Query 044951
Match_columns 375
No_of_seqs 202 out of 1610
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:23:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044951.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044951hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 1.2E-38 2.6E-43 303.9 35.9 296 74-373 46-350 (350)
2 KOG1444 Nucleotide-sugar trans 100.0 1.8E-39 4E-44 291.5 26.3 294 74-374 9-303 (314)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.1E-40 6.7E-45 303.4 12.7 295 74-375 14-311 (316)
4 TIGR00817 tpt Tpt phosphate/ph 100.0 1.9E-37 4.1E-42 291.0 30.7 289 78-375 3-297 (302)
5 COG5070 VRG4 Nucleotide-sugar 100.0 2.8E-31 6E-36 224.9 16.7 285 78-374 7-299 (309)
6 KOG1442 GDP-fucose transporter 100.0 1.2E-32 2.7E-37 239.9 1.9 292 76-374 27-330 (347)
7 PF08449 UAA: UAA transporter 100.0 3.4E-28 7.3E-33 228.2 31.0 274 92-375 15-301 (303)
8 KOG1443 Predicted integral mem 100.0 1.1E-29 2.3E-34 225.3 19.2 289 77-371 16-315 (349)
9 PLN00411 nodulin MtN21 family 100.0 8.8E-26 1.9E-30 214.8 32.3 279 82-374 18-331 (358)
10 PRK11272 putative DMT superfam 100.0 4.5E-25 9.7E-30 206.1 31.6 271 79-374 14-288 (292)
11 PRK11689 aromatic amino acid e 99.9 7.7E-25 1.7E-29 204.7 29.9 265 75-370 6-286 (295)
12 PRK11453 O-acetylserine/cystei 99.9 4.1E-24 8.8E-29 200.3 30.4 274 76-371 7-287 (299)
13 TIGR00950 2A78 Carboxylate/Ami 99.9 3.1E-24 6.8E-29 197.0 27.9 250 93-366 5-259 (260)
14 PRK10532 threonine and homoser 99.9 1.6E-23 3.5E-28 195.6 31.6 267 74-373 13-283 (293)
15 PRK15430 putative chlorampheni 99.9 1.1E-22 2.4E-27 190.3 30.6 272 73-369 8-283 (296)
16 PF06027 DUF914: Eukaryotic pr 99.9 2.8E-20 6E-25 173.8 27.4 267 93-373 29-307 (334)
17 TIGR03340 phn_DUF6 phosphonate 99.9 7E-20 1.5E-24 170.1 25.6 271 78-368 6-280 (281)
18 KOG1580 UDP-galactose transpor 99.9 3.3E-21 7.2E-26 165.1 14.5 254 105-368 50-310 (337)
19 TIGR00688 rarD rarD protein. T 99.9 4.9E-19 1.1E-23 162.3 27.7 246 74-346 3-255 (256)
20 COG0697 RhaT Permeases of the 99.8 6E-18 1.3E-22 157.2 32.4 272 79-374 13-290 (292)
21 KOG1581 UDP-galactose transpor 99.8 3.1E-18 6.7E-23 152.8 22.6 261 104-374 47-316 (327)
22 KOG1582 UDP-galactose transpor 99.8 1.4E-17 3.1E-22 145.8 20.0 279 85-373 51-334 (367)
23 PF03151 TPT: Triose-phosphate 99.8 2.7E-18 5.9E-23 144.7 15.2 147 223-371 1-153 (153)
24 TIGR00776 RhaT RhaT L-rhamnose 99.8 1.5E-16 3.2E-21 148.2 27.2 267 76-373 4-290 (290)
25 COG5006 rhtA Threonine/homoser 99.7 2.6E-15 5.5E-20 130.7 26.2 247 95-369 30-280 (292)
26 COG2962 RarD Predicted permeas 99.7 8E-15 1.7E-19 131.0 29.3 278 69-372 3-284 (293)
27 KOG1583 UDP-N-acetylglucosamin 99.7 7.1E-17 1.5E-21 141.9 11.7 254 108-372 33-315 (330)
