SK+V RE++VRD +RF HF
Sbjct: 493 ATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRF-HHF 533
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 113/262 (43%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
+++ + +GC + +EG++ F M + I +R F
Sbjct: 502 SVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFI 561
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------- 190
+ M T + W LL+ACRV++NVELA+ A + IEPNN G YV
Sbjct: 562 QGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWS 621
Query: 191 ------ILINEA------------------------------------LKDLLERMEQEG 208
IL+ E L +L+E+M+ G
Sbjct: 622 EASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAG 681
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y PDT VL D+++E+K L H E+LA+ FGI++ +TIRV KNL + K
Sbjct: 682 YKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIK 741
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK+V ++VRD+ RF HF
Sbjct: 742 YMSKVVGVIIVVRDSLRF-HHF 762
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
++ + L ERM +EGYVPDT VL DV+E +K +L YH E+LA+ FG++ P G TIR
Sbjct: 754 VHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIR 813
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +S++V RE+++RD RRF HF
Sbjct: 814 VAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRF-HHF 850
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G +E ++ +M PF + +VW LL A R+H++VEL +
Sbjct: 682 GRAGKINEAVELVNKM----------PFE------ANASVWGALLGAARIHKDVELGRRA 725
Query: 175 ADMILMIEPNNTGA--------------------------------------------YV 190
A+M+ ++EP +G Y
Sbjct: 726 AEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYT 785
Query: 191 ILINE-----------ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L+ + L +L + M++ GYVP + L DVE+ +K+ +LY+H E+LA+
Sbjct: 786 FLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVA 845
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG+I+TP G IRV KNL K + KIV RE+IVRD RF HF
Sbjct: 846 FGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRF-HHF 895
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 74/250 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-------------------MHAGSTEN 153
C G DEG +F QM ++I+ ++ + M TE+
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW LL++C VH+N ELA AD + + P ++G ++ L N
Sbjct: 387 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 195 -----------------------------EALKDLLER-------MEQEGYVPDTKEVLL 218
E K++ E+ ME+ GY+ DT VL
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLR 506
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+V+ ++K + YH ERLA+ FG+I+ P IRV+KNL + K +S R +
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVI 566
Query: 279 IVRDNRRFCR 288
IVRDN RF R
Sbjct: 567 IVRDNNRFHR 576
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L +M+ GYVPD VL DVEE++K+ IL H ERLA+VFGIISTP + IR
Sbjct: 717 IYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIR 776
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +SKI RE+IVRD+ RF HF
Sbjct: 777 IFKNLRVCGDCHNATKYISKITEREIIVRDSNRF-HHF 813
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 105 ISRNSITAGCGQNGPFDEG----------------LKFFGQM--LMAKIKARHAPFSRI- 145
I+ S+ + C +G DE LK +G M L + ++ +
Sbjct: 554 ITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVS 613
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
M + ++W TLL+ACR+H N EL +D +L ++ N G YV+L N
Sbjct: 614 NMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSN 663
>gi|357115222|ref|XP_003559390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 306
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 195 EALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
E +++L E + GYVPDT+ VL D++E+ K L YH ERLA+ FG++STP GT +RV+
Sbjct: 201 EKVRELHEEIRAAGYVPDTRFVLHDIDEDAKVQALMYHSERLAIAFGLVSTPPGTPLRVM 260
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL + K+++K+ RE+IVRDN+RF HF
Sbjct: 261 KNLRICGDCHNAVKLMAKVTGREIIVRDNKRF-HHF 295
>gi|297846982|ref|XP_002891372.1| hypothetical protein ARALYDRAFT_473903 [Arabidopsis lyrata subsp.
lyrata]
gi|297337214|gb|EFH67631.1| hypothetical protein ARALYDRAFT_473903 [Arabidopsis lyrata subsp.
lyrata]
Length = 415
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
LK L + + GYVP+TK VL D++EE K+ L +H ERLA+ FG+I+TP GTTIRV+KN
Sbjct: 312 LKSLAKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGLINTPPGTTIRVMKN 371
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
L + K++S I RE+IVRDN+RF H + +C
Sbjct: 372 LRICGDCHNFIKILSSIEDREIIVRDNKRF--HHFRYGSC 409
>gi|326525961|dbj|BAJ93157.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 615
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 76/252 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAGSTE 152
C ++G +EGL+ F +M M + AR M G T+
Sbjct: 352 ACSRSGLLEEGLRCFDRMRLERKVAPNAQHYGCMVDLMARAGRMDEARELIGSMPTGPTD 411
Query: 153 NVWLTLLSACRVHRNVELAEK-VADMILMIEPNNTGAYVILINEALK------------- 198
W +LL+ACR+H ++ELA++ + ++ + N G Y+IL + K
Sbjct: 412 TAWRSLLNACRIHGDIELADRALQELARLGGAVNAGDYIILADMHAKAKNWEEAVALRTE 471
Query: 199 --------------------------------------DLLERMEQ----EGYVPDTKEV 216
++L +ME EGY PDT EV
Sbjct: 472 AVHRGLAQAPGFSAVEVHGKMHRFTSQDRSHPRTADIYEMLHQMEWQLRFEGYKPDTSEV 531
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L+ ++E+K+ + H ++LA+ FG++STP+GT +RV+ NL + + ++S+I R
Sbjct: 532 ALEADDEEKRRAVAAHSQKLAMAFGLLSTPEGTPVRVVTNLRMSKECHAYSALISEIFGR 591
Query: 277 EMIVRDNRRFCR 288
E++VRD RF R
Sbjct: 592 EVVVRDRNRFHR 603
>gi|294461983|gb|ADE76547.1| unknown [Picea sitchensis]
Length = 210
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 56/195 (28%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------- 194
T +VW LL++CR+H N+ L + A+ + + P+ G YV L N
Sbjct: 6 TADVWGALLASCRIHGNMWLGKLAAERLFKLRPDRAGTYVALSNIYSAAGRWDEAAKLRR 65
Query: 195 -----------------------------------EALKDLLERM----EQEGYVPDTKE 215
E + +L+++ + G+VP+T
Sbjct: 66 LMNDRGVKKEPGYSWVQVKNMVHTFSVGDISHPQIEDIYAMLDKLAGQMKTAGHVPNTNF 125
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
L DV++EQK+ LY+H E+LA+ F +ISTP GT+I++ KNL K +SKI
Sbjct: 126 ALHDVDDEQKERTLYHHSEKLAIAFALISTPHGTSIQINKNLRVCVDCHTATKFISKIAG 185
Query: 276 REMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 186 REIVVRDANRF-HHF 199
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 75/255 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAK--IKARHAPFSRIMHA 148
S+ + C + G + GL+ F M L+ + + R F + M
Sbjct: 420 SVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPI 479
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILI--------------- 193
T +VW LL AC++H +L + A+ + ++P+++G +V+
Sbjct: 480 LPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIV 539
Query: 194 ------------------------------------NEALKDLLERMEQE----GYVPDT 213
N ++ +L ++ E GYVPD
Sbjct: 540 RKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDA 599
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D+EEE+K + ++YH E++AL FG+I+ P G IR+ KNL K +SKI
Sbjct: 600 NLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKI 659
Query: 274 VHREMIVRDNRRFCR 288
V RE+IVRDN RF R
Sbjct: 660 VGREIIVRDNNRFHR 674
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 111/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG---------- 149
I+ S+ C G +EGL+FF M + A +K + AG
Sbjct: 435 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 494
Query: 150 -----STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
E +W L ACR H++V LAEK A +L ++P N G Y++L N
Sbjct: 495 SMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWED 554
Query: 195 -EALKDLLE--RMEQ-EGYV------------------PDTKE----------------- 215
+DL+ R+++ G+ P +KE
Sbjct: 555 VAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGY 614
Query: 216 ------VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VL DV+EE K ILY H E+LA+ FG+I+TP+ T IR+IKNL K+
Sbjct: 615 VPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKL 674
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
VS I R +IVRD RF HF
Sbjct: 675 VSAITGRVIIVRDANRF-HHF 694
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 77/263 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRI----------------- 145
++S + + C +G +EGL F M + K+ R ++ +
Sbjct: 513 SVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLM 572
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMIL-MIEPNNTGAYVILIN-------- 194
M E +W ++L+ACR+H+N ELA + AD + M E + YV + N
Sbjct: 573 AEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQW 632
Query: 195 -------EALKD----------------------------------------LLERMEQE 207
+A++D L + ME+
Sbjct: 633 ENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEEL 692
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
GY PDT L + +E+ K L YH ERLA+ F +ISTP+G+ I V+KNL +
Sbjct: 693 GYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAI 752
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
KV+SKIV RE+ VRD+ RF HF
Sbjct: 753 KVISKIVGREITVRDSTRF-HHF 774
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ C G DEG +F +M +M +I+ + AG +
Sbjct: 330 VLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ 389
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
W TLL AC +H ++ L E +L +EP ++G YV+L N
Sbjct: 390 PNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIR 449
Query: 195 -EALKD-----------------------------------LLERMEQ----EGYVPDTK 214
LKD LLE++ + EGYVP T
Sbjct: 450 RSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTA 509
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL D+EEE+K+ L YH E+ A+ F ++T GTTIRV+KNL K+++K+
Sbjct: 510 NVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVY 569
Query: 275 HREMIVRDNRRFCRHF 290
RE+++RD RF HF
Sbjct: 570 DREIVIRDRGRF-HHF 584
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 77/263 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRI----------------- 145
++S + + C +G +EGL F M + K+ R ++ +
Sbjct: 553 SVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLM 612
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMIL-MIEPNNTGAYVILIN-------- 194
M E +W ++L+ACR+H+N ELA + AD + M E + YV + N
Sbjct: 613 AEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQW 672
Query: 195 -------EALKD----------------------------------------LLERMEQE 207
+A++D L + ME+
Sbjct: 673 ENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEEL 732
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
GY PDT L + +E+ K L YH ERLA+ F +ISTP+G+ I V+KNL +
Sbjct: 733 GYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAI 792
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
KV+SKIV RE+ VRD+ RF HF
Sbjct: 793 KVISKIVGREITVRDSTRF-HHF 814
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 56/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL ACR+H N++L E +L +EPNN YV+L N
Sbjct: 414 IWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMD 473
Query: 195 --------------------------------EALKDLLERMEQE----GYVPDTKEVLL 218
E + LL M ++ GYV DT
Sbjct: 474 CRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGMASY 533
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K++ L YH E+LAL FG++ +P G T+R++KNL + K+VSK+ R++
Sbjct: 534 DIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDI 593
Query: 279 IVRDNRRFCRHFL 291
VRD RF HF+
Sbjct: 594 SVRDRNRF-HHFV 605
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 107/261 (40%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARH------APFSR 144
IS S+ C G DEG F M M + R A
Sbjct: 380 ISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIE 439
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M VW +LL +CR+H NVELAE+ + + +EP N G YV+L +
Sbjct: 440 NMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDG 499
Query: 195 -EALKDLLE------------------------------RMEQ--------------EGY 209
+ +K LLE RMEQ EGY
Sbjct: 500 VKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGY 559
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP TK VL D++ +K+ I+ H E+LA+ FG+I++ G IR+ K+L K
Sbjct: 560 VPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKF 619
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK ++E++VRD RF HF
Sbjct: 620 ISKFANKEILVRDVNRF-HHF 639
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 27/236 (11%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
HF VD L +R+G V+K +E + + I R ++ C +G D L
Sbjct: 362 HFGCMVDLL--ARAGQVKKAYEYILKMPMQP--NVVIWR-TLLGACTVHG--DSDLAELA 414
Query: 129 QMLMAKIKARHA-PFSRIMHAGSTENVWLTL-----------LSACRVHRNVELAEKVAD 176
+M + +++ H+ + + + ++E W + + H VE+ +V +
Sbjct: 415 RMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHE 474
Query: 177 MIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
++ P N +I LK++ +R+ EGYVP V +DVEEE+K+N L YH E
Sbjct: 475 FLMGDKSHPQND-----MIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSE 529
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++A+ F +ISTP+ IRV+KNL K+VSK+ +RE++VRD RF HF
Sbjct: 530 KIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRF-HHF 584
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W TLLSAC+ +N ++AE++A ++ ++P+++ +YV+L N +A++
Sbjct: 507 IWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMR 566
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D ++ ++ Q GY PD VL
Sbjct: 567 DNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLH 626
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K+ L +H E+LA+ F +S P+G IRV+KNL K++S++ RE+
Sbjct: 627 DMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREI 686
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 687 VVRDVSRF-HHF 697
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM----------------- 130
A++ F E I N IT A C G EG +F +M
Sbjct: 385 AMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMV 444
Query: 131 -LMAKIKARHAPFSRI--MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNN-- 185
L+ + + I M VW +LL ACR+H+NVEL E A + ++P+N
Sbjct: 445 DLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCG 504
Query: 186 --------------------------------TGAYVIL--------------------- 192
T Y I+
Sbjct: 505 YYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEK 564
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L +L ++++ GY+P+ VL DV+ E+K +L H E+LA+ FGI+++ G+ I+
Sbjct: 565 IYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQ 624
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K++SKIV+RE+++RD++RF HF
Sbjct: 625 IIKNLRICGDCHFAIKLISKIVNREIVIRDSKRF-HHF 661
>gi|5668803|gb|AAD46029.1|AC007519_14 F16N3.14 [Arabidopsis thaliana]
Length = 571
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
LK L + + GYVP+TK VL D++EE K+ L +H ERLA+ FGII+TP GTTIRV+KN
Sbjct: 468 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 527
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K++S I RE+IVRDN+RF HF
Sbjct: 528 LRICGDCHNFIKILSSIEDREIIVRDNKRF-HHF 560
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 76/254 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN-------------- 153
C +G DEG +FF M ++ KI+ + AG E
Sbjct: 373 ACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDT 432
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W++LL+ACR+H+N+ L +++AD ++ N+G Y++L N
Sbjct: 433 VMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMM 492
Query: 195 ---------------------------------EALKDLLERM----EQEGYVPDTKEVL 217
+ + +LE+M +++G+VP T+ VL
Sbjct: 493 KASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVL 552
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++E K+ L H E+LA+ FG+IST G TI+++KNL + K++SKI R+
Sbjct: 553 HDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRK 612
Query: 278 MIVRDNRRFCRHFL 291
++ RD RF HF+
Sbjct: 613 IVFRDRNRF-HHFV 625
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 76/254 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN-------------- 153
C +G DEG +FF M ++ KI+ + AG E
Sbjct: 372 ACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDT 431
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W++LL+ACR+H+N+ L +++AD ++ N+G Y++L N
Sbjct: 432 VMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMM 491
Query: 195 ---------------------------------EALKDLLERM----EQEGYVPDTKEVL 217
+ + +LE+M +++G+VP T+ VL
Sbjct: 492 KASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVL 551
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++E K+ L H E+LA+ FG+IST G TI+++KNL + K++SKI R+
Sbjct: 552 HDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRK 611
Query: 278 MIVRDNRRFCRHFL 291
++ RD RF HF+
Sbjct: 612 IVFRDRNRF-HHFV 624
>gi|41052951|dbj|BAD07861.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 312
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAGSTE 152
C + G +EGL+ F +M M + AR M G T+
Sbjct: 50 ACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTD 109
Query: 153 NVWLTLLSACRVHRNVELAEKV------------ADMILMIE----PNNTGAYVILINEA 196
W +LL+ACR+H N+ELAE+ D I++ + +N A EA
Sbjct: 110 TAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARAHNRDAAAARRTEA 169
Query: 197 LK-----------------------------------DLLERMEQ----EGYVPDTKEVL 217
+ ++L +ME EGY PDT E+
Sbjct: 170 VDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRFEGYTPDTSELA 229
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LD EE+K+ ++ H ++LA+ FG++STP+G +RV+ NL + + ++S+I RE
Sbjct: 230 LDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGRE 289
Query: 278 MIVRDNRRFCR 288
++VRD RF R
Sbjct: 290 IVVRDRNRFHR 300
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 21/233 (9%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
H+ VD L SR+G + + ++++ F ++ R + A C + G K
Sbjct: 1378 HYSCLVDAL--SRAGRIEEAEKVISSMPF--EASASMYRTLLNA-CRVQVDRETG-KRVA 1431
Query: 129 QMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNV-----------ELAEKVADM 177
+ L+A + A + + + + N W + SA + R V +L KV
Sbjct: 1432 EKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVH-- 1489
Query: 178 ILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLA 237
L + + + +I ++ +++R+ +EGYVPDT L+DVEEE K+ LYYH E+LA
Sbjct: 1490 -LFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLA 1548
Query: 238 LVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ +G++ TP TT+RVIKNL K +SK+ RE+++RD RF HF
Sbjct: 1549 IAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRF-HHF 1600
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 56/191 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
W+T L+ACR+H +EL E A+ + ++P++T Y+ + N E + + ++ME
Sbjct: 615 AWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
+ G YVPDTK VL
Sbjct: 675 ERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLH 734
Query: 219 DVEEEQKKNILYYHGERLALVFGIIST-PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV E +K+ +L YH E++A+ FG++S+ G IRV+KNL K +++I R+
Sbjct: 735 DVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRD 794
Query: 278 MIVRDNRRFCR 288
+IVRD RF R
Sbjct: 795 IIVRDCNRFHR 805
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 132/308 (42%), Gaps = 87/308 (28%)
Query: 64 RQVD---IHFDGGVDGLRPSRSGSVR-KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGP 119
RQVD + ++ + G G K+FE M ++ LE I+ + + C G
Sbjct: 458 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN-LEL--DGITFIGVISACTHAGL 514
Query: 120 FDEGLKFFGQML--------------MAKIKARHAPFSRIMH--------AGSTENVWLT 157
+EG ++F M+ M + +R + M AG+T +W T
Sbjct: 515 VNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGAT--IWRT 572
Query: 158 LLSACRVHRNV---ELAE-------------------------------KVADMILMIEP 183
LL+ACRVH NV ELA KV ++ M +
Sbjct: 573 LLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKV 632
Query: 184 NNTGAYVIL---------------------INEALKDLLERMEQEGYVPDTKEVLLDVEE 222
Y + I L++L R++ GY PDTK VL DVEE
Sbjct: 633 KKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEE 692
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
E K+ IL H ERLA+ FG+I+TP GT I+++KNL K++SKI R+++VRD
Sbjct: 693 EHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRD 752
Query: 283 NRRFCRHF 290
+ RF HF
Sbjct: 753 SNRF-HHF 759
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEG---LKFFGQML-----------MAKIKARHAPFS------R 144
I+ + + CG +G +G K FG+ M + R+
Sbjct: 442 ITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIH 501
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN-------------NTGAY-- 189
IM + VWL LLS+ H NV +AE+ A +L ++PN +TG +
Sbjct: 502 IMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTE 561
Query: 190 VILINEALKD----------------------------------------LLERMEQEGY 209
V I + +KD L ++++ GY
Sbjct: 562 VSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGY 621
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD K DVE EQK+ +L YH ERLA+ FG+IST +G+TI V+KNL + K+
Sbjct: 622 VPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKL 681
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
SK+V RE++VRD RF HF
Sbjct: 682 TSKVVGREIVVRDPSRF-HHF 701
>gi|334183116|ref|NP_175189.2| putative lipoyltransferase [Arabidopsis thaliana]
gi|193806408|sp|P0C7R1.1|PPR74_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g47580, chloroplastic; Flags: Precursor
gi|332194069|gb|AEE32190.1| putative lipoyltransferase [Arabidopsis thaliana]
Length = 239
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ + AYV LK L + + GYVP+TK VL D++EE K+ L +H ERLA+ FGII
Sbjct: 128 DRSKAYV-----KLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGII 182
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+TP GTTIRV+KNL + K++S I RE+IVRDN+RF HF
Sbjct: 183 NTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRF-HHF 228
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W TLLSAC+ +N ++AE++A ++ ++P+++ +YV+L N +A++
Sbjct: 445 IWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMR 504
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D ++ ++ Q GY PD VL
Sbjct: 505 DNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLH 564
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K+ L +H E+LA+ F +S P+G IRV+KNL K++S++ RE+
Sbjct: 565 DMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREI 624
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 625 VVRDVSRF-HHF 635
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 102/258 (39%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPF-------SRIMH 147
S+ C G DEG K F M M + R S
Sbjct: 520 SVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQ 579
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
+ VW LL AC VH+N +LA+ + + ++ N G YV+L N
Sbjct: 580 SAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAV 639
Query: 195 --------------------------------------EALKDLLER----MEQEGYVPD 212
EA+ LER M + GY P
Sbjct: 640 VRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPV 699
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T+ L DVEEE+K++++ H E+LA+ FG++ST GT IR+IKNL + K +SK
Sbjct: 700 TEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISK 759
Query: 273 IVHREMIVRDNRRFCRHF 290
+ R ++VRD RF HF
Sbjct: 760 VTQRLIVVRDASRF-HHF 776
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 108/254 (42%), Gaps = 76/254 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK----IKARHA-----------------PFSRIMH 147
++ +GC G D GL+ F +M+ K + H F + M
Sbjct: 319 AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 378
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKD 199
T +W +LL ACRVH+NV + E VA +L IE N G YVIL N + ++
Sbjct: 379 FEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRT 438
Query: 200 LLERMEQEGYV-----------------------------------------------PD 212
+ E M+++ + P+
Sbjct: 439 VRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPE 498
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL DV++EQK+ IL H E+LAL FG+I TP GT +R+IKNL + K +S+
Sbjct: 499 LSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSR 558
Query: 273 IVHREMIVRDNRRF 286
+ RE+ +RD RF
Sbjct: 559 VYGREVSLRDKNRF 572
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 57/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W TLLSACR+H +VE+A++V + ++ + P + G +V+L N
Sbjct: 518 IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMR 577
Query: 195 -----------------------------EALKDLLERME-------QEGYVPDTKEVLL 218
+D+ E++E + GYVPDT+ VL
Sbjct: 578 EMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQ 637
Query: 219 DVEEEQKKNILYYHGERLALVFGII-STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++EE+K LYYH E+LA+ F + S TTIR++KNL K VSKIV R+
Sbjct: 638 DLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRD 697
Query: 278 MIVRDNRRFCRHF 290
+I RD +RF HF
Sbjct: 698 IIARDVKRF-HHF 709
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 103/231 (44%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G +E L F M + HAG+ W LL+ACR+++N+EL E
Sbjct: 390 GRAGRLEEALNFINTMPLKP------------HAGA----WGALLNACRMYKNMELGEFA 433
Query: 175 ADMILMIEPNNTGAYVILIN---------------EALK--------------------- 198
+ ++ +E N GAYV L N +++K
Sbjct: 434 SRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHE 493
Query: 199 -----------DLLERMEQE--------GYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
D++E M E GYV T VL D+EEE+K++ L H E++A+
Sbjct: 494 FFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALCKHSEKMAIA 553
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG+ S +G IR++KNL +K++SKI RE+IVRD RF HF
Sbjct: 554 FGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRF-HHF 603
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 114/257 (44%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKI-KARHAP-FSRIMHA 148
S+ + C G DEGL +F M L+ + K A F M
Sbjct: 668 SLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPV 727
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA-------------------- 188
T+ VW +LL+AC++H N+ELA K AD + ++ ++ A
Sbjct: 728 PPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENV 787
Query: 189 ----------------YVILINEA-------------------LKDLLERMEQEGYVPDT 213
+V L N+ L++L + + + GY+PDT
Sbjct: 788 RKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDT 847
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D +EEQK++ L+ H ER+AL FG+I++ +G+ +R+ KNL K+VS+I
Sbjct: 848 SYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQI 907
Query: 274 VHREMIVRDNRRFCRHF 290
+ R++I+RD RF HF
Sbjct: 908 IGRKIILRDAYRF-HHF 923
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 77/262 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSR------ 144
+S SI C +G ++G +FF M M + +R S+
Sbjct: 534 VSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIE 593
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
+ +W LL CR + ++ELAEKVA+ + +EP N+G YV+L N E
Sbjct: 594 TLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEE 653
Query: 197 LKDLLE------------------------------------------------RMEQEG 208
+K L E +M++EG
Sbjct: 654 VKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEG 713
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+ P TK L++ +E QK+ L H E+LA+ FG+++ P TIRV KNL K
Sbjct: 714 HFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAK 773
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SK RE+++RD RF HF
Sbjct: 774 FMSKETRREIVLRDPNRF-HHF 794
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 81/262 (30%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S+ K+F I R E+C N + G+ G DE +KF G+M + P S
Sbjct: 396 SMDKLFGIQPER---EHC------NCMVDLLGRAGKLDEAMKFIGEM-------KFEPDS 439
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
I W TLL ACR+H+N LA A IL +EP + GA ++L N
Sbjct: 440 VI---------WRTLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWS 490
Query: 195 ------EALKD-----------------------------LLERMEQE-----------G 208
+ ++D +R+ QE G
Sbjct: 491 NAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLG 550
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVP T+ VL D+ EQK+++L YH E+LA+ FG +++ +G +R++KNL K
Sbjct: 551 YVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAK 610
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+VSK + +I+RD RF HF
Sbjct: 611 LVSKTEGKAIIIRDPVRF-HHF 631
>gi|302768253|ref|XP_002967546.1| hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
gi|300164284|gb|EFJ30893.1| hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
Length = 281
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
M + GYVPDT+ VL+DVEEE+K+ +L YH E+ A+ FG+ISTP GT +RV+KNL
Sbjct: 185 MREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPLRVVKNLRVCTDC 244
Query: 264 RHGNKVVSKIVHREMIVRDNRRF 286
K +SKI R++ VRD RF
Sbjct: 245 HTATKFISKITGRQITVRDANRF 267
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 57/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W TLLSACR+H +VE+A++V + ++ + P + G +V+L N
Sbjct: 549 IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMR 608
Query: 195 -----------------------------EALKDLLERME-------QEGYVPDTKEVLL 218
+D+ E++E + GYVPDT+ VL
Sbjct: 609 EMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQ 668
Query: 219 DVEEEQKKNILYYHGERLALVFGII-STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++EE+K LYYH E+LA+ F + S TTIR++KNL K VSKIV R+
Sbjct: 669 DLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRD 728
Query: 278 MIVRDNRRFCRHF 290
+I RD +RF HF
Sbjct: 729 IIARDVKRF-HHF 740
>gi|190612825|gb|ACE80790.1| pentatricopeptide repeat protein [Equisetum telmateia]
Length = 152
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 65/94 (69%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L++ +E+ GYV DTK VL DVEE +KK++LY+H ERLA+ +G++ TP GT +R
Sbjct: 52 IYTELNRLMKEIEEAGYVADTKTVLHDVEESRKKHLLYHHSERLAIAYGLLKTPPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+IKNL +K +SK+ R++I+RD +RF
Sbjct: 112 IIKNLRVCTDCHTASKFISKVTGRKLIMRDAKRF 145
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 108/254 (42%), Gaps = 76/254 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK----IKARHA-----------------PFSRIMH 147
++ +GC G D GL+ F +M+ K + H F + M
Sbjct: 786 AVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP 845
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKD 199
T +W +LL ACRVH+NV + E VA +L IE N G YVIL N + ++
Sbjct: 846 FEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRT 905
Query: 200 LLERMEQEGYV-----------------------------------------------PD 212
+ E M+++ + P+
Sbjct: 906 VRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPE 965
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL DV++EQK+ IL H E+LAL FG+I TP GT +R+IKNL + K +S+
Sbjct: 966 LSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSR 1025
Query: 273 IVHREMIVRDNRRF 286
+ RE+ +RD RF
Sbjct: 1026 VYGREVSLRDKNRF 1039
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EA 196
F + M T VW LL AC++H N EL E A +L ++P N G YV++ N
Sbjct: 779 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERR 838
Query: 197 LKDLLE---RMEQEG--------------------------------------------- 208
KD+ E RM+ G
Sbjct: 839 WKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 898
Query: 209 ---YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YV TK VL + +EE+K +LY H ERLA+ +G+++TP+G ++R+ KNL +
Sbjct: 899 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 958
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K++SK RE+++RD RF HF
Sbjct: 959 FCKLISKFFERELVMRDANRF-HHF 982
>gi|361068225|gb|AEW08424.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165794|gb|AFG65801.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165798|gb|AFG65803.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165808|gb|AFG65808.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165812|gb|AFG65810.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165814|gb|AFG65811.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+ISTP T+I
Sbjct: 49 IYTLLDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSIT 108
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+V RE+I+RD+ RF HF
Sbjct: 109 VTKNLRVCGDCHRATKFISKVVGREIIMRDSNRF-HHF 145
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 119/288 (41%), Gaps = 80/288 (27%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQML-------- 131
S+ G +K E+ A++ + C G ++G K+F M+
Sbjct: 572 SQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPT 631
Query: 132 ------MAKIKARHAPFSRIM--------HAGSTENVWLTLLSACRVHRNVELAEKVADM 177
M + +R + M G+T VW TLL A RVHRNVEL E A+
Sbjct: 632 MKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGAT--VWRTLLGAARVHRNVELGELAAEK 689
Query: 178 ILMI--------------------------------------EP--------NNTGAYVI 191
++ + EP N T +++
Sbjct: 690 LISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLA 749
Query: 192 ---------LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
I L +L R++ GY PDTK V D+E+EQK+ IL +H ERLA+ FG+
Sbjct: 750 GDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGL 809
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
I+TP I+++KNL + K+VS + R ++VRD+ RF HF
Sbjct: 810 IATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRF-HHF 856
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 35/155 (22%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
R VF+ M +RD++ + NS+ AG +NG E + F +M +A +K H F+ +
Sbjct: 249 RDVFDKMEIRDWVTW-------NSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASV 301
Query: 146 MHA-GSTENVWLTLLSACRVHRN-------------------VELAEKVADMILMIEPNN 185
+ + S + L L C+ ++ E+ + ++ LM E N
Sbjct: 302 IKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKN 361
Query: 186 TGAYVILINEALK--------DLLERMEQEGYVPD 212
++ +I+ L+ +L +M +EG P+
Sbjct: 362 VVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPN 396
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 76/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMA-KIKARHAPFSRIM----HAGSTE------------ 152
+ + C G +E +FF M+ A IK ++ ++ H G E
Sbjct: 372 VLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIE 431
Query: 153 ---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------------- 190
+W LL+ C++H+NVEL E ++ +EP + G YV
Sbjct: 432 PDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVR 491
Query: 191 -ILINEALKDLL-------------------------------ERME----QEGYVPDTK 214
++ N LK +L ER+E GYVPD
Sbjct: 492 KLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDII 551
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
V +V++++K+N++ H ERLA+ FG+ISTP GT + V KNL K++S+IV
Sbjct: 552 PVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIV 611
Query: 275 HREMIVRDNRRFCRHFL 291
RE+I+RD R+ HF+
Sbjct: 612 QREIIIRDVNRY-HHFV 627
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 77/254 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN-------------- 153
C G +EG K+F QM ++ IK + + AG+ E+
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399
Query: 154 -VWLTLLSACRVHRNVELAEKVA------------DMILM-------------------- 180
+W LL+AC H N++LAEKV+ D +++
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVM 459
Query: 181 -------------IEPNNT----------GAYVILINEALKDLLERMEQEGYVPDTKEVL 217
IE NN + ++ AL ++++ ++ GYVPDT V+
Sbjct: 460 KDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVV 519
Query: 218 -LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
++ +++K+ L YH E+LA+ FG+++TP GTTIRV+KNL R + K++S I R
Sbjct: 520 HANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGR 579
Query: 277 EMIVRDNRRFCRHF 290
++++RD +RF HF
Sbjct: 580 KVVLRDVQRF-HHF 592
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 77/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVWL------- 156
S+ A C +G +EG+ +F M L + A + AG ++ W
Sbjct: 551 SVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPV 610
Query: 157 --------TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----EALKDLLER- 203
+L ACR+H+NVEL EK AD + ++P++ G +V+L N ++ D + R
Sbjct: 611 KPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARV 670
Query: 204 ---MEQEG-----------------------------------------------YVPDT 213
ME++G YVPDT
Sbjct: 671 RTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDT 730
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ DVEE+ K+ +L H ERLA+ FG+++T GT I + KNL K +S +
Sbjct: 731 NSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLV 789
Query: 274 VHREMIVRDNRRFCRHF 290
RE+IVRD RRF HF
Sbjct: 790 TGREIIVRDLRRF-HHF 805
>gi|224070865|ref|XP_002303271.1| predicted protein [Populus trichocarpa]
gi|222840703|gb|EEE78250.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 194 NEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRV 253
+E LK+L E M+ GYVPDT+ VL D+++E K+ L YH ERLA+ +G+ISTP +R+
Sbjct: 229 DEKLKELRE-MKTGGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARMPLRI 287
Query: 254 IKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IKNL + K++SKIV RE+IVRDN+RF HF
Sbjct: 288 IKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRF-HHF 323
>gi|125563219|gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indica Group]
Length = 410
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G + EI+ V D + D A S N++ AG QN E L+ F + + I+
Sbjct: 201 GKCGRADEIVRVFDESSHMDVA-SCNALVAGLSQNAQVSEALRLFREFVGRGIEL----- 254
Query: 143 SRIMHAGSTENV--WLTLLSAC-RVHRNVELAEKVADMILM-IEPNN----TGAYVILIN 194
NV W ++++ C + R++E + +M IEPN+ + + I
Sbjct: 255 ----------NVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPSHPMMAAIT 304
Query: 195 EALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
E LK L M + G+ P+T VL DVEE++K +IL H E+LA+ G+IST GT +RVI
Sbjct: 305 EKLKHLTMEMRRLGFAPNTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLRVI 364
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL K +S RE+ VRD RF HF
Sbjct: 365 KNLRICGDCHEAMKFISSFERREIYVRDTNRF-HHF 399
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 100/231 (43%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G D+ ++ M PF + VW LL+A RVHR+ EL +
Sbjct: 655 GRAGKLDDAMELVNSM----------PFE------ANAAVWGALLAASRVHRDPELGKLA 698
Query: 175 ADMILMIEPNNTGAYVILINE-------------------------------ALKD---- 199
A+ + ++EP +G +V+L N LKD
Sbjct: 699 AEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHT 758
Query: 200 --------------------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L + M + GYVP+ + L DV++ +K+ +L +H ERLA+
Sbjct: 759 FIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVA 818
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
F +ISTP G IRV KNL R K +SKIV RE+I+RD RF HF
Sbjct: 819 FALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRF-HHF 868
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 89/184 (48%), Gaps = 55/184 (29%)
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK---DLLER-- 203
LL C++HRN ELAE V ++ +EP N+G YV+L N +A K D+ E+
Sbjct: 495 LLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGV 554
Query: 204 --------MEQEG---------------------------------YVPDTKEVLLDVEE 222
+E EG Y P T+ V+ DVE+
Sbjct: 555 EKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVED 614
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
E+K++ L +H E+LA+ F ++ T G TIRV KNL K++S+I HRE+IVRD
Sbjct: 615 EEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRD 674
Query: 283 NRRF 286
N RF
Sbjct: 675 NNRF 678
>gi|383164857|gb|AFG65224.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 68/94 (72%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L+ L E++++ GY+PDT VL D+EEE K+++L YH E+LA+ FGIISTP G++IR
Sbjct: 42 IYKTLESLTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL + + K +S+I RE+I+RD RF
Sbjct: 102 IVKNLRACGDCHNAIKFISRISSREIILRDVSRF 135
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 118/291 (40%), Gaps = 83/291 (28%)
Query: 60 SSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGC----- 114
SSG + ++ F G + S SG V++ FEI C Y + C
Sbjct: 429 SSGVQPDEVTFIGVLSAC--SYSGKVKEGFEIFEAMK----CTYQVEPGIEHYACMVDLL 482
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE ++ +M M VW LL ACR H ++LAE
Sbjct: 483 GRAGRVDEAMELVEKMPME----------------PDAIVWGALLGACRNHMKLDLAEVA 526
Query: 175 ADMILMIEPNNTGAYVIL-------------------IN--------------------- 194
+ + +EP N G YV+L IN
Sbjct: 527 VEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVIKFPGCSWIEVEKKVHMF 586
Query: 195 -----------EALKDLLERME----QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
+ +LE++ + GY PD VL DV+EE+K + L YH ERLA+
Sbjct: 587 TGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVA 646
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+G++ P+G IRV+KNL K+++K+ RE+I+RD RF HF
Sbjct: 647 YGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRF-HHF 696
>gi|357139595|ref|XP_003571366.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Brachypodium distachyon]
Length = 674
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 72/233 (30%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
GQ G DE R APF+ T N+W LL+ACR+H+N++LA
Sbjct: 450 GQQGLLDEAYSMI----------RKAPFT------PTANMWGALLTACRIHKNIQLARLA 493
Query: 175 ADMILMIEPNNTGAYVILIN---------EALK--------------------------- 198
A+ +L +EP Y++L+N EALK
Sbjct: 494 AEQLLAMEPQKVNNYIVLLNLYISSGRQDEALKVVNTLNGAGLCMSNACSWITVKKKDHR 553
Query: 199 -------------------DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L+E +++ GYV + E+L D+ ++ K YH ERLA+
Sbjct: 554 FFFKDSLHPKSSEIYRKLHTLMEALKELGYVAEEDELLPDILPDELKTSKAYHSERLAVA 613
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLL 292
FGIIST T + + ++ R K+V+++ RE+++RD RF HF L
Sbjct: 614 FGIISTSPSTPLTINQSHRLCRDCHKVMKLVAQVTKREIVLRDGSRF-HHFKL 665
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI---- 145
I+ + C G D+GL+ F M M + R FS
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL----------- 192
M VW LL ACR+H N +LAE+V ++L +EP N+G YV+L
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFD 514
Query: 193 ----INEALKD-----------------LLERMEQEGYVPDTKE---------------- 215
I + +KD + E +G P KE
Sbjct: 515 DVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAG 574
Query: 216 -------VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
VL D++EE+K+ + YH E+LA+ FG+I+T G I ++KNL K
Sbjct: 575 HSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATK 634
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++S+I RE+IVRD R+ HF
Sbjct: 635 LISQIFDREIIVRDRVRY-HHF 655
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS--RI--- 145
I+ ++ C G ++G +F ML M + R FS RI
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M + VW LL+ CR+H N++L + A+ + + P N G YV+L N
Sbjct: 587 SMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWND 646
Query: 195 -----EALKDLLER---------------------------------MEQEG-------Y 209
+ ++D R +EQ G Y
Sbjct: 647 VAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGY 706
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
+PDTK VL D+E EQK++ L H E+LA+ FGI+ P T+RV KN+ + K
Sbjct: 707 IPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKF 766
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD +RF HF
Sbjct: 767 MSKVARREIIVRDRKRF-HHF 786
>gi|357501237|ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 37/195 (18%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAE 172
GC GP DE +F M + AG +VW TL + R++ ++E +
Sbjct: 246 GCA--GPLDEAQEFIENM--------------PIEAGV--DVWETLRNFARIYGDLERED 287
Query: 173 KVADMILMIEPNNTGAYVILINEALK----DLLE-------------RMEQEGYVPDTKE 215
+ A ++ + +P+ A + + + K ++LE ++ + GYVPDT+
Sbjct: 288 R-AKLLTVRDPSKAAADKMPLPQRKKQSAINMLEEKNRVSEYRCLTGQIREAGYVPDTRY 346
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D++EE+K+ L YH ERLA+ +G+ISTP T +R+IKNL + K +SKIV
Sbjct: 347 VLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVG 406
Query: 276 REMIVRDNRRFCRHF 290
++IVRDN+RF HF
Sbjct: 407 MKLIVRDNKRF-HHF 420
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 91/202 (45%), Gaps = 56/202 (27%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE-------- 195
R M VW LL++C+ H NVELAE + ++ +EP+++G YVIL N
Sbjct: 420 RQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWE 479
Query: 196 -------------------------------------------ALKDLLERME----QEG 208
A+ L+R+E + G
Sbjct: 480 GVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAG 539
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPDT V DVEE++K +++ H ERLA+ FG+IST GT + + KNL K
Sbjct: 540 YVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAIK 599
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+SKI RE+ VRD R+ HF
Sbjct: 600 FISKITEREITVRDVNRY-HHF 620
>gi|388458812|gb|AFK31272.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 294
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L+N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLVNLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|357501047|ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 37/195 (18%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAE 172
GC GP DE +F M + AG +VW TL + R++ ++E +
Sbjct: 246 GCA--GPLDEAQEFIENM--------------PIEAGV--DVWETLRNFARIYGDLERED 287
Query: 173 KVADMILMIEPNNTGAYVILINEALK----DLLE-------------RMEQEGYVPDTKE 215
+ A ++ + +P+ A + + + K ++LE ++ + GYVPDT+
Sbjct: 288 R-AKLLTVRDPSKAAADKMPLPQRKKQSAINMLEEKNRVSEYRCLTGQIREAGYVPDTRY 346
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D++EE+K+ L YH ERLA+ +G+ISTP T +R+IKNL + K +SKIV
Sbjct: 347 VLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVG 406
Query: 276 REMIVRDNRRFCRHF 290
++IVRDN+RF HF
Sbjct: 407 MKLIVRDNKRF-HHF 420
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 103/256 (40%), Gaps = 75/256 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-------------LMAKIKARHAP------FSRIMHAG 149
S+ A C G DEG F M M + R +R M
Sbjct: 412 SVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPME 471
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPN------------------------- 184
E VW +LLSACRV+ ++ +A AD + + P
Sbjct: 472 PNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVR 531
Query: 185 -------------------NTGAYVIL-----------INEALKDLLERMEQEGYVPDTK 214
N Y L I +AL L+ RM++ GY+P+T
Sbjct: 532 SIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETD 591
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
L DVEEE K+ L H E+LA+VF I++T G+TIR+ KN+ K++SKI
Sbjct: 592 SALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIA 651
Query: 275 HREMIVRDNRRFCRHF 290
RE+I+RD RF HF
Sbjct: 652 EREIIIRDTHRF-HHF 666
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 81/278 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM--------------LMA 133
AVR F + I+ N ++ C G +EG K+F M M
Sbjct: 721 AVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMV 780
Query: 134 KIKARHAPFSRI---MHAGSTE---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R + I +H + +VW + LS+CRVH+N+E+ V +L +EP + G
Sbjct: 781 DLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAG 840
Query: 188 ------------------------------------AYVILINEA--------------- 196
+++ L N+
Sbjct: 841 PYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTK 900
Query: 197 ----LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
L +L+ R+++ GY D V+ DVE+EQ++ +L YH E+LA+ +GIIST GT IR
Sbjct: 901 IYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIR 960
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL + K S+++ RE+I+RD RF HF
Sbjct: 961 VMKNLRVCIDCHNFIKYASELLGREIIIRDIHRF-HHF 997
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 87/267 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS-------------T 151
I+ ++ + C G D+GL+ + M K + R+ H G
Sbjct: 353 ITLTAVLSACSHGGLVDKGLEIYENM-----KRDYGIEPRLEHYGCIVDMLGRAGKLAEA 407
Query: 152 ENVWL------------TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
EN L LL AC++++N E+AE+V +M++ ++P ++G YV+L N
Sbjct: 408 ENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACA 467
Query: 195 ------EALKDLLE-------------------------------------RMEQE---- 207
E+L+D+++ R+ +E
Sbjct: 468 GQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGK 527
Query: 208 ----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
GY +T + DV+EE+K+ ++ H E+LA+ +G++ T GTTIR++KNL
Sbjct: 528 IRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDC 587
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
K++S++ RE IVRD RF HF
Sbjct: 588 HTATKLISEVYGREFIVRDRNRF-HHF 613
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 102/254 (40%), Gaps = 76/254 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHA 148
S+ C +G ++G F +M M + R A F R M
Sbjct: 344 SLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPI 403
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+W TLL AC +H N+ELAE V + ++PNN+G +V+L N
Sbjct: 404 LPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGI 463
Query: 195 --------------------------------------EALKDLLERM----EQEGYVPD 212
EA L E M E+EGY P
Sbjct: 464 RRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQ 523
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
+ VL DVEEE+K++ + H E+LA FGI P G +R++KNL K++SK
Sbjct: 524 VRSVLHDVEEEEKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISK 583
Query: 273 IVHREMIVRDNRRF 286
+ E+IVRD RF
Sbjct: 584 VYQVEIIVRDRSRF 597
>gi|357158917|ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 547
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 70/284 (24%)
Query: 59 SSSGGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNG 118
+S R VD ++ + G + +G + E+ + + I+ NS+ C G
Sbjct: 264 NSCAMRSVDT-WNAMITGF--TANGCSERALELFTRMESTGFVPNKITFNSVLNACSHGG 320
Query: 119 PFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMI 178
+EGL +++M ++M +VW L+ ACR ++N +L +K +
Sbjct: 321 FVEEGLFEKAEVIM-----------QMMPMEPDASVWKALVGACRTYKNFKLGKKAGRRL 369
Query: 179 LMIEPNNTGAYVILIN--------EALKDLLERMEQEG---------------------- 208
+ PN+ YV+L N + + ++ +RM G
Sbjct: 370 IEAAPNDHTGYVLLSNIYALDGNWKGVHNVRKRMFDSGVQKVPGSSSIEVDGVIHEFISG 429
Query: 209 -------------------------YVPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGI 242
Y PDT +VLLD+++E K++ L H E+LA+ FG+
Sbjct: 430 DKSHSRKKDVYEMLGEICQQLKIAGYAPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGL 489
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
IST GT IRV+KNL + K++SKI R +IVRD RF
Sbjct: 490 ISTAPGTPIRVVKNLRVCGDCHNAIKLLSKIYGRSIIVRDANRF 533
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 118/305 (38%), Gaps = 91/305 (29%)
Query: 71 DGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLK 125
DG V +G + F A+ F + + +S N +T + C G EGLK
Sbjct: 414 DGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK 473
Query: 126 FFGQMLMAKIKARHAPFSRIMH----------AGSTEN---------------VWLTLLS 160
F M K H R+ H +G E V T L
Sbjct: 474 HFKSM-----KVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLG 528
Query: 161 ACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------EALKDLLER----- 203
ACRVH N++L + A+MIL +P++ AY++L N E K + ER
Sbjct: 529 ACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKE 588
Query: 204 --------------------------------------MEQEGYVPDTKEVLLDVEEEQK 225
+++ GY+P T VL DVEEEQK
Sbjct: 589 AGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQK 648
Query: 226 KNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
+ L+ H E++A+ +G IST IRV KNL K S + +E+++RD R
Sbjct: 649 EQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANR 708
Query: 286 FCRHF 290
F HF
Sbjct: 709 F-HHF 712
>gi|297746380|emb|CBI16436.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 79/261 (30%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS----------------- 150
N++ G +G E + F QM + K+ F +++A S
Sbjct: 275 NAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGREAEETVFN 334
Query: 151 -----TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
+W LL ACR+H+++E +++ +I ++ ++ G +V+L N +
Sbjct: 335 MPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEA 394
Query: 198 KDLLERMEQEG-----------------------------------------------YV 210
K + +++E G YV
Sbjct: 395 KAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYV 454
Query: 211 PDTKEVLLDV-EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+ EVLLD+ +EE K+ L H E+LA+ FG+I+TP GT IR++KNL K
Sbjct: 455 PEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKF 514
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD R+ HF
Sbjct: 515 ISKVYKREIIVRDRIRY-HHF 534
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ C G EGL+ F M ++ + A +S I M
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN------------------------ 184
+V+ TLL ACR+H N++L +++ I +EPN
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMT 550
Query: 185 --------------------NTGAYVILINEA-----------LKDLLERMEQEGYVPDT 213
N Y + E LK L+ ++++ GYVP+T
Sbjct: 551 RASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNT 610
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+L DV ++ KK+ILY+H E++A+ FG++ T GT IR+ KNL + +K VSK+
Sbjct: 611 NVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKV 670
Query: 274 VHREMIVRDNRRF 286
R ++++D RF
Sbjct: 671 FGRVLVIKDANRF 683
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 55/185 (29%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK---DLLER- 203
