BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044950
(258 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6-
Phosphate Dehydrogenase Complexed With Structural And
Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
Length = 489
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Query: 76 EDLRSMIASTLSC--RIDHCNFILGQY--------KATSG--DKVDVKLNSLTPMYFVVV 123
+D+R L C + N +LGQY +AT G D V S T + VV
Sbjct: 256 DDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVV 315
Query: 124 LYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDV 183
LY++N WDGVPF+++ G L + E+ +QF V G+I+H+ NEL++R
Sbjct: 316 LYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQ------CKRNELVIRVQ 369
Query: 184 LDEAIPVRVNNKVPGLSLQLDASELNLLYKAKY-NVEVPDSYEHLLLDVVNGDNHLFMKS 242
+EA+ ++ K PG+ + SEL+L Y +Y NV++PD+YE L+LDV G F++S
Sbjct: 370 PNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRS 429
Query: 243 DELTAAWNILNPVLQE 258
DEL AW I P+L +
Sbjct: 430 DELREAWRIFTPLLHQ 445
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRS----MIASTLSCRI 90
GA+G+ A++KI P ++ L+ G LPE N IVGY+R LT D+R +T ++
Sbjct: 12 GASGDLAKKKIYPTIWWLFRDGLLPE-NTFIVGYARSRLTVADIRKQSEPFFKATPEEKL 70
Query: 91 DHCNF------ILGQY-KATSGDKVDVKLNSL 115
+F + GQY A S +++ +N+L
Sbjct: 71 KLEDFFARNSYVAGQYDDAASYQRLNSHMNAL 102
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
Length = 514
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Query: 76 EDLRSMIASTLSC--RIDHCNFILGQY--------KATSG--DKVDVKLNSLTPMYFVVV 123
+D+R L C + N +LGQY +AT G D V S T + VV
Sbjct: 281 DDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVV 340
Query: 124 LYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESFGHNIDLATNELILRDV 183
LY++N WDGVPF+++ G L + E+ +QF V G+I+H+ NEL++R
Sbjct: 341 LYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQ------CKRNELVIRVQ 394
Query: 184 LDEAIPVRVNNKVPGLSLQLDASELNLLYKAKY-NVEVPDSYEHLLLDVVNGDNHLFMKS 242
+EA+ ++ K PG+ + SEL+L Y +Y NV++PD+YE L+LDV G F++S
Sbjct: 395 PNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRS 454
Query: 243 DELTAAWNILNPVLQE 258
DEL AW I P+L +
Sbjct: 455 DELLEAWRIFTPLLHQ 470
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRS----MIASTLSCRI 90
GA+G+ A++KI P ++ L+ G LPE N IVGY+R LT D+R +T ++
Sbjct: 37 GASGDLAKKKIYPTIWWLFRDGLLPE-NTFIVGYARSRLTVADIRKQSEPFFKATPEEKL 95
Query: 91 DHCNF------ILGQY-KATSGDKVDVKLNSL 115
+F + GQY A S +++ +N+L
Sbjct: 96 KLEDFFARNSYVAGQYDDAASYQRLNSHMNAL 127
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 16/195 (8%)
Query: 71 KNLTDEDLRSMIASTLSCRI--DHCNFILGQYKATSG-------DKVDVKLNSLTPMYFV 121
++L+ ED+R L + + +LGQY A++ D V S P + V
Sbjct: 309 RSLSAEDIRDEKVQVLRQVVPANPAECVLGQYTASADGSTPGYLDDPSVPKGSHCPTFAV 368
Query: 122 VVLYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESFGHNIDLATNELILR 181
+ L+++N W GVPF+I+ G L ++I IQF+ FG + NEL++R
Sbjct: 369 LRLHVNNDRWHGVPFIIRAGKALEERLLDIRIQFKD-----EIRPFGESTQ--RNELVIR 421
Query: 182 DVLDEAIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYEHLLLDVVNGDNHLFMK 241
EA+ +++ K PGL +EL+L Y+ +Y+V +PD+YE L+ + + G++ F++
Sbjct: 422 AQPSEAMYLKLTAKTPGLLNDTHQTELDLTYERRYDVTLPDAYESLIHEALLGNSTNFVR 481
Query: 242 SDELTAAWNILNPVL 256
DEL AAW I P+L
Sbjct: 482 VDELDAAWRIYTPLL 496
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 25 RAPSLCIAARGATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTD-EDLRSMIA 83