28 PF04142 Nuc_sug_transp: Nucle 99.7 1.9E-15 4.2E-20 136.5 20.7 210 139-361 14-243 (244)
29 KOG2765 Predicted membrane pro 99.7 1.2E-15 2.6E-20 139.8 17.6 226 140-372 157-391 (416)
30 KOG2234 Predicted UDP-galactos 99.7 1.7E-13 3.8E-18 125.9 28.3 273 88-374 26-325 (345)
31 KOG4510 Permease of the drug/m 99.6 1.7E-16 3.7E-21 138.8 2.9 263 88-373 49-327 (346)
32 KOG3912 Predicted integral mem 99.6 2.5E-13 5.4E-18 119.9 19.7 218 143-371 87-334 (372)
33 TIGR00803 nst UDP-galactose tr 99.3 3.4E-11 7.4E-16 107.9 11.4 187 166-369 2-222 (222)
34 PF00892 EamA: EamA-like trans 99.2 1.2E-10 2.5E-15 94.1 11.1 117 93-213 7-125 (126)
35 COG2510 Predicted membrane pro 99.1 8.6E-10 1.9E-14 86.5 9.8 132 76-214 6-139 (140)
36 KOG4314 Predicted carbohydrate 99.1 9E-10 1.9E-14 92.8 9.3 212 142-369 53-274 (290)
37 KOG2766 Predicted membrane pro 99.0 6.9E-11 1.5E-15 103.3 1.6 256 93-371 34-299 (336)
38 PF13536 EmrE: Multidrug resis 99.0 3.1E-09 6.8E-14 84.7 10.8 104 113-217 2-109 (113)
39 COG2510 Predicted membrane pro 99.0 2.6E-09 5.6E-14 83.9 9.4 135 224-371 5-139 (140)
40 PF06800 Sugar_transport: Suga 99.0 1.6E-07 3.4E-12 85.1 20.8 209 140-368 43-268 (269)
41 PF00892 EamA: EamA-like trans 99.0 3.8E-09 8.2E-14 85.2 9.6 124 232-370 1-125 (126)
42 PRK15430 putative chlorampheni 98.8 3.3E-07 7.1E-12 85.8 15.8 140 219-370 5-144 (296)
43 TIGR00688 rarD rarD protein. T 98.7 3.6E-07 7.7E-12 83.7 15.3 138 222-369 2-140 (256)
44 TIGR00950 2A78 Carboxylate/Ami 98.7 4.6E-07 1E-11 82.9 16.0 131 73-209 128-259 (260)
45 TIGR03340 phn_DUF6 phosphonate 98.6 8.6E-07 1.9E-11 82.3 14.0 132 224-370 3-134 (281)
46 PLN00411 nodulin MtN21 family 98.4 7E-06 1.5E-10 78.6 15.7 137 222-370 13-155 (358)
47 PRK15051 4-amino-4-deoxy-L-ara 98.4 3.1E-06 6.7E-11 67.0 10.5 65 150-214 45-109 (111)
48 PF05653 Mg_trans_NIPA: Magnes 98.4 8E-06 1.7E-10 76.2 13.6 213 150-373 58-294 (300)
49 PRK11272 putative DMT superfam 98.4 1.4E-05 3E-10 74.7 15.3 135 74-216 151-287 (292)
50 PRK10532 threonine and homoser 98.3 4.2E-05 9.1E-10 71.5 16.1 131 75-214 150-281 (293)
51 COG2962 RarD Predicted permeas 98.2 3.5E-05 7.5E-10 69.7 14.0 140 220-372 5-145 (293)
52 PRK11689 aromatic amino acid e 98.2 3.8E-05 8.3E-10 71.8 15.2 129 76-214 159-287 (295)
53 PRK11453 O-acetylserine/cystei 98.1 0.00011 2.4E-09 68.8 16.3 138 74-215 144-288 (299)
54 PF03151 TPT: Triose-phosphate 98.1 0.00026 5.6E-09 59.2 15.8 119 93-212 16-151 (153)
55 PRK02971 4-amino-4-deoxy-L-ara 98.1 0.00016 3.4E-09 58.7 13.5 121 222-374 2-125 (129)
56 PRK13499 rhamnose-proton sympo 98.0 0.0069 1.5E-07 57.3 25.8 233 137-371 68-341 (345)