LL C++HRN ELAE V ++ +EP N+G YV+L N +A K D+ E+
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKG 506
Query: 204 ---------MEQEG---------------------------------YVPDTKEVLLDVE 221
+E EG Y P T+ V+ DVE
Sbjct: 507 VEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVE 566
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
+E+K++ L +H E+LA+ F ++ T G TIRV KNL K++S+I HRE+IVR
Sbjct: 567 DEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVR 626
Query: 282 DNRRF 286
DN RF
Sbjct: 627 DNNRF 631
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ + C +G D+G ++F M ++ KI+ + AG +
Sbjct: 222 LLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPID 281
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMIL------------------------------ 179
VW TL++ACR H ++L EK+ ++
Sbjct: 282 PNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIR 341
Query: 180 ---------------MIEPNN----------TGAYVILINEALKDLLERMEQEGYVPDTK 214
MIE +N + A I E + ++ + M++ GY+P T
Sbjct: 342 EAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTT 401
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLLD+++E K++ L H E+LA+ F +++TP GT IR++KNL +K +SKI
Sbjct: 402 EVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIY 461
Query: 275 HREMIVRDNRRFCRHF 290
+RE++VRD RF HF
Sbjct: 462 NREIVVRDRNRF-HHF 476
>gi|361066847|gb|AEW07735.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164845|gb|AFG65218.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164849|gb|AFG65220.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164851|gb|AFG65221.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164853|gb|AFG65222.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164855|gb|AFG65223.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164859|gb|AFG65225.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164861|gb|AFG65226.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164863|gb|AFG65227.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164865|gb|AFG65228.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164867|gb|AFG65229.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 67/94 (71%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L E++++ GY+PDT VL D+EEE K+++L YH E+LA+ FGIISTP G++IR
Sbjct: 42 IYTTLESLTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL + + K +S+I RE+I+RD RF
Sbjct: 102 IVKNLRACGDCHNAIKFISRISSREIILRDVSRF 135
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 104/261 (39%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHA-- 148
I+ S+ C G DE ++F M M + R M
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666
Query: 149 ----GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE--------- 195
+ VW LL+A RVHR+ EL A+ + ++EP +G +V+L N
Sbjct: 667 SMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDD 726
Query: 196 ----------------------ALKD------------------------LLERMEQEGY 209
LKD L + M + GY
Sbjct: 727 VAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGY 786
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP+ + L DV++ +K+ +L +H ERLA+ F +ISTP G IRV KNL R K
Sbjct: 787 VPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKF 846
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S IV RE+I+RD RF HF
Sbjct: 847 ISDIVSREIIIRDINRF-HHF 866
>gi|383164847|gb|AFG65219.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164871|gb|AFG65231.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164873|gb|AFG65232.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164875|gb|AFG65233.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 67/94 (71%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L E++++ GY+PDT VL D+EEE K+++L YH E+LA+ FGIISTP G++IR
Sbjct: 42 IYTTLESLTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL + + K +S+I RE+I+RD RF
Sbjct: 102 IVKNLRACGDCHNAIKFISRISSREIILRDVSRF 135
>gi|358357226|gb|AEU08453.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L M++EGY+PDT+ +L DV+++ K+ L +H E+LA+ FG+ISTP GT IR
Sbjct: 52 IYAELEKLTSHMKEEGYIPDTRFILHDVDQQTKEQALCHHSEKLAICFGLISTPPGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL +K +SKIV RE+I RD RF HF
Sbjct: 112 IVKNLRICGDCHTASKFISKIVAREIIARDGSRF-HHF 148
>gi|297736881|emb|CBI26082.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 24/158 (15%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNT--------GAYVIL------------I 193
+W TLLSA R++ V++A + + +IE N AYV +
Sbjct: 403 LWGTLLSASRLYGRVDIAVEASKW--LIESNQQVAAAYIRDSAYVFYAGDVSLCARGSEV 460
Query: 194 NEALKDLLERMEQEGYVPDTKEVL-LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
L++L RM++ GYV ++ ++ +DVEEE K+ I+ H ERLAL FG+IS P G TIR
Sbjct: 461 ASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTIR 520
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL R K++S+IV R+ +VRD RF HF
Sbjct: 521 VMKNLRMCRDCHEAFKLISEIVERDFVVRDVNRF-HHF 557
>gi|383164843|gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 67/94 (71%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L E++++ GY+PDT VL D+EEE K+++L YH E+LA+ FGIISTP G++IR
Sbjct: 42 IYTTLESLTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL + + K +S+I RE+I+RD RF
Sbjct: 102 IVKNLRACGDCHNAIKFISRISSREIILRDVSRF 135
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 107/253 (42%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTENV---------- 154
++ C G DEG + F M IK + + + AG+ E
Sbjct: 320 AVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPME 379
Query: 155 -----WLTLLSACRVHRNVELAEKVADMILMIEP-------------------------- 183
W L+S+C++H ++ + E+V ++ +EP
Sbjct: 380 PHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIR 439
Query: 184 ---------NNTGAYVILIN--------------------EALKDLLERMEQEGYVPDTK 214
TG I +N L+D+ R++ GYV DT
Sbjct: 440 QMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRKIYALLEDIERRLQLIGYVKDTS 499
Query: 215 EVLLDVEEEQKKNI-LYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+V++D+++E+ K I L YH ERLAL FGI++ P G IR++KNL R +K+VSK+
Sbjct: 500 QVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPIRIVKNLRVCRDCHVHSKLVSKL 559
Query: 274 VHREMIVRDNRRF 286
RE+IVRD RF
Sbjct: 560 YEREIIVRDRHRF 572
>gi|190612767|gb|ACE80761.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I LK L ++M + GYVPDT+ VL DV EE+K+ LY+H E+LA+ FG+++TP GT
Sbjct: 49 IVEIRAELKKLFKKMREVGYVPDTRFVLRDVTEEEKETQLYHHSEKLAIAFGLMNTPPGT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+R+ K+L K +SKIV R +IVRD RF HF
Sbjct: 109 PLRIFKSLRVCGDCHTATKFISKIVQRVIIVRDGSRF-HHF 148
>gi|383164869|gb|AFG65230.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 67/94 (71%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L E++++ GY+PDT VL D+EEE K+++L YH E+LA+ FGIISTP G++IR
Sbjct: 42 IYTTLESLAEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL + + K +S+I RE+I+RD RF
Sbjct: 102 IVKNLRACGDCHNAIKFISRISSREIILRDVSRF 135
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 119/314 (37%), Gaps = 118/314 (37%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
KVF+ M ++D I+ ++ G QNG E L F+ M+ + +K F ++
Sbjct: 124 KVFDSMEIQD-------VITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLL 176
Query: 147 ----HAGSTEN------------------------------------------------- 153
HAG E+
Sbjct: 177 FACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPD 236
Query: 154 --VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK---- 198
VW LL+ACRVH NVEL E+ A+ + +EP N YV+L N EA K
Sbjct: 237 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 296
Query: 199 ------------------------------------------DLLERMEQEGYVPDTKEV 216
+++ +++ GYVPD
Sbjct: 297 MKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFA 356
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D++EE K+ L YH E+LA+ FG+++ P G IR+ KNL K VS + HR
Sbjct: 357 LHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHR 416
Query: 277 EMIVRDNRRFCRHF 290
+I+RD+ F HF
Sbjct: 417 HVILRDSNCF-HHF 429
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALK 198
V+ + L+AC++H+N++L E A L +EP+ +G V++ I A+K
Sbjct: 600 VFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMK 659
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D + E++E GY PD VL
Sbjct: 660 DEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLH 719
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++++E+K + L YH E+LA+ +G+IST G IR++KNL + K++SKI RE+
Sbjct: 720 NIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREI 779
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 780 IVRDRNRF-HHF 790
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 86/266 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN----------- 153
I+ + C G +EG ++F +M K ++ RI H G +
Sbjct: 210 ITFVGVLYACSHCGIVNEGFEYFKRM-----KEQYDIVPRIEHYGCMVDLLGRAGLLKEA 264
Query: 154 --------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
+W TLL AC +H ++ L +L +EP ++G YV+L N
Sbjct: 265 YDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGDYVLLSNLYASE 324
Query: 195 ----------------------------------------------EALKDLLERMEQE- 207
EA+ +L M +
Sbjct: 325 QRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAIYKMLVEMAMKL 384
Query: 208 ---GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
GYVP T VL D+EEE+K++ L+YH E++A+ F +I+T GT IR+IKNL
Sbjct: 385 KLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRIIKNLRVCADCH 444
Query: 265 HGNKVVSKIVHREMIVRDNRRFCRHF 290
K++SK+ R+++VRD RF HF
Sbjct: 445 FAIKLISKVFERDIVVRDCSRF-HHF 469
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 108/254 (42%), Gaps = 63/254 (24%)
Query: 98 LEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLT 157
L+ D+ + S G + L GQ+ A + + PF T +W +
Sbjct: 359 LDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQ------PTRAIWGS 412
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTG------------------------------ 187
LL ACRVH NV + E VA + IEP N G
Sbjct: 413 LLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLKKTV 472
Query: 188 ------AYVIL-------------------INEALKDLLERMEQEGYVPDTKEVLLDVEE 222
+++IL IN + ++ ++ G+VPD VL DV++
Sbjct: 473 IKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDVDD 532
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
EQK+ +L H E+LA+ FG++STP TI+V+KNL + K VSK+ RE+ +RD
Sbjct: 533 EQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRD 592
Query: 283 NRRFCRHFLLFRAC 296
RF H + AC
Sbjct: 593 KNRF--HLITEGAC 604
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 109/261 (41%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
I+ S+ A C G +EG +F M L+ + F I
Sbjct: 465 ITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIK 524
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN-------------------- 184
M VW LL ACR+H+NV+L E A + ++P
Sbjct: 525 GMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWED 584
Query: 185 ---------NTG---------------AYVIL-----------INEALKDLLERMEQEGY 209
N+G +V L I E L+ L ++++ GY
Sbjct: 585 VERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 644
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD VL DV E+K+ +L H E+LA+ FGI++T GTTI +IKNL K
Sbjct: 645 VPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKF 704
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE++VRD++RF HF
Sbjct: 705 ISKIVDREIVVRDSKRF-HHF 724
>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
Length = 948
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
++++GY+PDT+ VL DV E++K+ +L+YH ERLA+ +G ++TP G +RVIKNL
Sbjct: 851 IKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDC 910
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
+K+ +K++ RE+IVRDNRRF HF
Sbjct: 911 HTASKLYAKVMQREIIVRDNRRF-HHF 936
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 56/191 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
W+T L+ACR+H +EL E A+ + ++P++T Y+ + N E + + ++ME
Sbjct: 615 AWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674
Query: 206 QE-----------------------------------------------GYVPDTKEVLL 218
+ GYVPDTK VL
Sbjct: 675 ERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLH 734
Query: 219 DVEEEQKKNILYYHGERLALVFGIIST-PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV E +K+ +L YH E++A+ FG++S+ G IRV+KNL K +++I R+
Sbjct: 735 DVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRD 794
Query: 278 MIVRDNRRFCR 288
+I+RD RF R
Sbjct: 795 IILRDCNRFHR 805
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 201 LERME----QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
LER++ + GYVPDT+ VL DVEEEQK+ +L+YH E+LA+ FG+IS P +IRVIKN
Sbjct: 812 LERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKN 871
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K ++++ RE+ VRD RF HF
Sbjct: 872 LRVCKDCHTATKFIARVTQREIAVRDCNRF-HHF 904
>gi|383165800|gb|AFG65804.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165802|gb|AFG65805.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165820|gb|AFG65814.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+ISTP T+I
Sbjct: 49 IYTLLDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSIT 108
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+V RE+I+RD RF HF
Sbjct: 109 VTKNLRVCGDCHRATKFISKVVGREIIMRDANRF-HHF 145
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 77/258 (29%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHA------PFSRIMH 147
N +TA C G +EG ++F QM+ M + R F M
Sbjct: 380 NLLTA-CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKD 199
+ +W LL ACR+ NVE+ ++VA++++ + P+++GAYV L N + +
Sbjct: 439 IKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 200 LLERMEQ--------------EGYV----------PDTKE-------------------- 215
+ RM++ +G + P KE
Sbjct: 499 MRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPI 558
Query: 216 ---VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VLL++EEE K+N+L+YH E++A FG+IST G IR++KNL K++SK
Sbjct: 559 TTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISK 618
Query: 273 IVHREMIVRDNRRFCRHF 290
+ R++ VRD +RF HF
Sbjct: 619 VYKRKITVRDRKRF-HHF 635
>gi|383165810|gb|AFG65809.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+ISTP T+I
Sbjct: 49 IYTLLDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAISFGLISTPPWTSIT 108
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+V RE+I+RD+ RF HF
Sbjct: 109 VTKNLRVCGDCHRATKFISKVVGREIIMRDSNRF-HHF 145
>gi|383165804|gb|AFG65806.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165806|gb|AFG65807.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+ISTP T+I
Sbjct: 49 IYTLLDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSIT 108
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+V RE+I+RD+ RF HF
Sbjct: 109 VTKNLRVCGDCHRTTKFISKVVGREIIMRDSNRF-HHF 145
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 106/258 (41%), Gaps = 74/258 (28%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA-------------------RHAPFSRI 145
IS + C +G DEGL +F M K++ R F R
Sbjct: 392 ISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE 451
Query: 146 MHAGSTENVWLTLLSACRVHRNVELA---------------------------------- 171
M T VW LL ACR+H+N+EL
Sbjct: 452 MPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDV 511
Query: 172 EKVADMI---------------------LMIEPNNTGAYVILINEALKDLLERMEQEGYV 210
KV M+ L + + T + I +++ ++++ GYV
Sbjct: 512 AKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYV 571
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
PDT VLL V++++++ L YH E+LAL F +++TP G+ IR+ KN+ K V
Sbjct: 572 PDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFV 631
Query: 271 SKIVHREMIVRDNRRFCR 288
SK+V RE+IVRD RF R
Sbjct: 632 SKVVDREIIVRDTNRFHR 649
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 56/189 (29%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
LL AC++H N+E+ E++A +++ P+++G+YV L N
Sbjct: 431 ALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELD 490
Query: 195 -----------------------------EALKDLLE----RMEQEGYVPDTKEVLLDVE 221
E + +LE R+ GY P+T +VLL+++
Sbjct: 491 IRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMD 550
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E++K++ L+YH E++A+ FG+IST T ++++KNL K+VSKI +R++IVR
Sbjct: 551 EKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVR 610
Query: 282 DNRRFCRHF 290
D +RF HF
Sbjct: 611 DRKRF-HHF 618
>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
Length = 948
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
++++GY+PDT+ VL DV E++K+ +L+YH ERLA+ +G ++TP G +RVIKNL
Sbjct: 851 IKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDC 910
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
+K+ +K++ RE+IVRDNRRF HF
Sbjct: 911 HTASKLYAKVMQREIIVRDNRRF-HHF 936
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 102/253 (40%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAGSTE 152
C G DEG +FF M M + R F M
Sbjct: 659 ACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDT 718
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERM 204
+W LL AC++H+N E+ + A+ + EP+N G YV+L N + +L + M
Sbjct: 719 VIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIM 778
Query: 205 EQEG-----------------------------------------------YVPDTKEVL 217
+Q G YVPDT+ VL
Sbjct: 779 KQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVL 838
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++EEQK++ L YH E+LA+ +G++ TP G I+++KNL K VS + R+
Sbjct: 839 HDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRD 898
Query: 278 MIVRDNRRFCRHF 290
+ +RD RF HF
Sbjct: 899 IDIRDGNRF-HHF 910
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 109/261 (41%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
I+ S+ A C G +EG +F M L+ + F I
Sbjct: 311 ITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIK 370
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN-------------------- 184
M VW LL ACR+H+NV+L E A + ++P
Sbjct: 371 GMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWED 430
Query: 185 ---------NTG---------------AYVIL-----------INEALKDLLERMEQEGY 209
N+G +V L I E L+ L ++++ GY
Sbjct: 431 VERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 490
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD VL DV E+K+ +L H E+LA+ FGI++T GTTI +IKNL K
Sbjct: 491 VPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKF 550
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE++VRD++RF HF
Sbjct: 551 ISKIVDREIVVRDSKRF-HHF 570
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 15/230 (6%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
H+ VD L SR+G +++ ++++ F A ++ C G + G +
Sbjct: 740 HYSCLVDAL--SRAGHIQEAEKVVSSMPFEAS---ATMYRTLLNACRVQGDKETGERV-A 793
Query: 129 QMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVA----DMI----LM 180
+ L + A + + + + N W +SA + + V + ++ DM L
Sbjct: 794 EKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLF 853
Query: 181 IEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVF 240
+ + + LI ++ +++R+++EGYVPDT+ L+D+EEE K++ L YH E+LA+ +
Sbjct: 854 VAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAY 913
Query: 241 GIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
G++ TP TT+RVIKNL + K +S + RE+++RD RF HF
Sbjct: 914 GLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRF-HHF 962
>gi|358357194|gb|AEU08437.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I+ LK L +M++ GYVPD + VL DVEEEQK+ LY+H E+LA+ FG+IST GT
Sbjct: 49 IVEIHAELKRLSGQMKEAGYVPDLRFVLHDVEEEQKEFSLYHHSEKLAIAFGLISTAPGT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+RVIKNL K +SKIV R ++VRD RF
Sbjct: 109 PLRVIKNLRVCGDCHTATKFISKIVGRAIVVRDANRF 145
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ + C +G + G ++F +M ++ KI+ + AG
Sbjct: 318 LLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIE 377
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL----------------- 192
+W TL+SACRVH ++L E ++ ++ EP + YV+L
Sbjct: 378 PNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIR 437
Query: 193 -----------------------------------INEALK---DLLERMEQEGYVPDTK 214
NE +K ++ M++ GY P T
Sbjct: 438 VAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTT 497
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EV LD++EE K++ L H E+LA+ F +++TP G+ IR+ KNL +K +SKI
Sbjct: 498 EVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIY 557
Query: 275 HREMIVRDNRRFCRHF 290
+RE+++RD RF HF
Sbjct: 558 NREIVMRDRSRF-HHF 572
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI---- 145
I+ + C G D+GL+ F M M + R FS
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALK----D 199
M VW LL ACR+H N +LAE+V ++L +EP N+G YV+L N K D
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFD 514
Query: 200 LLERMEQ----------------------------EGYVPDTKE---------------- 215
+ ++ + +G P KE
Sbjct: 515 DVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAG 574
Query: 216 -------VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
VL D++EE+K+ + YH E+LA+ FG+I+T G I ++KNL K
Sbjct: 575 HSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATK 634
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++S+I RE+IVRD R+ HF
Sbjct: 635 LISQIFDREIIVRDRVRY-HHF 655
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 103/252 (40%), Gaps = 75/252 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAG 149
+ GC G D+G +F M M + AR M
Sbjct: 413 LLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK-- 198
+ VW +LL CR+HR +LAE V ++ +EP N+G YV+L N EA K
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIR 532
Query: 199 -------------------------------------DLLERME-------QEGYVPDTK 214
+ E++E + GY P T+
Sbjct: 533 STVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTE 592
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DVEEE+K++ L H E+LA+ F +IST IRV+KNL K +SK+
Sbjct: 593 FVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVT 652
Query: 275 HREMIVRDNRRF 286
RE+++RDN RF
Sbjct: 653 GREIVIRDNNRF 664
>gi|302756353|ref|XP_002961600.1| hypothetical protein SELMODRAFT_76411 [Selaginella moellendorffii]
gi|300170259|gb|EFJ36860.1| hypothetical protein SELMODRAFT_76411 [Selaginella moellendorffii]
Length = 390
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L E + ++GYVPDT+EVL DV EEQK+ +L H E+LA+ FG+IST GTTIR
Sbjct: 283 IRRELGRLHELVVKQGYVPDTREVLHDVCEEQKRRLLLNHSEKLAIAFGVISTAPGTTIR 342
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SK+ R+++VRD RF HF
Sbjct: 343 ILKNLRVCSDCHAAAKLMSKVTRRKIVVRDCHRF-HHF 379
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 77/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI 145
+I+ +I + C +G +EG +F QM L+ + ++ I
Sbjct: 403 SIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNII 462
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
M E VW LLS+CRV+ N+++ AD +L + P +G YV+L N
Sbjct: 463 KQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWT 522
Query: 195 --EALKDLLER--------------------------------------------MEQEG 208
A++ L++R M++ G
Sbjct: 523 EVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELG 582
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVP T L DVEEE K+ L H E+LA+VF I++T + + IR+ KNL K
Sbjct: 583 YVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIAAK 641
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKIV RE+++RD RF HF
Sbjct: 642 LISKIVQREIVIRDTNRF-HHF 662
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 101/261 (38%), Gaps = 86/261 (32%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGS------------------- 150
+ + C G DEGL+ F +M K H I H G
Sbjct: 294 VLSACNHAGLVDEGLQCFNRM-----KLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIR 348
Query: 151 ------TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
E VW LLSAC+ H N+E+ E A + + +N G YV+L N
Sbjct: 349 SMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWED 408
Query: 195 -----------------------------------------EALKDLLERMEQ----EGY 209
+ + +++ +ME EGY
Sbjct: 409 VAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGY 468
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
PDT +VL DV+EE+K+ L H ++LA+ F +I T G IR+ +NL K+
Sbjct: 469 SPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKL 528
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S I RE+ VRD RF HF
Sbjct: 529 ISVIYQREITVRDRNRF-HHF 548
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ A C G DEG ++ M L+ + +S I M
Sbjct: 262 SVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKV 321
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---EA--LKDL--- 200
+W LLSACR+H+NVELAE + ++ +N+G YV+L N EA KD+
Sbjct: 322 KPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERI 381
Query: 201 -------------------------------------------LERM----EQEGYVPDT 213
LE++ ++ GYVP+T
Sbjct: 382 RLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNT 441
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D++EE+K++ L H E+LA+ F ++++ + I +IKNL K ++KI
Sbjct: 442 GSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKI 501
Query: 274 VHREMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 502 TEREIIIRDLQRF-HHF 517
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 77/254 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN-------------- 153
C G +EG K+F QM ++ IK + + AG+ E+
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTP 399
Query: 154 -VWLTLLSACRVHRNVELAEKVA------------DMILM-------------------- 180
+W LL+AC H N++LAEKV+ D +++
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVM 459
Query: 181 -------------IEPNNT----------GAYVILINEALKDLLERMEQEGYVPDTKEVL 217
IE NN + ++ AL ++++ ++ GYVPDT V+
Sbjct: 460 KDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVV 519
Query: 218 -LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
++ +++K+ L YH E+LA+ FG+++TP GTTIRV+KNL R + K++S I R
Sbjct: 520 HANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGR 579
Query: 277 EMIVRDNRRFCRHF 290
+++ RD +RF HF
Sbjct: 580 KVVXRDVQRF-HHF 592
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 105/257 (40%), Gaps = 78/257 (30%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKI----------------KARHAPFSRIMHA 148
+ C G DEG +F +M ++ KI K H F + M
Sbjct: 348 VLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE-FIQNMPM 406
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
VW TLL AC +H ++ L E +L +EP ++G YV+L N
Sbjct: 407 QPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKV 466
Query: 195 --------------EALKDLLERMEQ---------------------------EGYVPDT 213
+L +L R+ + EGYVP
Sbjct: 467 RRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHI 526
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D+EEE+K+ L YH E++A+ F +I+T G IRV+KNL K++SK+
Sbjct: 527 SNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKV 586
Query: 274 VHREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 587 FDREIVVRDRSRF-HHF 602
>gi|296085509|emb|CBI29241.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 56/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL AC++H NVE+ ++VA+ ++ + P+++G+YV L N
Sbjct: 313 IWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMK 372
Query: 195 --------------------------------EALKDLLERMEQE----GYVPDTKEVLL 218
+ + +L+ M + GY P+T +VL
Sbjct: 373 EMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLT 432
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+++EE K++ L YH E++A+ FG+IST T +R+ KNL K++SKI R++
Sbjct: 433 NMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKI 492
Query: 279 IVRDNRRFCRHFL 291
IVRD +RF HF+
Sbjct: 493 IVRDRKRF-HHFV 504
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 122/296 (41%), Gaps = 93/296 (31%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAG-------CGQNGPFDEGLKFFGQ 129
++ GS+ R VF++M +D +S N++ +G C G D+G +F
Sbjct: 489 AKCGSIKDARLVFDLMNKQD-------EVSWNAMISGYSMHGLACANAGLLDQGQAYFTS 541
Query: 130 ML--------------MAKIKARHAPFSRIMHA------GSTENVWLTLLSACRVHRNVE 169
M+ M + R + + + VW LL AC +H ++E
Sbjct: 542 MIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIE 601
Query: 170 LAEKVADMILMIEPNNTGAYVILIN------------EALKDL----------LERMEQE 207
L A +L +EP + +V+L N K++ L +E +
Sbjct: 602 LGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQ 661
Query: 208 GYV---------------------------------PDTKEVLLDVEEEQKKNILYYHGE 234
G V P+ VLLDVE+E+K+ +L+ H E
Sbjct: 662 GTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSE 721
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RLAL FGII TP G+ IR++KNL K +SK+V RE++VRD RF HF
Sbjct: 722 RLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRF-HHF 776
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
+IN L+ L + +EGY+PD VL DV++EQK +L+ H ERLAL +G++ TP G I
Sbjct: 710 VINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPI 769
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R++KNL S V+SKIV RE+IVRD RF HF
Sbjct: 770 RILKNLRSCLDCHTAFTVISKIVKREIIVRDINRF-HHF 807
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
+IN L+ L + +EGY+PD VL DV++EQK +L+ H ERLAL +G++ TP G I
Sbjct: 729 VINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPI 788
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R++KNL S V+SKIV RE+IVRD RF HF
Sbjct: 789 RILKNLRSCLDCHTAFTVISKIVKREIIVRDINRF-HHF 826
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E + ++ +++ GYVP T +VLLD++EE K++ LY H E+LA+ F +++TP GT+IR
Sbjct: 493 IYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIR 552
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K +SK+ +RE++VRD RF HF
Sbjct: 553 IVKNLRVCEDCHSATKFISKVYNREIVVRDRNRF-HHF 589
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 80/285 (28%)
Query: 83 GSVRKVFEIMA--VRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKI 135
G + F A + D LE D IS + C G D+GL++F M + KI
Sbjct: 371 GYANEAFNFFAEMIEDGLEPND--ISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKI 428
Query: 136 KARHAPFSRIMHAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILM 180
+ + AG + VW LL CR++++ E E+V IL
Sbjct: 429 EHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILE 488
Query: 181 IEPNNT-----------------------------------GAYVILINEA--------- 196
++ N++ G I IN +
Sbjct: 489 LDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDS 548
Query: 197 -----------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
+++L +M+ GY P T V+ +++EE+K++ L H E+LAL FG+I+T
Sbjct: 549 SHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINT 608
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+GTTIR++KNL K++SKIV RE++VRD RF HF
Sbjct: 609 SEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRF-HHF 652
>gi|383165792|gb|AFG65800.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165796|gb|AFG65802.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 63/96 (65%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+ISTP T+I
Sbjct: 49 IYTLLDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSIT 108
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
V KNL K +SK+V RE+I+RD RF R
Sbjct: 109 VTKNLRVCGDCHRATKFISKVVGREIIMRDANRFHR 144
>gi|358357216|gb|AEU08448.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L +L +++ GYVPDT+ VL D+ E+QK+ +L YH ERLA +G++STP GT IR++KN
Sbjct: 56 LDNLNQQIRDAGYVPDTRYVLHDMNEKQKEQVLCYHSERLATAYGLLSTPPGTPIRIMKN 115
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
L + K +SK+V RE+I RD RF HF+
Sbjct: 116 LRICGDCHNATKFISKVVAREIIARDGNRF-HHFI 149
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 107/259 (41%), Gaps = 81/259 (31%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHAGSTEN-- 153
+ + CG G EGL+ F M M + R + M+ EN
Sbjct: 437 VLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNL--IENMP 494
Query: 154 ------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------- 194
VW LLSACR H+N++LAE A +L +EP++ G Y++L N
Sbjct: 495 VEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAE 554
Query: 195 ---------------------------------------EALKDLLERM----EQEGYVP 211
E + LE++ + GY P
Sbjct: 555 LRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCP 614
Query: 212 DTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVS 271
D V+ DV+EE K + L +H E++A+ +G++ P G IRV+KNL K+++
Sbjct: 615 DGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIA 674
Query: 272 KIVHREMIVRDNRRFCRHF 290
++ RE+I+RD RF HF
Sbjct: 675 QVTGREIILRDANRF-HHF 692
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L +M+ GY+PD VL DVEE++K++IL H ERLA+ FGIISTP + IR
Sbjct: 784 IYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIR 843
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +S+I RE++VRD+ RF HF
Sbjct: 844 IFKNLRVCGDCHNATKFISRITQREIVVRDSNRF-HHF 880
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 54/145 (37%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE------- 152
+++ N+I + G +G ++ LK FG+ML +K H F ++ H+G E
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 645
Query: 153 -------------------------------------------NVWLTLLSACRVHRNVE 169
++W LL ACR+H N+E
Sbjct: 646 LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 705
Query: 170 LAEKVADMILMIEPNNTGAYVILIN 194
L + +D + ++ N G YV+L N
Sbjct: 706 LGKFASDRLFEVDSKNVGYYVLLSN 730
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 183 PNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
P + AY E L+ L + +++ GYV DT+ VL D+++E K+ L YH ERLA+ +G+
Sbjct: 464 PEKSKAY-----EKLRSLHKGVKEAGYVSDTRYVLHDLDQEAKEKSLLYHSERLAIAYGL 518
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ISTP GTT+R+IKNL + K++S I RE+IVRDN+RF HF
Sbjct: 519 ISTPPGTTLRIIKNLRICGDCHNFIKILSNIEKREIIVRDNKRF-HHF 565
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L +M+ GY+PD VL DVEE++K++IL H ERLA+ FGIISTP + IR
Sbjct: 784 IYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIR 843
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +S+I RE++VRD+ RF HF
Sbjct: 844 IFKNLRVCGDCHNATKFISRITQREIVVRDSNRF-HHF 880
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 54/145 (37%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE------- 152
+++ N+I + G +G ++ LK FG+ML +K H F ++ H+G E
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 645
Query: 153 -------------------------------------------NVWLTLLSACRVHRNVE 169
++W LL ACR+H N+E
Sbjct: 646 LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIE 705
Query: 170 LAEKVADMILMIEPNNTGAYVILIN 194
L + +D + ++ N G YV+L N
Sbjct: 706 LGKFASDRLFEVDSKNVGYYVLLSN 730
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 81/283 (28%)
Query: 89 FEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------------- 130
F + AV F ++ + N IT + C +G +EG K+F M
Sbjct: 681 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY 740
Query: 131 -LMAKIKARHAPFSRI------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP 183
M + +R F+ M VW +LL ACR+H N +LAE A + +EP
Sbjct: 741 ACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 800
Query: 184 NNTGAYVILIN-----------EALKDLLER----------------------------- 203
++G YV++ N ++ L++
Sbjct: 801 QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP 860
Query: 204 -MEQ-----EGYVPDTKE---------VLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
MEQ E D KE VL DV+E++K+ L H E++AL FG+IST G
Sbjct: 861 LMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAG 920
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
T +R+IKNL K +SK+ R++I+RDN RF HF+
Sbjct: 921 TPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRF-HHFV 962
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 104/255 (40%), Gaps = 77/255 (30%)
Query: 112 AGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHAGSTENV--- 154
+ C G +EGLK + M M + R F+ M + V
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 155 ---WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
W +LL ACR H +++AE A ++ IEP N+G Y++L N
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 195 -----------------------------------EALKDLLERME----QEGYVPDTKE 215
E++ +L+ ++ + GY PD
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSY 620
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
L DV+EE+K N L YH ERLA+ + ++ +G IRV+KNL K++SK+
Sbjct: 621 ALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKE 680
Query: 276 REMIVRDNRRFCRHF 290
RE+I+RD RF HF
Sbjct: 681 REIILRDANRF-HHF 694
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 82/189 (43%), Gaps = 56/189 (29%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALKD-- 199
TLL ACR+H+N+ELAE A +L ++P + YV L N ++KD
Sbjct: 401 TLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNK 460
Query: 200 --------------------------------------LLERMEQEGYVPDTKEVLLDVE 221
L +M GYVPD + L DV
Sbjct: 461 VIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVG 520
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EEQKK IL H E+LA+ +G+I P GT IRV KNL K +S I R +IVR
Sbjct: 521 EEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVR 580
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 581 DTTRF-HHF 588
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMA-KIKARHAPFSRIM----HAGSTEN---------- 153
S+ C +G ++G ++F M+ K+K R ++ ++ AG E
Sbjct: 401 SLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV 460
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+W TLL+AC++H+ E+AE++++ I+ ++P + +YV+L N
Sbjct: 461 QPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQI 520
Query: 195 -EALKD----------------------------------------LLERMEQEGYVPDT 213
+A++D L+ ++Q GYVP+
Sbjct: 521 RKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPEL 580
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D++ E+K+ L +H E+ A+ F +++T + IRV+KNL + K +S+I
Sbjct: 581 GSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRI 640
Query: 274 VHREMIVRDNRRFCRHF 290
+RE+IVRD RF HF
Sbjct: 641 RNREIIVRDASRF-HHF 656
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L+ L +M+ GY+PD VL DVEE++K++IL H ERLA+ FGIISTP + IR
Sbjct: 551 IYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIR 610
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +S+I RE++VRD+ RF HF
Sbjct: 611 IFKNLRVCGDCHNATKFISRITQREIVVRDSNRF-HHF 647
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 54/145 (37%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE------- 152
+++ N+I + G +G ++ LK FG+ML +K H F ++ H+G E
Sbjct: 353 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 412
Query: 153 -------------------------------------------NVWLTLLSACRVHRNVE 169
++W LL ACR+H N+E
Sbjct: 413 LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472
Query: 170 LAEKVADMILMIEPNNTGAYVILIN 194
L + +D + ++ N G YV+L N
Sbjct: 473 LGKFASDRLFEVDSKNVGYYVLLSN 497
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 85/189 (44%), Gaps = 56/189 (29%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
TLL+ACRV++N+E AE A ++ +P N GAYV L N
Sbjct: 407 TLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNA 466
Query: 195 -----------------------------EALKDLLER----MEQEGYVPDTKEVLLDVE 221
+ + D L+R M+ GY PD L DVE
Sbjct: 467 VVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVE 526
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E K +L H E+LA+ FG+IST G T+R+ KNL + K++SKI RE+I+R
Sbjct: 527 ESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILR 586
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 587 DTTRF-HHF 594
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 56/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL AC++H NVE+ ++VA+ ++ + P+++G+YV L N
Sbjct: 430 IWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMK 489
Query: 195 --------------------------------EALKDLLERMEQE----GYVPDTKEVLL 218
+ + +L+ M + GY P+T +VL
Sbjct: 490 EMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLT 549
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+++EE K++ L YH E++A+ FG+IST T +R+ KNL K++SKI R++
Sbjct: 550 NMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKI 609
Query: 279 IVRDNRRFCRHFL 291
IVRD +RF HF+
Sbjct: 610 IVRDRKRF-HHFV 621
>gi|190612757|gb|ACE80756.1| pentatricopeptide repeat protein [Nardia scalaris]
Length = 152
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L+ L +M++ GYVPDT++VL D+ EE+K + L YH E+LA+ +G++STP GT +R
Sbjct: 52 IHEQLEYLTAQMKEAGYVPDTRQVLHDLAEEEKVSHLGYHSEKLAIAYGLMSTPPGTLLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKIV R +IVRD RF HF
Sbjct: 112 IYKNLRVCHDCHTATKFISKIVGRAIIVRDGNRF-HHF 148
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 80/285 (28%)
Query: 83 GSVRKVFEIMA--VRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKI 135
G + F A + D LE D IS + C G D+GL++F M + KI
Sbjct: 340 GYANEAFNFFAEMIEDGLEPND--ISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKI 397
Query: 136 KARHAPFSRIMHAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILM 180
+ + AG + VW LL CR++++ E E+V IL
Sbjct: 398 EHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILE 457
Query: 181 IEPNNT-----------------------------------GAYVILINEA--------- 196
++ N++ G I IN +
Sbjct: 458 LDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDS 517
Query: 197 -----------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
+++L +M+ GY P T V+ +++EE+K++ L H E+LAL FG+I+T
Sbjct: 518 SHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINT 577
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+GTTIR++KNL K++SKIV RE++VRD RF HF
Sbjct: 578 SEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRF-HHF 621
>gi|302775568|ref|XP_002971201.1| hypothetical protein SELMODRAFT_94629 [Selaginella moellendorffii]
gi|300161183|gb|EFJ27799.1| hypothetical protein SELMODRAFT_94629 [Selaginella moellendorffii]
Length = 603
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L E + ++GYVPDT+EVL DV EEQK+ +L H E+LA+ FG+IST GTTIR
Sbjct: 496 IRRELGRLHELVVKQGYVPDTREVLHDVCEEQKRRLLLNHSEKLAIAFGVISTAPGTTIR 555
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SK+ R++++RD RF HF
Sbjct: 556 ILKNLRVCSDCHAAAKLMSKVTRRKIVIRDCHRF-HHF 592
>gi|358357242|gb|AEU08461.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
++ LK L E+++ GYVPDT+ VLLD+EEEQK+ L +H ERLA+ FG+I TP G IR
Sbjct: 52 VHAELKRLSEQLKDAGYVPDTRFVLLDLEEEQKEFSLCHHSERLAIAFGLICTPPGAPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K +SKI+ R +++RD RF HF
Sbjct: 112 IIKNLRVCGDCHIATKFISKIIGRGIVLRDASRF-HHF 148
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
V +IN L+ L + ++ GY+P+ VLLDVE+E+K+ +L+ H ERLAL FGII TP G+
Sbjct: 634 VRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGS 693
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR++KNL K +SK+V RE++VRD RF HF
Sbjct: 694 PIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRF-HHF 733
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 109/275 (39%), Gaps = 82/275 (29%)
Query: 97 FLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML--------------MAKIKA 137
F E Y I N IT +GC +G EG + F ++ + I
Sbjct: 366 FDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILG 425
Query: 138 RHAPFSRIMHAG------STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI 191
R F + + ++W +LL++CR++ NV LAE VA+ + IEPNN G YV+
Sbjct: 426 RSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVM 485
Query: 192 LIN--------EALKDLLERMEQEG----------------------------------- 208
L N E +K + E M G
Sbjct: 486 LSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKK 545
Query: 209 -------------YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
YVP+T VL D+ EE K + H ERLA VF +I+T G IR+ K
Sbjct: 546 IWNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITK 605
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
NL K VSK+ R +++RD RF HF
Sbjct: 606 NLRVCVDCHSWMKAVSKVTRRLIVLRDTNRF-HHF 639
>gi|388458806|gb|AFK31269.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 294
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIGLDPDNSGRYVLLANLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMALDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|358357212|gb|AEU08446.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I++ L+ L ME+ GYVPDT+ VL DVE EQK+ L +H E+LA+ FG+ISTP GT
Sbjct: 49 IVKIHDELRRLQGLMEEAGYVPDTRFVLHDVEGEQKEFSLCHHSEKLAIAFGLISTPPGT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR+IKNL K +S+IV R ++VRD RF HF
Sbjct: 109 PIRIIKNLRVCGDCHTAIKFISRIVRRAIVVRDGNRF-HHF 148
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 110/260 (42%), Gaps = 76/260 (29%)
Query: 106 SRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIK--ARHAPFSRI 145
S + I C +G +EG KFF M L+A++ ++ F
Sbjct: 875 SFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIES 934
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
M +W LLS CR+H +V+LAEKVA+ I +EP+NT YV+L N E +
Sbjct: 935 MPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEV 994
Query: 198 KDLLERMEQEGYV------------------------PDTKE------------------ 215
K L +RM++ G+ P K
Sbjct: 995 KKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYF 1054
Query: 216 -----VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
VL++ ++ +K+ I H E+ A+ FGI++ P G T+RV KN K +
Sbjct: 1055 SMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFM 1114
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SK RE+++RD+ RF HF
Sbjct: 1115 SKTTKREIVLRDSNRF-HHF 1133
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ A C G DEG ++ M L+ + +S I M
Sbjct: 407 SVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKV 466
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----EALKDL--- 200
+W LLSACR+H+NVELAE + ++ +N+G YV+L N KD+
Sbjct: 467 KPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERI 526
Query: 201 -------------------------------------------LERM----EQEGYVPDT 213
LE++ ++ GYVP+T
Sbjct: 527 RLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNT 586
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D++EE+K++ L H E+LA+ F ++++ + I +IKNL K ++KI
Sbjct: 587 GSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKI 646
Query: 274 VHREMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 647 TEREIIIRDLQRF-HHF 662
>gi|388458818|gb|AFK31275.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 294
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|326515404|dbj|BAK03615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 92/158 (58%), Gaps = 22/158 (13%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDL------------- 200
+W ++L+ R++ +++L ++V ++++ ++P+ + + L
Sbjct: 371 IWESVLNLARMNGDIDLEDRVEELLVSLDPSKANPKKLPTPPPKRRLGINMLDGRNKLGE 430
Query: 201 ------LER--MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+E+ + ++ YVPDT+ VL D+++E K+ L YH ERLA+ +G+ISTP T +R
Sbjct: 431 YRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLR 490
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL + K++S+IV RE+IVRDN+RF HF
Sbjct: 491 IIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRF-HHF 527
>gi|413932955|gb|AFW67506.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 304
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
+++L ++ GYVPDT+ VL D++E+ K L YH ERLA+ FG++STP GT +RV+KN
Sbjct: 201 VRELHAQIRAAGYVPDTRYVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVMKN 260
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K+++K+ RE++VRDN+RF HF
Sbjct: 261 LRICGDCHNAVKLIAKVTGREIVVRDNKRF-HHF 293
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 57/201 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------- 194
MH + LL AC++++N E+AE+V +M++ ++P ++G YV+L N
Sbjct: 412 MHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKI 471
Query: 195 EALKDLLE-------------------------------------RMEQE--------GY 209
E+L+D+++ R +E GY
Sbjct: 472 ESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGY 531
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
+T + DV+EE+K++ ++ H E+LA+ +G++ T GTTIR++KNL K+
Sbjct: 532 KGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKL 591
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S++ RE+IVRD RF HF
Sbjct: 592 ISEVYGRELIVRDRNRF-HHF 611
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 105/258 (40%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM--------------------AKIKARHAPFSRIMHA 148
S+ + C G DEG + F M A A R M
Sbjct: 638 SVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDV 697
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
T VW TLL ACR +R+V+ M+ ++P + AYV+L N
Sbjct: 698 KPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEV 757
Query: 195 -----------EALKDL--------------------------LERMEQE----GYVPDT 213
EA K LER+ E GYVPDT
Sbjct: 758 RTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDT 817
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL V+E +K+ +L H ERLA+ G++S+ T+RV+KNL + K +SKI
Sbjct: 818 RLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKI 876
Query: 274 VHREMIVRDNRRFCRHFL 291
V++E++VRD RF HF+
Sbjct: 877 VNKEIVVRDTHRF-HHFV 893
>gi|226505522|ref|NP_001145034.1| uncharacterized protein LOC100278213 [Zea mays]
gi|195650169|gb|ACG44552.1| hypothetical protein [Zea mays]
Length = 306
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
+++L ++ GYVPDT+ VL D++E+ K L YH ERLA+ FG++STP GT +RV+KN
Sbjct: 203 VRELHAQIRAAGYVPDTRYVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVMKN 262
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K+++K+ RE++VRDN+RF HF
Sbjct: 263 LRICGDCHNAVKLIAKVAGREIVVRDNKRF-HHF 295
>gi|388458804|gb|AFK31268.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388458808|gb|AFK31270.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388458814|gb|AFK31273.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458820|gb|AFK31276.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458822|gb|AFK31277.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458824|gb|AFK31278.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458826|gb|AFK31279.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458828|gb|AFK31280.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458830|gb|AFK31281.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458832|gb|AFK31282.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458836|gb|AFK31284.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458838|gb|AFK31285.1| hypothetical protein, partial [Oryza rufipogon]
gi|388458840|gb|AFK31286.1| hypothetical protein, partial [Oryza rufipogon]
gi|388458842|gb|AFK31287.1| hypothetical protein, partial [Oryza rufipogon]
gi|388458844|gb|AFK31288.1| hypothetical protein, partial [Oryza rufipogon]
Length = 294
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|388458810|gb|AFK31271.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 294
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMALDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 67/96 (69%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L + M+ GYVPDT+ VL DV++E K+ ++ YH E+LA+ F +++TP+G+ IR
Sbjct: 545 IHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIR 604
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
V+KNL +K +SK+V+RE++VRD RF R
Sbjct: 605 VVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHR 640
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W TLL ACR+H+N LA A IL +EP++ GA V+L N +A++
Sbjct: 438 IWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMR 497
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D L+ R++ GYVP T+ VL
Sbjct: 498 DRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQ 557
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ EQK+++L YH E++A+VFG + DG IR++KNL K+VSK R +
Sbjct: 558 DLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVI 617
Query: 279 IVRDNRRFCRHF 290
++RD RF HF
Sbjct: 618 VIRDPVRF-HHF 628
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 81/283 (28%)
Query: 89 FEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------------- 130
F + AV F ++ + N IT + C +G +EG K+F M
Sbjct: 438 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQY 497
Query: 131 -LMAKIKARHAPFSRI------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP 183
M + +R F+ M VW +LL ACR+H N +LAE A + +EP
Sbjct: 498 ACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEP 557
Query: 184 NNTGAYVILIN-----------EALKDLLER----------------------------- 203
++G YV++ N ++ L++
Sbjct: 558 QSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP 617
Query: 204 -MEQ-----EGYVPDTKE---------VLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
MEQ E D KE VL DV+E++K+ L H E++AL FG+IST G
Sbjct: 618 LMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAG 677
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
T +R+IKNL K +SK+ R++I+RDN RF HF+
Sbjct: 678 TPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRF-HHFV 719
>gi|388458816|gb|AFK31274.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 294
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|388458834|gb|AFK31283.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 294
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 53 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 100