R+ +L I GA+G+ A++K PALF LY +G LP +V I+GY+R + D E +
Sbjct: 51 RSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPR-DVNILGYARSTMEDVEKWKKDTL 109
Query: 84 STLSCRIDHCNFILGQY 100
+ R+D +G +
Sbjct: 110 AGFFTRLDERGCHVGNF 126
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose
6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides
With Nadp+
Length = 485
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 65 IVGY----SRKNLTDEDLRSMIASTLSC-RI-DHCN----FILGQYKATSG-------DK 107
IVG+ ++ TD+D+R+ + + +I D F+ QY A ++
Sbjct: 244 IVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEE 303
Query: 108 VDVKLNSLTPMYFVVVLYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESF 167
+DV +S + L D W+GVPF +++G L + + I F+ +F
Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK-------AGTF 356
Query: 168 GHNIDLATNELILRDVLDE--AIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYE 225
+ E +L ++D AI +++N K + +L + P+ YE
Sbjct: 357 NFGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYE 416
Query: 226 HLLLDVVNGDNHLFMKSDELTAAWNILNPV 255
++ D +NGD F + ++ AW ++ +
Sbjct: 417 RMIHDTMNGDGSNFADWNGVSIAWKFVDAI 446
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRSMIASTLSCRID 91
G TG+ A+RK+ P++F LY G+L + + IVG +R+ L D++ + ++ ++ D
Sbjct: 12 GGTGDLAKRKLYPSVFNLYKKGYL-QKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1E7Y|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides Complexed
With Substrate And Nadph
Length = 485
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 65 IVGY----SRKNLTDEDLRSMIASTLSC-RI-DHCN----FILGQYKATSG-------DK 107
IVG+ ++ TD+D+R+ + + +I D F+ QY A ++
Sbjct: 244 IVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEE 303
Query: 108 VDVKLNSLTPMYFVVVLYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESF 167
+DV +S + L D W+GVPF +++G L + + I F+ +F
Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK-------AGTF 356
Query: 168 GHNIDLATNELILRDVLDE--AIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYE 225
+ E +L ++D AI +++N K + +L + P+ YE
Sbjct: 357 NFGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYE 416
Query: 226 HLLLDVVNGDNHLFMKSDELTAAWNILNPV 255
++ D +NGD F + ++ AW ++ +
Sbjct: 417 RMIHDTMNGDGSNFADWNGVSIAWKFVDAI 446
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRSMIASTLSCRID 91
G TG+ A+RK+ P++F LY G+L + + IVG +R+ L D++ + ++ ++ D
Sbjct: 12 GGTGDLAKRKLYPSVFNLYKKGYL-QKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
pdb|1DPG|B Chain B, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
Length = 485
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 65 IVGY----SRKNLTDEDLRSMIASTLSCR--IDHCN----FILGQYKATSG-------DK 107
IVG+ ++ TD+D+R+ + + D F+ QY A ++
Sbjct: 244 IVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEE 303
Query: 108 VDVKLNSLTPMYFVVVLYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESF 167
+DV +S + L D W+GVPF +++G L + + I F+ +F
Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK-------AGTF 356
Query: 168 GHNIDLATNELILRDVLDE--AIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYE 225
+ E +L ++D AI +++N K + +L + P+ YE
Sbjct: 357 NFGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYE 416
Query: 226 HLLLDVVNGDNHLFMKSDELTAAWNILNPV 255
++ D +NGD F + ++ AW ++ +
Sbjct: 417 RMIHDTMNGDGSNFADWNGVSIAWKFVDAI 446
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRSMI 82
G TG+ A+RK+ P++F LY G+L + + IVG +R+ L D++ + ++