57 PTZ00343 triose or hexose phos 98.0 0.00033 7.2E-09 67.1 15.9 137 221-370 48-185 (350)
58 TIGR00817 tpt Tpt phosphate/ph 98.0 0.00011 2.4E-09 69.0 12.3 132 78-214 150-293 (302)
59 PF13536 EmrE: Multidrug resis 97.9 0.00026 5.6E-09 56.2 11.0 71 301-372 36-107 (113)
60 PRK02971 4-amino-4-deoxy-L-ara 97.8 0.00027 5.8E-09 57.4 9.9 68 149-216 55-124 (129)
61 TIGR00776 RhaT RhaT L-rhamnose 97.7 0.0005 1.1E-08 64.1 12.8 129 72-214 151-288 (290)
62 COG0697 RhaT Permeases of the 97.7 0.0016 3.5E-08 60.0 15.9 131 75-215 156-288 (292)
63 COG4975 GlcU Putative glucose 97.7 1E-05 2.2E-10 71.1 0.5 266 76-373 5-287 (288)
64 PRK15051 4-amino-4-deoxy-L-ara 97.6 0.00043 9.4E-09 54.7 8.4 63 308-370 45-108 (111)
65 PRK10452 multidrug efflux syst 97.6 0.00061 1.3E-08 54.4 9.1 71 145-215 33-104 (120)
66 PRK10650 multidrug efflux syst 97.5 0.0026 5.6E-08 49.9 12.1 68 145-212 38-106 (109)
67 PRK09541 emrE multidrug efflux 97.5 0.0021 4.5E-08 50.6 11.1 70 146-215 34-104 (110)
68 COG2076 EmrE Membrane transpor 97.5 0.002 4.3E-08 49.8 10.5 71 145-215 33-104 (106)
69 PRK11431 multidrug efflux syst 97.5 0.0026 5.6E-08 49.6 11.0 69 145-213 32-101 (105)
70 PF08449 UAA: UAA transporter 97.4 0.0095 2.1E-07 55.9 15.9 136 78-214 155-297 (303)
71 KOG2922 Uncharacterized conser 97.3 0.0025 5.4E-08 58.6 10.4 209 150-372 72-307 (335)
72 PF06027 DUF914: Eukaryotic pr 97.2 0.0098 2.1E-07 56.2 14.0 138 70-216 165-307 (334)
73 PF04657 DUF606: Protein of un 97.1 0.025 5.4E-07 46.5 13.6 131 224-368 3-138 (138)
74 COG5006 rhtA Threonine/homoser 96.9 0.047 1E-06 48.7 14.3 126 84-213 155-281 (292)
75 PF00893 Multi_Drug_Res: Small 96.7 0.015 3.4E-07 44.2 9.0 58 148-205 35-93 (93)
76 PF04142 Nuc_sug_transp: Nucle 96.7 0.0062 1.3E-07 55.2 8.0 73 300-372 18-90 (244)
77 PRK09541 emrE multidrug efflux 96.6 0.013 2.7E-07 46.2 7.9 66 307-372 37-104 (110)
78 PF06800 Sugar_transport: Suga 96.6 0.079 1.7E-06 48.4 13.7 68 143-210 196-267 (269)
79 COG2076 EmrE Membrane transpor 96.5 0.018 3.8E-07 44.6 7.7 55 318-372 49-104 (106)
80 PRK10452 multidrug efflux syst 96.3 0.022 4.7E-07 45.5 7.8 65 308-372 38-104 (120)
81 PRK10650 multidrug efflux syst 96.2 0.11 2.3E-06 40.8 11.1 53 318-370 54-107 (109)
82 PRK11431 multidrug efflux syst 96.2 0.086 1.9E-06 41.0 10.4 55 318-372 48-103 (105)
83 KOG4510 Permease of the drug/m 96.0 0.0027 5.9E-08 56.8 1.4 69 302-370 100-168 (346)
84 PF10639 UPF0546: Uncharacteri 95.9 0.024 5.1E-07 44.6 6.0 70 142-212 42-112 (113)
85 PF04657 DUF606: Protein of un 95.5 0.83 1.8E-05 37.5 13.8 116 93-211 17-138 (138)
86 KOG2234 Predicted UDP-galactos 95.4 0.56 1.2E-05 44.1 13.9 115 255-370 43-163 (345)
87 PRK13499 rhamnose-proton sympo 95.3 0.27 5.9E-06 46.7 11.7 135 221-371 6-153 (345)