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 101 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 156
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 157 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 216
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 217 EALHDVTEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 276
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 277 GREIVVRDRSRF-HHF 291
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
V +IN L+ L + ++ GY+P+ VLLDVE+E+K+ +L+ H ERLAL FGII TP G+
Sbjct: 501 VRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGS 560
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR++KNL K +SK+V RE++VRD RF HF
Sbjct: 561 PIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRF-HHF 600
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 114/283 (40%), Gaps = 81/283 (28%)
Query: 89 FEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM-----LMAKIKAR 138
F A+R F E C IT C G EG KFF M + K++
Sbjct: 153 FSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHY 212
Query: 139 HAPFSRIMHAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILMIEP 183
+ + AG E +W TLL ACR+H N+ L E++A+ ++
Sbjct: 213 GCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNL 272
Query: 184 NNTGAYVILIN--------EALKDLLERMEQEG--------------------------- 208
N+G YV+L N E + + M++ G
Sbjct: 273 ANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHP 332
Query: 209 --------------------YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
Y P T VL D+E+ QK+ L H E+LAL FG+I+T G
Sbjct: 333 KSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPG 392
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
TTI+++KNL K++SKI R++++RD RF HF+
Sbjct: 393 TTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNRF-HHFV 434
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 27/236 (11%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
HF VD L +R+G V+K +E ++ + I R ++ C +G D L F
Sbjct: 362 HFGCMVDLL--ARAGQVKKAYEY--IKSMPMQPNVVIWR-TLLGACTVHG--DSDLAEFA 414
Query: 129 QMLMAKIKARHA-PFSRIMHAGSTENVWLTL-----------LSACRVHRNVELAEKVAD 176
++ + +++ H+ + + + ++E W + + H VE+ +V +
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 177 MIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
++ P + Y LK++ R+ EGYVP V +DVEEE+K+N + YH E
Sbjct: 475 FLMGDKSHPQSDAIYA-----KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 529
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++A+ F +ISTP+ + I V+KNL K+VSK+ +RE++VRD RF HF
Sbjct: 530 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRF-HHF 584
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 63/222 (28%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G +G DE L+F +M + + +VW TL++ CRV N+E+ ++
Sbjct: 592 GNSGYLDEALEFVEKMPLEP----------------SVDVWETLMNICRVQGNMEIGDRC 635
Query: 175 ADMILMIEPN----NTGAYVILINE------------ALKDLLE---------------- 202
A+++ +EP+ + A ++ + A ++LLE
Sbjct: 636 AELVEHLEPSRLTEQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHP 695
Query: 203 --------------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
+M++ GYVP+T+ VL D+++E K+ L H ERLA+ +G++S+P
Sbjct: 696 ENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPAR 755
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ IRVIKNL K++SK+V RE+I+RD +RF HF
Sbjct: 756 SPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRF-HHF 796
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 56/194 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
E VW LL+A R+H NV+L + + IE N A+V+L N
Sbjct: 425 EGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNM 484
Query: 195 ----------------------------------EALKDLLERMEQ----EGYVPDTKEV 216
+ ++ +L M +GY +TKEV
Sbjct: 485 MKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEV 544
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+EEE+K+ + H E+LAL FG+I+ P+ T IR++KNL + K++SK+ R
Sbjct: 545 LFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDR 604
Query: 277 EMIVRDNRRFCRHF 290
E+++RD RF HF
Sbjct: 605 EIVMRDRNRF-HHF 617
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 91/204 (44%), Gaps = 56/204 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY------------ 189
F + M + W LL+ACR+H N+EL + ++ + ++ N G Y
Sbjct: 355 FIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGK 414
Query: 190 ------------------------VILINEA-------------------LKDLLERMEQ 206
+IL N+ L+DL +++
Sbjct: 415 WEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKT 474
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GYVPD VL DVEE++K++IL H ERLA+ +GIIST T IR+ KNL
Sbjct: 475 IGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTV 534
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K +S I RE+IVRD+ RF HF
Sbjct: 535 TKFISIITEREIIVRDSSRF-HHF 557
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ A C G DEG ++ M L+ + +S I M
Sbjct: 408 SVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKV 467
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---EA--LKDL--- 200
+W LLSACR+H+NVELAE + ++ +N+G YV+L N EA KD+
Sbjct: 468 KPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERI 527
Query: 201 -------------------------------------------LERM----EQEGYVPDT 213
LE++ ++ GYVP+T
Sbjct: 528 RLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNT 587
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D++EE+K++ L H E+LA+ F ++++ + I +IKNL K ++KI
Sbjct: 588 GSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKI 647
Query: 274 VHREMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 648 TEREIIIRDLQRF-HHF 663
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 104/258 (40%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM--------------------AKIKARHAPFSRIMHA 148
S+ + C G DEG + F M A A R M
Sbjct: 638 SVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDV 697
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
T VW TLL ACR +R+V+ M+ ++P + AYV+L N
Sbjct: 698 KPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEV 757
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E + LER+ E GYVPDT
Sbjct: 758 RTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDT 817
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ VL V+E +K+ +L H ERLA+ G++S+ T+RV+KNL + K +SKI
Sbjct: 818 RLVLRKVDEAEKERLLCQHSERLAIALGVMSSST-DTVRVMKNLRVCEDCHNATKFISKI 876
Query: 274 VHREMIVRDNRRFCRHFL 291
V++E++VRD RF HF+
Sbjct: 877 VNKEIVVRDTHRF-HHFV 893
>gi|225430210|ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
[Vitis vinifera]
Length = 807
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 63/222 (28%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G +G DE L+F +M + + +VW TL++ CRV N+E+ ++
Sbjct: 592 GNSGYLDEALEFVEKMPLE----------------PSVDVWETLMNICRVQGNMEIGDRC 635
Query: 175 ADMILMIEPN----NTGAYVILINE------------ALKDLLE---------------- 202
A+++ +EP+ + A ++ + A ++LLE
Sbjct: 636 AELVEHLEPSRLTEQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHP 695
Query: 203 --------------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
+M++ GYVP+T+ VL D+++E K+ L H ERLA+ +G++S+P
Sbjct: 696 ENDKIYAKLRGLKAQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPAR 755
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ IRVIKNL K++SK+V RE+I+RD +RF HF
Sbjct: 756 SPIRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRF-HHF 796
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 353 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 400
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 401 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 456
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 457 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 516
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 517 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 576
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 577 GREIVVRDRSRF-HHF 591
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 106/256 (41%), Gaps = 82/256 (32%)
Query: 100 YCDYAISRNSITA-----GC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAG 149
Y ++ +SR+ I GC G+ G DE K +M M A
Sbjct: 353 YLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLA------------ 400
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
V LL AC++H +V+L E + ++ ++P+N+G YV+L N
Sbjct: 401 ----VLGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVR 456
Query: 195 ----------EALKDLLE------------------------------RMEQEGYVPDTK 214
EA + ++E R+ EGYVPDT
Sbjct: 457 RLMDERNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEGYVPDTG 516
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
E L DV EE K+ L H E+LA+ FG++ T+R+ KNL R K VS++
Sbjct: 517 EALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRETLRITKNLRVCRDCHEATKYVSRVF 576
Query: 275 HREMIVRDNRRFCRHF 290
RE++VRD RF HF
Sbjct: 577 GREIVVRDRSRF-HHF 591
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 113/261 (43%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIMH----AGSTEN------ 153
IS S+ + CGQ G DEG K+F M IK R +S +++ AG +
Sbjct: 490 ISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA---------------- 188
VW LL++CR+ NV+LAE A + +EP N G
Sbjct: 550 EIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTE 609
Query: 189 ----------------------------YVIL-----------INEALKDLLERMEQEGY 209
Y +L I E + ++ E M + G+
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGH 669
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+ L DVEE++++ +L+ H E+LA+VFG+++TPDGT ++VIKNL K
Sbjct: 670 RPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKF 729
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S RE+ +RD RF HF
Sbjct: 730 ISSYAGREIFIRDTNRF-HHF 749
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 121/318 (38%), Gaps = 118/318 (37%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G K+FE+M +D + + N++ +G Q+G D+ L F +M+ KI+ F
Sbjct: 336 GDAWKLFEVMKKKDVVAW-------NAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 143 SRIM----------------------------------------HAGSTEN--------- 153
++ AG E
Sbjct: 389 VAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Query: 154 ------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKD 199
V+ TLL ACRVH+NVELAE A+ +L + N YV L N E +
Sbjct: 449 FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVAR 508
Query: 200 LLERMEQE-----------------------------------------------GYVPD 212
+ +RM++ GY P+
Sbjct: 509 VRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPE 568
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
+ L +VEEEQK+ +L +H E+LA+ FG I P G+ I+V KNL K +S+
Sbjct: 569 LEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISE 628
Query: 273 IVHREMIVRDNRRFCRHF 290
I RE+IVRD RF HF
Sbjct: 629 IEKREIIVRDTTRF-HHF 645
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 55/186 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W TLLSAC+ +N ++AE++A ++ ++P+++ +YV+L N +A++
Sbjct: 511 IWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMR 570
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D ++ ++ Q GY PD VL
Sbjct: 571 DNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLH 630
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K+ L +H E+LA+ F +S P+G IRV+KNL K++S++ RE+
Sbjct: 631 DMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREI 690
Query: 279 IVRDNR 284
+VRD++
Sbjct: 691 VVRDDK 696
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI E +KDLL ++ GYVPD VL D+E+EQK + L YH E+LA+ +G++ TP G I
Sbjct: 282 LIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPI 341
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RVIKNL K++SK+ +R ++VRD RF HF
Sbjct: 342 RVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRF-HHF 379
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 27/236 (11%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
HF VD L +R+G V+K +E ++ + I R ++ C +G D L F
Sbjct: 229 HFGCMVDLL--ARAGQVKKAYEY--IKSMPMQPNVVIWR-TLLGACTVHG--DSDLAEFA 281
Query: 129 QMLMAKIKARHA-PFSRIMHAGSTENVWLTL-----------LSACRVHRNVELAEKVAD 176
++ + +++ H+ + + + ++E W + + H VE+ +V +
Sbjct: 282 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 341
Query: 177 MIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
++ P + Y LK++ R+ EGYVP V +DVEEE+K+N + YH E
Sbjct: 342 FLMGDKSHPQSDAIYA-----KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 396
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++A+ F +ISTP+ + I V+KNL K+VSK+ +RE++VRD RF HF
Sbjct: 397 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRF-HHF 451
>gi|358357224|gb|AEU08452.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L +M++ GY+PDT VL DVEEEQK++ L H E+LA+ FG+ISTP TT+R
Sbjct: 52 IHAELRRLSGQMKEAGYMPDTHFVLHDVEEEQKEDSLCPHSEKLAIAFGLISTPPRTTLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +SKIV R ++VRD RF HF
Sbjct: 112 VIKNLRVCGDCHTATKFISKIVGRAIVVRDANRF-HHF 148
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EA------- 196
+VW + LS+CR+H+N + + V++M+L P++ AY++L N EA
Sbjct: 553 SVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLM 612
Query: 197 ---------------LKD------------------------LLERMEQEGYVPDTKEVL 217
LKD L+ R+++ GY D K V+
Sbjct: 613 YQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVM 672
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVEEEQ + ++ +H E+LALVF II+T T IR++KNL + K S+++ RE
Sbjct: 673 QDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLERE 732
Query: 278 MIVRDNRRFCRHF 290
+IVRD RF HF
Sbjct: 733 IIVRDTHRF-HHF 744
>gi|361066849|gb|AEW07736.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 66/94 (70%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L E++++ GY PDT VL D+EEE K+++L YH E+LA+ +GIISTP G++IR
Sbjct: 42 IYTTLESLTEQIKEVGYTPDTNFVLHDLEEEHKEHVLCYHSEKLAIAYGIISTPPGSSIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL + + K +S+I RE+I+RD RF
Sbjct: 102 IVKNLRACGDCHNAIKFISRISTREIILRDVSRF 135
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 77/262 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSR------ 144
I+ N++ C G +EG+K+F +M M + R F +
Sbjct: 313 ITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEIIQ 372
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M ++ LL ACR H+N+EL +KV ++ N+ YV+L N
Sbjct: 373 TMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDHAGYVLLSNIYALDGNWGG 432
Query: 195 --EALKDLLER-------------------------------------------MEQEGY 209
+ K +L+R ++ GY
Sbjct: 433 VHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRKRDIYKMLGEICQQLKSSGY 492
Query: 210 VPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
PDT +VLLD+++E K++ L H E+LA+ FG+IST GT IRV+ NL + K
Sbjct: 493 TPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRVVNNLRICGDCHNAIK 552
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKI R +IVRD RF HF
Sbjct: 553 LISKIYGRCIIVRDANRF-HHF 573
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L ++ RM+Q GYV +T EV D+E+E+K+ L YH E+LA+ FG+I P TIR
Sbjct: 437 IHAKLIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIR 496
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+VSKI HRE++VRD RF HF
Sbjct: 497 IVKNLRFCTDCHSFAKLVSKIYHREIVVRDRARF-HHF 533
>gi|358357188|gb|AEU08434.1| pentatricopeptide repeat protein [Lejeunea cavifolia]
Length = 152
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 196 ALKDLLER----MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
A++ LER M+ GYVPDT VL DVEEEQK + L YH E+LA+ FG++STP GT I
Sbjct: 51 AIRAELERLSVLMKDAGYVPDTSFVLHDVEEEQKISRLLYHSEKLAIAFGLLSTPAGTPI 110
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+ KNL K +S IV RE+IVRD RF HF
Sbjct: 111 RIFKNLRVCGDCHTATKYISAIVGREIIVRDTTRF-HHF 148
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 112/282 (39%), Gaps = 88/282 (31%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKARHAP------ 141
A+ F + C + + +T + C +G EGL+ F M K K + P
Sbjct: 423 ALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETM---KCKYQVEPGIEHYA 479
Query: 142 -----------------FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN 184
M VW LL ACR H ++LAE + + +EP
Sbjct: 480 CLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPK 539
Query: 185 NTGAYVILIN-----------EALKD---------------------------------- 199
N G YV+L N E L++
Sbjct: 540 NAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHP 599
Query: 200 -------LLERM----EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
+LE++ + GY PD VL DV+EE+K + L YH E+LA+ +G++ P+G
Sbjct: 600 EQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEG 659
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IRV+KNL K+++K+ RE+I+RD RF HF
Sbjct: 660 MPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRF-HHF 700
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 86/193 (44%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK----- 198
VW LL+ACRVH NVEL E+ A+ + +EP N YV+L N EA K
Sbjct: 584 TVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLM 643
Query: 199 -----------------------------------------DLLERMEQEGYVPDTKEVL 217
+++ +++ GYVPD L
Sbjct: 644 KLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFAL 703
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D++EE K+ L YH E+LA+ FG+++ P G IR+ KNL K VS + HR
Sbjct: 704 HDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRH 763
Query: 278 MIVRDNRRFCRHF 290
+I+RD+ F HF
Sbjct: 764 VILRDSNCF-HHF 775
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 113/276 (40%), Gaps = 80/276 (28%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF---- 142
KVF+ M ++D I+ ++ G QNG + + ++ K H
Sbjct: 441 KVFDSMEIQD-------VITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDL 493
Query: 143 ----SRIMHAGSTEN---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY 189
++M A N VW LL+ACRVH NVEL E+ A+ + +EP N Y
Sbjct: 494 LGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPY 553
Query: 190 VILIN---------EALK------------------------------------------ 198
V+L N EA K
Sbjct: 554 VLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIY 613
Query: 199 ----DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
+++ +++ GYVPD L D++EE K+ L YH E+LA+ FG+++ P G IR+
Sbjct: 614 SKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIF 673
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL K VS + HR +I+RD+ F HF
Sbjct: 674 KNLRICGDCHTAMKYVSGVFHRHVILRDSNCF-HHF 708
>gi|358357206|gb|AEU08443.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
IN LK L +M++ G V DT+ VL DVEEEQK+ L++H ERLA+ FG+ISTP GT IR
Sbjct: 52 INAELKRLAGQMKEVGCVLDTRFVLHDVEEEQKQFSLWHHSERLAIAFGLISTPQGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +SKIV R ++V D RF HF
Sbjct: 112 VIKNLRVCGDCHTATKFISKIVGRAVVVWDASRF-HHF 148
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 104/256 (40%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS------RIMHAG 149
+ + C Q G D G ++F M+ M + AR F + M
Sbjct: 473 VLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEME 532
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +LLSAC+ H VE E VA+ + +EP N GA+V+L N
Sbjct: 533 PDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIR 592
Query: 195 -----------------EALKDLLERMEQEGYVPDTKEV--------------------- 216
E D+ E + + + P+ +
Sbjct: 593 TRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTS 652
Query: 217 --LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
L D++EE K+ L H E+LA+ FG+I T GTTIR++KNL K++SKI
Sbjct: 653 EVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIF 712
Query: 275 HREMIVRDNRRFCRHF 290
+RE+I RD RF HF
Sbjct: 713 NREIIARDRNRF-HHF 727
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 68/96 (70%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L + M++ GYVPDT+ VL DV++E K+ ++ YH E+LA+ F +++TP+G+ IR
Sbjct: 530 IHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIR 589
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
V+KNL +K +SK+V+RE++VRD RF R
Sbjct: 590 VVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHR 625
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTE 152
C +G D+G+++F +M L+ + +A I M
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
VW+ LS CR+H VEL E A+ I + N+ G+Y +L N
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 195 ----------------------------------EALKDLLERMEQ---EGYVPDTKEVL 217
E + LL+ M++ GYVP+T L
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFAL 767
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++E+K ++L+ H E+LAL +GI++TP G IR+ KNL +S+I+ +
Sbjct: 768 HDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHD 827
Query: 278 MIVRDNRRFCRHF 290
+I+RD+ RF HF
Sbjct: 828 IILRDSSRF-HHF 839
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 56/203 (27%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----EALKD 199
R M T ++W LL+A R+H+N++LAE A + + P +Y+ L N E D
Sbjct: 525 RTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWD 584
Query: 200 LLER---------------------------------------------------MEQEG 208
+ER +++ G
Sbjct: 585 DVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAG 644
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y PDT V DVEEE K+ +L+ H ERLA+ F +I+T GT IR+ KNL K
Sbjct: 645 YKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTK 704
Query: 269 VVSKIVHREMIVRDNRRFCRHFL 291
++S++ RE+I+RD RF HF+
Sbjct: 705 LISELTGREIIMRDIHRF-HHFI 726
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------EALK------ 198
VW LL CR+HR+ +L E V ++ +EP ++G YV+L N EA K
Sbjct: 481 VWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMS 540
Query: 199 ----------------------------------------DLLERMEQEGYVPDTKEVLL 218
+L + ++ GYVP T VL
Sbjct: 541 ERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLF 600
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K++ + H E+LA+ FG+IST I V+KNL K +S+I RE+
Sbjct: 601 DIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREI 660
Query: 279 IVRDNRRF 286
IVRDN RF
Sbjct: 661 IVRDNNRF 668
>gi|358357218|gb|AEU08449.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ + ++ I+ LK L M++ GYVPDT VL DVEEEQK+ L YH E+LA+ FG+I
Sbjct: 43 DKSHPQIVEIHAELKRLSGWMKEAGYVPDTGFVLHDVEEEQKEFSLCYHSEKLAIGFGLI 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
S P G I +IKNL K +SKIV RE++VRD+ RF HF
Sbjct: 103 SLPPGMPIHIIKNLRVCGDCHTATKFISKIVGREVVVRDSNRF-HHF 148
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 111/256 (43%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
I C G +EGLK+F +M + K++ + AG ++
Sbjct: 545 ILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQ 604
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
VW +LLS CR +E+ + VA+ +L +EP N YV L N
Sbjct: 605 PDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVR 664
Query: 195 EALKD----------------------------------------LLERMEQEGYVPDTK 214
+ +KD L ++M + GY P+T
Sbjct: 665 QMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTS 724
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DV+EE+K L H E+LA+ FG+++T GTT+R+ KNL + +K +S++
Sbjct: 725 AVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVT 784
Query: 275 HREMIVRDNRRFCRHF 290
RE+I+RDN+RF HF
Sbjct: 785 GREIIIRDNKRF-HHF 799
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 75/254 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLM--------------------AKIKARHAPFSRIMHAG 149
+ C G DEG +F M + A + R F R M
Sbjct: 337 VLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQ 396
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +L+SACR H +EL E + +L P + Y++L N
Sbjct: 397 PNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIR 456
Query: 195 ---------------------------------EALKD---LLERMEQE----GYVPDTK 214
KD ++E M +E G++ T
Sbjct: 457 REMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATS 516
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLLD++EE K+ L +H E+LA+ F ++ TP GT +RV+KNL K +S++
Sbjct: 517 EVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 576
Query: 275 HREMIVRDNRRFCR 288
RE++VRD RF R
Sbjct: 577 RREIVVRDRSRFHR 590
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M+ GY+PD VL DVEE++K++IL H ERLA+ FGIISTP + IR
Sbjct: 741 IYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIR 800
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +S+I RE++VRD++RF HF
Sbjct: 801 IFKNLRVCGDCHNATKFISRITEREIVVRDSKRF-HHF 837
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKA--RHA-----------------PFSRIMHAG 149
S+ + C +G DEG FF M IK +H F + M
Sbjct: 583 SLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLH 642
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
++W LL ACR+H N+EL + +D + ++ N G YV+L N
Sbjct: 643 PDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSN 687
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 120/281 (42%), Gaps = 83/281 (29%)
Query: 91 IMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM--------------- 130
+ AV F E I + IT +GC +G D GLK+F M
Sbjct: 353 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 412
Query: 131 ---LMAKIKARHAPFSRI---MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN 184
L+ + R A S++ M + ++W +LL+ACR HRN+E+AE A + ++EP
Sbjct: 413 VADLLGR-AGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 471
Query: 185 NTGAYVILIN-----------EALKDLLER-----------MEQEGYV----------PD 212
NTG YV+L N + L+ +++ +E G P
Sbjct: 472 NTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQ 531
Query: 213 TKEVLL-----------------------DVEEEQKKNILYYHGERLALVFGIISTPDGT 249
KE+ + D+ EE+K+ L H E+LA+ FGI++TP T
Sbjct: 532 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 591
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+RV KNL +S+I RE+IVRD RF HF
Sbjct: 592 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRF-HHF 631
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 104/256 (40%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHA------PFSRIMHAG 149
+ + C +G + G ++FG M+ M + R F R M
Sbjct: 341 LLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIE 400
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLL 201
+ TL+SACR H +L EK+ +++ EP + YV+L N E +
Sbjct: 401 PNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIR 460
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
E ME +G Y P T
Sbjct: 461 EVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTS 520
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLLD+ EE K++ L H E+LA+ FG++ TP GT IR++KNL +K +SKI
Sbjct: 521 EVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIY 580
Query: 275 HREMIVRDNRRFCRHF 290
RE+I+RD RF HF
Sbjct: 581 DREIIMRDRNRF-HHF 595
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
++ + L ERM +EGY PDT VL DV+E++K +L YH E+LA+ FG++ P G IR
Sbjct: 771 VHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIR 830
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+V R++++RD RRF HF
Sbjct: 831 VAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRF-HHF 867
>gi|358357210|gb|AEU08445.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I+ L+ L +M++ GY PDT+ VL DVE+EQK+ L +H E+LA+ FG+ISTP G
Sbjct: 49 IVEIHAELERLFRQMKEAGYQPDTRFVLHDVEDEQKELSLCHHSEKLAIAFGLISTPSGM 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR+IKNL K +SKIV R ++VRD RF HF
Sbjct: 109 PIRIIKNLRVCGDCHAATKFISKIVGRAVVVRDTYRF-HHF 148
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W TLL ACR+H+NVE+AE+ + +++P G YV+L N
Sbjct: 384 IWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIR 443
Query: 195 --------------------------------EALKDLLE----RMEQEGYVPDTKEVLL 218
E + +LE R+ Q GY P T VL
Sbjct: 444 RENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQ 503
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++E+ KK L H E+LA+ FG++ TP +T+R+ KNL + K++S R++
Sbjct: 504 DIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKL 563
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 564 IVRDRNRF-HHF 574
>gi|413923545|gb|AFW63477.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 423
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPF-----------SRI---------MHAGSTE 152
C + G ++GL+ F +M + A +A + R+ M G T+
Sbjct: 161 ACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTD 220
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI----------------LINEA 196
W +LL+ACR+H +++LAE+ + + N G YVI L EA
Sbjct: 221 TAWRSLLNACRIHGDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEA 280
Query: 197 LK-----------------------------------DLLERMEQE----GYVPDTKEVL 217
+ ++L +ME + GY PDT EV
Sbjct: 281 VDWGLAQSPGVSAVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVA 340
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LDV EE+K+ ++ H ++LA+ FG++ST +G +R++ NL + + ++S+I RE
Sbjct: 341 LDVGEEEKRRVVAAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGRE 400
Query: 278 MIVRDNRRFCR 288
+++RD R R
Sbjct: 401 IVIRDRNRLHR 411
>gi|224136634|ref|XP_002326908.1| predicted protein [Populus trichocarpa]
gi|222835223|gb|EEE73658.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 13/149 (8%)
Query: 154 VWLTLLSACRVHRNVELAE-------KVADMILMIEPNNTGAYVILIN-----EALKDLL 201
+W TL + +L K+ DM + NT + + E L+ L
Sbjct: 80 IWETLQKYSKARTQGQLGYPVSPPGLKLGDMKRAKDNTNTNHRRVTSDRSKAYEKLRSLS 139
Query: 202 ERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLR 261
+ + GYVPDT+ VL D+++E K+ L+YH ERLA+ +G+I+T GTT+R++KNL
Sbjct: 140 KEVRDAGYVPDTRFVLHDLDQEAKEKALFYHSERLAIAYGLINTSPGTTLRIMKNLRICG 199
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ K++SKI RE IVRDN+RF HF
Sbjct: 200 DCHNFIKILSKIEDREFIVRDNKRF-HHF 227
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 104/252 (41%), Gaps = 75/252 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML-----MAKIKARHAPFSRIMHAGSTENV---------- 154
+ + C + G ++GL++F M+ M + + AG E
Sbjct: 478 VLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCH 537
Query: 155 -----WLTLLSACRVHRNVELAEKVADMILMI---------------------------- 181
W TLLS+CRVH ++E+ + AD ++ +
Sbjct: 538 PDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLR 597
Query: 182 ----------EP-----------------NNTGAYVILINEALKDLLERMEQEGYVPDTK 214
EP + + ++ I L+ L +M +EGYVPD
Sbjct: 598 RGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMS 657
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VL DVEE +K +L +H E+LA+ FG+I P G IRVIKNL + K +SKI
Sbjct: 658 SVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKIT 717
Query: 275 HREMIVRDNRRF 286
RE++VRD RF
Sbjct: 718 QREILVRDAVRF 729
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 74/250 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-------------------MHAGSTEN 153
C G DEG +F M ++I+ ++ + M TE+
Sbjct: 327 ACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTES 386
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW LL++C +H+N ELA AD + + P ++G ++ L N
Sbjct: 387 VWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 195 -----------------------------EALKDLLER-------MEQEGYVPDTKEVLL 218
E K++ E+ ME+ GYV DT VL
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLR 506
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+V+ ++K + YH ERLA+ FG+I+ P IRV+KNL + K +S R +
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVI 566
Query: 279 IVRDNRRFCR 288
IVRDN RF R
Sbjct: 567 IVRDNNRFHR 576
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 115/279 (41%), Gaps = 82/279 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPF 142
A+ FL+ + + NS+T C +G DEG + F +M ++ K K
Sbjct: 562 AIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMV 621
Query: 143 SRIMHAGSTE---------------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ AG E +VW LL AC +H N+ELAEK +L IEP N G
Sbjct: 622 DVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHG 681
Query: 188 AYVILIN--------EALKDLLERM----------------------------------- 204
AYV+L N E + +L ++M
Sbjct: 682 AYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRD 741
Query: 205 ------------EQEGYVPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGIISTPDGTTI 251
GYV +T +L VEEE+ K+ L H E++A+ FG+I I
Sbjct: 742 IYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAI 801
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R++KNL R K+VSK+ R++++RD RF HF
Sbjct: 802 RIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRF-HHF 839
>gi|361068227|gb|AEW08425.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+I+TP T+I V KN
Sbjct: 53 LDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLINTPPWTSITVTKN 112
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SK+V RE+I+RD RF HF
Sbjct: 113 LRVCGDCHGATKFISKVVGREIIMRDANRF-HHF 145
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 56/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------EALKDLL 201
+W TLLSAC +H+N E+A++V IL I+PN++ YV+L N E K +
Sbjct: 449 IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 508
Query: 202 ER----------MEQEGYV---------------------------------PDTKEVLL 218
++ E +G V PDT VL
Sbjct: 509 DKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLH 568
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++EE+K++ L H E+LA+ F ++ P+G IR+IKNL K +S I +RE+
Sbjct: 569 DMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREI 628
Query: 279 IVRDNRRFCRHFL 291
+RD RF HF+
Sbjct: 629 TLRDGSRF-HHFI 640
>gi|190612983|gb|ACE80869.1| pentatricopeptide repeat protein [Thyrsopteris elegans]
Length = 152
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 63/96 (65%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M+ EGYVPDT VL DVEEE K+++L YH E+LA+ FG+ISTP GT +
Sbjct: 52 IYAELEKLNLQMKVEGYVPDTNLVLHDVEEELKEHLLSYHSEKLAIAFGLISTPHGTPLH 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
++KNL K +SKI RE+I+RD RF R
Sbjct: 112 IVKNLRLCSDCHTAAKFISKITEREIIMRDYNRFHR 147
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 75/254 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLM--------------------AKIKARHAPFSRIMHAG 149
+ C G DEG +F M + A + R F R M
Sbjct: 337 VLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQ 396
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W +L+SACR H +EL E + +L P + Y++L N
Sbjct: 397 PNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIR 456
Query: 195 ---------------------------------EALKD---LLERMEQE----GYVPDTK 214
KD ++E M +E G++ T
Sbjct: 457 REMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATS 516
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLLD++EE K+ L +H E+LA+ F ++ TP GT +RV+KNL K +S++
Sbjct: 517 EVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 576
Query: 275 HREMIVRDNRRFCR 288
RE++VRD RF R
Sbjct: 577 RREIVVRDRSRFHR 590
>gi|413923547|gb|AFW63479.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 490
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPF-----------SRI---------MHAGSTE 152
C + G ++GL+ F +M + A +A + R+ M G T+
Sbjct: 228 ACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTD 287
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI----------------LINEA 196
W +LL+ACR+H +++LAE+ + + N G YVI L EA
Sbjct: 288 TAWRSLLNACRIHGDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEA 347
Query: 197 LK-----------------------------------DLLERMEQE----GYVPDTKEVL 217
+ ++L +ME + GY PDT EV
Sbjct: 348 VDWGLAQSPGVSAVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVA 407
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LDV EE+K+ ++ H ++LA+ FG++ST +G +R++ NL + + ++S+I RE
Sbjct: 408 LDVGEEEKRRVVAAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGRE 467
Query: 278 MIVRDNRRFCR 288
+++RD R R
Sbjct: 468 IVIRDRNRLHR 478
>gi|413923546|gb|AFW63478.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 489
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPF-----------SRI---------MHAGSTE 152
C + G ++GL+ F +M + A +A + R+ M G T+
Sbjct: 227 ACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTD 286
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI----------------LINEA 196
W +LL+ACR+H +++LAE+ + + N G YVI L EA
Sbjct: 287 TAWRSLLNACRIHGDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEA 346
Query: 197 LK-----------------------------------DLLERMEQE----GYVPDTKEVL 217
+ ++L +ME + GY PDT EV
Sbjct: 347 VDWGLAQSPGVSAVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVA 406
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LDV EE+K+ ++ H ++LA+ FG++ST +G +R++ NL + + ++S+I RE
Sbjct: 407 LDVGEEEKRRVVAAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGRE 466
Query: 278 MIVRDNRRFCR 288
+++RD R R
Sbjct: 467 IVIRDRNRLHR 477
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 76/260 (29%)
Query: 106 SRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIK--ARHAPFSRI 145
S ++I C +G +EG KFF M L+A++ ++ F
Sbjct: 600 SFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIES 659
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
M +W LLS CR+H +V+LAEKVA+ I +EP+NT YV+L N E +
Sbjct: 660 MPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEV 719
Query: 198 KDLLERMEQEGYV------------------------PDTKE------------------ 215
K L +RM++ G+ P K+
Sbjct: 720 KKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYS 779
Query: 216 -----VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
VL++ ++ +K+ I H E+ A+ FGI++ P G T+RV KN K +
Sbjct: 780 SMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFM 839
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SK E+++RD+ RF HF
Sbjct: 840 SKTTKMEIVLRDSNRF-HHF 858
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 120/281 (42%), Gaps = 83/281 (29%)
Query: 91 IMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM--------------- 130
+ AV F E I + IT +GC +G D GLK+F M
Sbjct: 390 LQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYAC 449
Query: 131 ---LMAKIKARHAPFSRI---MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN 184
L+ + R A S++ M + ++W +LL+ACR HRN+E+AE A + ++EP
Sbjct: 450 VADLLGR-AGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 508
Query: 185 NTGAYVILIN-----------EALKDLLER-----------MEQEGYV----------PD 212
NTG YV+L N + L+ +++ +E G P
Sbjct: 509 NTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQ 568
Query: 213 TKEVLL-----------------------DVEEEQKKNILYYHGERLALVFGIISTPDGT 249
KE+ + D+ EE+K+ L H E+LA+ FGI++TP T
Sbjct: 569 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 628
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+RV KNL +S+I RE+IVRD RF HF
Sbjct: 629 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRF-HHF 668
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 89/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W +LL A RVH N+E+ E V ++ +EP +G YV+L N + +K
Sbjct: 389 IWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMK 448
Query: 199 D------------------------------------LLERM----EQEGYVPDTKEVLL 218
D LE M + G+ P T EVL
Sbjct: 449 DHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLF 508
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K++ L YH ERLA+ F +I++ IR+IKNL +K++SKI RE+
Sbjct: 509 DIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREI 568
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 569 IVRDRNRF-HHF 579
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 103/256 (40%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIM------HAG 149
+ C +G D+G++FF M M + R + M
Sbjct: 274 VLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQME 333
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ VW+ LLS CR+H NVEL E A +L + N G+Y +L N
Sbjct: 334 PSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKDVARVR 393
Query: 195 ------------------------------------EALKDLLERMEQE----GYVPDTK 214
+ + ++L + Q GYVP+T
Sbjct: 394 SLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSLTQRIKVLGYVPETS 453
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
L DV++E+K ++L+ H E+LAL +GI+ + G IR+ KNL + +S I+
Sbjct: 454 FALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVCGDCHNAITYISMII 513
Query: 275 HREMIVRDNRRFCRHF 290
E+I+RD+ RF HF
Sbjct: 514 DHEIILRDSSRF-HHF 528
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 78/251 (31%)
Query: 113 GCGQNGPFDEGLKFFGQML-----MAKIKARHAPFSRIMHAGSTENV------------- 154
GC +G +EGL F M+ + K++ + AG E+
Sbjct: 400 GCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDV 459
Query: 155 --WLTLLSACRVHRNVELAEKVADMILMIEP-NNTGAYVILIN--------EALKDLLER 203
W LLSACR+H +V+L E++ + I + P ++ G YV+L N E++ + +
Sbjct: 460 VAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKA 519
Query: 204 MEQE------------------------------------------------GYVPDTKE 215
M Q GYVP TK+
Sbjct: 520 MSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQ 579
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D+ EE K+ + +H E+LA+ FG++ST +G TIR+ KNL + K +S + +
Sbjct: 580 VLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEG-TIRITKNLRTCEDCHSAMKTISLVFN 638
Query: 276 REMIVRDNRRF 286
RE++VRD RF
Sbjct: 639 REIVVRDRSRF 649
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 77/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
I C G +EG ++F M ++ IK + AG E
Sbjct: 343 ILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIK 402
Query: 154 ----VWLTLLSACRVHRNVELAEKV------------ADMILM----------------- 180
+W TLLS+C H NVE+A+ V D +++
Sbjct: 403 PTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLR 462
Query: 181 ----------------IEPNNT----------GAYVILINEALKDLLERMEQEGYVPDTK 214
IE NN + +++ AL +L++ ++ GYVPDT
Sbjct: 463 KMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTS 522
Query: 215 EVLL-DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V D+E+E+K+ +L YH E+LA+ +G+++TP GTTIRV+KNL + K +S I
Sbjct: 523 LVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLI 582
Query: 274 VHREMIVRDNRRFCRHF 290
R++I+RD +RF HF
Sbjct: 583 FGRQIILRDVQRF-HHF 598
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 82/194 (42%), Gaps = 59/194 (30%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERM-- 204
W+ LL+AC+ H + A + A+ I +EP N YV+L + EA ++ RM
Sbjct: 592 WMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDG 651
Query: 205 -----------------------------------------------EQEGYVPDTKEV- 216
+ GYVPD V
Sbjct: 652 RGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVR 711
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L DVEE K+N + YH E LAL GIISTP GT +R+ KNL K VSK+VHR
Sbjct: 712 LRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHR 771
Query: 277 EMIVRDNRRFCRHF 290
+ VRD RR HF
Sbjct: 772 RISVRDGRRH-HHF 784
>gi|224128233|ref|XP_002320276.1| predicted protein [Populus trichocarpa]
gi|222861049|gb|EEE98591.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 51/216 (23%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNV 168
SI G NG E L+F +M M + +VW TL++ CR H ++
Sbjct: 127 SIVDMLGSNGYLVEALEFIEKMPME----------------PSVDVWETLMNLCRAHGHL 170
Query: 169 ELAEKVADMILMIEPN----NTGAYVILINEALKDLLE---------------------- 202
EL ++ A++I ++P+ + A ++ A ++LL+
Sbjct: 171 ELGDRCAELIEQLDPSRLNEQSNAGLVPKKTASQNLLDVRSRVHEYRAGDTSFPDRDRVY 230
Query: 203 --------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
+M+ GY+P T+ VL D++EE K++ L H ERLA G+++T + +RV+
Sbjct: 231 ALLRGMKAQMKDAGYIPVTRFVLHDIDEESKEDALLAHSERLATAHGLLTTAARSPLRVV 290
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL + K++SK+V R++I+RD +RF HF
Sbjct: 291 KNLRFCGDCHNAMKIISKLVGRQLIMRDAKRF-HHF 325
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W TLLSAC+ + ++AE++A+ ++ ++P+++ +YV+L N E ++
Sbjct: 338 IWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMR 397
Query: 199 ------------------------------------DLLERM----EQEGYVPDTKEVLL 218
+ LE M Q GY PD V
Sbjct: 398 EQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFH 457
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K+ L +H E+LA+ F +S P+G IRV+KNL K++SK++ RE+
Sbjct: 458 DMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREI 517
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 518 VVRDVSRF-HHF 528
>gi|357447727|ref|XP_003594139.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483187|gb|AES64390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 47/202 (23%)
Query: 118 GPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADM 177
G DE L+F +M M VW TL+++CRVH N EL + A
Sbjct: 285 GHLDEALEFIEKMPME----------------PNVEVWKTLMNSCRVHGNTELGDVKAKA 328
Query: 178 ILM-------IEPNNTGAYVI----------------------LINEALKDLLERMEQEG 208
L+ I+ N I I L+ L E+M+++G
Sbjct: 329 GLLLGENSDLIKKNEQNKLTINPKGQSRVHEFRNGDTSDPKSDKIYTLLRGLREQMKEDG 388
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y+ +T+ L D++EE K+++L H ERLA+ G+ S+P +TIRVIKN K
Sbjct: 389 YIAETRYALHDIDEEGKEDVLLAHSERLAVAKGLFSSPARSTIRVIKNFRICPDCHTALK 448
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKIV RE+I++ R C HF
Sbjct: 449 IISKIVGRELIIQAKR--CHHF 468
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 89/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W +LL A RVH N+E+ E V ++ +EP +G YV+L N + +K
Sbjct: 321 IWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMK 380
Query: 199 D------------------------------------LLERM----EQEGYVPDTKEVLL 218
D LE M + G+ P T EVL
Sbjct: 381 DHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLF 440
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K++ L YH ERLA+ F +I++ IR+IKNL +K++SKI RE+
Sbjct: 441 DIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREI 500
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 501 IVRDRNRF-HHF 511
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHA 148
++ C G D+G K+F M + + R FS +
Sbjct: 523 TVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPF 582
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNN----------------------- 185
T +W LLS CRVH N+EL AD + + P +
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARV 642
Query: 186 ---------------------TGAYVILINEA-----------LKDLLERMEQEGYVPDT 213
T + L+++ L+DL + M + GYVPDT
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDT 702
Query: 214 KEVLLDVEEE-QKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL DVE + K+++L H E++A+ FG++ P GTTIR+ KNL + + + +SK
Sbjct: 703 SFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSK 762
Query: 273 IVHREMIVRDNRRFCRHF 290
+V R++I+RD +RF HF
Sbjct: 763 VVQRDIILRDRKRF-HHF 779
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 86/289 (29%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------- 130
G RK E+ F++ D + IT C +G +EG FF M
Sbjct: 332 GDSRKALEM-----FVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGID 386
Query: 131 -------LMAKIKARHAPFSRIMHAGSTENV------WLTLLSACRVHRNVELAEKVADM 177
M + R H + + W++LL+ACR+H+N+ L +++AD
Sbjct: 387 PKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADF 446
Query: 178 ILMIEPNNTGAYVILIN------------------------------------------- 194
++ N+G Y++L N
Sbjct: 447 LVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVA 506
Query: 195 --------EALKDLLERM----EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
+ + +L++M ++ G+VP T+ VL D++E K+ L H E+LA+ FG+
Sbjct: 507 GDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLAVAFGL 566
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
IS+ G+TI+++KNL + K++SKI R+++ RD RF HF+
Sbjct: 567 ISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRF-HHFV 614
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 101/261 (38%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI----- 145
++ + C Q G +EG ++F +M M + R
Sbjct: 391 VTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLIN 450
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----EALKDL 200
M +W +LL +CRV+ NV LAE A+ + +EP N G YV+L N + + D
Sbjct: 451 EMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDG 510
Query: 201 LERMEQE---------------------------------------------------GY 209
+ R+ E G+
Sbjct: 511 VNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGF 570
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P VL DVEE++K NIL H E+LA+ G+IST GT +RVIKNL K
Sbjct: 571 APSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKF 630
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S RE+ VRD RF HF
Sbjct: 631 ISSFEQREISVRDTNRF-HHF 650
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 81/263 (30%)
Query: 108 NSIT-----AGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI--- 145
NS+T + C + G +EG +FF +L M + R
Sbjct: 565 NSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELL 624
Query: 146 ---MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------IN 194
M ++W TLL+ACR++ N+++AE+ A+ LM EP + YV L +
Sbjct: 625 INRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMW 684
Query: 195 EALKDLLERMEQEG---------------------------------------------- 208
E + + + ME G
Sbjct: 685 ENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKRE 744
Query: 209 -YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
Y+P T+ VL +V E++K+ + YH E+LA+ +G++S P G IR+ KNL +
Sbjct: 745 GYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSAS 804
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I RD RF HF
Sbjct: 805 KFISKVTGREIIARDASRF-HHF 826
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 60/226 (26%)
Query: 123 GLKFFGQMLMAKIKARHAP----FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMI 178
G+K +G M+ +A H F + +T +W TLLSAC H NVE+A++V + I
Sbjct: 367 GIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERI 426
Query: 179 L---------------------------------------------MIEPNNT------- 186
+E NN
Sbjct: 427 FELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSG 486
Query: 187 -GAYVILIN--EALKDLLERMEQEGYVPDTKEVL-LDVEEEQKKNILYYHGERLALVFGI 242
G + + + AL +L++ ++ GYVPDT V D+EEE K+ +L YH E+LA+ FG+
Sbjct: 487 DGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGL 546
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
++TP GTTIRV KNL + K++S I R++++RD +RF R
Sbjct: 547 LNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHR 592
>gi|294460181|gb|ADE75673.1| unknown [Picea sitchensis]
Length = 246
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 56/194 (28%)
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI-------------------L 192
+ VW LL AC++H N+ELAE VA+ + +E N G YV+ L
Sbjct: 43 DGVWGALLGACKIHLNIELAECVAEHLFKLESENVGYYVVLCNIYAATGKWDDVAKVRTL 102
Query: 193 INEA------------------------------------LKDLLERMEQEGYVPDTKEV 216
+NE L+ L+ +M++ GYVP+ V
Sbjct: 103 MNEKGLRKTAECSFIEVNNSVHTFHMEDRSHPQSQGIYLMLESLVGQMKEAGYVPNLDSV 162
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
+VE++ K+ +L H E+LA+ FG+I+T GT +R+ K+L + K++SK+V R
Sbjct: 163 FNNVEDDVKERMLMGHSEKLAIAFGLINTNSGTPLRITKSLRVCDDCHNAAKIISKVVER 222
Query: 277 EMIVRDNRRFCRHF 290
E+ +R RF HF
Sbjct: 223 EITLRGAHRF-HHF 235
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
I+ S+ A C G EG ++F M L+ + + I
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAE------------------------------KV 174
M +W +LL+ACR+H+NVELAE K
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 175 ADMILMIEPN--------------NTGAYVILIN-----------EALKDLLERMEQEGY 209
+ + MI N N +V LI E L +L ++ + GY
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGY 568
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
V +T V DV+EE+K+ L H E+LA+ FGI++T G+T+ V+KNL + K+
Sbjct: 569 VSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKL 628
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE +VRD +RF HF
Sbjct: 629 ISKIVDREFVVRDAKRF-HHF 648
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
I+ S+ A C G EG ++F M L+ + + I
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAE------------------------------KV 174
M +W +LL+ACR+H+NVELAE K
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 175 ADMILMIEPN--------------NTGAYVILIN-----------EALKDLLERMEQEGY 209
+ + MI N N +V LI E L +L ++ + GY
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGY 568
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
V +T V DV+EE+K+ L H E+LA+ FGI++T G+T+ V+KNL + K+
Sbjct: 569 VSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKL 628
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE +VRD +RF HF
Sbjct: 629 ISKIVDREFVVRDAKRF-HHF 648
>gi|302761976|ref|XP_002964410.1| hypothetical protein SELMODRAFT_82255 [Selaginella moellendorffii]
gi|300168139|gb|EFJ34743.1| hypothetical protein SELMODRAFT_82255 [Selaginella moellendorffii]
Length = 432
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 82/195 (42%), Gaps = 59/195 (30%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERM- 204
W+ LL+AC+ H + A + A+ I +EP N YV+L + EA ++ RM
Sbjct: 228 AWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMD 287
Query: 205 ------------------------------------------------EQEGYVPDTKEV 216
+ GYVPD V
Sbjct: 288 GRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAV 347
Query: 217 -LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
L DVEE K+N + YH E LAL GI+STP GT +R+ KNL K VSK+VH
Sbjct: 348 RLRDVEEGGKENAVPYHSEMLALGLGIVSTPAGTPLRITKNLRMCSDCHIATKFVSKLVH 407
Query: 276 REMIVRDNRRFCRHF 290
R + VRD RR HF
Sbjct: 408 RRISVRDGRRH-HHF 421