Sbjct: 12 GGTGDLAKRKLYPSVFNLYKKGYL-QKHFAIVGTARQALNDDEFKQLV 58
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1H94|A Chain A, Complex Of Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From L.Mesenteroides With Coenzyme Nad
Length = 485
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 65 IVGY----SRKNLTDEDLRSMIASTLSCR--IDHCN----FILGQYKATSG-------DK 107
IVG+ ++ TD+D+R+ + + D F+ QY A ++
Sbjct: 244 IVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEE 303
Query: 108 VDVKLNSLTPMYFVVVLYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESF 167
+DV +S + L D W+GVPF +++G L + + I F+ +F
Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK-------AGTF 356
Query: 168 GHNIDLATNELILRDVLDE--AIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYE 225
+ E +L ++D AI +++N K + +L + P+ YE
Sbjct: 357 NFGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYE 416
Query: 226 HLLLDVVNGDNHLFMKSDELTAAWNILNPV 255
++ D +NGD F + ++ AW ++ +
Sbjct: 417 RMIHDTMNGDGSNFADWNGVSIAWKFVDAI 446
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRSMIASTLSCRID 91
G TG+ A+RK+ P++F LY G+L + + IVG +R+ L D++ + ++ ++ D
Sbjct: 12 GGTGDLAKRKLYPSVFNLYKKGYL-QKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides With
Substrate
pdb|1H9A|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From L. Mesenteroides With Coenzyme Nadp
pdb|1H9B|A Chain A, Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
Length = 485
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 26/210 (12%)
Query: 65 IVGY----SRKNLTDEDLRSMIASTLSCR--IDHCN----FILGQYKATSG-------DK 107
IVG+ ++ TD+D+R+ + + D F+ QY A ++
Sbjct: 244 IVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEE 303
Query: 108 VDVKLNSLTPMYFVVVLYIDNASWDGVPFLIKTGMGLIRHRVEIHIQFRHVPGNIYHESF 167
+DV +S + L D W+GVPF +++G L + + I F+ +F
Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK-------AGTF 356
Query: 168 GHNIDLATNELILRDVLDE--AIPVRVNNKVPGLSLQLDASELNLLYKAKYNVEVPDSYE 225
+ E +L ++D AI +++N K + +L + P+ YE
Sbjct: 357 NFGSEQEACEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYE 416
Query: 226 HLLLDVVNGDNHLFMKSDELTAAWNILNPV 255
++ D +NGD F + ++ AW ++ +
Sbjct: 417 RMIHDTMNGDGSNFADWNGVSIAWKFVDAI 446
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 35 GATGEQARRKILPALFALYYSGFLPEANVGIVGYSRKNLTDEDLRSMIASTLSCRID 91
G TG+ A+RK+ P++F LY G+L + + IVG +R+ L D++ + ++ ++ D
Sbjct: 12 GGTGDLAKRKLYPSVFNLYKKGYL-QKHFAIVGTARQALNDDEFKQLVRDSIKDFTD 67
>pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
pdb|2C49|B Chain B, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
pdb|2C4E|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
Length = 302
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 219 EVPDSYEHLLLDVVNGDNHLFMKSDELTAAWNILN 253
++P + +LL+++ N LFM E A N+LN
Sbjct: 164 DLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLN 198
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,682,489
Number of Sequences: 62578
Number of extensions: 315031
Number of successful extensions: 613
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 584
Number of HSP's gapped (non-prelim): 17
length of query: 258
length of database: 14,973,337
effective HSP length: 97
effective length of query: 161
effective length of database: 8,903,271
effective search space: 1433426631
effective search space used: 1433426631
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)