88 TIGR00803 nst UDP-galactose tr 95.2 0.27 5.9E-06 43.7 11.2 62 150-211 160-221 (222)
89 PF00893 Multi_Drug_Res: Small 94.8 0.1 2.2E-06 39.7 6.1 54 309-362 38-93 (93)
90 PF05653 Mg_trans_NIPA: Magnes 94.5 0.28 6E-06 46.0 9.6 115 221-369 6-120 (300)
91 KOG2765 Predicted membrane pro 94.5 0.22 4.7E-06 47.1 8.5 141 72-217 246-393 (416)
92 KOG1441 Glucose-6-phosphate/ph 94.3 0.14 3.1E-06 48.0 7.1 134 79-214 165-307 (316)
93 COG3238 Uncharacterized protei 94.3 1.9 4.1E-05 35.8 12.8 140 221-373 4-148 (150)
94 COG5070 VRG4 Nucleotide-sugar 92.8 2.6 5.7E-05 37.2 11.7 126 81-207 159-289 (309)
95 KOG1581 UDP-galactose transpor 92.2 3.7 8E-05 38.0 12.3 118 93-211 188-310 (327)
96 PF10639 UPF0546: Uncharacteri 89.5 1.1 2.3E-05 35.4 5.6 50 319-368 61-111 (113)
97 PF07857 DUF1632: CEO family ( 89.2 0.6 1.3E-05 42.4 4.6 130 223-374 1-137 (254)
98 KOG1444 Nucleotide-sugar trans 88.7 4.3 9.3E-05 37.8 9.8 134 79-213 159-299 (314)
99 KOG4314 Predicted carbohydrate 86.5 0.66 1.4E-05 40.0 3.0 64 309-372 63-126 (290)
100 COG3238 Uncharacterized protei 86.4 18 0.00038 30.1 12.9 126 84-212 12-144 (150)
101 COG4975 GlcU Putative glucose 84.3 0.16 3.5E-06 45.2 -1.7 73 139-211 206-282 (288)
102 KOG1580 UDP-galactose transpor 80.2 6.6 0.00014 35.0 6.6 67 307-373 92-159 (337)
103 PF06379 RhaT: L-rhamnose-prot 68.0 93 0.002 29.6 11.4 24 221-244 6-29 (344)
104 PF06379 RhaT: L-rhamnose-prot 65.8 1.3E+02 0.0027 28.7 21.0 106 138-243 69-194 (344)
105 KOG4831 Unnamed protein [Funct 63.7 10 0.00023 29.2 3.5 69 143-212 54-123 (125)
106 PRK02237 hypothetical protein; 63.4 17 0.00036 28.3 4.6 45 327-371 61-105 (109)
107 PF02694 UPF0060: Uncharacteri 59.3 18 0.00039 28.0 4.1 45 327-371 59-103 (107)
108 KOG2766 Predicted membrane pro 57.5 3.1 6.8E-05 37.5 -0.2 67 303-369 82-148 (336)
109 KOG3912 Predicted integral mem 55.6 86 0.0019 29.0 8.4 53 318-370 105-157 (372)
110 KOG2922 Uncharacterized conser 50.9 9 0.0002 35.8 1.6 115 220-368 19-133 (335)
111 TIGR02865 spore_II_E stage II 46.5 4E+02 0.0087 28.6 14.3 43 170-212 12-54 (764)
112 COG3169 Uncharacterized protei 45.4 1.3E+02 0.0027 23.0 6.6 67 302-368 37-112 (116)
113 PF02694 UPF0060: Uncharacteri 40.9 50 0.0011 25.6 4.0 40 176-215 65-104 (107)
114 KOG1582 UDP-galactose transpor 40.5 2.4E+02 0.0053 26.1 8.8 50 168-217 286-335 (367)
115 PRK02237 hypothetical protein; 39.0 1.9E+02 0.0041 22.6 7.8 39 177-215 68-106 (109)
116 PF04342 DUF486: Protein of un 38.8 29 0.00064 26.8 2.5 28 340-367 77-104 (108)
117 PF11700 ATG22: Vacuole efflux 37.2 4.4E+02 0.0096 26.4 16.1 78 171-248 72-154 (477)
118 KOG4812 Golgi-associated prote 35.0 72 0.0016 28.6 4.6 19 350-368 218-236 (262)