>gi|190612901|gb|ACE80828.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ A + I+ L+ L RME+ G VPDT+ VL DVEEE+K L +H E+LA+ FG+I
Sbjct: 43 DQAHAQIDDIHAELERLAGRMEKAGCVPDTQLVLHDVEEEEKMFKLSHHSEKLAIAFGLI 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
STP GTT+R+ KNL K++SKI RE+IVRD RF HF
Sbjct: 103 STPAGTTLRIYKNLRVCGDCHTSTKLISKIDGREIIVRDLNRF-HHF 148
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 197 LKDLLERMEQEGYVPDTKE-VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
L++L ERM+ GYV TK V +DVEEE K+ I+ H E+LAL FG+I+TP G TIR++K
Sbjct: 499 LRELEERMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMK 558
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
NL R K++S IV RE++VRD RF HF
Sbjct: 559 NLRMCRDCHGAFKLISDIVERELVVRDVNRF-HHF 592
>gi|357498695|ref|XP_003619636.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494651|gb|AES75854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 403
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 26/162 (16%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------INEA-------- 196
+W LL+ACR+++++E ++ +I I+PN+ G V+L NEA
Sbjct: 232 IWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARILRERNE 291
Query: 197 -------LKDLLERMEQEGYVPDTKEVLLDVE-EEQKKNILYYHGERLALVFGIISTPDG 248
L++++ +++ GYVP+ EVLLD + EE K+ L H E+LA+ FG+++T G
Sbjct: 292 IREIYSFLEEMIRKLKIAGYVPELGEVLLDFDDEEDKETTLSVHSEKLAIAFGLMNTAPG 351
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T I ++KNL K +SK+ R +IVRD R+ HF
Sbjct: 352 TPICIVKNLRVCGDCHEAIKFISKVYDRVIIVRDRMRY-HHF 392
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 55/193 (28%)
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
G+ W +LL++C+V++N L +VA+ IL +EP++ G YV+L N
Sbjct: 476 GTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKV 535
Query: 195 --------------------------------------EALKDLLERMEQ---EGYVPDT 213
+ K L E ++Q GYVP+
Sbjct: 536 RKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNF 595
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D+++E+K+ L YH E+LAL FG+I TP G TI ++KNL K++S +
Sbjct: 596 AVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVV 655
Query: 274 VHREMIVRDNRRF 286
R+++VRD RF
Sbjct: 656 TSRKIVVRDAVRF 668
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 193 INEALKDLLERMEQ-EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
I LK + ER+ Q EGY P TK++LLD+E E+K+ + H E+LA+ FG+I+T GTTI
Sbjct: 487 IQLKLKQIAERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLINTKPGTTI 546
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
RVIKNL R K+VS+I RE+I+RD RF HF
Sbjct: 547 RVIKNLRICRDCHTVAKLVSQIYSREIIMRDRVRF-HHF 584
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 108/261 (41%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI- 145
I+ S+ A C G D G +F M L+ + + I
Sbjct: 389 ITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN-------------------- 184
M +W +LL+ACR+H+NVELAE + ++P+
Sbjct: 449 KMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKD 508
Query: 185 ------------------------NTGAYVILIN-----------EALKDLLERMEQEGY 209
N +V LI E L +L ++ + GY
Sbjct: 509 VERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGY 568
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
V +T V DV+EE+K+ L H E+LA+ FGI++T G+T+ V+KNL + K+
Sbjct: 569 VSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKL 628
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE +VRD +RF HF
Sbjct: 629 ISKIVDREFVVRDAKRF-HHF 648
>gi|190612965|gb|ACE80860.1| pentatricopeptide repeat protein [Metzgeria furcata]
Length = 152
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+E L+ L E M+ GYVPD L DVEEE++ L +H E+LA+ FG+ISTP GT IR
Sbjct: 52 IHEVLRRLSEHMKSTGYVPDLTFALHDVEEEKRAVHLCHHSEKLAIAFGLISTPAGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K +SKIV RE+ VRD RF HF
Sbjct: 112 IVKNLRVCGDCHTATKFISKIVGREITVRDANRF-HHF 148
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 105/259 (40%), Gaps = 78/259 (30%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMA---KIKARHAP-----------------FSRIMHA 148
S+ A C G D+G FF M A K A+H F R M
Sbjct: 480 SLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPI 539
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EAL 197
+W LL ACR+H NVE+ + + + ++P N G YV++ N + +
Sbjct: 540 KPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEV 599
Query: 198 KDLLERM-----------------------EQEGYVPDTKEV---LLD------------ 219
+ L+ R Q P +E+ LLD
Sbjct: 600 RSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVP 659
Query: 220 --------VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVS 271
VEE++K+ IL H ERLA+ FGII+TP T + + KNL + K +S
Sbjct: 660 DYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYIS 719
Query: 272 KIVHREMIVRDNRRFCRHF 290
KI RE+IVRD+ RF HF
Sbjct: 720 KITEREIIVRDSNRF-HHF 737
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 105/260 (40%), Gaps = 75/260 (28%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMA-KIKARHAPFSRI----------------- 145
A S ++I C +G EG +FF M KI+ + ++ I
Sbjct: 820 AASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFI 879
Query: 146 --MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN------------------- 184
M ++W++LL CR+H+NV+LAEKVAD + +EP
Sbjct: 880 ESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWE 939
Query: 185 ----------------NTGAYVI--------------------LINEALKDLLERMEQEG 208
NTG I I E L D+ RM QEG
Sbjct: 940 AVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEG 999
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
+ P K L+ ++ L H +LA+ FG+++ P+G IRV KN K
Sbjct: 1000 HDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAK 1059
Query: 269 VVSKIVHREMIVRDNRRFCR 288
+SK+ +RE+I+RD+ RF R
Sbjct: 1060 FISKMCNREIILRDSSRFHR 1079
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L++L +M+ EGYV TK VL DVEEE+KK++L YH E+LA+ FGI++ P G IRV+KN
Sbjct: 647 LEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKN 706
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K +SKIV R +IVRD+ R+ HF
Sbjct: 707 LRVCEDCHNAIKHISKIVGRLIIVRDSHRY-HHF 739
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
+W TLLSAC+ + ++AE++A+ ++ ++P+++ +YV+L N E ++
Sbjct: 446 IWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMR 505
Query: 199 ------------------------------------DLLERM----EQEGYVPDTKEVLL 218
+ LE M Q GY PD V
Sbjct: 506 EQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFH 565
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K+ L +H E+LA+ F +S P+G IRV+KNL K++SK++ RE+
Sbjct: 566 DMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREI 625
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 626 VVRDVSRF-HHF 636
>gi|190612683|gb|ACE80719.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ A + I+ L+ L RME+ GYVPDT+ VL DVEEE+K L +H E+LA+ FG+I
Sbjct: 43 DQAHAQIDDIHAELERLAGRMEKAGYVPDTQLVLHDVEEEEKMFKLSHHSEKLAIAFGLI 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ST GTT+R+ KNL K++SKI RE+IVRD RF HF
Sbjct: 103 STTAGTTLRIYKNLRVCGDCHTSTKLISKIDGREIIVRDLNRF-HHF 148
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL-----INEALKDLLE---RME 205
W TLL ACR +NV+LA A IL ++P +TGAYV+L I++ D+ E M+
Sbjct: 653 TWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMK 712
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
+ G YVPDT VL
Sbjct: 713 KRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQ 772
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E EQ+++ L YH E+LA+VFGI+S P TIR+ KNL K+++++ R +
Sbjct: 773 DLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHI 832
Query: 279 IVRDNRRFCRHF 290
++RD R+ HF
Sbjct: 833 VIRDPIRY-HHF 843
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 102/250 (40%), Gaps = 74/250 (29%)
Query: 113 GCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI-------------------MHAGSTEN 153
C G +EG K+F M +I+ ++ + M TE+
Sbjct: 366 ACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTES 425
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------EALKDLL 201
VW ++ CR+H N +LA AD + + ++G +V+L N +A K L
Sbjct: 426 VWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLR 485
Query: 202 ER-------------------------------------------MEQEGYVPDTKEVLL 218
+R ME+ GYV DT VL
Sbjct: 486 DRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLR 545
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+V E+K + YH ERLA+ FG+IS P G IR++KNL + K +SK+ R +
Sbjct: 546 EVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVI 605
Query: 279 IVRDNRRFCR 288
IVRDN RF R
Sbjct: 606 IVRDNNRFHR 615
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 102/256 (39%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI------MHAG 149
+ CG +G +EG K F M M + R+ M
Sbjct: 457 VLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFE 516
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLL 201
+ +W LLSACR H NV++ E +L +E + YV+L N E + +
Sbjct: 517 ANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVR 576
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
+ ME G YVP+T
Sbjct: 577 KVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTA 636
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+V+ D++EE+K++++ YH E+LAL FG++ TIR++KNL K+VS+I
Sbjct: 637 QVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIY 696
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD RF HF
Sbjct: 697 GREITVRDTMRF-HHF 711
>gi|190612977|gb|ACE80866.1| pentatricopeptide repeat protein [Cyathea smithii]
Length = 152
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M+ EGYVPDT VL DVEEE K+++L YH E+LA+ FG+ISTP GT +
Sbjct: 52 IYAELEKLKLQMKAEGYVPDTSLVLHDVEEELKEHLLIYHSEKLAMAFGLISTPHGTPLH 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
++KNL K +SKI RE+ +RD RF R
Sbjct: 112 IVKNLRLCSDCHTAAKFISKITGREITMRDYNRFHR 147
>gi|190612913|gb|ACE80834.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L ++ME+ GYVPDT+ VL DV+EE+K N L +H E+LA+ FG++ST GT +R
Sbjct: 52 IHAELQRLSQQMEEAGYVPDTRFVLHDVDEEEKLNRLCHHSEKLAIAFGLLSTVPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K ++KI RE++VRDN RF HF
Sbjct: 112 IYKNLRVCVDCHTATKFMAKIAAREIVVRDNNRF-HHF 148
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L D+ ER+ ++GY+P T VL D+E+E+K++ L YH ERLA+ F ++ + GT IR
Sbjct: 491 IYEMLGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIR 550
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SK+ RE+IVRD RF HF
Sbjct: 551 IVKNLRVCGDCHMAIKLISKVYDREIIVRDRSRF-HHF 587
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 119/305 (39%), Gaps = 112/305 (36%)
Query: 97 FLEYCDY-AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK------------ARHAP-- 141
F E C +S SI G Q+G +E L + +M++A +K HA
Sbjct: 297 FCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLV 356
Query: 142 -----------------------------FSRIMHAGSTENV------------WLTLLS 160
FSR H EN+ W LLS
Sbjct: 357 SKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLS 416
Query: 161 ACRVHRNVELAEKVADMILMIEPNNT---------------------------------- 186
+C+ H N ++A ++AD +L ++P +
Sbjct: 417 SCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKA 476
Query: 187 ----------GAYVILINEA-----------LKDLLERMEQEGYVPDTKEVLLDVEEEQK 225
G++V E +++L E M + GY PDT VL D+++++K
Sbjct: 477 PGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEK 536
Query: 226 KNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
+ L++H ERLA+ +G++ GT IR++KNL K++S I +RE+ VRD +R
Sbjct: 537 ERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKR 596
Query: 286 FCRHF 290
+ HF
Sbjct: 597 Y-HHF 600
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI------MHA 148
++ + C G +EG ++F ML M + R FS M
Sbjct: 531 TVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPF 590
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA-------------------- 188
+ +W LL+ CR H N++L + A+ + + P + G
Sbjct: 591 EARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVART 650
Query: 189 ------------------------YVILINE-------ALKDLLER----MEQEGYVPDT 213
+V L+++ ++ + LE+ M++ GY+PDT
Sbjct: 651 RKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDT 710
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
K VL D+E E K+ L H E+LA+ FG++ P G T+RV KNL + K +SK+
Sbjct: 711 KYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKV 770
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++VRD +RF HF
Sbjct: 771 VGREIVVRDGKRF-HHF 786
>gi|414876781|tpg|DAA53912.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 878
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 75/256 (29%)
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQM----LMAKIK----------ARHAPFSRI 145
+C ++ S+ A C NG +E +K+F M M+ K R F +I
Sbjct: 216 FCPDPVTFLSVLAACSHNGLAEECMKYFDLMRYYNSMSPWKEHYSCVIDALGRAGCFDKI 275
Query: 146 ------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----- 194
M + +W ++L +CR++ N +LA A+ + + P + AYVIL N
Sbjct: 276 QKVLDEMPFEADPVIWSSILHSCRIYGNQDLATVAAENLFTMVPTDATAYVILSNIYAKA 335
Query: 195 ----------------------------------------------EALKDLLER----M 204
+ +K+ LER M
Sbjct: 336 GNWEGAARVKKIMRDRGVRKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKEELERLYEEM 395
Query: 205 EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
+++GY PDT L V+ +QK L YH ERLA+ F +I+TP GT I V+KNL +
Sbjct: 396 DKQGYEPDTSCALHMVDNKQKLESLKYHSERLAIAFALINTPPGTPITVMKNLSACLDCH 455
Query: 265 HGNKVVSKIVHREMIV 280
K++SKIV+R++I+
Sbjct: 456 AAIKMISKIVNRDIIL 471
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 81/258 (31%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAG 149
+ GC +G +EG K F M L + I M
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLL 201
S +W +L+SACR+H +EL + A IL +EP++ GA V++ N E ++++
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 202 ERMEQE-----------------------------------------------GYVPDTK 214
ME++ GYVPD
Sbjct: 571 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCG 630
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIIS------TPDGTTIRVIKNLPSLRGLRHGNK 268
VL+DVEEE+KK+++ +H E+LAL FG+++ IR++KNL K
Sbjct: 631 SVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFK 690
Query: 269 VVSKIVHREMIVRDNRRF 286
+VSK+ RE+IVRD RF
Sbjct: 691 LVSKVYEREIIVRDRTRF 708
>gi|383165816|gb|AFG65812.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165818|gb|AFG65813.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+ISTP T+I V KN
Sbjct: 53 LDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKN 112
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SK+V RE+ +RD RF HF
Sbjct: 113 LRVCGDCHRATKFISKVVGREINMRDANRF-HHF 145
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 102/256 (39%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRI------MHAG 149
+ CG +G +EG K F M M + R+ M
Sbjct: 242 VLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFE 301
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLL 201
+ +W LLSACR H NV++ E +L +E + YV+L N E + +
Sbjct: 302 ANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVR 361
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
+ ME G YVP+T
Sbjct: 362 KVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTA 421
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+V+ D++EE+K++++ YH E+LAL FG++ TIR++KNL K+VS+I
Sbjct: 422 QVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIY 481
Query: 275 HREMIVRDNRRFCRHF 290
RE+ VRD RF HF
Sbjct: 482 GREITVRDTMRF-HHF 496
>gi|190612859|gb|ACE80807.1| pentatricopeptide repeat protein [Pinus nigra]
Length = 152
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L ++MEQ GYVPDT VL DVEEE+K+++L H E+LA+ F +IST T+I + KN
Sbjct: 56 LECLSQQMEQAGYVPDTGFVLHDVEEEEKEHMLSTHSEKLAIAFALISTYPRTSIHITKN 115
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K++SKIV RE+IVRD RF HF
Sbjct: 116 LRVCGDCHNATKLISKIVKREIIVRDKSRF-HHF 148
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 76/285 (26%)
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM--------- 130
+ SG + E+ + + I+ N++ C G +EG+ +F +M
Sbjct: 286 TASGCSERALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPD 345
Query: 131 -----LMAKIKARHAPFSR------IMHAGSTENVWLTLLSACRVHRNVELAEKVADMIL 179
M + R F + +M VW L+ ACR + N EL +K ++
Sbjct: 346 IAHYGCMVDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLI 405
Query: 180 MIEP-----------------NNTGAYVI---LIN------------------------- 194
P N G Y + ++N
Sbjct: 406 EAAPNDHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGD 465
Query: 195 ----------EALKDLLERMEQEGYVPDTKEVLLDVEEEQ-KKNILYYHGERLALVFGII 243
E L ++ ++++ GY PDT +VLLD+++E K++ L H ERLAL FG+I
Sbjct: 466 KSHSRKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLI 525
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
ST GT IR++KNL + K++SKI R ++VRD RF R
Sbjct: 526 STAPGTPIRIVKNLRVCGDCHNAIKLLSKIYGRCIMVRDANRFHR 570
>gi|302765350|ref|XP_002966096.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
gi|300166910|gb|EFJ33516.1| hypothetical protein SELMODRAFT_84620 [Selaginella moellendorffii]
Length = 598
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +++EGY PDT+ L DVEEE+K +L +HGE+LA++FG++STPDG+ +
Sbjct: 491 IYAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHGEKLAIMFGLMSTPDGSPLF 550
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K+++KI R++++RD RF HF
Sbjct: 551 VLKNLRVCADCHAATKIIAKITKRKIVMRDASRF-HHF 587
>gi|190612785|gb|ACE80770.1| pentatricopeptide repeat protein [Ptilidium pulcherrimum]
Length = 152
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
M++ GYVPDT+ VL DVEEE+K+N L +H E+LA+ FG+ISTP GT +R+ NL
Sbjct: 63 MKEAGYVPDTRFVLHDVEEEKKENHLCHHSEKLAIAFGLISTPAGTPLRIFNNLRVCGDC 122
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKIV RE+I RD RF HF
Sbjct: 123 HTATKFISKIVDREIIARDGNRF-HHF 148
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI E +KDLL ++ GYVPD VL D+E+EQK + L YH E+LA+ +G++ TP G I
Sbjct: 589 LIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPI 648
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K++SK+ +R ++VRD RF HF
Sbjct: 649 TVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRF-HHF 686
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
+ LI+E L L ERM+ GYVPD VL DV+E K +L H E+LA+ FG+IST G
Sbjct: 503 LYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGM 562
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T+R+ KNL + KV+SKI RE+I+RD RF HF
Sbjct: 563 TLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRF-HHF 602
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
TLL+ACRV++N+E AE A ++ +P + GAYV L N
Sbjct: 415 TLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 452
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 104/261 (39%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------R 144
I+ ++ C G D G+++F M M + R S +
Sbjct: 365 ITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIK 424
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M ++ TLL ACR+H+N+ LAE A +L ++P YV L N
Sbjct: 425 SMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDH 484
Query: 195 -----EALKD----------------------------------------LLERMEQEGY 209
++KD L ++M+ GY
Sbjct: 485 VASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGY 544
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD + VL DV EE K+ +L +H E+LA+ FG++ P G IRV KNL K
Sbjct: 545 VPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKY 604
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S I RE+IVRD RF HF
Sbjct: 605 ISTIEGREIIVRDTTRF-HHF 624
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
M + GY PDT +L DV +EQKK +L YH E+LA+ FG+IST GT++R+IKNL
Sbjct: 783 MAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDC 842
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKI RE++VRD+ RF HF
Sbjct: 843 HTATKFISKITGREIVVRDSHRF-HHF 868
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 37/115 (32%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------MAKIKARH------------AP 141
S+ + C G +G++ F +L M + AR AP
Sbjct: 612 SVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAP 671
Query: 142 FS--RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
R++H+ T+L A +VH++VE A K A+ ++ + P+ + AYV+L N
Sbjct: 672 LKPDRVIHS--------TMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSN 718
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
M + GY PDT +L DV +EQKK +L YH E+LA+ FG+IST GT++R+IKNL
Sbjct: 783 MAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDC 842
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKI RE++VRD+ RF HF
Sbjct: 843 HTATKFISKITGREIVVRDSHRF-HHF 868
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
T+L A +VH++VE A K A+ ++ + P+ + AYV+L N
Sbjct: 681 TMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSN 718
>gi|222639882|gb|EEE68014.1| hypothetical protein OsJ_25982 [Oryza sativa Japonica Group]
Length = 594
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 28/153 (18%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
GQ G DE R APF T N+W LL+A R+HRN++LA
Sbjct: 423 GQQGRLDEAYSMI----------RKAPFI------PTANMWGALLTASRIHRNLQLARLS 466
Query: 175 ADMILMIEPNNTGAYVILIN------------EALKDLLERMEQEGYVPDTKEVLLDVEE 222
A+ +L +EP YV L+N L LL+ ++Q GYV + E+L D+
Sbjct: 467 AEQLLAMEPQKINNYVELLNLYINSGDRLRSQRKLDSLLKEIKQLGYVAEENELLPDILP 526
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
+++K YH ERLA+ FG+IST TT+RV +
Sbjct: 527 DEQKTSKVYHSERLAVAFGLISTSLSTTLRVTQ 559
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 106/257 (41%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------- 153
++ + C G D+G ++F M +M + + AG E+
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDL 200
+W TLL A RVH N ELAE AD I +EP N+G YV+L N + L
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 201 LERMEQEG------------------------YVPDTKEV-------------------- 216
RM +G + P+ E+
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 694
Query: 217 ---LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L DVEEE+K+ ++ YH ERLA+ +GI+ G IRVIKNL + K +++I
Sbjct: 695 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 754
Query: 274 VHREMIVRDNRRFCRHF 290
R +I+RDN RF HF
Sbjct: 755 TGRLIILRDNNRF-HHF 770
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 106/258 (41%), Gaps = 76/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIM----HAGSTENV--------- 154
S+ C G DEGLK+F M A I+ + +S I+ AG +
Sbjct: 351 SLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 410
Query: 155 ------WLTLLSACRVHRNVELAEKVADMILMIEPNNT-------GAYVIL--------- 192
W +LL ACR+ + EL E A ++ +EP NT G Y L
Sbjct: 411 KPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAV 470
Query: 193 ---------------------------------------INEALKDLLERMEQEGYVPDT 213
I E L++L R+++EGY+PDT
Sbjct: 471 RKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDT 530
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ ++E+ K+ IL YH ER+A+ F +IS P I V KNL K + K+
Sbjct: 531 SFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKV 590
Query: 274 VHREMIVRDNRRFCRHFL 291
R++IVRDN RF HF+
Sbjct: 591 ERRDIIVRDNSRF-HHFV 607
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 107/263 (40%), Gaps = 77/263 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------- 153
S+ A C G D+G ++F M + AK+ + AG E
Sbjct: 286 SVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPF 345
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMI-----------------------------L 179
W LL A R+H N EL EK A +I +
Sbjct: 346 EPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKM 405
Query: 180 MIEPNNTG-----AYVIL---------------------INEALKDLLERMEQEGYVPDT 213
+E N G Y L I L+++ +++QEGY+ T
Sbjct: 406 RLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISST 465
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V DVEEE+K ++L YH E+LA+ +GI+ P G IRVIKNL + K +SKI
Sbjct: 466 NLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKI 525
Query: 274 VHREMIVRDNRRFCRHFLLFRAC 296
V R +I+RDN RF H+ +C
Sbjct: 526 VGRLIILRDNHRF--HYFEGGSC 546
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 103/245 (42%), Gaps = 80/245 (32%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM----------------- 130
A+R F + I N +T C G EG +FF M
Sbjct: 345 ALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMV 404
Query: 131 -LMAKIKARHAPFSRIMHAGSTEN--VWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
L+++ H I++ N VW LL ACRVH+NVE+AE+ +L ++P N G
Sbjct: 405 DLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDG 464
Query: 188 AYVILIN---------------EALKD--------------------------------- 199
YV+L N + +KD
Sbjct: 465 YYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQ 524
Query: 200 LLERMEQ-------EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+ +R E+ +GYVP+T VLLD+EE +K + H E+LALVFG+++TP T IR
Sbjct: 525 IFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIR 584
Query: 253 VIKNL 257
++KNL
Sbjct: 585 IMKNL 589
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 124/314 (39%), Gaps = 113/314 (35%)
Query: 86 RKVFEIMAVRDFLEY-----CDYAISRN------------------------SITAGCGQ 116
R+VF++M +D + C YAI+ N ++ +GC
Sbjct: 399 RRVFDVMLTKDLASWNIMLNC-YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 457
Query: 117 NGPFDEGLKFFGQMLMAKIKARHAP-----------------------FSRIMHAGSTEN 153
G + GL F +M K + R +P M + +
Sbjct: 458 TGLTEYGLSLFERM---KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS 514
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALK 198
+W +LL++CR+H NV + E A + ++EP+N G YV++ I E +K
Sbjct: 515 IWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMK 574
Query: 199 -----------------------------------------DLLERMEQEGYVPDTKEVL 217
+L E +E+ GY P+T VL
Sbjct: 575 QRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVL 634
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV+EE K N + H ERLA + +I T +G IR+ KNL K+VS++ R
Sbjct: 635 HDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRV 694
Query: 278 MIVRDNRRFCRHFL 291
+++RD +RF HF+
Sbjct: 695 IVLRDTKRF-HHFV 707
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 86/192 (44%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
+W TLL A RVH N ELAE AD I +EP N+G YV+L N + L RM
Sbjct: 575 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 634
Query: 206 QEG------------------------YVPDTKEV-----------------------LL 218
+G + P+ E+ L
Sbjct: 635 DKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLH 694
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEEE+K+ ++ YH ERLA+ +GI+ G IRVIKNL + K ++K+ R +
Sbjct: 695 DVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLI 754
Query: 279 IVRDNRRFCRHF 290
I+RDN RF HF
Sbjct: 755 ILRDNNRF-HHF 765
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L++L M++ GYVPDT VL DV EE+K+ +L +H E+LA+ FG+++TP G+ IR
Sbjct: 331 IRAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIR 390
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL + K++S I R ++ RD RF HF
Sbjct: 391 VIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRF-HHF 427
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 106/258 (41%), Gaps = 76/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIM----HAGSTENV--------- 154
S+ C G DEGLK+F M A I+ + +S I+ AG +
Sbjct: 432 SLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 491
Query: 155 ------WLTLLSACRVHRNVELAEKVADMILMIEPNNT-------GAYVIL--------- 192
W +LL ACR+ + EL E A ++ +EP NT G Y L
Sbjct: 492 KPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAV 551
Query: 193 ---------------------------------------INEALKDLLERMEQEGYVPDT 213
I E L++L R+++EGY+PDT
Sbjct: 552 RKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDT 611
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ ++E+ K+ IL YH ER+A+ F +IS P I V KNL K + K+
Sbjct: 612 SFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKV 671
Query: 274 VHREMIVRDNRRFCRHFL 291
R++IVRDN RF HF+
Sbjct: 672 ERRDIIVRDNSRF-HHFV 688
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 124/314 (39%), Gaps = 113/314 (35%)
Query: 86 RKVFEIMAVRDFLEY-----CDYAISRN------------------------SITAGCGQ 116
R+VF++M +D + C YAI+ N ++ +GC
Sbjct: 392 RRVFDVMLTKDLASWNIMLNC-YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 117 NGPFDEGLKFFGQMLMAKIKARHAP-----------------------FSRIMHAGSTEN 153
G + GL F +M K + R +P M + +
Sbjct: 451 TGLTEYGLSLFERM---KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS 507
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALK 198
+W +LL++CR+H NV + E A + ++EP+N G YV++ I E +K
Sbjct: 508 IWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMK 567
Query: 199 -----------------------------------------DLLERMEQEGYVPDTKEVL 217
+L E +E+ GY P+T VL
Sbjct: 568 QRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVL 627
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV+EE K N + H ERLA + +I T +G IR+ KNL K+VS++ R
Sbjct: 628 HDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRV 687
Query: 278 MIVRDNRRFCRHFL 291
+++RD +RF HF+
Sbjct: 688 IVLRDTKRF-HHFV 700
>gi|242032867|ref|XP_002463828.1| hypothetical protein SORBIDRAFT_01g006970 [Sorghum bicolor]
gi|241917682|gb|EER90826.1| hypothetical protein SORBIDRAFT_01g006970 [Sorghum bicolor]
Length = 304
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
+++L ++ GYVPDT+ VL D++E+ K L YH ERLA+ FG++ST GT +RV+KN
Sbjct: 201 VRELHAQIRAAGYVPDTRHVLHDIDEDAKARALMYHSERLAIAFGLVSTSPGTPLRVMKN 260
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K+++K+ RE++VRDN+RF HF
Sbjct: 261 LRICGDCHNAVKLIAKVTGREIVVRDNKRF-HHF 293
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
+ LI+E L L ERM+ GYVPD VL DV+E K +L H E+LA+ FG+IST G
Sbjct: 552 LYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGM 611
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T+R+ KNL + KV+SKI RE+I+RD RF HF
Sbjct: 612 TLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRF-HHF 651
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
TLL+ACRV++N+E AE A ++ +P + GAYV L N
Sbjct: 464 TLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 501
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 77/254 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN-------------- 153
C G +EG ++F M ++ IK + + AG E+
Sbjct: 342 ACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTP 401
Query: 154 -VWLTLLSACRVHRNVELAEKVA------------DMILM-------------------- 180
+W LL+AC H N+ELAEKV+ D +++
Sbjct: 402 MLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVM 461
Query: 181 -------------IEPNNT----------GAYVILINEALKDLLERMEQEGYVPDTKEVL 217
IE NN + ++ AL ++++ ++ GYVPDT V+
Sbjct: 462 KDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAGYVPDTSMVV 521
Query: 218 -LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
D+ +++K+ L YH E+LA+ FG+++TP GTTIRV+KNL R K++S I R
Sbjct: 522 HADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAAKLISLIFGR 581
Query: 277 EMIVRDNRRFCRHF 290
++++RD +RF HF
Sbjct: 582 KVVLRDVQRF-HHF 594
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 193 INEALKDLLERM-EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
I L+ L RM E+EGYVPDT++V DV +++K+ +L +H E++A+ FG+I++P G+T+
Sbjct: 545 IRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTL 604
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+IKNL K+ SKI R +IVRD RF HF
Sbjct: 605 RIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRF-HHF 642
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 156 LTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+TLL C+VH +V + I+ +EP N G+YV+L N
Sbjct: 453 VTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNN 491
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 193 INEALKDLLERM-EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
I L+ L RM E+EGYVPDT++V DV +++K+ +L +H E++A+ FG+I++P G+T+
Sbjct: 637 IRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTL 696
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+IKNL K+ SKI R +IVRD RF HF
Sbjct: 697 RIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRF-HHF 734
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I GC G+ G DE +F R M +W
Sbjct: 452 DYGIKPRVEHYGCMVDLLGRAGLVDEAYQFI----------------RTMPIEPNAVIWR 495
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALKD-- 199
LLS+C VHRNV + E+ I+ + P+++G YV+L N + +KD
Sbjct: 496 ALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRG 555
Query: 200 --------------------------------------LLERMEQEGYVPDTKEVLLDVE 221
++ R++ GYVP+T +V L+VE
Sbjct: 556 IEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVE 615
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E +K+ + +H E+LA+ FG++ G TIR+ KNL K++SK+ RE++VR
Sbjct: 616 EREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVR 675
Query: 282 DNRRFCRHF 290
D F HF
Sbjct: 676 DRNIF-HHF 683
>gi|147809935|emb|CAN67095.1| hypothetical protein VITISV_016806 [Vitis vinifera]
Length = 348
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW TLL AC +H ++ L E +L +EP ++G YV+L N
Sbjct: 147 VWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTML 206
Query: 195 ---------EALKDLLERMEQ---------------------------EGYVPDTKEVLL 218
+L +L R+ + EGYVP VL
Sbjct: 207 REGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLA 266
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K+ L YH E++A+ F +I+T G IRV+KNL K++SK+ RE+
Sbjct: 267 DIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREI 326
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 327 VVRDRSRF-HHF 337
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L E+++ GYVPD + VL DVE+++K++IL H ERLA+ F +I+TP TTIR+ KN
Sbjct: 721 LTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKN 780
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SKI RE+IVRD+ RF HF
Sbjct: 781 LRVCGDCHSVTKFISKITEREIIVRDSNRF-HHF 813
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L++L M++ GYVPDT VL DV EE+K+ +L +H E+LA+ FG+++TP G+ IR
Sbjct: 262 IRAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIR 321
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL + K++S I R ++ RD RF HF
Sbjct: 322 VIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRF-HHF 358
>gi|358357238|gb|AEU08459.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L +M++ GYVPDT+ VL DVEEEQK+ L +H E+LA+ FG+IST GT +R
Sbjct: 52 IHAELRRLSGQMKEAGYVPDTRFVLRDVEEEQKEFSLCHHSEKLAISFGLISTAPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +SKI R ++VRD RF HF
Sbjct: 112 VIKNLRVCGDCHTATKFISKITGRAIVVRDANRF-HHF 148
>gi|358357234|gb|AEU08457.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+N + I+ LK L RM+ GYVPDT+ VL DVEEE+K+ L +H ERLA+ FG+I
Sbjct: 43 DNLHPRIEEIHAELKRLSRRMKDAGYVPDTQFVLHDVEEERKELSLCHHSERLAIAFGLI 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
S P IR+IKNL K +SKI RE++VRD RF HF
Sbjct: 103 SMPTAMPIRIIKNLRVCGDCHTAIKFISKIAGREIVVRDANRF-HHF 148
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHA 148
S+ C G EGL+ F M ++ + A +S I M
Sbjct: 431 SVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPF 490
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN------------------------ 184
+V+ TLL ACR+H N++L +++ I +EPN
Sbjct: 491 QPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMT 550
Query: 185 --------------------NTGAYVILINEA-----------LKDLLERMEQEGYVPDT 213
N Y + E LK L+ ++++ GYVP+T
Sbjct: 551 RASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNT 610
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+L DV ++ KK+ILY+H E++A+ FG++ T T IR+ KNL + +K VSK+
Sbjct: 611 NVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKV 670
Query: 274 VHREMIVRDNRRF 286
R ++++D RF
Sbjct: 671 FGRVLVIKDANRF 683
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 106/258 (41%), Gaps = 76/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIM----HAGSTENV--------- 154
S+ C G DEGLK+F M A I+ + +S I+ AG +
Sbjct: 581 SLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 640
Query: 155 ------WLTLLSACRVHRNVELAEKVADMILMIEPNNT-------GAYVIL--------- 192
W +LL ACR+ + EL E A ++ +EP NT G Y L
Sbjct: 641 KPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAV 700
Query: 193 ---------------------------------------INEALKDLLERMEQEGYVPDT 213
I E L++L R+++EGY+PDT
Sbjct: 701 RKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDT 760
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ ++E+ K+ IL YH ER+A+ F +IS P I V KNL K + K+
Sbjct: 761 SFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKV 820
Query: 274 VHREMIVRDNRRFCRHFL 291
R++IVRDN RF HF+
Sbjct: 821 ERRDIIVRDNSRF-HHFV 837
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI+E L L ERM++ GYVPD VL DV+E K +L H E+LA+ FG+IST G T+
Sbjct: 505 LIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTL 564
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+ KNL + KV+S I RE+I+RD RF HF
Sbjct: 565 RIFKNLRVCGDCHNAAKVISMIEDREIILRDTTRF-HHF 602
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 138 RHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
R F R M + + TLL+ACRV++N+E AE A ++ +P + GAYV L N
Sbjct: 396 RAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLAN 452
>gi|115482642|ref|NP_001064914.1| Os10g0488900 [Oryza sativa Japonica Group]
gi|113639523|dbj|BAF26828.1| Os10g0488900, partial [Oryza sativa Japonica Group]
Length = 366
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 106/258 (41%), Gaps = 76/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAK-IKARHAPFSRIM----HAGSTENV--------- 154
S+ C G DEGLK+F M A I+ + +S I+ AG +
Sbjct: 100 SLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 159
Query: 155 ------WLTLLSACRVHRNVELAEKVADMILMIEPNNT-------GAYVIL--------- 192
W +LL ACR+ + EL E A ++ +EP NT G Y L
Sbjct: 160 KPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAV 219
Query: 193 ---------------------------------------INEALKDLLERMEQEGYVPDT 213
I E L++L R+++EGY+PDT
Sbjct: 220 RKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDT 279
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ ++E+ K+ IL YH ER+A+ F +IS P I V KNL K + K+
Sbjct: 280 SFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKV 339
Query: 274 VHREMIVRDNRRFCRHFL 291
R++IVRDN RF HF+
Sbjct: 340 ERRDIIVRDNSRF-HHFV 356
>gi|367059928|gb|AEX10959.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059930|gb|AEX10960.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059932|gb|AEX10961.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059934|gb|AEX10962.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059936|gb|AEX10963.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059938|gb|AEX10964.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059940|gb|AEX10965.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059942|gb|AEX10966.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059944|gb|AEX10967.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059946|gb|AEX10968.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059948|gb|AEX10969.1| hypothetical protein 0_10719_01 [Pinus taeda]
Length = 153
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L +M++ GYVPD VL DVE+EQK+++LY+H E+LAL FG+I+T G IR+IKN
Sbjct: 50 LERLSGQMKEAGYVPDKNFVLHDVEDEQKEHVLYHHSEKLALAFGLINTSPGNPIRIIKN 109
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SKIV RE VRD RF HF
Sbjct: 110 LRVCGDCHSAIKFISKIVVREFFVRDATRF-HHF 142
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 82/280 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM--------------LMA 133
A++ F E + I N +T C G ++G + FG M MA
Sbjct: 328 AIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMA 387
Query: 134 KIKARHAPFSRIMHAGSTE------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R + + T VW LL A +H N ++AE + + +EP+N G
Sbjct: 388 DLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLG 447
Query: 188 AYVIL-----------------------------------------------------IN 194
Y++L IN
Sbjct: 448 NYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEIN 507
Query: 195 E---ALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
E AL DLL+R++ GY P V D+++E K+ +L H E+LAL +G++ST G+TI
Sbjct: 508 EIKKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLLSTDAGSTI 567
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
+++KNL SK+ R++IVRDN RF HFL
Sbjct: 568 KIMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRF-HHFL 606
>gi|190612853|gb|ACE80804.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M++ GY+P+T VL DVEEEQK++IL YH E+LA+ FG+++T T +R
Sbjct: 52 IYAELERLSGQMKEGGYLPNTNFVLHDVEEEQKEHILCYHSEKLAIAFGLLNTSPNTPVR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K +SKIV RE++VRD +RF HF
Sbjct: 112 IVKNLRVCGDCHSATKFISKIVAREIVVRDAKRF-HHF 148
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 82/274 (29%)
Query: 97 FLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM-LMAKIKARHAPFS------- 143
F CD NS+T C + DEG +F +M L+ I+ + +
Sbjct: 460 FWMKCD-GFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLG 518
Query: 144 ------------RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI 191
+ M +W ++LSACRVH+NV+LA+ A +L +EP YV
Sbjct: 519 RSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQ 578
Query: 192 LIN-----------EALKDLLER------------------------------------- 203
+ N ++ L+E+
Sbjct: 579 MYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVM 638
Query: 204 -------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
++ GY P T ++ +DV+EE+K+ L H E+LA+ FG++S + +IKN
Sbjct: 639 MEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKN 698
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K++S++ +RE+IVRD RF HF
Sbjct: 699 LRVCEDCHSAIKLISRLWNREIIVRDRSRF-HHF 731
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 101/249 (40%), Gaps = 77/249 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM-----LMAKI----------------KARHAPFSRIMHAGST 151
C G DEG +F +M ++ KI K H F + M
Sbjct: 206 ACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE-FIQNMPMQPN 264
Query: 152 ENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------- 194
VW TLL AC +H ++ L E +L +EP ++G YV+L N
Sbjct: 265 AVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRT 324
Query: 195 -----------EALKDLLERMEQ---------------------------EGYVPDTKEV 216
+L +L R+ + EGYVP V
Sbjct: 325 MLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNV 384
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
L D+EEE+K+ L YH E++A+ F +I+T G IRV+KNL K++SK+ R
Sbjct: 385 LADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDR 444
Query: 277 EMIVRDNRR 285
E++VRD R
Sbjct: 445 EIVVRDRSR 453
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W +LL AC++H NVELAE A ++ IEP N +Y++L N
Sbjct: 470 IWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLN 529
Query: 195 -------------EALKDLLERMEQEGYVPDTKEV-----------------------LL 218
E + E + + + P +E+ L
Sbjct: 530 GKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQ 589
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R K++SKI RE+
Sbjct: 590 EMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREI 649
Query: 279 IVRDNRRFCRHF 290
+ RD RF HF
Sbjct: 650 VARDRTRF-HHF 660
>gi|302824756|ref|XP_002994018.1| hypothetical protein SELMODRAFT_138073 [Selaginella moellendorffii]
gi|300138121|gb|EFJ04900.1| hypothetical protein SELMODRAFT_138073 [Selaginella moellendorffii]
Length = 335
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 57/205 (27%)
Query: 143 SRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------- 194
+ +M + VW++L+ ACR + + E + A ++ + P GAY+++ N
Sbjct: 122 TSMMPCAPDDIVWMSLVGACRNYGDWERGRRAAQRVMELNPAYVGAYILMSNMYAAQGRW 181
Query: 195 ---EALKDLLER--------------------------------------------MEQE 207
+++L+ R ++
Sbjct: 182 DDAAGVRELMARRGLAKEAGWSSIEVRNKVHVFTAKDCSHPKSEAIYAELHRLALLLKGA 241
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII-STPDGTTIRVIKNLPSLRGLRHG 266
GYVP+T VL DVEEE K+ +L+ H E+LA+ FG++ ST +T+R+IKNL +
Sbjct: 242 GYVPNTSLVLQDVEEELKEQLLFCHSEKLAIAFGVVSSTKPRSTLRIIKNLRMCGDCHNA 301
Query: 267 NKVVSKIVHREMIVRDNRRFCRHFL 291
K++S I+ RE++VRD +RF HFL
Sbjct: 302 FKLLSSILEREIVVRDTKRF-HHFL 325
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 80/263 (30%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKI----KARHAPF 142
IS ++ C +G DEG ++F M L+ + +AR
Sbjct: 532 ISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARD--L 589
Query: 143 SRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA-------------- 188
+ M T ++W +LS CR ++EL AD + + P + G
Sbjct: 590 IKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCW 649
Query: 189 ------------------------------YVILINEA-----------LKDLLERMEQE 207
+V L+ + L+ + +M +
Sbjct: 650 VDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKL 709
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
GYVPDTK VL D+E QK++IL+ H ERLA+ FG+++ P G T+ V+KNL
Sbjct: 710 GYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAI 769
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
+SK V RE++VRD RRF HF
Sbjct: 770 MFMSKAVGREIVVRDVRRF-HHF 791
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 86/289 (29%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAP 141
+G ++ E+ ++ + + I+ + C G D+G ++F +M K +
Sbjct: 299 NGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM-----KEDYGI 353
Query: 142 FSRIMH----------AGSTEN---------------VWLTLLSACRVHRNVELAEKVAD 176
RI H AG E VW TLL +C +H+ +EL + +
Sbjct: 354 SPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWE 413
Query: 177 MILMIEPNNTGAYVILIN------------------------------------------ 194
++ ++P ++G YV+L N
Sbjct: 414 RLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFV 473
Query: 195 ---------EALKDLLERMEQ----EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFG 241
E + ++L + + EGY+P T VL D+EEE+K+ L YH ERLA+ F
Sbjct: 474 MGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFA 533
Query: 242 IISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++ + G IR+IKNL ++SK+ RE+IVRD RF HF
Sbjct: 534 LLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRF-HHF 581
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 106/249 (42%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I GC G+ G E KF +M M +AP +W
Sbjct: 375 DYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKP----NAP------------IWG 418
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLL---- 201
LL ACR+H+N E+AE+ ++ ++P ++G YV+L N E ++ ++
Sbjct: 419 ALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERG 478
Query: 202 --------------------------------ERMEQE--------GYVPDTKEVLLDVE 221
ERM +E GY + + L D++
Sbjct: 479 VVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDID 538
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EE+K++ ++ H E+LA+ + I+ T IR++KNL K++SK+ RE+IVR
Sbjct: 539 EEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVR 598
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 599 DRNRF-HHF 606
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 75/258 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
+++ S+ + C +G +EG F M M + R F
Sbjct: 417 SVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFI 476
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------E 195
M + W LL ACR+HR ELAE+VA +L +E + +G YV+L N E
Sbjct: 477 NNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWE 536
Query: 196 ALKDLLERMEQEG----------------------------------------------- 208
+K +M ++G
Sbjct: 537 MVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELG 596
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD + VL DV++E K+ +L H E+LA+VFG++++ +G IR+ KN+ +K
Sbjct: 597 YVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASK 656
Query: 269 VVSKIVHREMIVRDNRRF 286
+S I R++I+RD +RF
Sbjct: 657 FISLITRRKIIMRDVKRF 674
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQ---MLMAKIKARHA-----------------PFSRIMHAG 149
+ C G EG K F + + ++K+ H F R+M
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI------------------ 191
+W ++L ACRV+ N+EL E+ A +L +EP N G Y++
Sbjct: 449 PDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVR 508
Query: 192 -LINEA------------------------------------LKDLLERMEQEGYVPDTK 214
L+NE L+ + E+++ GYV DT
Sbjct: 509 ELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTS 568
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLL++++ +K+ + H E+LAL +G++ + G I ++KNL K+VSKI
Sbjct: 569 EVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIY 628
Query: 275 HREMIVRDNRRFCRHF 290
R++ +RD RF HF
Sbjct: 629 QRQITLRDRNRF-HHF 643
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 57/201 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------INEA 196
MH +W LLSAC++H++ E+ E+V ++ ++PN+ G +V+L NEA
Sbjct: 399 MHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEA 458
Query: 197 ----------------------------------------------LKDLLERMEQEGYV 210
L +++ +++ GY+
Sbjct: 459 RTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYI 518
Query: 211 PDTKEVLLDVEE-EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P++ EVLLD+++ E ++ L H E+LA+ FG+++T T IR++KNL K
Sbjct: 519 PESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKF 578
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD R+ HF
Sbjct: 579 ISKVYDREIIVRDRIRY-HHF 598
>gi|302812506|ref|XP_002987940.1| hypothetical protein SELMODRAFT_25177 [Selaginella moellendorffii]
gi|300144329|gb|EFJ11014.1| hypothetical protein SELMODRAFT_25177 [Selaginella moellendorffii]
Length = 312
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 57/205 (27%)
Query: 143 SRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------- 194
+ +M + VW++L+ ACR + + E + A ++ + P GAY+++ N
Sbjct: 99 TSMMPCAPDDIVWMSLVGACRNYGDWERGRRAAQRVMELNPAYVGAYILMSNMYAAQGRW 158
Query: 195 ---EALKDLLER--------------------------------------------MEQE 207
+++L+ R ++
Sbjct: 159 DDAAGVRELMARRGLAKEAGWSSIEVRNKVHVFTAKDCSHPKSEAIYAELHRLALLLKDA 218
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII-STPDGTTIRVIKNLPSLRGLRHG 266
GYVP+T VL DVEEE K+ +L+ H E+LA+ FG++ ST +T+R+IKNL +
Sbjct: 219 GYVPNTSLVLQDVEEELKEQLLFCHSEKLAIAFGVVSSTKPRSTLRIIKNLRMCGDCHNA 278
Query: 267 NKVVSKIVHREMIVRDNRRFCRHFL 291
K++S I+ RE++VRD +RF HFL
Sbjct: 279 FKLLSSILEREIVVRDTKRF-HHFL 302
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 114/274 (41%), Gaps = 81/274 (29%)
Query: 97 FLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM--------------LMAKIKA 137
F + D + NS+T +GC + DEGL F M M + +
Sbjct: 401 FNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLS 460
Query: 138 RHA------PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI 191
R F R M T W LL ACRV++NVEL A + IEP+N G YV+
Sbjct: 461 RAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVL 520
Query: 192 LIN-----------------------------------------------EALKDLLER- 203
L N KD++ R
Sbjct: 521 LSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRF 580
Query: 204 -------MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
M +GY P+T VL +V++EQ++ L H ERLA+ FGI+++ TT+RV KN
Sbjct: 581 LDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKN 640
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K+++KIV ++IVRD+ RF HF
Sbjct: 641 LRICGDCHNAIKLIAKIVGMQIIVRDSLRF-HHF 673
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 88/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
W TLL ACRVHRNV+LA A I+ +EP + G Y++L N E + ++ + M
Sbjct: 422 TWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMT 481
Query: 206 QEG-----------------------------------------------YVPDTKEVLL 218
G YVPDT VL
Sbjct: 482 NRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQ 541
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E EQK++ L YH E+LA++FG+++ T+R+ KNL KVVS++ HR +
Sbjct: 542 DLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSI 601
Query: 279 IVRDNRRFCRHF 290
++RD R+ HF
Sbjct: 602 VIRDPIRY-HHF 612
>gi|361066651|gb|AEW07637.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158059|gb|AFG61375.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158063|gb|AFG61377.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158065|gb|AFG61378.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158067|gb|AFG61379.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158069|gb|AFG61380.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158071|gb|AFG61381.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158073|gb|AFG61382.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158075|gb|AFG61383.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158077|gb|AFG61384.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158079|gb|AFG61385.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158081|gb|AFG61386.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158083|gb|AFG61387.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158085|gb|AFG61388.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158087|gb|AFG61389.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158089|gb|AFG61390.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
Length = 110
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 200 LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPS 259
L +M+ EGYVP+T VL DV++EQK+ IL YH E+LA+ FG+IST IRV+KNL
Sbjct: 10 LAVQMKAEGYVPNTGLVLHDVDDEQKECILSYHSEKLAIAFGLISTAPDKVIRVVKNLRV 69
Query: 260 LRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKIV RE+IVRD RF HF
Sbjct: 70 CIDCHTATKFISKIVGREIIVRDANRF-HHF 99
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMIL---------------MIEPNNTGAYVILINEALK 198
VW TLLSACR+H+++E A+ ++ ++ M NN + ++K
Sbjct: 533 VWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMK 592
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
+ L+ER+++ GY T V+
Sbjct: 593 ERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVH 652
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEEQ++ L +H E+LA+ FGIISTP GT +R+ KNL K +++ RE+
Sbjct: 653 DIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREI 712
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 713 VVRDLYRF-HHF 723
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 77/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVWL--- 156
I+ S+ + C +G DEGL+ F M L + A + AG + W
Sbjct: 552 ITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIE 611
Query: 157 ------------TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
+L AC++H+N+E+ EK A + + P+ G +V+L N
Sbjct: 612 NMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSK 671
Query: 197 LKDLLERMEQEG-----------------------------------------------Y 209
+ ++ + ME++G Y
Sbjct: 672 VAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGY 731
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPDT ++LDVE++ ++ +L H E+LA+ FG+++T GTTI V KNL + K
Sbjct: 732 VPDT-NLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKY 790
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S + RE+IVRD +RF HF
Sbjct: 791 ISLVTGREIIVRDMQRF-HHF 810
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 97/240 (40%), Gaps = 76/240 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G E KF +M M E VW LL ACRVH N ++
Sbjct: 458 GRAGKVKEAYKFIQEMPME----------------PNERVWGALLGACRVHSNTDIGLLA 501
Query: 175 ADMILMIEPNNTGAYV--------------------ILINEALKD--------------- 199
AD + + P +G YV I+ ++ LK
Sbjct: 502 ADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 561
Query: 200 --------------------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
L+++M++ GYVPD++ L DVEEE K+ L H E+LA+V
Sbjct: 562 FLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIV 621
Query: 240 FGIISTPD---GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
F +++T + IR+ KNL K++S+I RE+I+RD RF H F C
Sbjct: 622 FALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRF--HVFRFGVC 679
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 114/293 (38%), Gaps = 82/293 (27%)
Query: 73 GVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQM-- 130
+ G+ G K+ EI ++ A+ SI C G ++GLKFF M
Sbjct: 162 AIHGMAEEALGLFHKMLEIKEIKP------DAVVFTSILLACSHVGLVEDGLKFFKSMQK 215
Query: 131 ------------LMAKIKARHAPFS------RIMHAGSTENVWLTLLSACRVHRNVELAE 172
+ + R F R+M VW LSAC H N+EL E
Sbjct: 216 DFGIVPSVEHYMCLVDLLGRAGQFELALKTIRVMPVKLQAQVWAPFLSACTKHCNLELGE 275
Query: 173 KV------------ADMILM---------------------------------------- 180
A+ +LM
Sbjct: 276 LAARKLLYMNPGSHANYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAPGWSQVEINGSV 335
Query: 181 ---IEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLA 237
I + + I I + L+++ ++ + GYVP+T V+ D+E E+K+ L H ERLA
Sbjct: 336 HVFIAGDRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLEREEKEEALKVHSERLA 395
Query: 238 LVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ FG+IST G+T+R++KN + K +SKI R +IVRD RF HF
Sbjct: 396 IAFGLISTEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRDGSRF-HHF 447
>gi|358347047|ref|XP_003637574.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503509|gb|AES84712.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 753
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 63/228 (27%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNV 168
S+ G G DE L+F +M M + VW TL+++CRVH N
Sbjct: 465 SVVDMIGSIGNLDEALEFIEKMPME----------------PSVEVWETLMNSCRVHGNT 508
Query: 169 ELAEKVADMILMIEPN--NTGAYVILI--------------------------------- 193
EL ++ A+++ ++P+ N + V L+
Sbjct: 509 ELGDRCAELVEKLDPSRLNEKSKVCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRA 568
Query: 194 -------NEALKDLLER----MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
N + LL R M++ GY+ +T+ L DV++E K++ L H ERLA+ G+
Sbjct: 569 GDTSLPENNMIYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGL 628
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+++P +TIRVIKNL K++S +V RE I+RD +RF HF
Sbjct: 629 LNSPARSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRF-HHF 675
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 99/231 (42%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE +K +M H P W LL ACRVH+NV+LA
Sbjct: 362 GRAGKLDEAVKLIHEM-------NHEP---------DAVTWRILLGACRVHKNVDLAIYA 405
Query: 175 ADMILMIEPNNTGAYVILIN---------------------------------------- 194
A IL ++P + G Y++L N
Sbjct: 406 AKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHA 465
Query: 195 -----------EALKDLLERMEQE----GYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
E +K L ++ Q GYVPDT VL D+E EQ ++ L YH E+LA+V
Sbjct: 466 FILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIV 525
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG++S P+ TI + KNL K+VS++ +R +++RD R+ HF
Sbjct: 526 FGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRY-HHF 575
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 75/255 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE------------- 152
+ C +G EG + F M I+ H +S ++ AG
Sbjct: 409 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 468
Query: 153 --NVWLTLLSACRVHRNVELAE-------------------------------KVADMIL 179
+VW LLSAC++HR V L E +VA++ L
Sbjct: 469 GVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRL 528
Query: 180 MIEPN----NTGAYVILIN--------------------EALKDLLERMEQEGYVPDTKE 215
M+ + G I IN E L L +R++ GYVP +
Sbjct: 529 MMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMES 588
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D+ E+ + L +H ERLA+ +GIIST GTT+R+ KNL + K++SK+V
Sbjct: 589 VLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVD 648
Query: 276 REMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 649 REIIIRDAKRF-HHF 662
>gi|383158061|gb|AFG61376.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
Length = 110
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 200 LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPS 259
L +M+ EGYVP+T VL DV++EQK+ IL YH E+LA+ FG+IST IRV+KNL
Sbjct: 10 LAVQMKAEGYVPNTGLVLHDVDDEQKECILSYHSEKLAIAFGLISTTPDKVIRVVKNLRV 69
Query: 260 LRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKIV RE+IVRD RF HF
Sbjct: 70 CIDCHTATKFISKIVGREIIVRDANRF-HHF 99
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 60/96 (62%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L M++ GYVPDT L D+E+E+K + ++YH E++AL FG+I+ P G IR
Sbjct: 577 IQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIR 636
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K +S+IV RE+IVRDN RF R
Sbjct: 637 ITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHR 672
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 101/258 (39%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML---------------------MAKIKARHAPFSRIMH 147
S+ C G +EG K F M ++K S
Sbjct: 520 SVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 579
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNN---------------------- 185
+ VW LL AC VH++ +LA+ + + ++P N
Sbjct: 580 SAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAV 639
Query: 186 ------------TGAYVIL---------------------INEALKDLLERMEQEGYVPD 212
T Y ++ I L+ L +M + GY P+
Sbjct: 640 VRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPE 699
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T+ L DVEEE+K++++ H E+LA+ FG++ST GT IR+IKNL + K +SK
Sbjct: 700 TEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISK 759
Query: 273 IVHREMIVRDNRRFCRHF 290
+ R ++VRD RF HF
Sbjct: 760 VTQRLIVVRDASRF-HHF 776
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L+E M++EGY PDT L +V+EE K L YH ERLA+ F +I+TP+G+ I
Sbjct: 712 IRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPII 771
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + KV+SKIV RE+ VRD+ RF HF
Sbjct: 772 IMKNLRACVDCHAAIKVISKIVGREITVRDSSRF-HHF 808
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L++L +M++EGYV TK VL DVEEE+K ++L YH E+LA+ FGI++ P G IRVIKN
Sbjct: 663 LEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKN 722
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K +SKIV R +I+RD+ RF HF
Sbjct: 723 LRVCEDCHNAMKHISKIVGRLIILRDSHRF-HHF 755
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I+ NS C G+ G D+ Q LM ++ PF W
Sbjct: 524 DYGITANSKHYTCMIDLLGRAGRLDDA-----QNLM-----KNMPFE------PDAATWG 567
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
LL A R+H N EL EK A MI +EP+N+G YV+L N
Sbjct: 568 ALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSN 605
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------RIMHAG 149
+ C +G D+G+ +F M M + +R R M
Sbjct: 606 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 665
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
T VW+ LLSACRV+ NVEL E A+ +L +E N G+Y +L N
Sbjct: 666 PTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIR 725
Query: 195 ------------------------------------EALKDLL----ERMEQEGYVPDTK 214
+ + DLL +R++ GYVPD +
Sbjct: 726 YLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNR 785
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
L DV++E+K ++L H E+LAL +GI++T G IR+ KNL + +S I+
Sbjct: 786 FALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIII 845
Query: 275 HREMIVRDNRRFCRHF 290
E+IVRD+ RF HF
Sbjct: 846 EHEIIVRDSSRF-HHF 860
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 75/255 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE------------- 152
+ C +G EG + F M I+ H +S ++ AG
Sbjct: 394 LLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKP 453
Query: 153 --NVWLTLLSACRVHRNVELAE-------------------------------KVADMIL 179
+VW LLSAC++HR V L E +VA++ L
Sbjct: 454 GVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRL 513
Query: 180 MIEPN----NTGAYVILIN--------------------EALKDLLERMEQEGYVPDTKE 215
M+ + G I IN E L L +R++ GYVP +
Sbjct: 514 MMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMES 573
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D+ E+ + L +H ERLA+ +GIIST GTT+R+ KNL + K++SK+V
Sbjct: 574 VLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVD 633
Query: 276 REMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 634 REIIIRDAKRF-HHF 647
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 79/257 (30%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML----MAKIKARHAPFSRIM-HAGSTEN---------- 153
SI + CG G +EG F M ++ +A F ++ AG E+
Sbjct: 845 SIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPF 904
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------- 192
VW +LL C++ + EL E+ A IL ++P+N+ A+V+L
Sbjct: 905 EDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVD 964
Query: 193 ----INEALKD-------------------------------LLERME----QEGYVPDT 213
++E +K+ +L+++E + GY D
Sbjct: 965 RKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADK 1024
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
LDVE+E K+ L YH ER+A+ FG+I+TP TT++++KNL K +S +
Sbjct: 1025 G---LDVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMV 1081
Query: 274 VHREMIVRDNRRFCRHF 290
+ RE+IVRD+ RF HF
Sbjct: 1082 MGREIIVRDSLRF-HHF 1097
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L ++ RM+Q+GYV +T EV DVEEE+K+ L +H E+LA+ FG+I P IR
Sbjct: 437 IHAKLAEISARMQQQGYVTETAEVFYDVEEEEKEQALGHHSEKLAIAFGLIGGPPNVAIR 496
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+VS+I H E++VRD RF HF
Sbjct: 497 IVKNLRFCADCHKFAKLVSQIYHWEIVVRDRARF-HHF 533
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS------RIMHAG 149
+ C +G D+G+ +F M M + +R R M
Sbjct: 587 VLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 646
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
T VW+ LLSACRV+ NVEL E A+ +L +E N G+Y +L N
Sbjct: 647 PTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIR 706
Query: 195 ------------------------------------EALKDLL----ERMEQEGYVPDTK 214
+ + DLL +R++ GYVPD +
Sbjct: 707 YLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNR 766
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
L DV++E+K ++L H E+LAL +GI++T G IR+ KNL + +S I+
Sbjct: 767 FALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIII 826
Query: 275 HREMIVRDNRRFCRHF 290
E+IVRD+ RF HF
Sbjct: 827 EHEIIVRDSSRF-HHF 841
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV--------------------ILI 193
VW +L AC++H+N +L +VA+ ++ EP N G YV ++I
Sbjct: 381 VWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMI 440
Query: 194 NEALK-----------------------------------DLLERMEQEGYVPDTKEVLL 218
LK +L+ R + GY P + +
Sbjct: 441 QRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMH 500
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
++E E+++ L YH E+LA+ FG++ T DG T+R++KNL K +S +++RE+
Sbjct: 501 ELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREI 560
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 561 IVRDKLRF-HHF 571
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 89/203 (43%), Gaps = 57/203 (28%)
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL-----INEALK 198
+ M T VW LL ACR+H N E+ E A+ +L ++ +N G YV++ N K
Sbjct: 623 KSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWK 682
Query: 199 DLLE-RMEQEG------------------------------------------------- 208
D+ E RM +G
Sbjct: 683 DVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREG 742
Query: 209 -YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
YV TK VL +V EE+K +LY H ERLA+ +G+++T +GT IRV KNL
Sbjct: 743 GYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFC 802
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
+VS+ RE+IVRD RF HF
Sbjct: 803 TLVSRFFERELIVRDASRF-HHF 824
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 89/308 (28%)
Query: 63 GRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDE 122
GR V + + + GL + +G ++ E+ ++ + + I+ + C G D+
Sbjct: 971 GRTV-VSWTSLIVGL--AANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDD 1027
Query: 123 GLKFFGQMLMAKIKARHAPFSRIMH----------AGSTEN---------------VWLT 157
G ++F +M K + RI H AG E VW T
Sbjct: 1028 GFRYFDRM-----KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRT 1082
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------------- 194
LL +C +H+ +EL + + ++ ++P ++G YV+L N
Sbjct: 1083 LLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRV 1142
Query: 195 ----------------------------EALKDLLERMEQ----EGYVPDTKEVLLDVEE 222
E + ++L + + EGY+P T VL D+EE
Sbjct: 1143 RKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEE 1202
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
E+K+ L YH ERLA+ F ++ + G IR+IKNL ++SK+ RE+IVRD
Sbjct: 1203 EEKETALNYHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRD 1262
Query: 283 NRRFCRHF 290
RF HF
Sbjct: 1263 RSRF-HHF 1269
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 55/187 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERMEQ 206
W TLLS+CR + N+++ + A+ ++ ++P+NT +YV+L + E + L + M
Sbjct: 548 WATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRD 607
Query: 207 EG-----------------------------------------------YVPDTKEVLLD 219
+G YVPD VL D
Sbjct: 608 KGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHD 667
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
V + +K +L +H E+LA+ FG++ P G IRV+KNL + K +SKI +RE++
Sbjct: 668 VGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREIL 727
Query: 280 VRDNRRF 286
VRD RF
Sbjct: 728 VRDTARF 734
>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Brachypodium distachyon]
Length = 515
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 71/227 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE ++ Q M K+ A VW LL ACR HRN ELAE+
Sbjct: 291 GRAGRLDEAMELLDQSTM-KLDA---------------TVWKALLGACRTHRNAELAERA 334
Query: 175 ADMILMIEPNNTGAYVILIN---------------------------------------- 194
A+M+ ++P + Y++L N
Sbjct: 335 AEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTLMKSRGIAKEPGCSWVVASGVTHL 394
Query: 195 ------------EALKDLLERMEQ---EGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
E + + E ME+ EG+V DT L D E ++ L +H ERLA+
Sbjct: 395 FYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVADTDWALQDEAPEGREKGLAHHSERLAVA 454
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
FG+++ P G +RV KNL K+V+K+ RE+I+RD+ F
Sbjct: 455 FGLLALPAGAPVRVFKNLRVCGDCHVAIKMVAKVYGREIILRDSNCF 501
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 75/259 (28%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI----- 145
++ + + C +G +EG +F M M + R S
Sbjct: 1021 VTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIE 1080
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELA--------------------------------- 171
M ++W +LL ACR+H N++LA
Sbjct: 1081 NMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNE 1140
Query: 172 -EKVADMILMIEPNNTGAYVIL---------------------INEALKDLLERMEQEGY 209
EKV M+ N + ++ + L++L M+ GY
Sbjct: 1141 VEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 1200
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP T VL D+EEE K+ L YH ERLA+ FG+I+T GTT+R+ KNL + K+
Sbjct: 1201 VPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKL 1260
Query: 270 VSKIVHREMIVRDNRRFCR 288
+SKIV+R ++VRD RF R
Sbjct: 1261 ISKIVNRVILVRDMHRFHR 1279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHA------ 148
SI + C G +EGLK F +M +M + R + M
Sbjct: 515 SILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPI 574
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+ +VW LL ACR+H N+E+ E A + ++P++ G Y++L N
Sbjct: 575 PAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSN 620
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 75/260 (28%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFS-----RI 145
I+ S+ A C G EG +F +M M + R +
Sbjct: 286 ITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCMVDLLGRAGYLXCYGLIKE 345
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV----ILINEALKDLL 201
M+A +W +LL ACR+H+NVEL E A + ++ +N G YV I + D +
Sbjct: 346 MNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNCGYYVLLSNIYADAGRWDEV 405
Query: 202 ERM---------------------------------------------------EQEGYV 210
ERM ++ GY+
Sbjct: 406 ERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHEKIYEYLDKXNVKLQELGYM 465
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P+ VL DV+EE+K +L H E+LA+ FGI+++ G+ I +IKNL K++
Sbjct: 466 PNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSIIHIIKNLRICGDCNVVIKLI 525
Query: 271 SKIVHREMIVRDNRRFCRHF 290
K+V+RE++VRD++RF HF
Sbjct: 526 FKVVNREIVVRDSKRF-HHF 544
>gi|358357196|gb|AEU08438.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I LK L +M++ GYVPDT+ LLDVEE+QKK L +H E+LA+ FG+I+T GT I
Sbjct: 52 IYAELKRLSGQMQEAGYVPDTRFGLLDVEEDQKKISLCHHSEKLAIAFGLINTAPGTPIH 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K +SKIV R ++VRD RF HF
Sbjct: 112 VVKNLRVCGECHTATKFISKIVGRAVVVRDANRF-HHF 148
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 109/259 (42%), Gaps = 79/259 (30%)
Query: 108 NSITAGCGQNGPFDEGLKFFGQML-MAKIKARHAPFSRI-------------------MH 147
N +TA C +G +EG +F M+ + I+ R F + M
Sbjct: 363 NLLTA-CAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMP 421
Query: 148 AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EA 196
V TLL AC+ HRN+EL E++ ++ +EPNN+G YV+L N
Sbjct: 422 VSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAK 481
Query: 197 LKDLLE-----------RMEQEGYV----------PDTKEVLLDV--------------- 220
++ L++ +E +G V P KE+ V
Sbjct: 482 VRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVAD 541
Query: 221 -----------EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
EEE +N LYYH E+LA+ FG+ T G T+R++KNL H K+
Sbjct: 542 TNGVLHGHDFDEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKL 601
Query: 270 VSKIVHREMIVRDNRRFCR 288
+S + RE+IVRD RF R
Sbjct: 602 ISTVFDREIIVRDRTRFHR 620
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 117/317 (36%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF- 142
+ +K+F M RD +S SI G Q+G +E L + +ML +K F
Sbjct: 291 AAKKIFGRMVQRDI-------VSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFV 343
Query: 143 ------------------------------------------SRIMHAGSTENV------ 154
SR H EN+
Sbjct: 344 GLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPF 403
Query: 155 ------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
W LLSAC HRN + +VAD +L ++P + Y++L N
Sbjct: 404 KPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKV 463
Query: 195 -------------------------------------EALKDLLERMEQE----GYVPDT 213
E + LLE ++ E GY+PDT
Sbjct: 464 RRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDT 523
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL D+E+++K+ L++H ERLA+ +G++ G + ++KNL K +S I
Sbjct: 524 SSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISII 583
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++VRD R+ HF
Sbjct: 584 VKREIVVRDANRY-HHF 599
>gi|376338373|gb|AFB33718.1| hypothetical protein 2_9455_01, partial [Pinus cembra]
Length = 156
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L +M++ GY+PDT VL DVEEEQKK++L +H E+LA+ FG+I+TP T+I V KN
Sbjct: 53 LDALAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLINTPPWTSITVTKN 112
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
L K +SK+V RE+I+RD R
Sbjct: 113 LRVCGDCHRATKFISKVVGREIIMRDANR 141
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 110/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHA 148
+I C +G D+GL FF M L+ + R F + M
Sbjct: 324 AILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPI 383
Query: 149 GSTENVWLTLLSACRVHRNVEL----AEKVADM--------------------------- 177
+W L ACR H+N+E+ AEK+ +
Sbjct: 384 NPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERV 443
Query: 178 -ILM----IEPNNTGAYVIL-------------------INEALKDLLERMEQEGYVPDT 213
LM +E + +Y+ + I+ L+++ +QEGY+P+T
Sbjct: 444 RTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPET 503
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL ++EEE+K++ L H E+LAL FG+IST G+TIR++KNL K SK+
Sbjct: 504 AWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKL 563
Query: 274 VHREMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 564 SRREIILRDIKRF-HHF 579
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 110/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHA 148
+I C +G D+GL FF M L+ + R F + M
Sbjct: 411 AILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPI 470
Query: 149 GSTENVWLTLLSACRVHRNVEL----AEKVADM--------------------------- 177
+W L ACR H+N+E+ AEK+ +
Sbjct: 471 NPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERV 530
Query: 178 -ILM----IEPNNTGAYVIL-------------------INEALKDLLERMEQEGYVPDT 213
LM +E + +Y+ + I+ L+++ +QEGY+P+T
Sbjct: 531 RTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPET 590
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
VL ++EEE+K++ L H E+LAL FG+IST G+TIR++KNL K SK+
Sbjct: 591 AWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKL 650
Query: 274 VHREMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 651 SRREIILRDIKRF-HHF 666
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 57/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EALKDLLERME 205
VW +LL ACRVH+N ELA A+ +L +EP+N G YV++ N K++ R+
Sbjct: 738 VWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARIS 797
Query: 206 QEGYVPD------------------------------------------------TKEVL 217
+ G D T+ VL
Sbjct: 798 ERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVL 857
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV EE+K ++L+ H ERLA+ FG+I+T G +R+ KNL K+VSK+ R+
Sbjct: 858 HDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRD 917
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 918 IVVRDANRF-HHF 929
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
+ E + ++ ++ + GY P+T VLL+++EE+K++ L YH E+LA FG+IST GT IR
Sbjct: 638 VYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIR 697
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SKI R +IVRD RF HF
Sbjct: 698 IVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRF-HHF 734
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------- 192
W+ LL AC+ + +E E+ A+ I+ ++P +Y++L
Sbjct: 734 TWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTML 793
Query: 193 --------------INEALKDL----------------LERM----EQEGYVPDTKEVLL 218
+N+ L LER+ + GYV DT VL
Sbjct: 794 DKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLH 853
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DV +E K+ +L H E+LA+ FG++STP G+ +RVIKNL K++SK+ R++
Sbjct: 854 DVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDI 913
Query: 279 IVRDNRRFCRHF 290
++RD+ R+ HF
Sbjct: 914 LMRDSSRY-HHF 924
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------- 192
W+ LL AC+ + +E E+ A+ I+ ++P +Y++L
Sbjct: 600 TWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTML 659
Query: 193 --------------INEALKDL----------------LERM----EQEGYVPDTKEVLL 218
+N+ L LER+ + GYV DT VL
Sbjct: 660 DKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLH 719
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DV +E K+ +L H E+LA+ FG++STP G+ +RVIKNL K++SK+ R++
Sbjct: 720 DVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDI 779
Query: 279 IVRDNRRFCRHF 290
++RD+ R+ HF
Sbjct: 780 LMRDSSRY-HHF 790
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L++L +M++EGYV TK VL DVEEE+K ++L YH E+LA+ FGI++ P G IRVIKN
Sbjct: 582 LEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKN 641
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + K +SKIV R +I+RD+ RF HF
Sbjct: 642 LRVCEDCHNAMKHISKIVGRLIILRDSHRF-HHF 674
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I+ NS C G+ G D+ Q LM ++ PF W
Sbjct: 443 DYGITANSKHYTCMIDLLGRAGRLDDA-----QNLM-----KNMPFE------PDAATWG 486
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
LL A R+H N EL EK A MI +EP+N+G YV+L N
Sbjct: 487 ALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSN 524
>gi|190612775|gb|ACE80765.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 152
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 59/94 (62%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L E M GYVPDT+ VL DVEEE+K + L H E+LA+ FG+ISTP GT IR
Sbjct: 52 IRAELRRLSELMTAVGYVPDTQYVLHDVEEEEKVSRLSLHSEKLAIAFGLISTPPGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ KNL K ++KIV R +IVRD RF
Sbjct: 112 IFKNLRVCGDCHTATKFIAKIVGRTIIVRDANRF 145
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 56/96 (58%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L ME GY+PDT L D+EEE+K ++YH E++AL FG+IS P G IR
Sbjct: 577 IQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIR 636
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K +S IV RE+IVRDN F R
Sbjct: 637 ITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHR 672
>gi|358357200|gb|AEU08440.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 151
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ LK L M+ GYVPDT+ VL D+EE++++ L +H E+LAL FG+ISTP GT I
Sbjct: 52 IHAELKRLSTMMQVAGYVPDTRFVLHDLEEDEREFSLCHHSEKLALAFGLISTPPGTPIC 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +SKIV R +VRD RF HF
Sbjct: 112 VIKNLRVCGDCHTATKFISKIVGRAFVVRDANRF-HHF 148
>gi|358345888|ref|XP_003637006.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355502941|gb|AES84144.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 679
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 63/228 (27%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNV 168
S+ G G DE L+F +M M + VW TL+++CRVH N
Sbjct: 391 SVVDMIGSIGNLDEALEFIEKMPME----------------PSVEVWETLMNSCRVHGNT 434
Query: 169 ELAEKVADMILMIEPN--NTGAYVILI--------------------------------- 193
EL ++ A+++ ++P+ N + V L+
Sbjct: 435 ELGDRCAELVEKLDPSRLNEKSKVCLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRA 494
Query: 194 -------NEALKDLLER----MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
N + LL R M++ GY+ +T+ L DV++E K++ L H ERLA+ G+
Sbjct: 495 GDTSLPENNMIYALLRRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGL 554
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+++P +TIRVIKNL K++S +V RE I+RD +RF HF
Sbjct: 555 LNSPARSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRF-HHF 601
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 56/96 (58%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L ME GY+PDT L D+EEE+K ++YH E++AL FG+IS P G IR
Sbjct: 476 IQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIR 535
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K +S IV RE+IVRDN F R
Sbjct: 536 ITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHR 571
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 75/259 (28%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI----- 145
++ + + C +G +EG +F M M + R S
Sbjct: 686 VTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIE 745
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELA--------------------------------- 171
M ++W +LL ACR+H N++LA
Sbjct: 746 NMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNE 805
Query: 172 -EKVADMILMIEPNNTGAYVIL---------------------INEALKDLLERMEQEGY 209
EKV M+ N + ++ + L++L M+ GY
Sbjct: 806 VEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 865
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP T VL D+EEE K+ L YH ERLA+ FG+I+T GTT+R+ KNL + K+
Sbjct: 866 VPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKL 925
Query: 270 VSKIVHREMIVRDNRRFCR 288
+SKIV+R ++VRD RF R
Sbjct: 926 ISKIVNRVILVRDMHRFHR 944
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
HF VD L +R+G V+K +E ++ + I R ++ C +G D L F
Sbjct: 362 HFGCMVDLL--ARAGQVKKAYEY--IKSMPMQPNVVIWR-TLLGACTVHG--DSDLAEFA 414
Query: 129 QMLMAKIKARHA-PFSRIMHAGSTENVWLTL-----------LSACRVHRNVELAEKVAD 176
++ + +++ H+ + + + ++E W + + H VE+ +V +
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 177 MIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
++ P + Y LK++ R+ EGYVP V +DVEEE+K+N + YH E
Sbjct: 475 FLMGDKSHPQSDAIYA-----KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 529
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
++A+ F +ISTP+ + I V+KNL K+VSK+ +RE++VRD R
Sbjct: 530 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 56/204 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
F R M VW LL AC +H++ LA +D + ++P N G YV+L N
Sbjct: 513 FIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQN 572
Query: 195 --------------------------------------------EALKDLLE----RMEQ 206
A+ +LE +M +
Sbjct: 573 YPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMRE 632
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
G+ +T L DVEEE+K+ ++ H E+LA+ FG+I++ GT IR+IKNL +
Sbjct: 633 AGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNA 692
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K +SKI R ++VRD RF HF
Sbjct: 693 TKFISKITERVIVVRDANRF-HHF 715
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEP-------------NNTG------------- 187
VW LL C++HRN +LAE ++ +EP +N+G
Sbjct: 314 VWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMK 373
Query: 188 ----------AYVIL-------------------INEALKDLLERMEQEGYVPDTKEVLL 218
++V L I L +L M+ GY P T+ V+
Sbjct: 374 AKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGYEPTTEVVMF 433
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVE E+K+N L +H E++A+ F +I+T G TIRV KNL K++S+I RE+
Sbjct: 434 DVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHSAIKLISRITCREI 493
Query: 279 IVRDNRRF 286
+VRDN RF
Sbjct: 494 VVRDNNRF 501
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 100/243 (41%), Gaps = 66/243 (27%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACR 163
A++ +I C G +EG FF QM + K AP +VW LL AC
Sbjct: 409 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGKMPMAP---------AASVWGALLGACT 459
Query: 164 VHRNVELAEKVA--------------------------------------DMILMIEP-- 183
+H NV LAE+ D+ L EP
Sbjct: 460 IHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGC 519
Query: 184 ---------------NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQ-KKN 227
+N+ I L +++ R+E GYVP+ +L VEEE K+
Sbjct: 520 SSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQ 579
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
L+ H E+LA+ FG+IST IR++KNL K+VSK+ RE+++RD RF
Sbjct: 580 ALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRF- 638
Query: 288 RHF 290
HF
Sbjct: 639 HHF 641
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 56/200 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------- 192
M A T +W+ LLS C ++ +EL E +AD IL ++P++ G ++
Sbjct: 472 MKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKV 531
Query: 193 --INEALKD---------------------LLE-------------------RMEQEGYV 210
+ + +KD L+E M + GY+
Sbjct: 532 RQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYI 591
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P T+ V D+EEE K+ L YH E+LA+ FG+++T GT + +IKNL K +
Sbjct: 592 PRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYI 651
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SKI RE++VRD +RF HF
Sbjct: 652 SKIADREIVVRDAKRF-HHF 670
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 57/201 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
M +W LL ACR+H+++E +++ +I ++ ++ G +V+L N +
Sbjct: 329 MPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEA 388
Query: 198 KDLLERMEQEG-----------------------------------------------YV 210
K + +++E G YV
Sbjct: 389 KAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYV 448
Query: 211 PDTKEVLLDV-EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+ EVLLD+ +EE K+ L H E+LA+ FG+I+TP GT IR++KNL K
Sbjct: 449 PEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKF 508
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD R+ HF
Sbjct: 509 ISKVYKREIIVRDRIRY-HHF 528
>gi|218201925|gb|EEC84352.1| hypothetical protein OsI_30875 [Oryza sativa Indica Group]
Length = 393
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 83 GSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF 142
G + EI+ V D + D A S N++ AG +N E L+ F + + ++
Sbjct: 169 GKCGRADEIVQVFDESSHMDVA-SCNALVAGLSRNAQVSEALRLFREFVGRGVEL----- 222
Query: 143 SRIMHAGSTENV--WLTLLSACRVH-RNVELAEKVADMILM-IEPNN----TGAYVILIN 194
NV W ++++ C + +++E + +M IEPN+ + + I
Sbjct: 223 ----------NVVSWTSIVACCVQNGKDLEAVDLFREMQSEGIEPNSVTIPSHPMMATIT 272
Query: 195 EALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
E LK L M + G+ P T VL DVEE+ K +IL H E+LA+ G+IST GT +RVI
Sbjct: 273 EKLKHLTVEMRRLGFAPSTDYVLHDVEEQDKDDILSVHSEKLAVALGLISTSRGTPLRVI 332
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL K +S RE+ VRD RF HF
Sbjct: 333 KNLRICGDCHEAMKFISSFEGREIYVRDTNRF-HHF 367
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 56/204 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
F R M VW LL AC +H++ LA +D + ++P N G YV+L N
Sbjct: 568 FIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQN 627
Query: 195 --------------------------------------------EALKDLLE----RMEQ 206
A+ +LE +M +
Sbjct: 628 YPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMRE 687
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
G+ +T L DVEEE+K+ ++ H E+LA+ FG+I++ GT IR+IKNL +
Sbjct: 688 AGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNA 747
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K +SKI R ++VRD RF HF
Sbjct: 748 TKFISKITERVIVVRDANRF-HHF 770
>gi|190612915|gb|ACE80835.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L E+ME+ GYVPDT+ VL +V++E+K L +H E+LA+ FG+IST GT +R
Sbjct: 52 IHAQLERLAEQMEEAGYVPDTRFVLHNVKKEEKVFRLCHHSEKLAIAFGLISTAPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K +SKIV RE++VRD RF HF
Sbjct: 112 IFKNLRACVDCHTATKFMSKIVDREIVVRDANRF-HHF 148
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 105/249 (42%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I GC G+ G DE +F R M VW
Sbjct: 503 DYGICPRIEHYGCMVDLLGRAGLIDEAYQFI----------------RNMPIEPNAVVWR 546
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE------------ALKDLLER- 203
LLSAC VH+NVE+ E+ I+ ++P ++G Y++L N K++ E+
Sbjct: 547 ALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKG 606
Query: 204 ---------MEQEG---------------------------------YVPDTKEVLLDVE 221
+E EG Y+P+T + LDV+
Sbjct: 607 VEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVD 666
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E +K+ + +H E+LA+ FG++ + G TIR+ KNL K++SK+ +RE+IVR
Sbjct: 667 EYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVR 726
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 727 DRNRF-HHF 734
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 91/205 (44%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP------------------ 183
F + M VW LL ACRVHRN LA A+ +L +EP
Sbjct: 727 FIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGK 786
Query: 184 ----------------------------NN-----TGAYVILINEA----LKDLLERMEQ 206
NN +G Y +EA L ++ E + +
Sbjct: 787 WNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRR 846
Query: 207 EG-YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
EG YV DT+ VL D EE+K ++L+ H ER+A+ FG+IST G IR+ KNL
Sbjct: 847 EGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHE 906
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+VSK+ R+++VRD RF HF
Sbjct: 907 FTKLVSKLFERDIVVRDANRF-HHF 930
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L++L +M +EGYV TK VL DVEEE+K+++L YH E+LA+ FGI++ P G IRV+KN
Sbjct: 660 LEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKN 719
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L + + K +SKIV R +I+RD+ RF HF
Sbjct: 720 LRVCQDCHNAIKHISKIVGRLIILRDSHRF-HHF 752
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
N T I + LK L +M+ GYVPD V D+EE++K+ IL H ERLA+ FGII
Sbjct: 682 NQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGII 741
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
STP + IR+ KNL + K +S+I RE++VRD+ RF HF
Sbjct: 742 STPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRF-HHF 787
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 55/148 (37%)
Query: 102 DYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE----- 152
D ++ N+I A G +G +E L+ F ML ++KA H F ++ H+G +
Sbjct: 490 DTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKC 549
Query: 153 ----------------------------------------------NVWLTLLSACRVHR 166
++W LLSAC+++
Sbjct: 550 FDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYG 609
Query: 167 NVELAEKVADMILMIEPNNTGAYVILIN 194
N EL +D +L ++ N G YV+L N
Sbjct: 610 NAELGTLASDRLLEVDSENVGYYVLLSN 637
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 119/305 (39%), Gaps = 100/305 (32%)
Query: 62 GGRQVDIHFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFD 121
G VD++ + G+RP R I+ ++ C G D
Sbjct: 499 GAEAVDVYEEMLKKGIRPDR-----------------------ITLLTVLTACSHAGLVD 535
Query: 122 EGLKFFGQM--------------LMAKIKARHAPFS------RIMHAGSTENVWLTLLSA 161
+G K+F M + + R FS + T +W LLS
Sbjct: 536 QGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Query: 162 CRVHRNVELAEKVADMILMIEPNN------------------------------------ 185
CRVH N+EL AD + + P +
Sbjct: 596 CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
Query: 186 --------TGAYVILINEA-----------LKDLLERMEQEGYVPDTKEVLLDVEEE-QK 225
T + L+++ L+DL + M + GYVPDT VL DVE + K
Sbjct: 656 ACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHK 715
Query: 226 KNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
+++L H E++A+ FG++ P GTTIR+ KNL + + + +S +V R++I+RD +R
Sbjct: 716 EDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKR 775
Query: 286 FCRHF 290
F HF
Sbjct: 776 F-HHF 779
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 57/201 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
M +W LL ACR+H+++E +++ +I ++ ++ G +V+L N +
Sbjct: 414 MPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEA 473
Query: 198 KDLLERMEQEG-----------------------------------------------YV 210
K + +++E G YV
Sbjct: 474 KAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYV 533
Query: 211 PDTKEVLLDV-EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+ EVLLD+ +EE K+ L H E+LA+ FG+I+TP GT IR++KNL K
Sbjct: 534 PEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKF 593
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD R+ HF
Sbjct: 594 ISKVYKREIIVRDRIRY-HHF 613
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 108/256 (42%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPF---SRIMHAGSTE 152
I + C G D G +F M+ M + R ++++H E
Sbjct: 555 ILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFE 614
Query: 153 N---VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALK 198
VW LLSAC +H +VEL A +L IEP + +V+L N +++
Sbjct: 615 PSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIR 674
Query: 199 DLLER-----------MEQEGYV----------PDTK----------------------- 214
++R +E +G V PDTK
Sbjct: 675 TSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFS 734
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
VLLDVE+ K+ L+ H ERLAL +G+I TP + +R+IKNL K++SKIV
Sbjct: 735 SVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIV 794
Query: 275 HREMIVRDNRRFCRHF 290
R++I+RD RF HF
Sbjct: 795 QRDIIIRDMNRF-HHF 809
>gi|358357230|gb|AEU08455.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I LK L ++ + GYV DT+ VL DV+E+QKK L +H E+LA+ FG+IST GT +R
Sbjct: 52 IQAELKSLYVQIREAGYVADTQFVLHDVKEQQKKFFLCHHSEKLAIAFGLISTSPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K+++KIV R ++VRD RF HF
Sbjct: 112 VIKNLRVCGDCHTATKLITKIVRRTIVVRDANRF-HHF 148
>gi|3377941|emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 69 HFDGGVDGLRPSRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFG 128
HF VD L +R+G V+K +E ++ + I R ++ C +G D L F
Sbjct: 145 HFGCMVDLL--ARAGQVKKAYEY--IKSMPMQPNVVIWR-TLLGACTVHG--DSDLAEFA 197
Query: 129 QMLMAKIKARHA-PFSRIMHAGSTENVWLTL-----------LSACRVHRNVELAEKVAD 176
++ + +++ H+ + + + ++E W + + H VE+ +V +
Sbjct: 198 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 257
Query: 177 MIL--MIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGE 234
++ P + Y LK++ R+ EGYVP V +DVEEE+K+N + YH E
Sbjct: 258 FLMGDKSHPQSDAIYA-----KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSE 312
Query: 235 RLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRR 285
++A+ F +ISTP+ + I V+KNL K+VSK+ +RE++VRD R
Sbjct: 313 KIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 363
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
N T I + LK L +M+ GYVPD V D+EE++K+ IL H ERLA+ FGII
Sbjct: 682 NQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGII 741
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
STP + IR+ KNL + K +S+I RE++VRD+ RF HF
Sbjct: 742 STPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRF-HHF 787
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 55/148 (37%)
Query: 102 DYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM----HAGSTE----- 152
D ++ N+I A G +G +E L+ F ML ++KA H F ++ H+G +
Sbjct: 490 DTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKC 549
Query: 153 ----------------------------------------------NVWLTLLSACRVHR 166
++W LLSAC+++
Sbjct: 550 FDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYG 609
Query: 167 NVELAEKVADMILMIEPNNTGAYVILIN 194
N EL +D +L ++ N G YV+L N
Sbjct: 610 NAELGTLASDRLLEVDSENVGYYVLLSN 637
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 76/254 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSR----IMHAG- 149
SI C G ++G ++F +M M + R + I+H
Sbjct: 376 SILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPV 435
Query: 150 -STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
T +W TLL AC +H NV+LAE+V + + ++PNN+G +V+L N
Sbjct: 436 LPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAV 495
Query: 195 --------------------------------------EALKDLLE---RMEQEG-YVPD 212
EA + L E ++ EG Y+P+
Sbjct: 496 RRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPE 555
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL D+E+E+K++ + H E+LA+ FGI G+ IR++KNL R K++SK
Sbjct: 556 VGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISK 615
Query: 273 IVHREMIVRDNRRF 286
+ E++VRD RF
Sbjct: 616 VYGLEIVVRDRSRF 629
>gi|190612889|gb|ACE80822.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+EAL+ L E+M++ GYVPDT V +VEE K L +H E+LA+ FG+IST GT +R
Sbjct: 52 IHEALQGLCEQMKEAGYVPDTHGVQHNVEEADKVFHLCHHSEKLAIAFGLISTAPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL + K ++KIV RE++VRD+ RF HF
Sbjct: 112 IFKNLRACVDCHTAIKFIAKIVGREIVVRDSNRF-HHF 148
>gi|190612823|gb|ACE80789.1| pentatricopeptide repeat protein [Asplenium nidus]
Length = 152
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 61/96 (63%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L M+ EGYVP+T VL DVEEE K+ +L YH E+LA+ FG+ISTP GT +
Sbjct: 52 IYSELEKLNLEMKAEGYVPETNLVLHDVEEEMKERLLCYHSEKLAMAFGLISTPQGTPLH 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
V+KNL K +SKI RE+++RD RF R
Sbjct: 112 VVKNLRICADCHTAAKYISKIRAREIVMRDYNRFHR 147
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 56/200 (28%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------- 192
MH T +W+ LLS C ++ +EL E +A IL +P + G ++
Sbjct: 475 MHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKV 534
Query: 193 --INEALKD----------LLE------------------------------RMEQEGYV 210
I + +KD L+E M + GYV
Sbjct: 535 REIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYV 594
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P T+ V D++E+ K+ +L YH ERLA+ FG+++T GT + +IKNL K +
Sbjct: 595 PRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYI 654
Query: 271 SKIVHREMIVRDNRRFCRHF 290
SKIV RE++VRD +RF HF
Sbjct: 655 SKIVDREIVVRDAKRF-HHF 673
>gi|190612665|gb|ACE80710.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
++ L+ L E+M++ GYVPDT+ VL DV+EE K L +H E+LA+ FG+IST GT +R
Sbjct: 52 VHAELQRLSEKMKEAGYVPDTRFVLHDVDEEDKVFRLCHHSEKLAIAFGLISTVPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKIV RE+IVRD RF HF
Sbjct: 112 IYKNLRVCVDCHSATKFMSKIVGREIIVRDANRF-HHF 148
>gi|302776458|ref|XP_002971391.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
gi|300160523|gb|EFJ27140.1| hypothetical protein SELMODRAFT_95540 [Selaginella moellendorffii]
Length = 598
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L +++EGY PDT+ L DVEEE+K +L +H E+LA++FG++STPDG+ +
Sbjct: 491 IYAGLDRLFVELQREGYRPDTRVALYDVEEEKKVRMLLHHSEKLAIMFGLMSTPDGSPLF 550
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K+++KI R++++RD RF HF
Sbjct: 551 VLKNLRVCADCHAATKIIAKITKRKIVMRDASRF-HHF 587
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 56/204 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
F R+M + LLSAC++H N+ELAE+VA ++ + ++G Y++L N
Sbjct: 408 FIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGK 467
Query: 195 --------------------------------------------EALKDLLERMEQ---- 206
E + LE + Q
Sbjct: 468 WKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRL 527
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
EGY P T+ VL D+E+ +K+ L H ERLA+ +G+IST TT+RV+KNL
Sbjct: 528 EGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLT 587
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K++S I R+++VRD RF HF
Sbjct: 588 IKLISNITRRKIVVRDRNRF-HHF 610
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + LK ++ R++Q+GY P+T VL D+ E+QK+ +L H ERLAL FG+I+TP GT ++
Sbjct: 767 IYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQ 826
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+VS I RE+I+RD RF HF
Sbjct: 827 IVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRF-HHF 863
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML----- 131
SG + + + A+ F + I + +T GC NG EG ++F M+
Sbjct: 576 SGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKI 635
Query: 132 ---------MAKIKARHAPFSRIMH--------AGSTENVWLTLLSACRVHRNVELAEKV 174
M + +R M AG+ VW TLL ACRVH+NVEL +
Sbjct: 636 NPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAM--VWRTLLGACRVHKNVELGKFS 693
Query: 175 ADMILMIEPNNTGAYVILIN 194
AD +L +EP+++ YV+L N
Sbjct: 694 ADKLLSLEPHDSSTYVLLSN 713
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I LK + R++QEGY P+T VL D+ EEQK+ +L H ERLAL FG+I+TP T ++
Sbjct: 767 IYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQ 826
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+VS I RE+I+RD RF HF
Sbjct: 827 IVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRF-HHF 863
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 24/108 (22%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM--------------AKIKARHAPFSRIMH------- 147
++ GC G EG ++F M+M + +R M+
Sbjct: 608 AVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPF 667
Query: 148 -AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
AG+ VW TLL ACRVH+NVEL + A +L++EP+++ YV+L N
Sbjct: 668 PAGAM--VWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSN 713
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + LK ++ R++Q+GY P+T VL D+ E+QK+ +L H ERLAL FG+I+TP GT ++
Sbjct: 767 IYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQ 826
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+VS I RE+I+RD RF HF
Sbjct: 827 IVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRF-HHF 863
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML----- 131
SG + + + A+ F + I + +T GC NG EG ++F M+
Sbjct: 576 SGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKI 635
Query: 132 ---------MAKIKARHAPFSRIMH--------AGSTENVWLTLLSACRVHRNVELAEKV 174
M + +R M AG+ VW TLL ACRVH+NVEL +
Sbjct: 636 NPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAM--VWRTLLGACRVHKNVELGKFS 693
Query: 175 ADMILMIEPNNTGAYVILIN 194
AD +L +EP+++ YV+L N
Sbjct: 694 ADKLLSLEPHDSSTYVLLSN 713
>gi|358357198|gb|AEU08439.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L M++ GYVPDT+ VL DVEEE K+ L +H E+LA+ FG+IST GT +R
Sbjct: 52 IHAELERLSGWMKEAGYVPDTRFVLHDVEEEMKEFSLCHHSEKLAIAFGLISTHPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKIV RE++VRD RF HF
Sbjct: 112 ITKNLRVCGDCHTATKFISKIVQREIVVRDANRF-HHF 148
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 57/193 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLE 202
+W +LL AC++H N+EL E A ++ IEP N+G+YV+L N ++ LL
Sbjct: 498 IWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLN 557
Query: 203 RMEQEGYVPDTKEVLLD------------------------------------------- 219
+ VP + +D
Sbjct: 558 DKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVL 617
Query: 220 --VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
+EEE ++ L +H E+LA+ FG+IST GT + ++KNL + K++SKI RE
Sbjct: 618 QEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKRE 677
Query: 278 MIVRDNRRFCRHF 290
+I RD RF HF
Sbjct: 678 IIARDRTRF-XHF 689
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 102/257 (39%), Gaps = 77/257 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAG 149
+ C G EG +F QM M + R R M
Sbjct: 382 VLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVT 441
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
VW LL ACR+H E+A+ VA+ + +EP + G YV+L N
Sbjct: 442 PHGGVWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVR 501
Query: 195 --------------------------------------EALKDLLE---RMEQEGYVPDT 213
E K LLE +++ EGYVP
Sbjct: 502 ILMRKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKLKLEGYVPIL 561
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
++ DV +E+K+ +L H E+LAL FG+++ G TIR+IKNL ++VS++
Sbjct: 562 SSIVYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCHLFMQLVSRV 621
Query: 274 VHREMIVRDNRRFCRHF 290
E+IVRDN RF HF
Sbjct: 622 ESVEIIVRDNMRF-HHF 637
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHA-- 148
I+ S+ C G DE ++F M M + R M
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 149 ----GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------LINE 195
+ ++W LL A RVH++ EL + A+ + ++EP +G +V+ + NE
Sbjct: 667 SMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726
Query: 196 ALK----------------------------------------------DLLERMEQEGY 209
K +L + M + G+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP+ L D++ +K+ +L +H ERLA+ F ++STP G IRV KNL R K
Sbjct: 787 VPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKF 846