119 COG1742 Uncharacterized conser 33.4 84 0.0018 24.3 4.1 44 328-371 61-104 (109)
120 KOG1442 GDP-fucose transporter 32.8 65 0.0014 29.7 4.0 108 94-202 202-315 (347)
121 PF04342 DUF486: Protein of un 32.7 2.4E+02 0.0051 21.9 9.8 60 153-212 46-106 (108)
122 COG1575 MenA 1,4-dihydroxy-2-n 32.3 3.4E+02 0.0074 25.4 8.8 50 198-247 20-69 (303)
123 KOG1443 Predicted integral mem 26.3 3.3E+02 0.0071 25.7 7.4 53 160-212 261-313 (349)
124 PF05297 Herpes_LMP1: Herpesvi 24.1 26 0.00055 32.2 0.0 75 169-243 50-131 (381)
125 PLN02776 prenyltransferase 24.0 6.4E+02 0.014 24.1 17.2 35 319-354 118-152 (341)
126 PRK15462 dipeptide/tripeptide 23.9 7.6E+02 0.016 24.9 12.8 41 172-212 311-360 (493)
127 TIGR00905 2A0302 transporter, 22.9 7.5E+02 0.016 24.5 17.4 20 354-373 417-436 (473)
128 COG1742 Uncharacterized conser 22.4 1E+02 0.0023 23.8 3.0 38 178-215 68-105 (109)
129 PF03303 WTF: WTF protein; In 21.0 6.1E+02 0.013 22.7 9.6 14 93-106 109-122 (247)
130 PF05961 Chordopox_A13L: Chord 20.2 87 0.0019 22.0 2.0 19 354-372 5-23 (68)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.2e-38 Score=303.87 Aligned_cols=296 Identities=12% Similarity=0.195 Sum_probs=248.0
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccC--HHHHHHHHHHHHH
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLN--WKLIKLWIPVNLI 151 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 151 (375)
...+....++.|+..|+..++.||++++ .+|+|++++++|++++.+++.+++..+..+.++.+ +++++.++|+|++
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLC 123 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4567778899999999999999999998 57889999999999998776665554444444443 4578899999999
Q ss_pred HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHH
Q 044951 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNC 231 (375)
Q Consensus 152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 231 (375)
+.......+.|++++++++++++|+++|+|+++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+
T Consensus 124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~ 203 (350)
T PTZ00343 124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN 203 (350)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHH
Confidence 88777778899999999999999999999999999999999999999999999999999999888889999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhh--HhHh-----cCcchhhHHHHHHHH
Q 044951 232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWR--YVMN-----TGVIELPMFWVAATA 304 (375)
Q Consensus 232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~-----~~~~~~~~~~~~l~~ 304 (375)
+++|+|+++.||.+++.+. +..++++.+...++.+.+.++.+|+....|+.. ...+ ...+.....+..++.