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE+I+RD RF HF
Sbjct: 847 ISKIVSREIIIRDINRF-HHF 866
>gi|356510940|ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 63/228 (27%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNV 168
S+ G G DE +F +M M + W TL++ CRVH N
Sbjct: 443 SVVDMIGSIGHLDEAFEFIERMPME----------------PSAETWETLMNLCRVHGNT 486
Query: 169 ELAEKVADMILMIEPN--NTGAYVILI--------------NEALKDLLE---------- 202
L ++ A+++ ++ + N + L+ N A K+LLE
Sbjct: 487 GLGDRCAELVEQLDSSRLNEQSKAGLVPVKASDLTKEKEKKNLASKNLLEVRSRVREYRA 546
Query: 203 --------------------RMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
+M++ GYVP+TK VL D+++E K+ L H ERLA+ +G+
Sbjct: 547 GDTSHPENDKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAVAYGL 606
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+++P +RVIKNL K++SK+V RE+I+RD +RF HF
Sbjct: 607 LNSPARAPMRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRF-HHF 653
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 199 DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLP 258
++ E +++ G+VPD VL DV++E K+ +L H E+LA+ FG+ISTP+ TT+R++KNL
Sbjct: 702 EMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLR 761
Query: 259 SLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+V RE+IVRD RF HF
Sbjct: 762 VCNDCHTAIKFISKVVDREIIVRDATRF-HHF 792
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 20/105 (19%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHA------PFSRIMHAG 149
+ + C G D+G +++ QML M + AR F + M
Sbjct: 538 VFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVA 597
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW +LL+ACRV +N +LAE A+ +L I+P+N+GAY L N
Sbjct: 598 PDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALAN 642
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I +++L+ +M+ GY P T V+ ++EE+K++ L H E+LA+ FG+IST +GTTIR
Sbjct: 461 IYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIR 520
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL K++S IV RE+IVRD RF HF
Sbjct: 521 VVKNLRICNDCHDAAKIISGIVKREIIVRDRSRF-HHF 557
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHA-- 148
I+ S+ C G DE ++F M M + R M
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 149 ----GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI---------LINE 195
+ ++W LL A RVH++ EL + A+ + ++EP +G +V+ + NE
Sbjct: 667 SMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNE 726
Query: 196 ALK----------------------------------------------DLLERMEQEGY 209
K +L + M + G+
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGF 786
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP+ L D++ +K+ +L +H ERLA+ F ++STP G IRV KNL R K
Sbjct: 787 VPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKF 846
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE+I+RD RF HF
Sbjct: 847 ISKIVSREIIIRDINRF-HHF 866
>gi|297745258|emb|CBI40338.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 24/209 (11%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIM 146
KVFE M V+D +S N++ G Q G FD+ L F ++ KI+ + +
Sbjct: 287 KVFERMKVKD-------VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNPNVVTLV- 338
Query: 147 HAGSTENVWLTLLSACRVHRNV----ELAEKVADMILMIEPNNTGAYVILINEALK-DLL 201
+LLS C + + E IL ++ N+ G +++IN + DL+
Sbjct: 339 ----------SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDIDLM 388
Query: 202 ERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLR 261
+R++ GYVPD + L DV++E+K ++L H E+LAL +GI++T G IR+ KNL +
Sbjct: 389 QRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACG 448
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+S I+ E+IVRD+ RF HF
Sbjct: 449 DCHSAFTYISIIIEHEIIVRDSSRF-HHF 476
>gi|218197718|gb|EEC80145.1| hypothetical protein OsI_21946 [Oryza sativa Indica Group]
Length = 603
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 62/248 (25%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S RK F+ M + + N++ +G QNG + + F QML K+ R P +
Sbjct: 366 SARKAFDAMPEKTMESW-------NAMISGYAQNGLTEMAVALFEQML--KLNVRPNPIT 416
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILM--IEPNNTGAYVILINEA----- 196
ST LSAC + L + + +I +EPN ++ EA
Sbjct: 417 ----ISST-------LSACAQLGALSLGKWLHRIIAEEDLEPNQYSEAAVVRQEAKSRKL 465
Query: 197 ----------------------------------LKDLLERMEQEGYVPDTKEVLLDVEE 222
L+ L +M + GY P+T+ L DVEE
Sbjct: 466 VKTPGYTLIEISNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEE 525
Query: 223 EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRD 282
E+K++++ H E+LA+ FG++ST GT IR+IKNL + K +SK+ R ++VRD
Sbjct: 526 EEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRD 585
Query: 283 NRRFCRHF 290
RF HF
Sbjct: 586 ASRF-HHF 592
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 106/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------------LMAKIKARHAPFSRIMHAG 149
+ + C G D+G+ +F M A + +R F + M
Sbjct: 759 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 818
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------EALKDLL- 201
VW TLLSAC VH+N+E+ E A +L +EP ++ YV+L N +DL
Sbjct: 819 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 878
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
++M+++G YV D
Sbjct: 879 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 938
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+L +++ EQK I++ H E+LA+ FG++S P I V+KNL K VSK+
Sbjct: 939 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 998
Query: 275 HREMIVRDNRRFCRHF 290
+RE+IVRD RF HF
Sbjct: 999 NREIIVRDAYRF-HHF 1013
>gi|358357140|gb|AEU08410.1| pentatricopeptide repeat protein [Frullania tamarisci]
Length = 152
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L +M++ GYVPDTK VL DVEEE+K + L+ H E+LA+ FG+I+TP GT IR
Sbjct: 52 IHAELESLSVQMKEMGYVPDTKFVLHDVEEEKKVSRLWGHSEKLAIAFGLINTPPGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K++ KI R +IVRD RF HF
Sbjct: 112 IFKNLRVCGDCHTATKLIGKISGRTIIVRDANRF-HHF 148
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQ---MLMAKIKARHA-----------------PFSRIMHAG 149
+ C G EG K F + + ++K+ H F R+M
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI------------------ 191
+W ++L ACRV+ N+EL E+ A +L +EP N G Y++
Sbjct: 449 PDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVR 508
Query: 192 -LINEA------------------------------------LKDLLERMEQEGYVPDTK 214
L+NE L+ + E+++ GYV DT
Sbjct: 509 ELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTS 568
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLL++++ +K+ + H E+LAL +G++ + G I ++KNL K+VSKI
Sbjct: 569 EVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIY 628
Query: 275 HREMIVRDNRRFCRHF 290
R++ +RD RF HF
Sbjct: 629 QRQITLRDRNRF-HHF 643
>gi|358357240|gb|AEU08460.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L L M++ GYVPDT VL DVEEEQK+ L +H E+LA+ FG+ISTP G I
Sbjct: 52 IHAELNRLSGWMKEAGYVPDTSYVLHDVEEEQKELSLCWHSEKLAIAFGLISTPPGAPIC 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K +SKIV R ++VRD RF HF
Sbjct: 112 IIKNLRVCGDCHTATKFISKIVGRIVVVRDANRF-HHF 148
>gi|190612779|gb|ACE80767.1| pentatricopeptide repeat protein [Ptilidium pulcherrimum]
Length = 152
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+N ++ I++ L + M + GYVPDT+ VL DV+EE K+ L H E+LA+ FG+I
Sbjct: 43 DNQHPQIMEIHQELDRVYGMMREAGYVPDTRFVLHDVDEEGKEKHLCRHSEKLAIAFGLI 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
STP GT +R+ KNL K ++KIV R++IVRD RF HF
Sbjct: 103 STPPGTPLRIFKNLRVCGDCHTATKFIAKIVGRDIIVRDANRF-HHF 148
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 121/315 (38%), Gaps = 118/315 (37%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
RKVF++M +D + + NS+ G G +G DE L+ F +M +K F +
Sbjct: 311 RKVFDVMEGKDVVAW-------NSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAV 363
Query: 146 M----HAGSTEN------------------------------------------------ 153
+ HAG
Sbjct: 364 LTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEP 423
Query: 154 ---VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------- 194
+W TLL ACR+H NV L E++A++++ ++G YV+L N
Sbjct: 424 DPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRS 483
Query: 195 -----------------------------------EALKDLLERM----EQEGYVPDTKE 215
+ + +LE+M ++ Y P T
Sbjct: 484 MMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDA 543
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL D+ E++K+ L H E+LAL FG+IST G I+++KNL K++SKI
Sbjct: 544 VLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISG 603
Query: 276 REMIVRDNRRFCRHF 290
R++I+RD RF HF
Sbjct: 604 RKIIMRDRNRF-HHF 617
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 106/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------------LMAKIKARHAPFSRIMHAG 149
+ + C G D+G+ +F M A + +R F + M
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------EALKDLL- 201
VW TLLSAC VH+N+E+ E A +L +EP ++ YV+L N +DL
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
++M+++G YV D
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 978
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+L +++ EQK I++ H E+LA+ FG++S P I V+KNL K VSK+
Sbjct: 979 SLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVS 1038
Query: 275 HREMIVRDNRRFCRHF 290
+RE+IVRD RF HF
Sbjct: 1039 NREIIVRDAYRF-HHF 1053
>gi|190612907|gb|ACE80831.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I+ L+ L +ME+ GYVPDT+ VL DVEEE+K L +H E+LA+ FG++ST GT
Sbjct: 49 ILAIHAELERLAGQMEEAGYVPDTRLVLHDVEEEEKAYRLCHHSEKLAIAFGLLSTAPGT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+RV KN K++SKIV RE++VRD R HF
Sbjct: 109 PLRVYKNWRVCADCHSTTKLMSKIVGREIVVRDANRL-HHF 148
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 124/325 (38%), Gaps = 122/325 (37%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++ GS+ R++F++M ++ ++ N++ G G +G E LK F +ML + I
Sbjct: 461 AKCGSIVEARQLFDLMVDKN-------VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP 513
Query: 137 ARHAPFSRIMH----------------------------------------AGSTEN--- 153
F I++ AG N
Sbjct: 514 PTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALE 573
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL AC +H+N E+A + + ++P N G YV+L N
Sbjct: 574 FIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRN 633
Query: 195 --------------------------------------------EALKDLLE----RMEQ 206
A+ ++LE +M +
Sbjct: 634 FPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMRE 693
Query: 207 EGYVPDTKEVLL-DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
GY +T L DVE+E+K+ ++ H E+LA+ FG+IST GT IR+IKNL
Sbjct: 694 AGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHT 753
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKI R ++VRD RF HF
Sbjct: 754 ATKFISKITERVIVVRDANRF-HHF 777
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 199 DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLP 258
D++ ++ EGYVPDT++VL + EE+K+ L YH E+LA+ FG++ T G T+R+ KNL
Sbjct: 504 DMMRKIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNLR 563
Query: 259 SLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R K VS++ R+++VRD RF HF
Sbjct: 564 VCRDCHEATKFVSRVFERQIVVRDRNRF-HHF 594
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 124/325 (38%), Gaps = 122/325 (37%)
Query: 80 SRSGSV---RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIK 136
++ GS+ R++F++M ++ ++ N++ G G +G E LK F +ML + I
Sbjct: 461 AKCGSIVEARQLFDLMVDKN-------VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP 513
Query: 137 ARHAPFSRIMH----------------------------------------AGSTEN--- 153
F I++ AG N
Sbjct: 514 PTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALE 573
Query: 154 ------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
VW LL AC +H+N E+A + + ++P N G YV+L N
Sbjct: 574 FIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRN 633
Query: 195 --------------------------------------------EALKDLLE----RMEQ 206
A+ ++LE +M +
Sbjct: 634 FPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMRE 693
Query: 207 EGYVPDTKEVLL-DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
GY +T L DVE+E+K+ ++ H E+LA+ FG+IST GT IR+IKNL
Sbjct: 694 AGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHT 753
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SKI R ++VRD RF HF
Sbjct: 754 ATKFISKITERVIVVRDANRF-HHF 777
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 118/317 (37%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S R+VFE + RD IS ++ G Q+G +E + +M++A +K F
Sbjct: 291 SAREVFEEITGRDI-------ISWTTMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFV 343
Query: 144 RIM----HAG-------------------------------------------------- 149
++ HAG
Sbjct: 344 GLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEAEELITTMPY 403
Query: 150 -STENVWLTLLSACRVHRNVELAEKVA--------------------------------- 175
E W +LLSAC+ + N E++ +VA
Sbjct: 404 VPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVNGKWDSVDTV 463
Query: 176 -----DMILMIEPN-------------NTGAYVILINEA----LKDLLERMEQEGYVPDT 213
DM + EP + G I + E L++L+ M Q GYVPDT
Sbjct: 464 RKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEILGFLEELVSEMRQRGYVPDT 523
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
V+ D+EE +K++ L H ERLA+ FGI+ +P G+ IRV+KNL K +S+I
Sbjct: 524 SSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPLGSVIRVVKNLRVCNDCHTVMKFISEI 583
Query: 274 VHREMIVRDNRRFCRHF 290
R++IVRD RF HF
Sbjct: 584 FQRKIIVRDASRF-HHF 599
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 62/215 (28%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV----------- 190
F + M E VW LL ACRVH + ++ AD + + P +G YV
Sbjct: 468 FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 527
Query: 191 ---------ILINEALKD-----------------------------------LLERMEQ 206
I+ ++ LK L+++M++
Sbjct: 528 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD-----GTTIRVIKNLPSLR 261
GYVPD++ L DVEEE K+ L H E+LA+VF +++T + TIR+ KNL
Sbjct: 588 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICG 647
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
K++S+I RE+I+RD RF H F C
Sbjct: 648 DCHVAAKLISQITSREIIIRDTNRF--HVFRFGVC 680
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 104/261 (39%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML-----MAKIKARHAPFSRIMHAGSTE------- 152
I+ + A C G +EG F M+ ++ + H G E
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363
Query: 153 --------NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
VW LL +C++H NVE+ E + ++ +EP++ G YVIL N
Sbjct: 364 EMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDG 423
Query: 195 -----------------------------------------EALKDLLER----MEQEGY 209
EA+ L+R M++ GY
Sbjct: 424 VARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGY 483
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P V DVE+++K +++ H ERLA+ FG+IST GT + +IKNL K
Sbjct: 484 APQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKF 543
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKI RE+ +RD R+ HF
Sbjct: 544 ISKITEREITIRDVNRY-HHF 563
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIM----HAGSTEN---------- 153
S+ C +G EG + FG+ML K++ + ++ AG E
Sbjct: 341 SLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 400
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
VW + LS CRVH+N+EL + A +L + +N G Y+++ N
Sbjct: 401 EQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARS 460
Query: 195 -------------------------------------EALKDLLERMEQ----EGYVPDT 213
+ + +L +ME EGY PD
Sbjct: 461 RTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDL 520
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
++LL+V+EE+KK L H +++A+ F ++ TP G+ I++ +NL K +S I
Sbjct: 521 TQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMI 580
Query: 274 VHREMIVRDNRRF 286
RE++VRD RF
Sbjct: 581 YEREIVVRDRNRF 593
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E +++LL + GYVPD V DVE+EQK+ + YH E+LA+ +G++ TP G IR
Sbjct: 596 IYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIR 655
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
VIKNL K++SK+ +R +IVRD RF
Sbjct: 656 VIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRF 689
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 77/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVWL--- 156
I+ S+ + C +G +EGL F M L + A + AG ++ W
Sbjct: 549 ITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQ 608
Query: 157 ------------TLLSACRVHRNVELAEKVADMILMIEPNNTG----------------- 187
+L AC++H+NVEL EK A + ++P+ G
Sbjct: 609 EMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDK 668
Query: 188 -------------------AYVILINEA-------------------LKDLLERMEQEGY 209
++V L NE L+ L + ++ GY
Sbjct: 669 VAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGY 728
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPD + DVEE+ KK +L H ERLA+ FG+++T GTT+ + KNL K
Sbjct: 729 VPDPDSIH-DVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKY 787
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S + RE+IVRD RRF HF
Sbjct: 788 ISLVTGREIIVRDLRRF-HHF 807
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 107/261 (40%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQML----MAKIKARHAPFSRIM-HAGSTEN------ 153
I+ S+ + C G D+ K+F M + + + +A I+ AG E+
Sbjct: 612 ITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVN 671
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPN---------NTGAYVILINE 195
VW LL A RVHR+ EL A+ + +EP NT A + +E
Sbjct: 672 NMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDE 731
Query: 196 ----------------------------------------------ALKDLLERMEQEGY 209
L +L + M + GY
Sbjct: 732 MAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGY 791
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP+ + L DV+ +K+ +L +H ERLA+ F +ISTP G IRV KNL R K
Sbjct: 792 VPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKY 851
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SKIV RE+I+RD RF HF
Sbjct: 852 ISKIVSREIIIRDINRF-HHF 871
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L +L E+M ++GY PD+ L +V+EE K L YH ER+A+ F +ISTP+G+ I
Sbjct: 767 IMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPIL 826
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V+KNL + KV+SKIV RE+ VRD+ RF HF
Sbjct: 827 VMKNLRACTDCHAAIKVISKIVRREITVRDSSRF-HHF 863
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 110/260 (42%), Gaps = 82/260 (31%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMH------- 147
S+ GC G +EG ++F M+ M + +R M
Sbjct: 564 SVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPF 623
Query: 148 -AGSTENVWLTLLSACRVHRNVEL----AEKV--------ADMILM-------------- 180
AG T +W LL ACRVH+NVEL AEK+ A +L+
Sbjct: 624 PAGPT--IWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKD 681
Query: 181 -------------------IEPNNTGAYVIL----------INEALKDLLERMEQEGYVP 211
I+ N + I I L+ + +++QEGY P
Sbjct: 682 EVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCP 741
Query: 212 DTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG-NKVV 270
DT V DV E+QK+ +L H ERLAL FG+I+TP + + KNL + G H K+V
Sbjct: 742 DTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNL-RVSGDGHTVMKMV 800
Query: 271 SKIVHREMIVRDNRRFCRHF 290
S+I RE+++RD RF HF
Sbjct: 801 SEIEDREIVMRDCCRF-HHF 819
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L ++ ++++ EGY PDT+EV LD++EE+K+ L+ H E+LA+ FG+I+ T IR
Sbjct: 686 IEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIR 745
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SK +RE++VRD RF HF
Sbjct: 746 IVKNLRICNDCHTAAKLISKAFNREIVVRDRHRF-HHF 782
>gi|357487235|ref|XP_003613905.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515240|gb|AES96863.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 768
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 73/227 (32%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G G DE L+F +M M + VW TL+++CRVH N EL ++
Sbjct: 486 GSIGHLDEALEFIEKMPME----------------PSVEVWETLMNSCRVHGNTELGDRC 529
Query: 175 ADMI----------------LMIE-----------------------------------P 183
A+++ L+IE P
Sbjct: 530 AELVEKLDPSRLNEKSKVGLLLIETSDITKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLP 589
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
N YV+L + L +M++ GY+ +T+ L DV++E K++ L H ERLA+ G++
Sbjct: 590 ENNMIYVLL-----RRLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLL 644
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++P +TIRVIKNL K++S +V RE I+RD +RF HF
Sbjct: 645 NSPARSTIRVIKNLRVCGDCHTALKIISDLVGREFIIRDAKRF-HHF 690
>gi|190612855|gb|ACE80805.1| pentatricopeptide repeat protein [Picea abies]
Length = 152
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+++ +M++ GYVP+T VL DVEEE K++IL H E+L + FGII+T GT IR
Sbjct: 52 IYATLENVYGQMKKAGYVPNTNLVLHDVEEEMKEDILCSHSEKLTISFGIINTSPGTPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + K + KIV RE+IVRD RF HF
Sbjct: 112 IMKNLRVCSDCHNATKFICKIVGREIIVRDANRF-HHF 148
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL------------INEALKDLL 201
+W LL+ACR+H NVE+ E+ A+ L +EP N G YV L + + K +
Sbjct: 603 MWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMK 662
Query: 202 ER----------MEQEGYV----------PDTKE-----------------------VLL 218
ER +E G V P T+E V+
Sbjct: 663 ERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMH 722
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+++E K+ + +H E+LA+ +G+ISTP GT IR+ KNL K +SKI RE+
Sbjct: 723 DLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREI 782
Query: 279 IVRDNRRFCRHF 290
I RD RF HF
Sbjct: 783 IARDAHRF-HHF 793
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 105/261 (40%), Gaps = 78/261 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM---LMAKIKARHAP-----FSRIMHAGSTENV- 154
+I+ S+ + C G +EG +F M + +A H R EN+
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 155 -----------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
W +LL ACR H N+ELA K A+ +L +EP+N YV+L N
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWE 564
Query: 195 ---------------------------------------EALKDLLERMEQ-------EG 208
+K++ E +E+ G
Sbjct: 565 EVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAG 624
Query: 209 YVPDTKEVLL--DVEEEQKKNI-LYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YVPD + L+ D +K I L +H E+LA+ FG+IST DG + V+KNL +
Sbjct: 625 YVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHN 684
Query: 266 GNKVVSKIVHREMIVRDNRRF 286
K +S I RE+ VRD RF
Sbjct: 685 AIKFISAIAGREITVRDAHRF 705
>gi|358357154|gb|AEU08417.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L ER++ EGY+PDT+ VL +++EE K+ +L H ERLA+ +G+I PDG IR
Sbjct: 52 IYAELNRLTERIKDEGYIPDTRVVLENIDEEDKERVLCSHSERLAIAYGLICIPDGKPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+ RE++ RD RF HF
Sbjct: 112 VYKNLRVCSDCHTATKFISKVTGREIVARDGNRF-HHF 148
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 105/261 (40%), Gaps = 78/261 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM---LMAKIKARHAP-----FSRIMHAGSTENV- 154
+I+ S+ + C G +EG +F M + +A H R EN+
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 155 -----------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
W +LL ACR H N+ELA K A+ +L +EP+N YV+L N
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWE 564
Query: 195 ---------------------------------------EALKDLLERMEQ-------EG 208
+K++ E +E+ G
Sbjct: 565 EVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAG 624
Query: 209 YVPDTKEVLL--DVEEEQKKNI-LYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
YVPD + L+ D +K I L +H E+LA+ FG+IST DG + V+KNL +
Sbjct: 625 YVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHN 684
Query: 266 GNKVVSKIVHREMIVRDNRRF 286
K +S I RE+ VRD RF
Sbjct: 685 AIKFISAIAGREITVRDAHRF 705
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
+I+ L+ L + E+ GYVPD VL DVE+++KK L+ H ERLAL FG+I TP I
Sbjct: 608 MISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHI 667
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R++KNL K++SKIV R++I+RD RF HF
Sbjct: 668 RILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRF-HHF 705
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 198 KDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
+D++ + EGYVPDT++VL + EE+K+ L YH E+LA+ FG++ T G T+R+ KNL
Sbjct: 503 RDMMREIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMRITKNL 562
Query: 258 PSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R K VS++ R+++VRD RF HF
Sbjct: 563 RVCRDCHEATKFVSRVFERQIVVRDRNRF-HHF 594
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ T ++ + L ++ +R++ EGY PDT EV LD++EE+K+ L+ H E+LA+ FG++
Sbjct: 692 DKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLL 751
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
+ T IR++KNL K++SK RE++VRD RF H+ AC
Sbjct: 752 TISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRF--HYFKEGAC 802
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L +++ GYVPD + VL DVE+++K++IL H ERLA+ F +I+TP TTIR+ KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SKI RE+IVRD+ RF HF
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRF-HHF 812
>gi|218186279|gb|EEC68706.1| hypothetical protein OsI_37186 [Oryza sativa Indica Group]
Length = 416
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 43/267 (16%)
Query: 20 LAGCNEFMDKANGITDRFEERAVSIGHYADLDGISDQLPSSSGGRQVDIHFDGGVDGLRP 79
L C D A G T + A+ +GI+ + ++ VD++ G
Sbjct: 179 LTACARVADLATGET---------VWRAAEQEGIAQSVFVATAA--VDLYVKCG------ 221
Query: 80 SRSGSVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARH 139
R+VF+ M +D A++ ++ G NG E L F M ++
Sbjct: 222 -EMAKAREVFDKMRDKD-------AVAWGAMVGGYASNGHPREALDLFLAMQAEGVR--- 270
Query: 140 APFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKD 199
P + AG+ LSAC ++L + M+ E + Y + L +
Sbjct: 271 -PDCYAV-AGA--------LSACTRLGALDLGRQAIRMVDWDEFLDNPIY-----KKLDE 315
Query: 200 LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPS 259
L M+ GY P T+ V+ DVE+E+K++ L +H E+LA+ F ++ T G TIRV KNL
Sbjct: 316 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRV 375
Query: 260 LRGLRHGNKVVSKIVHREMIVRDNRRF 286
K++S+I HRE+IVRDN RF
Sbjct: 376 CSDCHTAIKLISRITHREIIVRDNNRF 402
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 56/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLE 202
+W +LL AC++H N+EL E A ++ IEP N G+YV+L N ++ LL
Sbjct: 484 IWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLN 543
Query: 203 RMEQEGYVPDTKEVLLD------------------------------------------- 219
+ VP + +D
Sbjct: 544 DKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVL 603
Query: 220 --VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
+EEE K+ L +H E+LA+ FG+IST GT + ++KNL R K++SKI RE
Sbjct: 604 QEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKRE 663
Query: 278 MIVRDNRR 285
+I RD R
Sbjct: 664 IIARDRTR 671
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ T ++ + L ++ +R++ EGY PDT EV LD++EE+K+ L+ H E+LA+ FG++
Sbjct: 524 DKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLL 583
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
+ T IR++KNL K++SK RE++VRD RF H+ AC
Sbjct: 584 TISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRF--HYFKEGAC 634
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 77/278 (27%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI- 145
++FE M + +E D I+ S+ C G DEGL +F M ++ + + ++ +
Sbjct: 383 ELFEEMMLWVEIEPND--ITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVV 440
Query: 146 ------------------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
M +W LL A ++H+N E+ A +L ++P G
Sbjct: 441 DLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPG 500
Query: 188 AYVILIN---------------EALKD--------------------------------- 199
A+ +L N + +KD
Sbjct: 501 AHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNK 560
Query: 200 -------LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
L +++++ GYVPDT V + V++++K+ L YH E+LAL F +++T G+ IR
Sbjct: 561 VYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIR 620
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KN+ K VS +V RE+IVRD RF HF
Sbjct: 621 IMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRF-HHF 657
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 77/249 (30%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
D+ I N GC G+ G E + +M M A W
Sbjct: 638 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVA----------------TWG 681
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------------- 194
LL AC+ H + E+ +V ++ ++P++ G +V+L N
Sbjct: 682 ALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHR 741
Query: 195 -----------------------------EALKDLLERMEQ----EGYVPDTKEVLLDVE 221
+A++D+L M EGY PD EVLLDV+
Sbjct: 742 VLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVD 801
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
EE+K++ L+ H E+LA+ FG+I+ T IR++KNL K++SK R+++VR
Sbjct: 802 EEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVR 861
Query: 282 DNRRFCRHF 290
D RF HF
Sbjct: 862 DRHRF-HHF 869
>gi|413938369|gb|AFW72920.1| hypothetical protein ZEAMMB73_491813 [Zea mays]
Length = 625
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 75/251 (29%)
Query: 113 GCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSR------IMHAGSTE 152
C + G ++GL+ F +M M + AR M G T+
Sbjct: 363 ACSRAGLLEDGLRCFDRMRLEHKVAPNALHYGCMVDLMARAGRLDDARALIGTMPTGPTD 422
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----------------EA 196
W +LL+ACR+H +++LA + + N G YVI+ + EA
Sbjct: 423 TAWRSLLNACRIHGDLDLAWHALQELRRLGAANAGDYVIVADMHARAKNWTAAAALRTEA 482
Query: 197 L--------------------------------KDLLERMEQ-------EGYVPDTKEVL 217
+ +D+ E + Q +GY PDT EV
Sbjct: 483 VDSGLAQSLGFSAVEVRGELHRFVSQDMAHPRTRDIYEMLHQMEWQLRFDGYKPDTSEVA 542
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
LD EE+K ++ H ++LA+ FG++STP+G +RV+ NL + + ++S+I R+
Sbjct: 543 LDAGEEEKGRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGRD 602
Query: 278 MIVRDNRRFCR 288
+++RD R R
Sbjct: 603 IVIRDRNRLHR 613
>gi|356528308|ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 67/243 (27%)
Query: 114 CGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTEN 153
CG G DEG++ F M ++ I F I M + +
Sbjct: 412 CGMLGDIDEGMQHFESMNKDYGIVPSMTHFVSVVDMIGSIGHLDEAFEFIEKMPMKPSAD 471
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPN----NTGAYVILINEA------------- 196
+W TL++ CRVH N L + A+++ ++ + + A ++ + +
Sbjct: 472 IWETLMNLCRVHGNTGLGDCCAELVEQLDSSCLNEQSKAGLVPVKASDLTKEKEKRTLTN 531
Query: 197 -----------------------------LKDLLERMEQEGYVPDTKEVLLDVEEEQKKN 227
L+ L +M++ GYVP+TK VL D+++E K+
Sbjct: 532 KNLLEVRSRVREYRAGDTFHPESDKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEGKEE 591
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
L H ERLA+ +G++++P +RVIKNL K++SK+V RE+I+RD +RF
Sbjct: 592 ALLAHSERLAIAYGLLNSPARAPMRVIKNLRVCGDCHTALKIISKLVGRELIIRDAKRF- 650
Query: 288 RHF 290
HF
Sbjct: 651 HHF 653
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 55/187 (29%)
Query: 155 WLTLLSACRVHRNVELA-------------------------------EKVA-------D 176
W +LLS+CR HRN+E+ E+VA D
Sbjct: 547 WASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRD 606
Query: 177 MILMIEP-----------------NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLD 219
L EP + + + I L+ L +M QEGYVPD VL D
Sbjct: 607 KGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHD 666
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
V++ +K +L +H E+LA+ FG+I P G IRV+KNL + K +SKI RE++
Sbjct: 667 VDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREIL 726
Query: 280 VRDNRRF 286
VRD RF
Sbjct: 727 VRDAARF 733
>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
Length = 789
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE------ 195
F R M + W+ LL ACR+H++ + A + A+ I+ I+P++ +Y +L N
Sbjct: 575 FLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGR 634
Query: 196 ----------------------------------ALKD--------LLERMEQ------- 206
A+KD + ER+++
Sbjct: 635 WDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKS 694
Query: 207 -EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
E YVPD VL DVE+E ++N+L++H E+LAL FG+I T +G+ I +IKNL
Sbjct: 695 EEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHV 754
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+ SK RE++VRD RF HF
Sbjct: 755 VMKLTSKNTKREIVVRDCYRF-HHF 778
>gi|190612973|gb|ACE80864.1| pentatricopeptide repeat protein [Cyathea smithii]
Length = 152
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L+ ++++ GYVPDTK VL DVEEE K++++ YH E+LA+ FG+I+TP G+ +
Sbjct: 52 IYSELQRLIMQVKEAGYVPDTKSVLNDVEEEIKEHVIGYHSEKLAIAFGLIATPTGSPLF 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +S++V RE++VRD RF HF
Sbjct: 112 ITKNLRVCSDCHAVIKFISRVVQREIVVRDVNRF-HHF 148
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I LKDL++R++ EGYVPDT+ VL + ++E K+ L H E+LA+V+G++ TP IR
Sbjct: 801 IYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIR 860
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+ RE++ RD +RF HF
Sbjct: 861 VYKNLRVCSDCHTATKFISKVTGREIVARDAKRF-HHF 897
>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 111/265 (41%), Gaps = 80/265 (30%)
Query: 102 DYAISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSR--- 144
DY I+ S+ + C G +EG +F M+ + + +R R
Sbjct: 285 DY-ITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKR 343
Query: 145 ---IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------- 192
+M +VW LLSACR H N+ + ++VA + +EP+N G YV+L
Sbjct: 344 FIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGM 403
Query: 193 INEALKDLLERMEQ---------------------------------------------- 206
+NEA ++ +ME
Sbjct: 404 LNEA-DEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVK 462
Query: 207 -EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+GYV +T E ++ EE K+ L+YH E++AL FG++S P G IR+ KNL +
Sbjct: 463 KKGYVAET-EFAINTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHT 521
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K S+I RE+IVRD RF HF
Sbjct: 522 VMKFASEIFAREIIVRDINRF-HHF 545
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 79/257 (30%)
Query: 109 SITAGCGQNGPFDEGLKFFGQML----MAKIKARHAPFSRIM-HAGSTEN---------- 153
SI + CG G +EG F M ++ +A F ++ AG E+
Sbjct: 845 SIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPF 904
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVI----------------- 191
VW +LL C++ + EL E+ A IL ++P+N+ A+V+
Sbjct: 905 EDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVD 964
Query: 192 ---LINEALKD-------------------------------LLERME----QEGYVPDT 213
L+++ +K+ +L+++E + GY D
Sbjct: 965 RKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADK 1024
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
LD E+E K+ L YH ER+A+ FG+I+TP TT++++KNL K +S I
Sbjct: 1025 G---LDAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMI 1081
Query: 274 VHREMIVRDNRRFCRHF 290
+ RE+IVRD+ RF HF
Sbjct: 1082 MGREIIVRDSLRF-HHF 1097
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 62/215 (28%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV----------- 190
F + M E VW LL ACRVH + ++ AD + + P +G YV
Sbjct: 468 FIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGR 527
Query: 191 ---------ILINEALKD-----------------------------------LLERMEQ 206
I+ ++ LK L+++M++
Sbjct: 528 WEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKE 587
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD-----GTTIRVIKNLPSLR 261
GYVPD++ L DVEEE K+ L H E+LA+VF +++T + TIR+ KNL
Sbjct: 588 LGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICG 647
Query: 262 GLRHGNKVVSKIVHREMIVRDNRRFCRHFLLFRAC 296
K++S+I RE+I+RD RF H F C
Sbjct: 648 DCHVAAKLISQITSREIIIRDTNRF--HVFRFGVC 680
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 127/307 (41%), Gaps = 105/307 (34%)
Query: 88 VFEIMAVRDFLEYCD----YAISRNSITA------------------------GCGQNGP 119
VFE MAVRD + YAI + + A C G
Sbjct: 279 VFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGL 338
Query: 120 FDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------------VWLTLL 159
+EG ++F M ++ IK + AG E +W TLL
Sbjct: 339 VEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLL 398
Query: 160 SACRVHRNVELAEKV------------ADMILM--------------------------- 180
SAC H NVEL ++V D I++
Sbjct: 399 SACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVK 458
Query: 181 ------IEPNNT--------GAYVIL--INEALKDLLERMEQEGYVPDTKEVL-LDVEEE 223
+E NN G + + +++AL +L++ ++ GYVP+T V D+E+E
Sbjct: 459 IPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADMEDE 518
Query: 224 QKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDN 283
+K+ L YH E+LA+ FG+++TP GTTIRV+KNL K++S I R++I+RD
Sbjct: 519 EKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDV 578
Query: 284 RRFCRHF 290
+RF HF
Sbjct: 579 QRF-HHF 584
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 102/258 (39%), Gaps = 76/258 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI----- 145
I+ S+ C +G +EG F +M M + R A +
Sbjct: 369 ITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFIC 428
Query: 146 -MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------- 194
M +W TLL AC +H N+E+AE V + ++P+N+G +V+L N
Sbjct: 429 EMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKD 488
Query: 195 ------------------------------------------EALKDLLERM----EQEG 208
EA + L E M + G
Sbjct: 489 VSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAG 548
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y P + VL D+EEE+K++ + H E+LA FGI P G +R++KNL K
Sbjct: 549 YAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMK 608
Query: 269 VVSKIVHREMIVRDNRRF 286
++SK+ E+IVRD RF
Sbjct: 609 LISKVYQVEIIVRDRSRF 626
>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
Length = 789
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE------ 195
F R M + W+ LL ACR+H++ + A + A+ I+ I+P++ +Y +L N
Sbjct: 575 FLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGR 634
Query: 196 ----------------------------------ALKD--------LLERMEQ------- 206
A+KD + ER+++
Sbjct: 635 WDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKS 694
Query: 207 -EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
E YVPD VL DVE+E ++N+L++H E+LAL FG+I T +G+ I +IKNL
Sbjct: 695 EEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHV 754
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+ SK RE++VRD RF HF
Sbjct: 755 VMKLTSKNTKREIVVRDCYRF-HHF 778
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + LK L + M++ GY PD V DVE QK+ +L+ H ERLA+ FGIIST GT +R
Sbjct: 599 IFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLR 658
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+ SKI RE+IVRD+ RF HF
Sbjct: 659 IMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRF-HHF 695
>gi|125533129|gb|EAY79677.1| hypothetical protein OsI_34823 [Oryza sativa Indica Group]
Length = 895
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 86 RKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRI 145
R+VF+ M +D A++ ++ G NG E L F M +K
Sbjct: 706 REVFDKMRHKD-------AVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAV--- 755
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLERME 205
+ LSAC ++L + M+ E + Y + L +L M+
Sbjct: 756 ----------VGALSACTRLGALDLGRQAIRMVDWDEFLDNPIY-----KKLDELGLEMK 800
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
GY P T+ V+ DVE+E+K++ L +H E+LA+ F ++ T G TIRV KNL
Sbjct: 801 TMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHT 860
Query: 266 GNKVVSKIVHREMIVRDNRRF 286
K+VS+I HRE+IVRDN RF
Sbjct: 861 AIKLVSRITHREIIVRDNNRF 881
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 72/255 (28%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM---LMAKIKARH--APFSRIMHAGSTEN----- 153
+I+ I C G +EG K+FG M M + + H + AG E
Sbjct: 301 SITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVI 360
Query: 154 ----------VWLTLLSACRVHRNVELAE---------KVADMILM-------------- 180
+W LLSACR+HR EL E + D +L+
Sbjct: 361 KEMRMEPDIVIWRALLSACRIHRKKELGEVAIANISRLESGDFVLLSNMYCSLNNWDGAE 420
Query: 181 ----------IEPNNTGAYVIL-------------------INEALKDLLERMEQEGYVP 211
+ + ++V L I L+ L++R + EG+ P
Sbjct: 421 RVRRMMKTRGVRKSRGKSWVELGDGIHQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGFTP 480
Query: 212 DTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVS 271
T VL+DV EE+K+ L +H E+LA+ + ++ T GT IR+ KNL + K+VS
Sbjct: 481 LTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHNWIKIVS 540
Query: 272 KIVHREMIVRDNRRF 286
KI++R++IVRD RF
Sbjct: 541 KILNRKIIVRDRIRF 555
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 97/231 (41%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G E L F M M H G+ W LL ACR+++N EL E
Sbjct: 392 GRAGRLKEALNFINSMPMRP------------HVGA----WSALLHACRMYKNKELGEIA 435
Query: 175 ADMILMIEPNNTGAYVILIN--------EALKDLLERMEQEG------------------ 208
I+ +E N GAYV+L N E++ L + M+ +G
Sbjct: 436 QRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHE 495
Query: 209 -----------------------------YVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
YV +T VL D+EEE+K++ L H E++A+
Sbjct: 496 FIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHSEKVAIA 555
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG+IS IRV+ NL + K++SKI +RE+IVRD RF HF
Sbjct: 556 FGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRF-HHF 605
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+++++R+ + GYV DTKEVLLD+EE+ K+ L YH E+LA+ F ++ T GT +R
Sbjct: 465 IYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTPVR 524
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K++SK+ RE++VRD RF HF
Sbjct: 525 IIKNLRICGDCHLVMKMISKLFSREIVVRDCNRF-HHF 561
>gi|190612979|gb|ACE80867.1| pentatricopeptide repeat protein [Lygodium japonicum]
Length = 152
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 183 PNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
P+ T Y L L M++ GY PDTK VL DV+E K+ ++ YH E+LAL FG+
Sbjct: 47 PSTTKIYA-----ELDRLTFEMKKAGYAPDTKVVLHDVDEVAKEQMVCYHSEKLALAFGL 101
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
ISTP T++R+IKNL K +SK+ RE++VRD RF
Sbjct: 102 ISTPQRTSLRIIKNLRMCPDCHSAFKFISKLTGREILVRDASRF 145
>gi|190612955|gb|ACE80855.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I E L + M++ GYVPDT VL D++EE+K+ L H E+LA+ FG+ISTP GT
Sbjct: 49 IVGILEELDRISGLMKEAGYVPDTSLVLHDLDEEEKEVRLCRHSEKLAIAFGLISTPPGT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T+R+ KNL K ++KI RE+IVRD RF HF
Sbjct: 109 TLRIFKNLRVCSDCHTATKFIAKITGREIIVRDANRF-HHF 148
>gi|383157262|gb|AFG60954.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157264|gb|AFG60955.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157270|gb|AFG60958.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157272|gb|AFG60959.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157282|gb|AFG60964.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M++ GYVP T VL DVEEE K+ +L+ H E+LA+ FG+I+T G IR
Sbjct: 42 IYAMLETLYGQMKEAGYVPKTNPVLQDVEEEMKETVLFSHSEKLAIAFGVINTSPGNPIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + K +SKIV R +IVRD RF HF
Sbjct: 102 IVKNLHMCTDCHNAIKFISKIVGRVIIVRDANRF-HHF 138
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 80/264 (30%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM------------------LMAKI----KARHAP 141
I+ + + C +G DEGL+ F M L+ + +A
Sbjct: 394 GITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVM 453
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
+S M + VW LL ACR H +VEL E+V ++L +EP N+G Y +L N
Sbjct: 454 YSMPMEPSAA--VWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGR 511
Query: 195 -EALKDLLERMEQEGYVPDTKEVLLDVE------------EEQKKNI------------- 228
+ + ++ + M++ G T ++D + Q KNI
Sbjct: 512 WDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKM 571
Query: 229 ----------------------LYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
L YH E+LA+ FG+I+T GTTI V+KNL
Sbjct: 572 EGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSA 631
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K++S++ RE+IVRD R+ HF
Sbjct: 632 FKLISQVYDREIIVRDRARY-HHF 654
>gi|294464543|gb|ADE77782.1| unknown [Picea sitchensis]
Length = 210
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 56/193 (29%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EAL 197
+VW LL ACR+H N ELA+++A+ +L +E G YV+L N + +
Sbjct: 8 SVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLM 67
Query: 198 KD----------------------------------------LLERMEQEGYVPDTKEVL 217
KD L +M+ GYVP+ VL
Sbjct: 68 KDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVL 127
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DVE+++K+ L +H E+LA+ FGII+T GTTIRV KNL K +S R+
Sbjct: 128 QDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFISLNFTRK 187
Query: 278 MIVRDNRRFCRHF 290
++VRD RF HF
Sbjct: 188 IVVRDANRF-HHF 199
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 121/317 (38%), Gaps = 121/317 (38%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S RK+F ++ RD + + N+I A CG +G + L F ++ IK HA F+
Sbjct: 361 SARKLFNKLSSRDLVLW-------NAIIACCGTHGCGHDALALFQELNETGIKPDHATFA 413
Query: 144 RIM----HAGSTEN---------------------------------------------- 153
++ H+G E
Sbjct: 414 SLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQT 473
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------I 193
+W+ LLS C ++ +EL E +A IL + P + G ++ I
Sbjct: 474 EPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREI 533
Query: 194 NEALKD----------------------------------------LLERMEQEGYVPDT 213
+ +KD L M + GYVP T
Sbjct: 534 RKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRT 593
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ V D++E+Q +L YH ERLA+ FG+++T GT + +IKNL K +SKI
Sbjct: 594 EFVYHDLDEDQ---LLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKI 650
Query: 274 VHREMIVRDNRRFCRHF 290
V RE++VRD +RF HF
Sbjct: 651 VDREIVVRDAKRF-HHF 666
>gi|383135477|gb|AFG48749.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+EGYVPDT VL DV EEQK + L+ H E+LA+ FGII+TP T+IRV+KNL
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTSIRVLKNLRVCGDCHS 60
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I+RD +RF HF
Sbjct: 61 VIKFISKVYEREIILRDTKRF-HHF 84
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVW---- 155
I+ S+ + C +G DEGL+ F M L + A + AG + W
Sbjct: 552 ITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIE 611
Query: 156 -------LTLLSA----CRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EA 196
+T+ A C++H+N+E+ EK A + + P+ G +V+L N
Sbjct: 612 NMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSK 671
Query: 197 LKDLLERMEQEG-----------------------------------------------Y 209
+ ++ + ME++G Y
Sbjct: 672 VAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGY 731
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VPDT ++LDVE++ ++ +L H E+LA+ FG+++T GTTI V KNL + K
Sbjct: 732 VPDT-NLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKY 790
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S + RE+IVRD +RF HF
Sbjct: 791 ISLVTGREIIVRDMQRF-HHF 810
>gi|383157266|gb|AFG60956.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157268|gb|AFG60957.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157274|gb|AFG60960.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M++ GYVP T VL DVEEE K+ +L+ H E+LA+ FG+I+T G IR
Sbjct: 42 IYAMLETLYGQMKEAGYVPKTNPVLQDVEEEMKETVLFSHSEKLAIAFGVINTSPGNPIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + K +SKIV R +IVRD RF HF
Sbjct: 102 IVKNLRMCTDCHNAIKFISKIVGRVIIVRDANRF-HHF 138
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 100/254 (39%), Gaps = 75/254 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSRIMHAG 149
+ C G DEG +F M M + R F R M
Sbjct: 346 VLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMK 405
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W TL++ACR H +EL E + +L P + YV+L N
Sbjct: 406 PNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIR 465
Query: 195 ------------------------------------EALKDLLERMEQE----GYVPDTK 214
+ + ++E M +E G++ T
Sbjct: 466 REMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATS 525
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLLD++EE K+ L +H E+LA+ F ++ TP GT +RV+KNL K +S++
Sbjct: 526 EVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVY 585
Query: 275 HREMIVRDNRRFCR 288
+RE++VRD RF R
Sbjct: 586 NREIVVRDRSRFHR 599
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN------ 153
IS + + C Q+G +EG +F M + A+++ + + AG E
Sbjct: 488 ISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIR 547
Query: 154 ---------VWLTLLSACRVHRNVELAE-------------------------------- 172
VW LLS+CRVH NV L E
Sbjct: 548 RMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNE 607
Query: 173 --KVADMI---------------------LMIEPNNTGAYVILINEALKDLLERMEQEGY 209
+V DM+ +++ + + + I E L L M++ GY
Sbjct: 608 VNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGY 667
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
P+ VL DVEE+ K+ IL H E+LA+VFG+++TP G ++VIKNL K
Sbjct: 668 FPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKF 727
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S RE+ VRD RF HF
Sbjct: 728 ISSFERREIFVRDTNRF-HHF 747
>gi|147799436|emb|CAN76870.1| hypothetical protein VITISV_012312 [Vitis vinifera]
Length = 420
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 119/319 (37%), Gaps = 119/319 (37%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF----S 143
VF+ M R+ IS NS+ G QNG E L + +ML +K + F S
Sbjct: 67 VFKRMLTRN-------VISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLS 119
Query: 144 RIMHAGSTEN-------------------------------------------------- 153
MHAG E
Sbjct: 120 ACMHAGLVERGQGYFYSISKIHGXNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNC 179
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W TLLS CR++ +V E A + ++P+N G Y++L N
Sbjct: 180 LIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLM 239
Query: 195 ---------------------------------EALKDLLER----MEQEGYVPDTKEVL 217
E + D L R +++ G+ PDT VL
Sbjct: 240 KNNKIKKFAAYSWIEIDSQVHKFVAEDRTHSETEQIYDKLNRLIKKLQESGFTPDTNLVL 299
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDG-TTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
DV EE+K + + YH E+LAL F +I P G T IR++KN+ K VSKI+ R
Sbjct: 300 HDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRR 359
Query: 277 EMIVRDNRRFCRHFLLFRA 295
+I+RD RF HF+ RA
Sbjct: 360 PIILRDINRF-HHFVEGRA 377
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 105/257 (40%), Gaps = 77/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTENVWL------- 156
S+ A C G DEG K+F M L ++ + AG + W
Sbjct: 428 SVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPI 487
Query: 157 --------TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+L AC++H+NVELAE+ A +I + P +V+L N
Sbjct: 488 EPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARV 547
Query: 195 ----------------------------------EALKDLLERMEQ-------EGYVPDT 213
+ KD+ R+ + GYVPDT
Sbjct: 548 RTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDT 607
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ DVE++ K +L H E+LA+ +G+I T GTTI++ KNL + K++S +
Sbjct: 608 DSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLL 666
Query: 274 VHREMIVRDNRRFCRHF 290
RE+I+RD +RF HF
Sbjct: 667 TGREIIMRDIQRF-HHF 682
>gi|383157260|gb|AFG60953.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M++ GYVP T VL DVEEE K+ +L+ H E+LA+ FG+I+T G IR
Sbjct: 42 IYAMLETLYGQMKEAGYVPKTNPVLQDVEEEMKETVLFSHSEKLAIAFGVINTSPGNPIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + K +SKIV R +IVRD RF HF
Sbjct: 102 IVKNLHICTDCHNAIKFISKIVGRVIIVRDANRF-HHF 138
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 105/253 (41%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM-AKIKARHAPFSRIM----HAGSTEN---------- 153
S+ C +G EG + F +ML K++ + ++ AG E
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
+W T LS CRV +N+EL + A +L + +N G Y+++ N
Sbjct: 400 EKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVART 459
Query: 195 -------------------------------------EALKDLLERMEQ----EGYVPDT 213
+ + +L +ME EGY PD
Sbjct: 460 RTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
++LL+V+EE+KK L H +++A+ FG++ TP G+ I++ +NL K +S I
Sbjct: 520 TQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMI 579
Query: 274 VHREMIVRDNRRF 286
RE++VRD RF
Sbjct: 580 YEREIVVRDRNRF 592
>gi|190612829|gb|ACE80792.1| pentatricopeptide repeat protein [Pilularia globulifera]
Length = 152
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 204 MEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGL 263
M+ EGYVPDT VL DVEEE K+++L YH E+LA+ FG+ISTP G + V+KNL
Sbjct: 63 MKAEGYVPDTNLVLHDVEEELKEHLLKYHSEKLAIAFGLISTPPGAPLHVVKNLRLCSDC 122
Query: 264 RHGNKVVSKIVHREMIVRDNRRFCR 288
K +SK+ RE+I+RD RF R
Sbjct: 123 HTAAKFISKLRGREIIMRDYNRFHR 147
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 99/245 (40%), Gaps = 76/245 (31%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I+ NS C G+ G +E R+ PF W
Sbjct: 578 DYGITPNSKHYNCMIDLLGRAGLLEEAHNLM----------RNMPFE------PDAATWG 621
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA--------LKDLLERMEQEG 208
LL A R+H N EL EK A+M+ +EPNN G YV+L N + L +M Q G
Sbjct: 622 ALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLG 681
Query: 209 ------------------------YVPDTKEVLLDVEE---------------------- 222
+ P+ + +EE
Sbjct: 682 IQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVE 741
Query: 223 -EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E+KK +L YH E+LA+ FGI++ P G IRV+KNL + K +SKIV R +I+R
Sbjct: 742 EEEKKRMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHNVIKYISKIVGRLIILR 801
Query: 282 DNRRF 286
D+ RF
Sbjct: 802 DSHRF 806
>gi|357130926|ref|XP_003567095.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Brachypodium distachyon]
Length = 771
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 69/250 (27%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S++K F I D YA SI + GQ+G DE +F +M +
Sbjct: 537 SMQKDFGITPAMDH-----YA----SIVSMLGQSGYLDEAREFIERMPVEP--------- 578
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP-------------------- 183
+ +VW +L++ CR++ ++EL ++ A +I ++P
Sbjct: 579 -------SIDVWESLMNMCRLNGSMELGDRCAQIIECLDPSRLNEQSKMGLFPINASDLA 631
Query: 184 -----------------------NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDV 220
+ + I E L+ L M++ GY+ DT+ VL DV
Sbjct: 632 KEKERKKANSVEARSKVHEYRAGDRSHPETFRIYEELRYLSAHMKEAGYIADTRFVLHDV 691
Query: 221 EEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIV 280
++E K++ L H ERLA+ +G+I++ + IRVIKNL S K++SK+V R++I
Sbjct: 692 DQETKEDALLAHSERLAVSYGLITSAVRSPIRVIKNLRSCGDCHTAFKIISKLVGRQIIA 751
Query: 281 RDNRRFCRHF 290
RD +RF HF
Sbjct: 752 RDAKRF-HHF 760
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 83/190 (43%), Gaps = 55/190 (28%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------INEALK 198
VW TLL ACR H N+E+ E A ++ +EP + YV+L I A++
Sbjct: 621 VWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMR 680
Query: 199 D----------------------------------------LLERMEQEGYVPDTKEVLL 218
D L+ +++ GYVPDT VL
Sbjct: 681 DNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLH 740
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ +E K+ L H E++A+ FG+I+T IR+ KNL K +SK RE+
Sbjct: 741 DMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREI 800
Query: 279 IVRDNRRFCR 288
I+RD+ RF R
Sbjct: 801 ILRDSNRFHR 810
>gi|302818616|ref|XP_002990981.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
gi|300141312|gb|EFJ08025.1| hypothetical protein SELMODRAFT_132724 [Selaginella moellendorffii]
Length = 578
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALKD 199
W+TLL C++H ++E + IL + P +TG Y+++ N +++ D
Sbjct: 378 WITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVD 437
Query: 200 L------------------------------------LER----MEQEGYVPDTKEVLLD 219
L LER M++ G+V DTK V+ D
Sbjct: 438 LGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNDKMKRAGFVCDTKAVVYD 497
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
++ ++K+++L H E+LA+ FG+IST G +R++KNL K +S +V RE++
Sbjct: 498 LQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIV 557
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 558 VRDAYRF-HHF 567
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 104/258 (40%), Gaps = 77/258 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLM-----------AKIKARHAPFSRI---------MHA 148
++ +GC G ++G K F +M M A + RI M
Sbjct: 237 ALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPM 296
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV----ILINEALKD----- 199
++ ++W +LL++CR+H V LAE +A+ + +EP N G YV I N + D
Sbjct: 297 KTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMV 356
Query: 200 -----------------------------------------------LLERMEQEGYVPD 212
L E ME+ GY+P+
Sbjct: 357 REMMQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPN 416
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
T VL DV EE K + H ERLA VF +I T G IR+ KNL K+VS+
Sbjct: 417 TDVVLHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSR 476
Query: 273 IVHREMIVRDNRRFCRHF 290
+ R +++RD RF HF
Sbjct: 477 VTGRVIVLRDTNRF-HHF 493
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMHA------G 149
+ + C G EGL +F M + + R R M
Sbjct: 772 VLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ +W TLLSAC +H+N+E+ E+ A +L +EP ++ YV++ N
Sbjct: 832 ADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSR 891
Query: 195 EALKD----------------------------------------LLERMEQEGYVPDTK 214
+ +KD L R + GYV D+
Sbjct: 892 KLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSF 951
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+L + E+ QK I + H E+LA+ FG++S + IRV+KNL + K VSKI
Sbjct: 952 SLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKIS 1011
Query: 275 HREMIVRDNRRFCRHF 290
+R +IVRD RF HF
Sbjct: 1012 NRSIIVRDAHRF-HHF 1026
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIK---------------ARHAPFSRIMHA 148
S+ C G D+GL ++ + L I+ A F M
Sbjct: 772 SLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 831
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVA----------DMILMIEPN---NTGAY------ 189
+ VW +LL++C++HR+++ K A D + ++ N TG +
Sbjct: 832 KPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENV 891
Query: 190 ------------------------------------VILINEALKDLLERMEQEGYVPDT 213
+ I L+D+ + +++ GYV DT
Sbjct: 892 RKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADT 951
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
+ L D +EEQK++ L+ H ERLAL + ++STP+G+T+R+ KNL K VS++
Sbjct: 952 SQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRV 1011
Query: 274 VHREMIVRDNRRFCRHF 290
+ R +++RD RF HF
Sbjct: 1012 IGRRIVLRDQYRF-HHF 1027
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 86/191 (45%), Gaps = 56/191 (29%)
Query: 155 WLTLLSACRVHRNVELAEKVA---------------------------DMILMI------ 181
W LL+AC +HRN L K+A D + MI
Sbjct: 500 WRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRE 559
Query: 182 -----EPNNTGAYV-----------------ILINEALKDLLERMEQEGYVPDTKEVLLD 219
EP + + I I ++ LLE ++Q GYVP+ + VL D
Sbjct: 560 RNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHD 619
Query: 220 VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMI 279
VE+EQK++ L YH E+LA+ +G++ P IRVIKNL K++SK+ +R +I
Sbjct: 620 VEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLII 679
Query: 280 VRDNRRFCRHF 290
VRD RF HF
Sbjct: 680 VRDASRF-HHF 689
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 55/198 (27%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL ACRVH N +L E + ++ +EPNN YV+L N
Sbjct: 361 IWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMS 420
Query: 195 --------------------------------EALKDLLE----RMEQEGYVPDTKEVLL 218
EA+ L+ ++++ GYV T L
Sbjct: 421 LRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALY 480
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K++ + YH E+LAL FG++++P T+R++KNL KV+S + R +
Sbjct: 481 DIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYI 540
Query: 279 IVRDNRRFCRHFLLFRAC 296
+VRD RF + F +C
Sbjct: 541 VVRDRNRFHHFYEGFCSC 558
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMHA------G 149
+ + C G EGL +F M + + R R M
Sbjct: 772 VLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+ +W TLLSAC +H+N+E+ E+ A +L +EP ++ YV++ N
Sbjct: 832 ADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSR 891
Query: 195 EALKD----------------------------------------LLERMEQEGYVPDTK 214
+ +KD L R + GYV D+
Sbjct: 892 KLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSF 951
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+L + E+ QK I + H E+LA+ FG++S + IRV+KNL + K VSKI
Sbjct: 952 SLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKIS 1011
Query: 275 HREMIVRDNRRFCRHF 290
+R +IVRD RF HF
Sbjct: 1012 NRSIIVRDAHRF-HHF 1026
>gi|326524233|dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 86/192 (44%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMI--------------------------------LMI 181
VW TLLSACRVH+++E A+ ++ + LM+
Sbjct: 490 VWKTLLSACRVHKDMEHAKLASESLIQLEQCDAGSYVMLSNMYATHSKWRDTSKLRSLML 549
Query: 182 E--------------PNNTGAYVI---------LINEALKDLLERMEQEGYVPDTKEVLL 218
E N +V I L+ L+ER+++ GY V
Sbjct: 550 ERGVRKQPGRSWIHLKNTVHTFVAGDAAHPRSSEIYTYLEKLMERLKELGYTSRIDLVAH 609
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEEEQ++ L +H E+LA+ FGIISTP GT +R+ KNL K VS+ RE+
Sbjct: 610 DVEEEQRETALKFHSEKLAMAFGIISTPSGTPLRIFKNLRICVDCHEAIKYVSRATDREI 669
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 670 VVRDLYRF-HHF 680
>gi|297735282|emb|CBI17644.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 48/223 (21%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM--------------LMA 133
AVR F + I+ N ++ C G +EG K+F M M
Sbjct: 418 AVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMV 477
Query: 134 KIKARHAPFSRI---MHAGSTE---NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R + I +H + +VW + LS+ R H P +T
Sbjct: 478 DLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSYRSH-----------------PQDTK 520
Query: 188 AYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPD 247
Y L +L+ R+++ GY D V+ DVE+EQ++ +L YH E+LA+ +GIIST
Sbjct: 521 IY-----SYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAP 575
Query: 248 GTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
GT IRV+KNL + K S+++ RE+I+RD RF HF
Sbjct: 576 GTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRF-HHF 617
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 55/198 (27%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W LL ACRVH N +L E + ++ +EPNN YV+L N
Sbjct: 361 IWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMN 420
Query: 195 --------------------------------EALKDLLE----RMEQEGYVPDTKEVLL 218
EA+ L+ ++++ GYV T L
Sbjct: 421 LRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDMALY 480
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+E+E+K++ + YH E+LAL FG++++P T+R++KNL KV+S + R +
Sbjct: 481 DIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYKRYI 540
Query: 279 IVRDNRRFCRHFLLFRAC 296
+VRD RF + F +C
Sbjct: 541 VVRDRNRFHHFYEGFCSC 558
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 75/253 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIK--ARHAPFSRIMHA 148
++ + C G D+G+ ++ M L+ ++ A F M
Sbjct: 657 ALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV 716
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGA-------------------- 188
+ +W +LLS+ R H+N+++ K A +L ++P + A
Sbjct: 717 LPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKL 776
Query: 189 ----------------YVILINEA-------------------LKDLLERMEQEGYVPDT 213
++ L NE L ++L ++ + GYV DT
Sbjct: 777 RSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADT 836
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L D +EEQK++ L+ H E+LAL +G++ P+G+TIR+ KNL K+VS +
Sbjct: 837 SSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMV 896
Query: 274 VHREMIVRDNRRF 286
HRE+++RD RF
Sbjct: 897 FHREIVLRDPYRF 909
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + LK L + M+ GY PD V DVE QK+ +L+ H ERLA+ FGIIST GT +R
Sbjct: 572 IFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLR 631
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K+ SKI RE+IVRD+ RF HF
Sbjct: 632 IMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRF-HHF 668
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 77/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRIMH--A 148
S+ + C +G + GLK F M L+ + + + IM
Sbjct: 544 SVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
NV+ +L AC++H+NV AEKVA+ + + P + G +V+L N
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQV 663
Query: 195 -------------------------------------EALKDLLERM----EQEGYVPDT 213
+ + LE++ ++ GYVPDT
Sbjct: 664 RVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDT 723
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
++L +E++ K+ +L H E+LA+ FG+++T GTTI V KNL + K +S +
Sbjct: 724 N-LILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLV 782
Query: 274 VHREMIVRDNRRFCRHF 290
RE+IVRD +RF HF
Sbjct: 783 TGREIIVRDMQRF-HHF 798
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------------LMAKIKARHAPFSRIMHAG 149
+ + C G D+G+++F M A + +R F M
Sbjct: 782 VLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIE 841
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------EALKDLL- 201
VW TLLSAC VH+N+E+ E A +L +EP ++ YV+L N +DL
Sbjct: 842 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTR 901
Query: 202 ERMEQEG-----------------------------------------------YVPDTK 214
++M+++G YV D
Sbjct: 902 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCF 961
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+L ++++EQK ++ H E+LA+ FG++S P I V+KNL K VSK+
Sbjct: 962 SLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVS 1021
Query: 275 HREMIVRDNRRFCRHF 290
+RE+IVRD RF HF
Sbjct: 1022 NREIIVRDAYRF-HHF 1036
>gi|383135465|gb|AFG48743.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+EGYVPDT VL DV EEQK + L+ H E+LA+ FGII+TP T IRV+KNL
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTPIRVVKNLRVCGDCHS 60
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I+RD +RF HF
Sbjct: 61 VIKFISKVYEREIILRDTKRF-HHF 84
>gi|358357160|gb|AEU08420.1| pentatricopeptide repeat protein [Physcomitrium pyriforme]
Length = 152
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I LKDL++R++ EGYVPDT+ VL + ++E K+ L H E+LA+V+G++ TP IR
Sbjct: 52 IYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTPHRNPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+ RE++ RD +RF HF
Sbjct: 112 VYKNLRVCSDCHTATKFISKVTGREIVARDAKRF-HHF 148
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 101/262 (38%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFS------ 143
AI+ ++ + C +G EG K+F M+ M + R
Sbjct: 642 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 701
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------- 190
M +W LL +CR+H+N++ AE A + +EPNN+ Y+
Sbjct: 702 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 761
Query: 191 ----------------------ILINE--------------------ALKDLLERMEQEG 208
I IN+ L L+ M++ G
Sbjct: 762 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 821
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD V +++E +K+ IL H E+LA+ +G+I G IRVIKN K
Sbjct: 822 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 881
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+S + RE+ +RD RF HF
Sbjct: 882 YISLVKARELFLRDGVRF-HHF 902
>gi|358357246|gb|AEU08463.1| pentatricopeptide repeat protein [Pogonatum urnigerum]
Length = 152
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L L + M++ GYVPDT+ VL DV+++QK+ L H E+LA+ +G+ISTP GT IRV KN
Sbjct: 56 LNRLTQEMKKAGYVPDTQIVLHDVDKQQKEEALCSHSEKLAIAYGLISTPPGTPIRVFKN 115
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +S + RE++ RD RF HF
Sbjct: 116 LRVCSDCHAATKFISMVTGREIVARDGSRF-HHF 148
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+++ R+ Q GYVPDT VL+DV+E++K+++L H E+LA+ +G+I+T G IRV+KN
Sbjct: 725 LQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKN 784
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
L K+VSK+ RE+ VRDN R+ HF
Sbjct: 785 LRMCSDCHSFAKLVSKLYGREITVRDNNRY--HFF 817
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W + L+ACR H+NVE A + I + P G +V+L N
Sbjct: 627 IWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSN 667
>gi|190612873|gb|ACE80814.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ T + I+ L+ L E+M++ GYVPDT+ VL DVEEE+K L +H E+LA+ FG++
Sbjct: 43 DQTHPQIKEIHAELERLSEQMKEAGYVPDTRLVLHDVEEEEKILRLCHHSEKLAIAFGLL 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ST GT +R+ KNL K+++K+ RE++VRD RF HF
Sbjct: 103 STVPGTPLRIYKNLRVCTDCHTATKIIAKVEGREIVVRDANRF-HHF 148
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 64/213 (30%)
Query: 146 MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------EAL 197
M A T +W+ LLS C ++ +EL E +AD IL ++P++ G ++ N + +
Sbjct: 472 MKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKV 531
Query: 198 KDLLERMEQEG-----------------------------------------------YV 210
+ + + M+ G Y+
Sbjct: 532 RQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYI 591
Query: 211 PDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVV 270
P T+ V D+EEE K+ L YH ERLA+ FG+++T GT + +IKNL K +
Sbjct: 592 PRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYI 651
Query: 271 SKIVHREMIVRDNRRF---------CRHFLLFR 294
SKI RE++VRD +RF CR + L R
Sbjct: 652 SKIADREIVVRDAKRFHHFKDGVCSCRDYWLPR 684
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 199 DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLP 258
++ E +++ G+VPD VL DV++E K+ +L H E+LA+ FG+ISTP+ TT+R++KNL
Sbjct: 886 EMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLR 945
Query: 259 SLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK V RE+IVRD RF HF
Sbjct: 946 VCNDCHTAIKFISKFVDREIIVRDATRF-HHF 976
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 20/110 (18%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFSR 144
I+ + + C G D+G +++ QM M + AR F +
Sbjct: 717 ITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQ 776
Query: 145 IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
M VW +LL+ACRV +N +LAE A +L I+P+N+GAY L N
Sbjct: 777 RMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALAN 826
>gi|367064031|gb|AEX12062.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 55/159 (34%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW LL+ACR+H NV+L E+VA + ++ N YV+L N
Sbjct: 1 VWGCLLAACRIHTNVDLGERVAKSLFELDSKNASYYVLLSNLYAACSRWDDVKRVRKIMK 60
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
E + D+LE+ M GYVP+ L
Sbjct: 61 DQGIQKMPGSSWIEVNGKVYAFLVGDKSHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALH 120
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
DVEEEQK+NIL +H E+LA+ FG+++T GTTIR+ KNL
Sbjct: 121 DVEEEQKENILGHHSEKLAIAFGLMNTSCGTTIRITKNL 159
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 197 LKDLLERMEQEGYVPDTKEVL-LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
L++L RM++ GYV ++ ++ +DVEEE K+ I+ H ERLAL FG+IS P G TIRV+K
Sbjct: 502 LRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTIRVMK 561
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
NL R K++S+IV R+ +VRD RF HF
Sbjct: 562 NLRMCRDCHEAFKLISEIVERDFVVRDVNRF-HHF 595
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------- 192
+W +LL A ++H N+E+ E ++ +EP +G YV+L
Sbjct: 390 LWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMK 449
Query: 193 --------------INEALKDLLE--------------------RMEQEGYVPDTKEVLL 218
IN A+ + L R+ + G+ P T EVL
Sbjct: 450 DHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLF 509
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVEEE K++ L YH ERLA+ F +I++ IR+IKNL K++S R++
Sbjct: 510 DVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDI 569
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 570 IVRDRNRF-HHF 580
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 33/204 (16%)
Query: 116 QNGPFDEGLKFFGQMLMA-----KIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVEL 170
Q P D GL +G ML A ++ +I G E V+ LL+ ++ N +
Sbjct: 524 QKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLA--NIYANASM 581
Query: 171 AEKVADMILMIEPN---NTGAYVIL---------------------INEALKDLLERMEQ 206
+ VA + +E N T + I+ I L L+E ++
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GYVPDT + DVE++ K +L H E+LA+ FG+I T GTTI++ KNL +
Sbjct: 642 VGYVPDTDSIH-DVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K++S + RE+I+RD +RF HF
Sbjct: 701 TKLISLVTGREIIMRDIQRF-HHF 723
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL+D++ R+ + GY P+T VL D+ EE+K+ L YH E+LA+ FG+I+TP G T+R
Sbjct: 480 IYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLR 539
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL K++SK R +++RD RF R
Sbjct: 540 VIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHR 575
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 103/261 (39%), Gaps = 86/261 (32%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN---------------- 153
+ C G DEG +F +M K + RI H G +
Sbjct: 344 VLYACSHCGMLDEGFNYFRRM-----KEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIR 398
Query: 154 ---------VWLTLLSACRVHRNVELAE-------------------------------- 172
+W TLL AC +H ++EL E
Sbjct: 399 NMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLD 458
Query: 173 --KVADMILMIEPNNTGAYVIL-----------------INEALKDLLERMEQ----EGY 209
V ++LM T Y ++ +E +L ++ Q EGY
Sbjct: 459 VQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGY 518
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP T VL D+EEE+K+ L +H E++A+ F +++TP GT IR++KNL K+
Sbjct: 519 VPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKL 578
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD RF HF
Sbjct: 579 ISKVFEREIIVRDRSRF-HHF 598
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LIN L+ L + + GY P VLLDVE+++K+ +L+ H ERLAL FG++ P G I
Sbjct: 613 LINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPI 672
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+IKNL K++SKIV R++IVRD RF HF
Sbjct: 673 RIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRF-HHF 710
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G D+ +KF + PF + +W LL AC +H +VEL
Sbjct: 497 GRSGNLDQAVKFIEDI----------PFE------PSVMIWRALLGACVIHNDVELGRIS 540
Query: 175 ADMILMIEPNNTGAYVILIN 194
A +L +EP + ++V+L N
Sbjct: 541 AQRVLELEPRDEASHVLLSN 560
>gi|383135459|gb|AFG48740.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135461|gb|AFG48741.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135463|gb|AFG48742.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135467|gb|AFG48744.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135469|gb|AFG48745.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135471|gb|AFG48746.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135473|gb|AFG48747.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135475|gb|AFG48748.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135479|gb|AFG48750.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135481|gb|AFG48751.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135485|gb|AFG48753.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+EGYVPDT VL DV EEQK + L+ H E+LA+ FGII+TP T IRV+KNL
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTPIRVLKNLRVCGDCHS 60
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I+RD +RF HF
Sbjct: 61 VIKFISKVYEREIILRDTKRF-HHF 84
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 84/193 (43%), Gaps = 55/193 (28%)
Query: 151 TENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINE--------------- 195
TE+VW LL+ CR+H N ELA VAD + + ++G V+L N
Sbjct: 378 TESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARK 437
Query: 196 ---------------------------------ALKDLLERMEQ-------EGYVPDTKE 215
+++ E++E+ GYV DT
Sbjct: 438 MMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSF 497
Query: 216 VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVH 275
VL +V+ ++K + YH ERLA+ FG+I+ P IRV+KNL K +SK
Sbjct: 498 VLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTG 557
Query: 276 REMIVRDNRRFCR 288
R +IVRDN RF R
Sbjct: 558 RVIIVRDNNRFHR 570
>gi|222630733|gb|EEE62865.1| hypothetical protein OsJ_17668 [Oryza sativa Japonica Group]
Length = 620
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL+D++ R+ + GY P+T VL D+ EE+K+ L YH E+LA+ FG+I+TP G T+R
Sbjct: 309 IYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLR 368
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL K++SK R +++RD RF R
Sbjct: 369 VIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHR 404
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------- 192
+W +LL A R+H N+ + E ++ +EP +G YV+L
Sbjct: 539 LWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMK 598
Query: 193 --------------INEALKDLL--------------------ERMEQEGYVPDTKEVLL 218
I A+ + L R+E+ G+ T E L
Sbjct: 599 HHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALF 658
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE K+ +L YH ERLA+ F +I++P IR+IKNL K++S HRE+
Sbjct: 659 DLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREI 718
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 719 IVRDRNRF-HHF 729
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 103/261 (39%), Gaps = 86/261 (32%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTEN---------------- 153
+ C G DEG +F +M K + RI H G +
Sbjct: 344 VLYACSHCGMLDEGFNYFRRM-----KEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIR 398
Query: 154 ---------VWLTLLSACRVHRNVELAE-------------------------------- 172
+W TLL AC +H ++EL E
Sbjct: 399 NMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLD 458
Query: 173 --KVADMILMIEPNNTGAYVIL-----------------INEALKDLLERMEQ----EGY 209
V ++LM T Y ++ +E +L ++ Q EGY
Sbjct: 459 VQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGY 518
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
VP T VL D+EEE+K+ L +H E++A+ F +++TP GT IR++KNL K+
Sbjct: 519 VPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKL 578
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+SK+ RE+IVRD RF HF
Sbjct: 579 ISKVFEREIIVRDRSRF-HHF 598
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 119/315 (37%), Gaps = 119/315 (37%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPF----S 143
VF+ M R+ IS NS+ G QNG E L + +ML +K + F S
Sbjct: 379 VFKRMLTRN-------VISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLS 431
Query: 144 RIMHAGSTEN-------------------------------------------------- 153
MHAG E
Sbjct: 432 ACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNC 491
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLL 201
+W TLLS CR++ +V E A + ++P+N G Y++L N A++ L+
Sbjct: 492 LIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLM 551
Query: 202 --------------------------------------------ERMEQEGYVPDTKEVL 217
+++++ G+ PDT VL
Sbjct: 552 KNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVL 611
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDG-TTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
DV EE+K + + YH E+LAL F +I P G T IR++KN+ K VSKI+ R
Sbjct: 612 HDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRR 671
Query: 277 EMIVRDNRRFCRHFL 291
+I+RD RF HF+
Sbjct: 672 PIILRDINRF-HHFI 685
>gi|383135457|gb|AFG48739.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+EGYVPDT VL DV EEQK + L+ H E+LA+ FGII TP T IRV+KNL
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIIKTPPRTPIRVLKNLRVCGDCHS 60
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I+RD +RF HF
Sbjct: 61 VIKFISKVYEREIILRDTKRF-HHF 84
>gi|144923519|gb|ABP02617.1| Ankyrin; Pentatricopeptide repeat [Medicago truncatula]
Length = 293
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 99/245 (40%), Gaps = 76/245 (31%)
Query: 102 DYAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWL 156
DY I+ NS C G+ G +E R+ PF W
Sbjct: 51 DYGITPNSKHYNCMIDLLGRAGLLEEAHNLM----------RNMPFE------PDAATWG 94
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA--------LKDLLERMEQEG 208
LL A R+H N EL EK A+M+ +EPNN G YV+L N + L +M Q G
Sbjct: 95 ALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLG 154
Query: 209 ------------------------YVPDTKEVLLDVEE---------------------- 222
+ P+ + +EE
Sbjct: 155 IQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVE 214
Query: 223 -EQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
E+KK +L YH E+LA+ FGI++ P G IRV+KNL + K +SKIV R +I+R
Sbjct: 215 EEEKKRMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHNVIKYISKIVGRLIILR 274
Query: 282 DNRRF 286
D+ RF
Sbjct: 275 DSHRF 279
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 33/204 (16%)
Query: 116 QNGPFDEGLKFFGQMLMA-----KIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVEL 170
Q P D GL +G ML A ++ +I G E V+ LL+ ++ N +
Sbjct: 524 QKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLA--NIYANASM 581
Query: 171 AEKVADMILMIEPN---NTGAYVIL---------------------INEALKDLLERMEQ 206
+ VA + +E N T + I+ I L L+E ++
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641
Query: 207 EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHG 266
GYVPDT + DVE++ K +L H E+LA+ FG+I T GTTI++ KNL +
Sbjct: 642 VGYVPDTDSIH-DVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700
Query: 267 NKVVSKIVHREMIVRDNRRFCRHF 290
K++S + RE+I+RD +RF HF
Sbjct: 701 TKLISLVTGREIIMRDIQRF-HHF 723
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 80/278 (28%)
Query: 92 MAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQMLMAKIKA--------- 137
+A++ F E I+ N IT C G DEG +F M ++
Sbjct: 303 VALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMV 362
Query: 138 ----------RHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
R F M T VW LL ACR+H+N+EL A+ I ++ + G
Sbjct: 363 DLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPG 422
Query: 188 AYVILIN-----------EALKDLLE-------------RMEQEGYV--------PDTKE 215
+V+L N ++ +++ ME E +V P +E
Sbjct: 423 THVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRRE 482
Query: 216 -----------------------VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
VLL +++++++ L YH E+LAL F +++TP G+TIR
Sbjct: 483 IHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIR 542
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KN+ K VSK+V RE+IVRD RF HF
Sbjct: 543 IKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRF-HHF 579
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 86/266 (32%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMH----------AGSTEN- 153
++ + C Q G +EG +F +M + +H R+ H AG ++
Sbjct: 394 VTFTCVLGACSQAGWTEEGRSYFNEM-----QHKHGISPRMEHYACMVTLLGRAGKLDDA 448
Query: 154 --------------VWLTLLSACRVHRNVELAEKVA------------------------ 175
+W +LL +CRVH NV LAE A
Sbjct: 449 YDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASK 508
Query: 176 ----------DMI---------------------LMIEPNNTGAYVILINEALKDLLERM 204
DM+ +++ +++ + I E LK L M
Sbjct: 509 KMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEM 568
Query: 205 EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
+ G+ P T VL DVEE++K +IL H E+LA+ G+IST GT ++VIKNL
Sbjct: 569 RRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCH 628
Query: 265 HGNKVVSKIVHREMIVRDNRRFCRHF 290
K +S RE+ VRD RF HF
Sbjct: 629 EAMKFISSFERREIYVRDTNRF-HHF 653
>gi|53793521|dbj|BAD54682.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 381
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 113/282 (40%), Gaps = 81/282 (28%)
Query: 89 FEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM-----LMAKIKAR 138
F A+ F D+ I +S+T + C G DEG + +M L I+
Sbjct: 90 FSTDALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHY 149
Query: 139 HAPFSRIMHAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILMIEP 183
+ AG E +W LL ACR HRN E+ + VA IL ++P
Sbjct: 150 GCTVDLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDP 209
Query: 184 NNTGAYVILIN--------EALKDLLERMEQ----------------------------- 206
+ GA+V L N + ++++ M+Q
Sbjct: 210 QHAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHP 269
Query: 207 ------------------EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
+G+ P TK V D++EE K+ + H E+LA+ FG+I+T G
Sbjct: 270 QSDQIYAMLDEIGKTLSLKGHKPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRG 329
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR++KNL KVVS++ R ++VRD RF HF
Sbjct: 330 AVIRIVKNLRICEDCHSVMKVVSEVYDRVIVVRDRNRF-HHF 370
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 77/284 (27%)
Query: 80 SRSGSVRKVFEIM-AVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKA- 137
S+ G R+V E+ +RD + +++ ++ +GC G D+G+ F M KI
Sbjct: 304 SKHGERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQ 363
Query: 138 ----RHAPFSRIM-HAGSTENVWL---------------TLLSACRVHRNVELAEKVADM 177
R+ ++ AG E + LL AC VH N+ + E V
Sbjct: 364 PDTKRYGCVVDLLGRAGRVEEAFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGEFVGHR 423
Query: 178 ILMIEPNNT-----------------------------------GAYVILINEALK---- 198
+L EP N G +I +++ L+
Sbjct: 424 LLEFEPENAGNYVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVLQTFHP 483
Query: 199 ----------------DLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
+LL R ++ GY PD VL DV+EEQK+ IL H E+LAL FG+
Sbjct: 484 SDCSHPRREEVSAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLALSFGL 543
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
I+TP+ I VIKNL + K +SKI RE+ +RD F
Sbjct: 544 IATPESVLICVIKNLRICVDCHNFAKYISKIYSREVSLRDKNWF 587
>gi|125553774|gb|EAY99379.1| hypothetical protein OsI_21347 [Oryza sativa Indica Group]
Length = 484
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 35/194 (18%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRV 164
+S N++ GC QNG ++ ++ F +M + +K P S TL+S
Sbjct: 307 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVK----PDS------------FTLVS---- 346
Query: 165 HRNVELAEKVADMILMIEPNNTGAYVILINEA--------LKDLLERMEQEGYVPDTKEV 216
+ +AD+ ++ Y I N L L+E ++ GYVPDT +
Sbjct: 347 -----VIPALADISDPLQARWIHGYSISTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI 401
Query: 217 LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHR 276
DVE++ K +L H E+LA+ FG+I T GTTI++ KNL + K++S + R
Sbjct: 402 H-DVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGR 460
Query: 277 EMIVRDNRRFCRHF 290
E+I+RD +RF HF
Sbjct: 461 EIIMRDIQRF-HHF 473
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 82/190 (43%), Gaps = 55/190 (28%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---------------EALK 198
VW TLL ACR H N+E+ E A ++ +EP + YV+L N A++
Sbjct: 621 VWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMR 680
Query: 199 DL-------LERMEQE---------------------------------GYVPDTKEVLL 218
D L ME E GYVPDT VL
Sbjct: 681 DNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLH 740
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ +E K+ L H E++A+ FG+I+T IR+ KNL K +SK RE+
Sbjct: 741 DMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREI 800
Query: 279 IVRDNRRFCR 288
I+RD+ RF R
Sbjct: 801 ILRDSNRFHR 810
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VPDT EVL ++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R
Sbjct: 581 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 640
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K+VSKI RE+I RD RF HF
Sbjct: 641 KLVSKIYKREIIARDRTRF-HHF 662
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL ACR H N+ELAE A ++ +EP N G+YV+L N
Sbjct: 472 IWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSN 512
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 24/123 (19%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S +++F+ + V+D +S N++ +G + G + E L+ F +M+ ++
Sbjct: 150 SAQEMFDEIPVKD-------VVSWNAMISGYAETGSYKEALELFKEMMKTNVRP------ 196
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDLLER 203
E +T+LSAC R+VEL +V I+ + G+ + ++N AL DL +
Sbjct: 197 -------DEGTMVTVLSACAQSRSVELGRQVHS---WIDDHGFGSNLKIVN-ALIDLYSK 245
Query: 204 MEQ 206
Q
Sbjct: 246 CGQ 248
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G++G E L+F +M M +W L ACR H+ ++A+
Sbjct: 495 GRSGQLKEALRFIERMPM----------------NPDFVIWGALFCACRAHKKTKMAKFA 538
Query: 175 ADMILMIEPNNTG-------AYVIL----------------------------------- 192
+ +L +EP +TG AY L
Sbjct: 539 LNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHR 598
Query: 193 -------------INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
I L++++ ++GY+P T+ VL ++E+E+K+++L HGE+LAL
Sbjct: 599 FVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALA 658
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
F +I T G TIR++KNL K SKI RE+++RD +RF HF
Sbjct: 659 FALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRF-HHF 708
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL+D++ R+ + GY P+T VL D+ EE+K+ L YH E+LA+ FG+I+TP G T+R
Sbjct: 480 IYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLR 539
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL K++SK R +++RD RF R
Sbjct: 540 VIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHR 575
>gi|190612769|gb|ACE80762.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L LL M++ GYVPDT VL DV+EE+K+ L H E+LA+ FG++STP GT +R
Sbjct: 52 IRAKLALLLGCMKEAGYVPDTSFVLHDVDEEKKEFHLCGHSEKLAIAFGLMSTPSGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K ++KIV R++IVRD RF HF
Sbjct: 112 ILKNLRVCGDCHTATKFIAKIVGRKIIVRDVNRF-HHF 148
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I + L ++ ER+ +GYVP T VL D+EEE+K+ L YH ERLA+ F ++ + G+ IR
Sbjct: 489 IYQTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIR 548
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL K++SK+ RE+IVRD RF HF
Sbjct: 549 IVKNLRMCGDCHLVIKLISKVYDREIIVRDRSRF-HHF 585
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN------ 153
I+ + C G D+G ++F +M + I+ + AG E
Sbjct: 326 ITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYIT 385
Query: 154 ---------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
VW TLL AC +H+ +EL E ++ ++P ++G YV+L N
Sbjct: 386 TMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSN 435
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL+D++ R+ + GY P+T VL D+ EE+K+ L YH E+LA+ FG+I+TP G T+R
Sbjct: 482 IYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLR 541
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL K++SK R +++RD RF R
Sbjct: 542 VIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHR 577
>gi|383157276|gb|AFG60961.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157278|gb|AFG60962.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157280|gb|AFG60963.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M++ GYVP T VL D EEE K+ +L+ H E+LA+ FG+I+T G IR
Sbjct: 42 IYAMLETLYGQMKEAGYVPKTNPVLQDAEEEMKETVLFSHSEKLAIAFGVINTSPGNPIR 101
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL + K +SKIV R +IVRD RF HF
Sbjct: 102 IVKNLHMCTDCHNAIKFISKIVGRVIIVRDANRF-HHF 138
>gi|358357180|gb|AEU08430.1| pentatricopeptide repeat protein [Lejeunea cavifolia]
Length = 152
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 200 LLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPS 259
L E+M+Q GY+PDT+ L D EE +K + L YH E+LA+ FG+ISTP G + ++KNL +
Sbjct: 59 LAEQMKQAGYIPDTRFALRDEEEGKKIDHLCYHSEKLAIAFGLISTPAGAPLHIVKNLRA 118
Query: 260 LRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
K ++K+V RE+ VRD RF HF
Sbjct: 119 CGDCHTATKFIAKLVGREITVRDANRF-HHF 148
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI L+ L ++ GYVPD VLLDV++++K+ L+ H ERLAL +G+I TP +I
Sbjct: 703 LICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSI 762
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+IKNL K++SK+V RE+++RD RF HF
Sbjct: 763 RIIKNLRICIDCHTVMKLISKVVQREIVIRDINRF-HHF 800
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEA----------------- 196
VW TLLSACR+H+++E A+ ++ ++ +E + G+YV+L N
Sbjct: 484 VWKTLLSACRLHKHMEYAKLASENLIQLEECDAGSYVMLSNVYATHSKWLDTSKLRSSMR 543
Query: 197 --------------LKDLLERM-----------EQEGYVPDTKEVLLD------------ 219
LK+++ E Y+ E L D
Sbjct: 544 ERRVWKQPGRSWIHLKNIMHTFVAGDTAHPRSAEIYAYLEKLMERLKDLGYTSRTDLVAH 603
Query: 220 -VEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
VEEEQ++ L +H E+LA+ FGIISTP GT +R+ KNL K VS+ RE+
Sbjct: 604 DVEEEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCVDCHEAIKYVSQATDREI 663
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 664 VVRDLYRF-HHF 674
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 101/256 (39%), Gaps = 76/256 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHAG 149
+ A C G +EGL +F M + I R R M
Sbjct: 654 VLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVS 713
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG-------AYVIL---------- 192
+ VW TLLSACRVH+N+E+ E A +L +EP+++ AY +
Sbjct: 714 ANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVR 773
Query: 193 --------------------------------------INEALKDLLERMEQEGYVPDTK 214
I + L DL +R+ + GY+
Sbjct: 774 KMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNY 833
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
+ + E+EQK + H E+LA+ FG++S P +RVIKNL K S+++
Sbjct: 834 FLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVM 893
Query: 275 HREMIVRDNRRFCRHF 290
RE+++RD RF HF
Sbjct: 894 GREIVLRDVYRF-HHF 908
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 68/216 (31%)
Query: 142 FSRIMHAGSTENV------------WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY 189
+R H G E+V W LL+ACR H NVE+ E+ A+ L +EP N G Y
Sbjct: 595 LARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTY 654
Query: 190 VIL------------INEALKDLLER----------MEQEGYV----------PDTKE-- 215
V L + + K + ER +E G V P T+E
Sbjct: 655 VSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIY 714
Query: 216 ---------------------VLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVI 254
V+ D+++E K+ + +H E+LA+ +G+ISTP T IRV
Sbjct: 715 SELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVS 774
Query: 255 KNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
KNL K +SKI RE+I RD RF HF
Sbjct: 775 KNLRVCTDCHTATKFISKITGREIIARDAHRF-HHF 809
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 168 VELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKN 227
V+L +KV+ + + T + I L+D+ + +++ GYV DT + L D +EEQK++
Sbjct: 898 VKLKDKVSSFGI---GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEH 954
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
L+ H ERLAL + ++STP+G+T+R+ KNL K VS+++ R +++RD RF
Sbjct: 955 NLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRF- 1013
Query: 288 RHF 290
HF
Sbjct: 1014 HHF 1016
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 168 VELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKN 227
V+L +KV+ + + T + I L+D+ + +++ GYV DT + L D +EEQK++
Sbjct: 808 VKLKDKVSSFGI---GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEH 864
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
L+ H ERLAL + ++STP+G+T+R+ KNL K VS+++ R +++RD RF
Sbjct: 865 NLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRF- 923
Query: 288 RHF 290
HF
Sbjct: 924 HHF 926
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I +AL+DLL+R++ GY P+ V D+ +E+KK +L H E+LAL FG+++T G TIR
Sbjct: 540 IKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIR 599
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL S+I RE++VRDN RF HF
Sbjct: 600 IVKNLRICEDCHSVMCGASQITGREIVVRDNMRF-HHF 636
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM-LMAKIKA-------------------RHAPFS 143
+++ +I C + DEG +F +M L+ I+
Sbjct: 471 SVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLV 530
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------E 195
R M +W ++LSACRVH++ LA A+ +L +EP+ YV L N E
Sbjct: 531 RTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWE 590
Query: 196 ALKDLLERMEQEG----------------------------------------------- 208
+ ME+ G
Sbjct: 591 DASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVG 650
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y P T ++ +DV+EE+K++ L H E++A+ FG+IS + +IKNL K
Sbjct: 651 YSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIK 710
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++S+I +RE+IVRD RF HF
Sbjct: 711 LISRIWNREIIVRDRSRF-HHF 731
>gi|297735091|emb|CBI17453.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I +AL+DLL+R++ GY P+ V D+ +E+KK +L H E+LAL FG+++T G TIR
Sbjct: 322 IKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIR 381
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
++KNL S+I RE++VRDN RF HF
Sbjct: 382 IVKNLRICEDCHSVMCGASQITGREIVVRDNMRF-HHF 418
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL+D++ R+ + GY P+T VL D+ EE+K+ L YH E+LA+ FG+I+TP G T+R
Sbjct: 473 IYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLR 532
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL K++SK R +++RD RF R
Sbjct: 533 VIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHR 568
>gi|190612691|gb|ACE80723.1| pentatricopeptide repeat protein [Bazzania trilobata]
Length = 152
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L E+++ EGY+PDT+ VL +++EE KK L H E+LA+ +G++ TP G IR
Sbjct: 52 IYSELNKLTEKLKAEGYIPDTQLVLQNIDEEDKKVALCSHSEKLAIAYGLMCTPRGQPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+ RE+I RD+ RF HF
Sbjct: 112 VYKNLRVCSDCHTATKFISKVTGREIIARDSNRF-HHF 148
>gi|49533766|gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
Length = 741
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 45/178 (25%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPN------------------------NTGAY 189
VW T+++ CR+H N+EL ++ A+++ +++P+ A
Sbjct: 550 VWETMMNLCRIHGNLELGDRCAEIVELLDPSRLDEQSKAGFLAVKASDIAKEKEKKRSAQ 609
Query: 190 VIL---------------------INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNI 228
+L I L+ L + M+++GY+P+TK VL DV++E K++
Sbjct: 610 SLLEARSKVHEYRAGDRSHPDHEKIYALLRGLKQLMKEDGYIPETKFVLHDVDQETKEDA 669
Query: 229 LYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
L H ERLA G++++ + IR+IKNL + K+ SK+V RE+I+RD +RF
Sbjct: 670 LMAHSERLAFAQGLMNSSARSPIRIIKNLRVCGDCHNALKIASKLVGREIIMRDAKRF 727
>gi|326524400|dbj|BAK00583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 60/225 (26%)
Query: 109 SITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNV 168
SI GQ+G DE +F +M + ++W +L++ CR++ +
Sbjct: 245 SIVNMLGQSGYVDEAREFIERMPTEP----------------SVDIWESLMNMCRLNGYL 288
Query: 169 ELAEKVADMILMIEPN------NTGAY--------------------------------- 189
EL ++ A +I ++P+ TG +
Sbjct: 289 ELGDRCAQIIERLDPSRLNEQSKTGLFPVNASDLAKEKERKKANTAEARSKVHEYRAGDR 348
Query: 190 ----VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIIST 245
+ I E L+ L M++ GY+ DT+ VL DV+ E K++ L H ERLA+ +G+I++
Sbjct: 349 SHPETLKIYEELRYLAAHMKEAGYIADTRFVLHDVDPETKEDALLAHSERLAVSYGLITS 408
Query: 246 PDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ IRVIKNL S K++SK+V R++I RD +RF HF
Sbjct: 409 AARSPIRVIKNLRSCGDCHTALKIISKLVGRQIIARDAKRF-HHF 452
>gi|297836184|ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
gi|297331814|gb|EFH62233.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
Length = 548
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 33/189 (17%)
Query: 128 GQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVEL-------------AEKV 174
G ++ A+ R PF T + W + + R+H +++L ++ V
Sbjct: 356 GHLIEAEQYIRDLPFE------PTADFWEAMRNYARLHGDIDLEDYMEELMVDLDSSKAV 409
Query: 175 ADMILMIEPNNTGAYVILINEA----------LKDLLERMEQEG---YVPDTKEVLLDVE 221
+ I +P + ++ +++ KD + M + YVPDT+ VL D++
Sbjct: 410 TNKIPTPQPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVLHDID 469
Query: 222 EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVR 281
+E K+ L YH ERLA+ +GII TP T+ +IKNL + K++SKI+ RE+IVR
Sbjct: 470 QEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRELIVR 529
Query: 282 DNRRFCRHF 290
DN+RF HF
Sbjct: 530 DNKRF-HHF 537
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 168 VELAEKVADMILMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKN 227
V+L +KV+ + + T + I L+D+ + +++ GYV DT + L D +EEQK++
Sbjct: 791 VKLKDKVSSFGI---GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEH 847
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
L+ H ERLAL + ++STP+G+T+R+ KNL K VS+++ R +++RD RF
Sbjct: 848 NLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRF- 906
Query: 288 RHF 290
HF
Sbjct: 907 HHF 909
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VPDT EVL ++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R
Sbjct: 618 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 677
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K++SKI RE+I RD RF HF
Sbjct: 678 KLISKIYKREIIARDRTRF-HHF 699
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL AC+++ NVEL E A ++ IEP N G+YV+L N
Sbjct: 509 IWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSN 549
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ + +++QEGY PDT L +V EEQK+ +L H ERLAL FG+I+TP G +
Sbjct: 771 IYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLH 830
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K+VSKI RE+++RD RF HF
Sbjct: 831 IFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRF-HHF 867
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 24/108 (22%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMH------- 147
S+ GC G +EG ++F M M + +R M
Sbjct: 612 SVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSF 671
Query: 148 -AGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
AG VW TLL AC+VH+NVEL + A+ +L +EP ++ YV+L N
Sbjct: 672 PAGPM--VWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSN 717
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 106/254 (41%), Gaps = 76/254 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRI------MHA 148
S+ C G ++G ++F +M M + R + M
Sbjct: 376 SLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPI 435
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG-------AYVI---------- 191
T +W TLL AC +H +V+LAE+V + + ++PNN+ AY +
Sbjct: 436 PCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASV 495
Query: 192 -----------------------------------LINEA---LKDLLERMEQEG-YVPD 212
+ EA LK+++ R+ EG YVP+
Sbjct: 496 RRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPE 555
Query: 213 TKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSK 272
VL D+EEE+K+ + H E+LA+ FGI G TIR++KNL R K++S+
Sbjct: 556 IGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQ 615
Query: 273 IVHREMIVRDNRRF 286
I E++VRD RF
Sbjct: 616 IYKVEIVVRDRSRF 629
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 100/251 (39%), Gaps = 71/251 (28%)
Query: 109 SITAGCGQNGPFDEGLKFF-GQMLMAKIKARHAPFSRIMHAGSTEN-------------- 153
++ GC G DEGL+ F G + +K + AG
Sbjct: 318 AVLCGCNHAGLVDEGLRVFHGMRVPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFPADI 377
Query: 154 -VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
+W TLL A + H +VELAE A + + N G YV+L N
Sbjct: 378 VLWQTLLGASKTHGDVELAEVAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVRDTM 437
Query: 195 ----------------------------------EALKDLLERMEQEG---YVPDTKEVL 217
E + L E M + G Y P+T VL
Sbjct: 438 RSNDVRKVPGFSYTEISGVMHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNVL 497
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
D+ EE+K+ L YH E+LA+ FG+I+TP G T+RVIKN+ K++SK R
Sbjct: 498 HDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKAYGRA 557
Query: 278 MIVRDNRRFCR 288
+I+RD RF R
Sbjct: 558 IIIRDRARFHR 568
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 76/263 (28%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
AI+ ++ +GC +G +G K+F M M + + F
Sbjct: 640 AITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFI 699
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
M + ++W +L+ACR+H+++++AE A + +EP N+ YV+++N
Sbjct: 700 HAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWG 759
Query: 195 --EALKD--------------------------------------------LLERMEQEG 208
E LK+ L+ +++ G
Sbjct: 760 DVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLG 819
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPDT V ++++ +K+ +L H E+LA+ +G++ GT IRV+KN + K
Sbjct: 820 YVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAK 879
Query: 269 VVSKIVHREMIVRDNRRFCRHFL 291
+S +RE+ +RD RF HF+
Sbjct: 880 YISLARNREIFLRDGGRF-HHFM 901
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VPDT EVL ++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R
Sbjct: 603 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 662
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K++SKI RE+I RD RF HF
Sbjct: 663 KLISKIYKREIIARDRTRF-HHF 684
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL AC++H NVEL E A ++ IEP N G+YV+L N
Sbjct: 494 IWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSN 534
>gi|367064005|gb|AEX12049.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064011|gb|AEX12052.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064019|gb|AEX12056.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064021|gb|AEX12057.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064023|gb|AEX12058.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064037|gb|AEX12065.1| hypothetical protein 0_18789_01 [Pinus radiata]
Length = 161
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 73/159 (45%), Gaps = 55/159 (34%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW LL+ACR H NV+L E+VA + ++ N YV+L N
Sbjct: 1 VWGCLLAACRTHTNVDLGERVAKSLFELDSKNASYYVLLSNLYAACSRWDDVKRVRKIMK 60
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
E + D+LE+ M GYVP+ L
Sbjct: 61 DQGIQKMPGSSWIEVNGKVYAFLVGDKSHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALH 120
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
DVEEEQK+NIL +H E+LA+ FG+++T GTTIR+ KNL
Sbjct: 121 DVEEEQKENILGHHSEKLAIAFGLMNTSCGTTIRITKNL 159
>gi|383135483|gb|AFG48752.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+EGYVPDT VL DV EEQK + L+ H E+LA+ FGII+TP T IRV+KNL
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTPIRVLKNLRVCVDCHS 60
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I+RD +RF HF
Sbjct: 61 VIKFISKVYEREIILRDTKRF-HHF 84
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 107/265 (40%), Gaps = 76/265 (28%)
Query: 101 CDYAISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHA------ 140
C I+ S+ + C G ++G K+F M+ M I R
Sbjct: 347 CPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAK 406
Query: 141 PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-EALKD 199
F M +T ++W +LL++CR++RN+ELAE A + IEP+N G +V+L N A D
Sbjct: 407 DFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAAND 466
Query: 200 LLER-------------------------------MEQEGYVPDTKEVLLDVE------- 221
E M E P E+ L +E
Sbjct: 467 RWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMK 526
Query: 222 ----------------EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
E +K+ +L +H E+LAL FGI+ P G IR++KNL
Sbjct: 527 KIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHS 586
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+ S I RE+IVRD RF HF
Sbjct: 587 FMKLASSITEREIIVRDTNRF-HHF 610
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VPDT EVL ++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R
Sbjct: 618 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 677
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K++SKI RE+I RD RF HF
Sbjct: 678 KLISKIYKREIIARDRTRF-HHF 699
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN----------- 153
+ + C +G D G F M LM K++ H+G +
Sbjct: 445 LLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEME 504
Query: 154 ----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL AC++H NVEL E A ++ IEP N G+YV+L N
Sbjct: 505 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSN 549
>gi|242076142|ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
gi|241939190|gb|EES12335.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
Length = 458
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 109/231 (47%), Gaps = 38/231 (16%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKAR----- 138
S +VFE +L+ S NS+ +GC QNG E L F M A + +
Sbjct: 231 SALRVFE------WLQDARDVASWNSVISGCVQNGRTLEALALFRVMQSAGVANKLLELE 284
Query: 139 -HAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEP--------NNTGAY 189
P + I+ NV+ + V E+ ++A+ L P NN +
Sbjct: 285 PDKPGNYIL----VSNVFAEMGKWNNVK---EIRTRMAEQGLRKSPACSWIEIGNNIHTF 337
Query: 190 VI---------LINEALKDLLERMEQEG-YVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
I+ L ++ E++ +EG YV DT+ VL DV EE+K ++L+ H ERLA+
Sbjct: 338 TSRDYCHRDSEAIHLKLSEITEKLRKEGGYVEDTRFVLHDVSEEEKIDMLHKHSERLAIA 397
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG+IST G IR+ KNL K+VSK+ RE++VRD RF HF
Sbjct: 398 FGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFGREIVVRDANRF-HHF 447
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN----EALKDLLERM----- 204
+W LLSACR+++NVELA+ A+ + ++ N+G YV+L N + +ERM
Sbjct: 467 LWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVK 526
Query: 205 ----------------------------------------------EQEGYVPDTKEVLL 218
GYVP+T VL
Sbjct: 527 TRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLH 586
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++ E+++++L H E+LA+ F ++++ G+ I VIKNL K+++K+ RE+
Sbjct: 587 DLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREI 646
Query: 279 IVRDNRRFCRHF 290
I+RD +RF HF
Sbjct: 647 IIRDLKRF-HHF 657
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 104/262 (39%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
+I+ S+ + C G D+G +F M M + R F
Sbjct: 407 SIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFI 466
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
+ M E VW LLSACRVH +++ AD++ + P +G YV+L N
Sbjct: 467 KQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWK 526
Query: 195 ------EALKDL-------LERMEQEG----------YVPDTKEV--------------- 216
A+K + + +E G Y P K +
Sbjct: 527 DVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELG 586
Query: 217 --------LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
L DVE E K+ L H E+LA+VF I++T GT IR+ KNL K
Sbjct: 587 YIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIK 646
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKIV R +IVRD RF HF
Sbjct: 647 LISKIVSRNIIVRDCNRF-HHF 667
>gi|358357204|gb|AEU08442.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 151
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
LK L + M++ GY+PDT+ L + +EEQK++ L +H E+LA+ FG+I TP GT IRVIKN
Sbjct: 56 LKRLTQWMKETGYIPDTRFALHE-QEEQKQSSLCHHSEKLAIAFGLICTPPGTLIRVIKN 114
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K +SKIV R +++RD RF HF
Sbjct: 115 LRVCGDCHTATKFISKIVERTIVLRDANRF-HHF 147
>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 77/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
AI+ ++ +GC +G +EG K F M MA + R F
Sbjct: 228 AITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGYLDEAWDFI 287
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
+ M +VW +L +CR+H N+E AE A + +EP N+ YV++++
Sbjct: 288 QTMPIKPDASVWGAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLMLSLYAMSNRWE 347
Query: 195 --EALKDLLE--------------------------------------------RMEQEG 208
+ +KDL++ +++ G
Sbjct: 348 DVDRIKDLMDTRGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELYQLVSELKKFG 407
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y+PD V +++EE+K +L H E+LA+ +G+I T IRVIKN K
Sbjct: 408 YLPDVNCVYQNIDEEEKVKMLLSHTEKLAITYGLIKTSSA-PIRVIKNTRICSDCHTAAK 466
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++S + RE+ +RD RF HF
Sbjct: 467 LISLVRSREIFLRDGVRF-HHF 487
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 208 GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGN 267
G+VPDT EVL ++EEE K+ L +H E+LA+ FG+IST GT + ++KNL R
Sbjct: 618 GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 677
Query: 268 KVVSKIVHREMIVRDNRRFCRHF 290
K++SKI RE+I RD RF HF
Sbjct: 678 KLISKIYKREIIARDRTRF-HHF 699
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W +LL AC++H NVEL E A ++ IEP N+G+YV+L N
Sbjct: 509 IWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSN 549
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S +K+F+ + V+D +S N++ +G + G + E L+ F +M+ +K
Sbjct: 187 SAQKMFDEIPVKD-------VVSWNALISGYAETGNYKEALELFKEMMKTNVKP------ 233
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEALKDL 200
E+ +T+LSAC ++EL +V I+ + G+ + ++N AL DL
Sbjct: 234 -------DESTMVTVLSACAQSASIELGRQVHS---WIDDHGFGSNLKIVN-ALIDL 279
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 109/262 (41%), Gaps = 81/262 (30%)
Query: 84 SVRKVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLMAKIKARHAPFS 143
S++K+F I R+ N + G+ G DE ++F
Sbjct: 404 SMKKLFGIQPERE---------HHNCMVDLLGRAGKLDEAVEFI---------------- 438
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
R M+ +W TLL ACR+H++ LA A IL +EP++ GA V+L N
Sbjct: 439 RDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWT 498
Query: 195 ------EALKD----------------------------------------LLERMEQEG 208
+A++D L+ R+ G
Sbjct: 499 DAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALG 558
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVP T+ VL D+ EQK+++L YH E++A+ FG + G IR++KNL K
Sbjct: 559 YVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAK 618
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+VSK R +I+RD RF HF
Sbjct: 619 LVSKSEGRMIIIRDPVRF-HHF 639
>gi|190612663|gb|ACE80709.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L +ME+ GYVPDT V DVEEE+K L +H E+LA+ +G+ISTP GT +RV KN
Sbjct: 56 LRRLYGQMEEAGYVPDTHFVFHDVEEEEKIVQLCHHSEKLAIAYGLISTPPGTPLRVFKN 115
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K++++IV RE+ VRD RF HF
Sbjct: 116 LRVCGDCHTAIKLIAQIVEREITVRDATRF-HHF 148
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 104/262 (39%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA------PFS 143
+I+ S+ + C G D+G +F M M + R F
Sbjct: 407 SIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFI 466
Query: 144 RIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------- 194
+ M E VW LLSACRVH +++ AD++ + P +G YV+L N
Sbjct: 467 KQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWK 526
Query: 195 ------EALKDL-------LERMEQEG----------YVPDTKEV--------------- 216
A+K + + +E G Y P K +
Sbjct: 527 DVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELG 586
Query: 217 --------LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
L DVE E K+ L H E+LA+VF I++T GT IR+ KNL K
Sbjct: 587 YIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIK 646
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
++SKIV R +IVRD RF HF
Sbjct: 647 LISKIVSRNIIVRDCNRF-HHF 667
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 107/265 (40%), Gaps = 76/265 (28%)
Query: 101 CDYAISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHA------ 140
C I+ S+ + C G ++G K+F M+ M I R
Sbjct: 320 CPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAK 379
Query: 141 PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-EALKD 199
F M +T ++W +LL++CR++RN+ELAE A + IEP+N G +V+L N A D
Sbjct: 380 DFIDRMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAAND 439
Query: 200 LLER-------------------------------MEQEGYVPDTKEVLLDVE------- 221
E M E P E+ L +E
Sbjct: 440 RWEEVARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMK 499
Query: 222 ----------------EEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
E +K+ +L +H E+LAL FGI+ P G IR++KNL
Sbjct: 500 KIGYKAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHS 559
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K+ S I RE+IVRD RF HF
Sbjct: 560 FMKLASSITEREIIVRDTNRF-HHF 583
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E LK L ME+ GY PDT+ VL ++++E ++ L H ERLA+ +G++ TP GT IR
Sbjct: 1054 IYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIR 1113
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
+ KNL +K +SK+V RE+I RD+ RF
Sbjct: 1114 IFKNLRICGDCHTASKFISKLVGREIIARDSNRF 1147
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M +EGYVPD VL DVE+ +K +L +H E+LA+ FG++ PDG IR
Sbjct: 636 IYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIR 695
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V+KNL + K +S+I RE++VRD RF
Sbjct: 696 VVKNLRVCGDCHNATKYISRITQREILVRDAVRF 729
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 155 WLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL 192
W TLLS+CR++ N+E+ + A+ + +EP N +Y++L
Sbjct: 543 WATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILL 580
>gi|147804919|emb|CAN78051.1| hypothetical protein VITISV_015864 [Vitis vinifera]
Length = 231
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 197 LKDLLERMEQEGYVPDTKEVL-LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIK 255
L +L RM++ GYV ++ ++ +DVEEE K+ I+ H ERLAL FG+IS P G TIRV+K
Sbjct: 127 LXELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTIRVMK 186
Query: 256 NLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
NL R K++S+IV R+ +VRD RF HF
Sbjct: 187 NLRMCRDCHEAFKLISEIVERDFVVRDVNRF-HHF 220
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 192 LINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
LI+E L L ERM+ GYVPD L DV+E K +L H E+LA+ FG++ST G T+
Sbjct: 509 LIHERLCQLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITL 568
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
R+ KNL K++SKI RE+I+RD RF HF
Sbjct: 569 RIFKNLRVCGDCHTAAKLISKIEDREIILRDTTRF-HHF 606
>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
Length = 704
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 55/188 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
W +LL +C+ H +V+L + A+ +L + ++G YV+L N
Sbjct: 503 AWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMK 562
Query: 195 ---------------------------------EALKDLLERME---QEGYVPDTKEVLL 218
E L +L E + GY PDTK VL
Sbjct: 563 ARGVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLH 622
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
V +E+K+ +L YH E+LA+ F I+ GT IR++KNL K +SK++ RE+
Sbjct: 623 SVLDEEKEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREI 682
Query: 279 IVRDNRRF 286
IVRD RF
Sbjct: 683 IVRDGYRF 690
>gi|190612899|gb|ACE80827.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+ L +ME+ GYVPDT V DVEEE+K L +H E+LA+ +G+ISTP GT +RV KN
Sbjct: 56 LRRLYGQMEEAGYVPDTHFVFHDVEEEEKIVQLCHHSEKLAIAYGLISTPPGTPLRVFKN 115
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L K++++IV RE+ VRD RF HF
Sbjct: 116 LRVCGDCHTAIKLIAQIVEREITVRDATRF-HHF 148
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL ++ R+ GY P+T VL D+ EE+K+ L YH E+LA+ FG+ISTP G TIR
Sbjct: 489 IYRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIR 548
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL + K++SK +R +I+RD RF R
Sbjct: 549 VIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARFHR 584
>gi|361066295|gb|AEW07459.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 206 QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
+EGYVPDT VL DV +EQK + L+ H E+LA+ FGII+TP T IRV+KNL
Sbjct: 1 EEGYVPDTNFVLHDVGQEQKAHALHCHSEKLAVAFGIINTPPRTPIRVLKNLRVCGDCHS 60
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K +SK+ RE+I+RD +RF HF
Sbjct: 61 VIKFISKVYEREIILRDTKRF-HHF 84
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 179 LMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLAL 238
L + P + G I+ +K L E ++ GYVPDT V+ DVEE +K+ +L+ H ER+A+
Sbjct: 623 LHLHPEHKG-----IDSEMKRLEELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAI 677
Query: 239 VFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG++ T +RV+ NL K++SK V RE++VRD RRF HF
Sbjct: 678 AFGLMRGGSDTIVRVVNNLRICSDCHAAVKLISKTVGREILVRDTRRF-HHF 728
>gi|190612773|gb|ACE80764.1| pentatricopeptide repeat protein [Porella platyphylla]
gi|358357142|gb|AEU08411.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 153
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 197 LKDLLERME--------QEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
L D+LE +E + GY PDT+ VL DV+EE+KK L +H E+LA+ FG+ISTP G
Sbjct: 49 LADILEELERLFGHGLMEAGYEPDTRFVLHDVDEEEKKVHLGHHSEKLAIAFGLISTPPG 108
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
T +R+ KNL K ++KIV RE+IVRD F HF
Sbjct: 109 TPLRIFKNLRVCGDCHTATKFIAKIVGREIIVRDANSF-HHF 149
>gi|358357236|gb|AEU08458.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L L +M++ G +PDT+ VL DVEEE KK L YH E+LA+ FG+I TP GT +R
Sbjct: 52 IHVELNRLSGQMKEAGSMPDTRFVLHDVEEEMKKFSLCYHSEKLAIAFGLIKTPPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+IKNL K +SKIV R ++VRD F HF
Sbjct: 112 IIKNLRVCGDCHTATKFISKIVGRAIVVRDGNCF-HHF 148
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 75/254 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHAG 149
+++ ++ C + +EG + F +M M + AR MH
Sbjct: 469 SVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLV 528
Query: 150 STEN------VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEAL------ 197
T +W ++LSACRVH+N++LA A+ +L + P YV L N +
Sbjct: 529 QTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWV 588
Query: 198 --KDLLERMEQEG----------------------------------------------- 208
K + ME++G
Sbjct: 589 EAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAG 648
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
Y P T + +DV+EE+K+ L H E++A+ FG+IS P I ++KNL K
Sbjct: 649 YSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIK 708
Query: 269 VVSKIVHREMIVRD 282
++S++ +RE+IVRD
Sbjct: 709 LISQLWNREIIVRD 722
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE L+ M M + +W +LLSA +VH N++ E
Sbjct: 381 GRAGKIDEALELIKSMPME----------------PNDVLWRSLLSASKVHNNLQAGEIA 424
Query: 175 ADMILMIEPNNTGAYVILIN---------------------------------------- 194
A + ++ YV+L N
Sbjct: 425 AKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHR 484
Query: 195 -----------EALKDLLERMEQ----EGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
E++ ++L +ME EGY PDT +VL DV+EE+KK L H ++LA+
Sbjct: 485 FVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIA 544
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ +I T G+ IR+++NL K++S I RE+ VRD RF HF
Sbjct: 545 YALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRF-HHF 594
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 77/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRIMH--A 148
S+ + C +G + GLK F M L+ + + + IM
Sbjct: 544 SVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603
Query: 149 GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-------------- 194
NV+ +L AC++H+NV AEK A+ + + P++ G +V+L N
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663
Query: 195 -------------------------------------EALKDLLERM----EQEGYVPDT 213
+ + LE++ ++ GYVPDT
Sbjct: 664 RVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT 723
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
++L VE + K+ +L H E+LA+ FG+++T GTTI V KNL + K +S +
Sbjct: 724 N-LVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLV 782
Query: 274 VHREMIVRDNRRFCRHF 290
RE++VRD +RF HF
Sbjct: 783 TGREIVVRDMQRF-HHF 798
>gi|358357232|gb|AEU08456.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ LK L +M++ GYVPDT+ VL DVE+EQK L +H E+LA+ FG+IST G+ +R
Sbjct: 52 IHAELKRLSWQMKEAGYVPDTRFVLHDVEKEQKDISLCHHSEKLAIAFGLISTSPGSPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
VIKNL K +SKI R + VRD RF HF
Sbjct: 112 VIKNLRVCGDCHTAIKFISKISGRAIAVRDANRF-HHF 148
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 78/280 (27%)
Query: 87 KVFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQML-----MAKIKARHAP 141
K+F MA + +E + A ++ C +G D+GL+ F M+ +K
Sbjct: 279 KLFNSMAEQTEMEVNEVAFL--NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336
Query: 142 FSRIMHAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILMIEPNNT 186
+ AG + +W TLLSAC +H+N E+A+KV IL I+PN++
Sbjct: 337 VDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDS 396
Query: 187 GAYVILIN------------EALKDLLER----------MEQEGYV----------PDTK 214
YV+L N E K + ++ E +G V +K
Sbjct: 397 ACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSK 456
Query: 215 EV-----------------------LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTI 251
E+ L D++EE+K++ L H E+LA+ F ++ P+G I
Sbjct: 457 EIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPI 516
Query: 252 RVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
R+IKNL K +S I++RE+ +RD RF HF+
Sbjct: 517 RIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRF-HHFI 555
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 77/256 (30%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARH------APFSRIMHAG 149
+ + C +G +EG ++FG M M + R F + M
Sbjct: 585 VLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIE 644
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY-------------------- 189
+V+ +L ACR+H+NVEL EK A+ I ++P++ G +
Sbjct: 645 PAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVR 704
Query: 190 ----------------VILINEA-------------------LKDLLERMEQEGYVPDTK 214
V L NE L+ L R++ GY+PDT
Sbjct: 705 TTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTN 764
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
V DVE+ K+ +L H E+LA+ F +++T GTTI + KNL + K +S +
Sbjct: 765 SVH-DVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVT 823
Query: 275 HREMIVRDNRRFCRHF 290
RE+IVRD RRF HF
Sbjct: 824 KREIIVRDMRRF-HHF 838
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 57/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL--------------------- 192
VW LL+ CR+HRN+EL E A ++L +EPN+ G +V+L
Sbjct: 668 VWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMR 727
Query: 193 ------------------INEALKD----------------LLERMEQEGYVPDTKEVLL 218
I+ L D + ERM+ G+ P + L
Sbjct: 728 VKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAP-VESYSL 786
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
+ +E K ++L H ERLA+ FG+I+T GT+I V KN + +++SKIV RE+
Sbjct: 787 EDKEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREI 846
Query: 279 IVRDNRRFCRHF 290
VRD + F HF
Sbjct: 847 TVRDTKEF-HHF 857
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I LK++ R+ GYVPD VLLDV E++K+ +L H E+LA+ F +IST G IR
Sbjct: 738 IEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIR 797
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHFL 291
V KNL K+VSK RE+IVRDN RF HF
Sbjct: 798 VAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRF--HFF 834
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 21/97 (21%)
Query: 103 YAISRNSITAGC-----GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLT 157
Y I+ ++ GC G+ G E L M M + +W +
Sbjct: 604 YGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEP----------------NDVIWGS 647
Query: 158 LLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
LL+ACRVH+NV++A A+ I ++P TG +V+L N
Sbjct: 648 LLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSN 684
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 111/276 (40%), Gaps = 76/276 (27%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLM--------------- 132
+FE MA R +Y ++ S+ + C + G + G+K F M
Sbjct: 398 LFEEMAPRGCGPTPNY-MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIV 456
Query: 133 -----AKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
A + R F + M T +VW L +ACR+H +L A+ + ++P ++G
Sbjct: 457 DMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG 516
Query: 188 AYVIL---------------------------------------------------INEA 196
+V+L +N+
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 576
Query: 197 LKDLLERMEQE----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
++ L ++ E GY PD K L D+EEE+K + +H E+LAL FG++S P IR
Sbjct: 577 IQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIR 636
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K VS V RE+IVRDN RF R
Sbjct: 637 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHR 672
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL ++ R+ GY P+T VL D+ EE+K+ L YH E+LA+ FG+ISTP G TIR
Sbjct: 523 IYRALDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIR 582
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
VIKNL + K++SK +R +I+RD RF R
Sbjct: 583 VIKNLRTCGDCHVVAKLISKAYNRVIIIRDRARFHR 618
>gi|190612891|gb|ACE80823.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I+ L+ L +ME+ GYVPDT+ VL DVEEE+K L +H E+LA+ FG+IST GT +R
Sbjct: 52 IHAELQRLSCQMEKAGYVPDTRFVLHDVEEEEKVLRLCHHSEKLAIAFGLISTAPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKI RE++VRD RF HF
Sbjct: 112 IYKNLRVCVDCHTATKFMSKIEGREILVRDANRF-HHF 148
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W TLL AC H +ELAEKV + I ++ + G YV+L N
Sbjct: 357 IWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMR 416
Query: 195 --------------------------------EALKDLL----ERMEQEGYVPDTKEVLL 218
E++++ L + ++ GY PD VL
Sbjct: 417 EKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLF 476
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K++ L YH E+LA+ F ++ D TIRV+KNL K S + RE+
Sbjct: 477 DIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREI 536
Query: 279 IVRDNRRFCRHF 290
I+RD RF HF
Sbjct: 537 IIRDRNRF-HHF 547
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W TLL AC H +ELAEKV + I ++ + G YV+L N
Sbjct: 357 IWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMR 416
Query: 195 --------------------------------EALKDLL----ERMEQEGYVPDTKEVLL 218
E++++ L + ++ GY PD VL
Sbjct: 417 EKRISKKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLF 476
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+EEE+K++ L YH E+LA+ F ++ D TIRV+KNL K S + RE+
Sbjct: 477 DIEEEEKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREI 536
Query: 279 IVRDNRRFCRHF 290
I+RD RF HF
Sbjct: 537 IIRDRNRF-HHF 547
>gi|449449711|ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Cucumis sativus]
Length = 671
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 183 PNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
P N Y +L + L E+M++ GY+P+T+ VL D+++E K + L H ERLA+ +G+
Sbjct: 559 PENDRIYTLL-----RGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGL 613
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IS+ + IRVIKNL K++SKIV RE+I+RD +RF HF
Sbjct: 614 ISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRF-HHF 660
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 72/231 (31%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE L+ M M + +W +LLSA +VH N++ E
Sbjct: 338 GRAGKIDEALELIKSMPME----------------PNDVLWRSLLSASKVHNNLQAGEIA 381
Query: 175 ADMILMIEPNNTGAYVILIN---------------------------------------- 194
A + ++ YV+L N
Sbjct: 382 AKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHR 441
Query: 195 -----------EALKDLLERMEQ----EGYVPDTKEVLLDVEEEQKKNILYYHGERLALV 239
E++ ++L +ME EGY PDT +VL DV+EE+KK L H ++LA+
Sbjct: 442 FVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIA 501
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ +I T G+ +R+++NL K++S I RE+ VRD RF HF
Sbjct: 502 YALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRF-HHF 551
>gi|115480819|ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group]
Length = 555
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 113/282 (40%), Gaps = 81/282 (28%)
Query: 89 FEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM-----LMAKIKAR 138
F A+ F D+ I +S+T + C G DEG + +M L I+
Sbjct: 264 FSTDALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHY 323
Query: 139 HAPFSRIMHAGSTEN---------------VWLTLLSACRVHRNVELAEKVADMILMIEP 183
+ AG E +W LL ACR HRN E+ + VA IL ++P
Sbjct: 324 GCTVDLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDP 383
Query: 184 NNTGAYVILIN--------EALKDLLERMEQ----------------------------- 206
+ GA+V L N + ++++ M+Q
Sbjct: 384 QHAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHP 443
Query: 207 ------------------EGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDG 248
+G+ P TK V D++EE K+ + H E+LA+ FG+I+T G
Sbjct: 444 QSDQIYAMLDEIGKTLSLKGHKPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRG 503
Query: 249 TTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IR++KNL KVVS++ R ++VRD RF HF
Sbjct: 504 AVIRIVKNLRICEDCHSVMKVVSEVYDRVIVVRDRNRF-HHF 544
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 111/276 (40%), Gaps = 76/276 (27%)
Query: 88 VFEIMAVRDFLEYCDYAISRNSITAGCGQNGPFDEGLKFFGQMLM--------------- 132
+FE MA R +Y ++ S+ + C + G + G+K F M
Sbjct: 348 LFEEMAPRGCGPTPNY-MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIV 406
Query: 133 -----AKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
A + R F + M T +VW L +ACR+H +L A+ + ++P ++G
Sbjct: 407 DMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG 466
Query: 188 AYVIL---------------------------------------------------INEA 196
+V+L +N+
Sbjct: 467 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 526
Query: 197 LKDLLERMEQE----GYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
++ L ++ E GY PD K L D+EEE+K + +H E+LAL FG++S P IR
Sbjct: 527 IQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIR 586
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCR 288
+ KNL K VS V RE+IVRDN RF R
Sbjct: 587 ITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHR 622
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 100/253 (39%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQM------------------LMAKIKARHAPFSRI--MHAGSTE 152
C +G D+G+++F +M L+ + +A I M
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
VW+ LLS CR+H VEL E A I + NN G+Y +L N
Sbjct: 648 VVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLM 707
Query: 195 --------------EALKDLLERMEQEGYVPDTKEV-----------------------L 217
E +K + P KE+ L
Sbjct: 708 RHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFAL 767
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++E+K ++L+ H E+LAL +GI++TP G IR+ KNL +S+I+ E
Sbjct: 768 HDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHE 827
Query: 278 MIVRDNRRFCRHF 290
+I+RD+ RF HF
Sbjct: 828 IILRDSSRF-HHF 839
>gi|358357158|gb|AEU08419.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L L ER++ EGY+PDT+ VL +++EE K+ L+ H E+LA+ +G+I PDG IR
Sbjct: 52 IYAELNRLTERIKAEGYIPDTRLVLENIDEEGKERALFSHSEKLAIAYGLIRIPDGKPIR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +SK+ RE++ RD RF HF
Sbjct: 112 VYKNLRVCPDCHTATKFISKVTGREIVARDGNRF-HHF 148
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 79/326 (24%)
Query: 41 AVSIGHYADLDGISDQLPSSSGGRQVDIH-FDGGVDGLRPSRSGSVRKVFEIMAVRDFLE 99
A I YA I + + S R+ D+ + + GL + +G + ++
Sbjct: 263 AALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGL--AMNGCSEEALQLFEQMKGEG 320
Query: 100 YCDYAISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHA----- 140
+S ++ C G ++G +F M M + R
Sbjct: 321 ISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEA 380
Query: 141 -PFSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN---EA 196
F M +W LL ACRV+ N E+ ++V +++ + N+ G Y++L N E+
Sbjct: 381 EKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAES 440
Query: 197 LK----------------------------------------------------DLLERM 204
+K ++++ +
Sbjct: 441 MKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVKEI 500
Query: 205 EQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLR 264
++ GY +T+ V+ DVEEE+K+ ++ +H E+LA+ FG + T G+T+R++KN+
Sbjct: 501 KKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVAFGFLYTKSGSTLRIVKNIRICSDCH 560
Query: 265 HGNKVVSKIVHREMIVRDNRRFCRHF 290
+ K+VSK+ R++ +RD + F HF
Sbjct: 561 YAIKLVSKVFKRKIAIRDRKCF-HHF 585
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 90/223 (40%), Gaps = 75/223 (33%)
Query: 110 ITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAG--------------- 149
+ A C +G ++G+ +F M + AK + + AG
Sbjct: 490 VLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFE 549
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN--------------- 194
+W LL A R+HRN EL A+ I +EP N G YV+L N
Sbjct: 550 PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMR 609
Query: 195 ------------------------------------EALKDLLE----RMEQEGYVPDTK 214
E + LE RM++ GYV T
Sbjct: 610 VMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATD 669
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
VL DVEEE+K+++L YH E+LA+ +GI++ P G IRVIKNL
Sbjct: 670 MVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNL 712
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 101/262 (38%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSR----- 144
AI+ ++ + C +G EG K+F M+ M + R
Sbjct: 862 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 921
Query: 145 -IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------- 190
M +W LL +CR+H+N++ AE A + +EPNN+ Y+
Sbjct: 922 HTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 981
Query: 191 ----------------------ILINE--------------------ALKDLLERMEQEG 208
I IN+ L L+ M++ G
Sbjct: 982 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1041
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD V +++E +K+ IL H E+LA+ +G+I G IRVIKN K
Sbjct: 1042 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 1101
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+S + RE+ +RD RF HF
Sbjct: 1102 YISLVKARELFLRDGVRF-HHF 1122
>gi|190612777|gb|ACE80766.1| pentatricopeptide repeat protein [Porella platyphylla]
gi|358357144|gb|AEU08412.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 152
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
++ I E L + M++EGY+PDT VL DV+EE+K+ L H E+LA+ FG+ISTP T
Sbjct: 49 IVEIFEELDRVSGLMKEEGYLPDTSFVLHDVDEEKKEARLCRHSEKLAIAFGLISTPAAT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+R+ KNL K ++K+ RE+IVRD RF HF
Sbjct: 109 PLRIFKNLRVCGDCHTATKFIAKVTGREIIVRDANRF-HHF 148
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
+W +L ACR+H EL EK+ + ++ ++P G YV L +
Sbjct: 232 LWAMVLCACRIHGLAELGEKIGNRLIELDPTYDGHYVQLASIYANSRKWEDVVRVRRLMA 291
Query: 195 -------------EA-------------------LKDLLERMEQE----GYVPDTKEVLL 218
EA ++ +LE +E GYVP+ VL
Sbjct: 292 ERNTSKVAGWSLIEARGKVHRFVAGHREHEQSLEIQKMLEIIETRLAAAGYVPNVSPVLH 351
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D+ EE+K+N + H ERLA+ FG++ T G+ IR++KNL K++S++ RE+
Sbjct: 352 DIGEEEKENAIKVHSERLAIAFGLLVTGPGSCIRIVKNLRVCWDCHEVTKMISRVFEREI 411
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 412 IVRDGSRF-HHF 422
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 63/94 (67%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+++ E++ GY PDTKEVL+DV EE K +L +H ER+AL G++++ G T+
Sbjct: 494 IRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLH 553
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL K+VSK++HR+++VRD+ RF
Sbjct: 554 IVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRF 587
>gi|302759362|ref|XP_002963104.1| hypothetical protein SELMODRAFT_78378 [Selaginella moellendorffii]
gi|300169965|gb|EFJ36567.1| hypothetical protein SELMODRAFT_78378 [Selaginella moellendorffii]
Length = 542
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 179 LMIEPNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLAL 238
L + P + G I+ +K L E ++ GYVPDT V+ DVEE +K+ +L+ H ER+A+
Sbjct: 426 LHLHPEHKG-----IDSEMKRLEELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAI 480
Query: 239 VFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FG++ T +RV+ NL K++SK V RE++VRD RRF HF
Sbjct: 481 AFGLMRGGSDTIVRVVNNLRICSDCHAAVKLISKTVGREILVRDTRRF-HHF 531
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 100/262 (38%), Gaps = 76/262 (29%)
Query: 104 AISRNSITAGCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSR----- 144
AI+ ++ + C +G EG K+F M+ M + R
Sbjct: 1137 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 1196
Query: 145 -IMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYV------------- 190
M +W LL +CR+H+N+ AE A + +EPNN+ Y+
Sbjct: 1197 HTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 1256
Query: 191 ----------------------ILINE--------------------ALKDLLERMEQEG 208
I IN+ L L+ M++ G
Sbjct: 1257 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1316
Query: 209 YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNK 268
YVPD V +++E +K+ IL H E+LA+ +G+I G IRVIKN K
Sbjct: 1317 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 1376
Query: 269 VVSKIVHREMIVRDNRRFCRHF 290
+S + RE+ +RD RF HF
Sbjct: 1377 YISLVKARELFLRDGVRF-HHF 1397
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 109/274 (39%), Gaps = 80/274 (29%)
Query: 93 AVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQML--------------MA 133
AV F + D + IT C + G EG ++F M+ M
Sbjct: 348 AVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMV 407
Query: 134 KIKARHAPFSRI------MHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTG 187
+ R S MH +W T+LSAC+ H V+L V + ++ +EP + G
Sbjct: 408 DLLGRAGLVSEAIELIEGMHIAPDPVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDG 467
Query: 188 AYVIL------------INEALKDLLER----------MEQEG----------------- 208
YV+L + E K + R ME +G
Sbjct: 468 HYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWSLMEAQGNLHKFLVGDMDHKDSVQ 527
Query: 209 ----------------YVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
YVPD VL D+ +E+K + + H ERLA+ +G I T G+ IR
Sbjct: 528 IYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVTEVGSPIR 587
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL +K+V+K+ +RE+IVRD RF
Sbjct: 588 IVKNLQVCGDCHEFSKMVTKVFNREIIVRDGSRF 621
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 63/94 (67%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+++ E++ GY PDTKEVL+DV EE K +L +H ER+AL G++++ G T+
Sbjct: 548 IRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLH 607
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
++KNL K+VSK++HR+++VRD+ RF
Sbjct: 608 IVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRF 641
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 114/291 (39%), Gaps = 83/291 (28%)
Query: 82 SGSVRKVFEIMAVRDFLEYCDYAISRNSIT-----AGCGQNGPFDEGLKFFGQM------ 130
SG F A+ F E + IS T + C +G DEG+ FF +M
Sbjct: 291 SGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFK 350
Query: 131 -------------LMAKIKARHAPFSRI--MHAGSTENVWLTLLSACRVHRNVELAEKV- 174
L+ + + +S I M +W TLL ACRVH NVEL E+V
Sbjct: 351 IKPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVI 410
Query: 175 -----------ADMILMIEP-----------------------NNTGAYVILIN------ 194
D +L++ N G I +
Sbjct: 411 AHLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEF 470
Query: 195 ----------EALKDLLERMEQE----GYVPDTKEVLLDVE-EEQKKNILYYHGERLALV 239
E + +L + Q+ GYV + L +++ EE+K L YH E+LA+
Sbjct: 471 IVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLDSEEEKGYALRYHSEKLAIA 530
Query: 240 FGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
FGI+ TP TTIRV KNL + + K VS + R +IVRD RF HF
Sbjct: 531 FGILVTPPETTIRVTKNLRTCVDCHNFAKFVSDVYDRVVIVRDRSRF-HHF 580
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 57/205 (27%)
Query: 142 FSRIMHAGSTENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------- 194
F + M T VW LL AC++H N EL E A +L ++P N G YV++ N
Sbjct: 743 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERR 802
Query: 195 -EALKDLLERMEQEGYV------------------------PDTKEV------------- 216
+ ++ + RM+ G P + E+
Sbjct: 803 WKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 862
Query: 217 -----------LLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRH 265
L + +EE+K +LY H ERLA+ +G+++TP+G ++R+ KNL +
Sbjct: 863 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHN 922
Query: 266 GNKVVSKIVHREMIVRDNRRFCRHF 290
K++SK RE+++RD RF HF
Sbjct: 923 FCKLISKFFERELVMRDANRF-HHF 946
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I AL++++ R+ + GY P+T VL D+ EE+K+ L YH E+LA+ FG+I+TP G T+R
Sbjct: 487 IYRALEEIVSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLR 546
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
VIKNL + K++SK R +I+RD RF
Sbjct: 547 VIKNLRTCGDCHVVAKLISKAYGRVIIIRDRARF 580
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I L+ L +M +EGYVPD VL DVE+ +K +L +H E+LA+ FG++ P G IR
Sbjct: 636 IYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIR 695
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRF 286
V+KNL + K +SKI RE++VRD RF
Sbjct: 696 VVKNLRVCGDCHNATKYISKISQREILVRDAVRF 729
>gi|414878625|tpg|DAA55756.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 465
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 105/241 (43%), Gaps = 61/241 (25%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------- 153
SI C G DEGL+++G M L IK + AG +
Sbjct: 213 SILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAF 272
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEAL----------- 197
VW +LL++CR+H ++E + VAD I+ +EP ++ +YVIL N L
Sbjct: 273 HDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKT 332
Query: 198 KDL-----------LERMEQEGYV----------PDTKEVLLDVEE---------EQKKN 227
+DL L +E V P++K + V E ++++
Sbjct: 333 RDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGISSREQD 392
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
+ H E+LA+ FG+I P IRV+KNL R +++SK RE+I+RD RF
Sbjct: 393 LAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFH 452
Query: 288 R 288
R
Sbjct: 453 R 453
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 105/241 (43%), Gaps = 61/241 (25%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------- 153
SI C G DEGL+++G M L IK + AG +
Sbjct: 524 SILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAF 583
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILINEAL----------- 197
VW +LL++CR+H ++E + VAD I+ +EP ++ +YVIL N L
Sbjct: 584 HDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKT 643
Query: 198 KDL-----------LERMEQEGYV----------PDTKEVLLDVEE---------EQKKN 227
+DL L +E V P++K + V E ++++
Sbjct: 644 RDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGISSREQD 703
Query: 228 ILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFC 287
+ H E+LA+ FG+I P IRV+KNL R +++SK RE+I+RD RF
Sbjct: 704 LAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFH 763
Query: 288 R 288
R
Sbjct: 764 R 764
>gi|190612751|gb|ACE80753.1| pentatricopeptide repeat protein [Metzgeria furcata]
Length = 152
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 190 VILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGT 249
+ I+ LK L ++E+ GY PDT VL DVEEE K + L H E+LA+ +G+ISTP GT
Sbjct: 49 ITKIHAELKRLYNQIEEAGYEPDTSFVLHDVEEEDKLSFLGNHSEKLAIAYGLISTPPGT 108
Query: 250 TIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+R+ KNL K +SK+V R +IVRD RF HF
Sbjct: 109 PLRIFKNLRVCGDCHMVTKFISKVVGRPIIVRDANRF-HHF 148
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I++ L +L +M+ GYVPD + L DVEEE K+ +L +H E+LA+ FG++ T GT IR
Sbjct: 560 IHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIR 619
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +S I RE+IVRD RF HF
Sbjct: 620 VFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRF-HHF 656
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE + +M PF+ HA ++ TLL ACR+H+N++LAE
Sbjct: 443 GRAGRLDEAVSLIKEM----------PFTP--HAA----IYGTLLGACRIHKNLDLAEFA 486
Query: 175 ADMILMIEPNNTGAYVILIN 194
A +L ++P + YV L N
Sbjct: 487 ARNLLNLDPTSATGYVQLAN 506
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLE 202
+W LL+ R+H +VE E +L ++P N+ AYV+L N L+DL+E
Sbjct: 367 IWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLME 426
Query: 203 --------------------------------------------RMEQEGYVPDTKEVLL 218
R+E+ GY +T EVLL
Sbjct: 427 VRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLL 486
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
D++EE K+ L H E+LA+ + + T GTTIR++KNL K++SK +RE+
Sbjct: 487 DLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREI 546
Query: 279 IVRDNRRFCRHF 290
IVRD RF HF
Sbjct: 547 IVRDCNRF-HHF 557
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 85/192 (44%), Gaps = 56/192 (29%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMI-------------------------------- 181
+W TLLSAC VH+N+E+ E A +L +
Sbjct: 788 IWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMK 847
Query: 182 ------EP--------NNTGAYVI---------LINEALKDLLERMEQEGYVPDTKEVLL 218
EP N+ A+ + I E + DL ER + GYV D +L
Sbjct: 848 DRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLN 907
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREM 278
DVE+EQK Y H E+LA+ FG++S + IRVIKNL + K VSKI +R +
Sbjct: 908 DVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAI 967
Query: 279 IVRDNRRFCRHF 290
+VRD RF HF
Sbjct: 968 VVRDAYRF-HHF 978
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 75/254 (29%)
Query: 110 ITAGCGQNGPFDEGLKFFGQMLM--------------------AKIKARHAPFSRIMHAG 149
+ C G DEG +F M M A + R F M
Sbjct: 342 VLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMK 401
Query: 150 STENVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAY-----VILINEALKD----- 199
+W TL++ACR H +EL E + +L P + Y V + + K+
Sbjct: 402 PNPIIWRTLVAACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIR 461
Query: 200 -----------------------------------------LLERMEQE----GYVPDTK 214
++E M +E G++ T
Sbjct: 462 REMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELKHVGHISATS 521
Query: 215 EVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIV 274
EVLLD++EE K+ L +H E+LA+ F ++ TP GT +RV+KNL K +S +
Sbjct: 522 EVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVY 581
Query: 275 HREMIVRDNRRFCR 288
+RE+IVRD RF R
Sbjct: 582 NREIIVRDRSRFHR 595
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I++ L +L +M+ GYVPD + L DVEEE K+ +L +H E+LA+ FG++ T GT IR
Sbjct: 560 IHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIR 619
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
V KNL K +S I RE+IVRD RF HF
Sbjct: 620 VFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRF-HHF 656
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 115 GQNGPFDEGLKFFGQMLMAKIKARHAPFSRIMHAGSTENVWLTLLSACRVHRNVELAEKV 174
G+ G DE + +M PF HA ++ TLL ACR+H+N++LAE
Sbjct: 443 GRAGRLDEAVSLIKEM----------PFKP--HAA----IYGTLLGACRIHKNLDLAEFA 486
Query: 175 ADMILMIEPNNTGAYVILIN 194
A +L ++P + YV L N
Sbjct: 487 ARNLLNLDPTSATGYVQLAN 506
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 102/253 (40%), Gaps = 76/253 (30%)
Query: 113 GCGQNGPFDEGLKFFGQML--------------MAKIKARHAPFSRIMH------AGSTE 152
C +G D+G+ +F M+ M + R + M T
Sbjct: 593 ACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTA 652
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------ 194
VW+ LLSA R+H N+EL E A + + N G+Y +L N
Sbjct: 653 VVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLM 712
Query: 195 ---------------------------------EALKDLL----ERMEQEGYVPDTKEVL 217
E + +LL +R++ GYVP T L
Sbjct: 713 KHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFAL 772
Query: 218 LDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHRE 277
DV++E+K ++L+ H E+LA+ +GI++T G IR+ KNL +S I+ E
Sbjct: 773 HDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHE 832
Query: 278 MIVRDNRRFCRHF 290
+++RD+ RF HF
Sbjct: 833 IVLRDSSRF-HHF 844
>gi|367064015|gb|AEX12054.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 73/159 (45%), Gaps = 55/159 (34%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW LL+ACR H NV+L E+VA + ++ N YV+L N
Sbjct: 1 VWGCLLAACRTHTNVDLGERVAKSLFELDSKNPSYYVLLSNIYAACSRWDDVKRVRKIMK 60
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
E + D+LE+ M GYVP+ L
Sbjct: 61 DQGIQKMPGSSWIEVNGKVYAFLVGDKSHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALH 120
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
DVEEEQK+NIL +H E+LA+ FG+++T GTTIR+ KNL
Sbjct: 121 DVEEEQKENILGHHSEKLAIAFGLMNTSCGTTIRITKNL 159
>gi|449485419|ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g25580-like [Cucumis sativus]
Length = 731
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 183 PNNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGI 242
P N Y +L + L E+M++ GY+P+T+ VL D+++E K + L H ERLA+ +G+
Sbjct: 619 PENDRIYTLL-----RGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGL 673
Query: 243 ISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
IS+ + IRVIKNL K++SKIV RE+I+RD +RF HF
Sbjct: 674 ISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRF-HHF 720
>gi|190612653|gb|ACE80704.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 184 NNTGAYVILINEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGII 243
+ T + I+ L+ L E+M++ GYVPDT+ VL DVEEE+K L +H E+LA+ FG++
Sbjct: 43 DQTHPQIKEIHAELERLSEQMKEAGYVPDTRLVLHDVEEEEKILRLCHHSEKLAIAFGLL 102
Query: 244 STPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
ST GT +R+ K+L K+++K+ RE++VRD RF HF
Sbjct: 103 STVPGTPLRIYKSLRVCTDCHTATKIIAKVEGREIVVRDANRF-HHF 148
>gi|367064007|gb|AEX12050.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064009|gb|AEX12051.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064013|gb|AEX12053.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064017|gb|AEX12055.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064025|gb|AEX12059.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064027|gb|AEX12060.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064033|gb|AEX12063.1| hypothetical protein 0_18789_01 [Pinus taeda]
gi|367064035|gb|AEX12064.1| hypothetical protein 0_18789_01 [Pinus taeda]
Length = 161
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 73/159 (45%), Gaps = 55/159 (34%)
Query: 154 VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN------------------- 194
VW LL+ACR H NV+L E+VA + ++ N YV+L N
Sbjct: 1 VWGCLLAACRTHTNVDLGERVAKSLFELDSKNPSYYVLLSNIYAACSRWDDVKRVRKIMK 60
Query: 195 --------------------------------EALKDLLER----MEQEGYVPDTKEVLL 218
E + D+LE+ M GYVP+ L
Sbjct: 61 DEGIQKMPGSSWIEVNGKVYAFLVGDKSHPQSEKIYDMLEKLFGKMMDAGYVPEIDFALH 120
Query: 219 DVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNL 257
DVEEEQK+NIL +H E+LA+ FG+++T GTTIR+ KNL
Sbjct: 121 DVEEEQKENILGHHSEKLAIAFGLMNTSCGTTIRITKNL 159
>gi|147776476|emb|CAN67357.1| hypothetical protein VITISV_032923 [Vitis vinifera]
Length = 485
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 39/172 (22%)
Query: 157 TLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN-----------EALKDLLER-- 203
LL CR+H N EL E V ++ ++P +G Y++L N +++L++
Sbjct: 304 ALLGGCRIHGNFELGEMVGKXLINLQPCXSGRYILLSNIYAAAKKWDDARKVRNLMKVNX 363
Query: 204 ---------MEQEG----------------YVPDTKEVLLDVEEEQKKNILYYHGERLAL 238
+E +G Y DT VLLD+EEE K++ L H E+LA+
Sbjct: 364 ISKVXGVSVIEXKGMVHRFVAGDWLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAI 423
Query: 239 VFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+G++ IR++KNL R H K++SK+ RE+IVRD +F HF
Sbjct: 424 AYGLLHLDSKEAIRIVKNLRVCRDCHHVXKLISKVYGREIIVRDRNQF-HHF 474
>gi|77553572|gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 605
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 76/257 (29%)
Query: 109 SITAGCGQNGPFDEGLKFFGQM-----LMAKIKARHAPFSRIMHAGSTEN---------- 153
S+ C G DEGL +F +M + +I+ + AG N
Sbjct: 339 SVMCACAHAGLVDEGLDYFDRMEIEFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLI 398
Query: 154 -----VWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVIL---------------- 192
++ +L+ AC +H +EL EK+ ++ +EP+++G +V++
Sbjct: 399 VPNAAIYRSLIRACGIHGKLELGEKMIAELMRLEPDDSGNHVLISNFYARTNRWEDAKKA 458
Query: 193 -------------------INEALKDLL--------------------ERMEQEGYVPDT 213
IN L + L R+ + G T
Sbjct: 459 RKEMKSMGIDKNPGSSLVDINGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSST 518
Query: 214 KEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKVVSKI 273
L DVEEE K + L YH ERLA+ F +I++ G IR+IKNL K+VS++
Sbjct: 519 SSALFDVEEEDKADTLSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRV 578
Query: 274 VHREMIVRDNRRFCRHF 290
RE+++RD RF HF
Sbjct: 579 YGREIVMRDRTRF-HHF 594
>gi|190612947|gb|ACE80851.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 193 INEALKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIR 252
I E L + M++ GY+PDT VL DV+E K+ L +H E+LA+ G+ISTP GT +R
Sbjct: 52 ILEELDRVFALMKEAGYIPDTSFVLHDVDEGTKEFWLCHHSEKLAIALGLISTPPGTPLR 111
Query: 253 VIKNLPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
+ KNL K +SKIV RE+IVRD RF HF
Sbjct: 112 IFKNLRVCGDCHTATKFMSKIVGREIIVRDASRF-HHF 148
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 101/261 (38%), Gaps = 76/261 (29%)
Query: 105 ISRNSITAGCGQNGPFDEGLKFFGQM--------------LMAKIKARHAPFSRIMHA-- 148
I+ S+ C G DE ++F M M + R M
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 666
Query: 149 ----GSTENVWLTLLSACRVHRNVELAEKVADMILMIEPN---------NTGAYVILINE 195
+ +VW LL A RVH++ EL + A+ + ++EP NT A + NE
Sbjct: 667 SMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNE 726
Query: 196 ALK----------------------------------------------DLLERMEQEGY 209
K +L + M + GY
Sbjct: 727 VAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGY 786
Query: 210 VPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKNLPSLRGLRHGNKV 269
+P+ L D++ +K+ +L +H ERLA+ F ++STP G IRV KNL R K
Sbjct: 787 IPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKF 846
Query: 270 VSKIVHREMIVRDNRRFCRHF 290
+S IV RE+I+RD RF HF
Sbjct: 847 ISNIVSREIIIRDINRF-HHF 866
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 197 LKDLLERMEQEGYVPDTKEVLLDVEEEQKKNILYYHGERLALVFGIISTPDGTTIRVIKN 256
L+DL RM++ GYV T VL DVEEE+K+++L YH E+LA+ +GI+ P G IRVIKN
Sbjct: 721 LEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKN 780
Query: 257 LPSLRGLRHGNKVVSKIVHREMIVRDNRRFCRHF 290
L R K +S I R +I+RD+ RF HF
Sbjct: 781 LRVCRDCHTAFKCISAIEGRLIILRDSNRF-HHF 813
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 153 NVWLTLLSACRVHRNVELAEKVADMILMIEPNNTGAYVILIN 194
+W LL A R+HRN EL A+ I +EP N G YV+L N
Sbjct: 622 TMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSN 663
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,592,467,763
Number of Sequences: 23463169
Number of extensions: 191218798
Number of successful extensions: 528279
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3437
Number of HSP's successfully gapped in prelim test: 296
Number of HSP's that attempted gapping in prelim test: 519188
Number of HSP's gapped (non-prelim): 8392
length of query: 296
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 155
effective length of database: 9,050,888,538
effective search space: 1402887723390
effective search space used: 1402887723390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)