T Consensus 204 ~~~a~~~i~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 281 (350)
T PTZ00343 204 LGSSLRSIFAKKTMKNKSE--IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF 281 (350)
T ss_pred HHHHHHHHHHHHHhccccc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence 9999999999998865321 112466666777778888888888876554322 1110 111112233345667
Q ss_pred HhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951 305 SGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
+++..+..|.+.|.+++++||.++++.+++||++++++|+++|||++++.+++|.++++.|+++|++.|
T Consensus 282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 788888999999999999999999999999999999999999999999999999999999999999876
No 2
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-39 Score=291.54 Aligned_cols=294 Identities=40% Similarity=0.705 Sum_probs=270.5
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHH
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI 153 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (375)
.....+.+++.||.+|+.+.+.||+++++|+||..+++...|++.+.+.+..+...|..+.++++|+..|+|+|+++++.
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~ 88 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFV 88 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHH
Confidence 34556788999999999999999999999999887788889999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHHHH
Q 044951 154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCIL 233 (375)
Q Consensus 154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 233 (375)
++++++..+++|+|+++++++|+.+|+++++.+.+++|.++++..|.++..+.+|.......|.+++..|+.|++.+.++
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~ 168 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT 168 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-HhcCcchhhHHHHHHHHHhHHHHHH
Q 044951 234 TASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-MNTGVIELPMFWVAATASGFLGLAI 312 (375)
Q Consensus 234 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~ 312 (375)
.+.+.+..||..+. .+++.+++++|+++++.|.+....+++||+... .+++.|..+.+|..+..+|++++++
T Consensus 169 ~a~~~v~~kk~vd~-------~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~i 241 (314)
T KOG1444|consen 169 TAAFVVYVKKSVDS-------ANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGI 241 (314)
T ss_pred HHHHHHHHHHhhcc-------ccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHH
Confidence 99999999997654 468999999999999999999999999998832 3445677788889999999999999
Q ss_pred HHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 313 SFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 313 ~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
+|+.+++.+.+|++|.+++|......+.+.+.+++|+++++.+++|+.+.+.|.++|++.|.
T Consensus 242 sy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~ 303 (314)
T KOG1444|consen 242 SYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF 303 (314)
T ss_pred HHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence 99999999999999999999666666666666667899999999999999999999999874
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=303.42 Aligned_cols=295 Identities=19% Similarity=0.337 Sum_probs=260.4
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccC-HHHHHHHHHHHHHH
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLN-WKLIKLWIPVNLIF 152 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 152 (375)
+..........|+.++++..++||++++.++||+|++++..|..++.+.....+..+..+.++.+ +..++.++|+|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 45666777889999999999999999999999999999999999999999888888877666654 45789999999999
Q ss_pred HHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHHH
Q 044951 153 IGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCI 232 (375)
Q Consensus 153 ~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~ 232 (375)
++..+++|.|++++|+|++|++|+++|++++++++++.+|+++++.++++.+++.||.+++.+|.++|+.|++.++++.+
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHH-HHHHHhhhhhHh-HhcCcchhhHHHHHHHHHhHHHH
Q 044951 233 LTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAM-FLILIFDEWRYV-MNTGVIELPMFWVAATASGFLGL 310 (375)
Q Consensus 233 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~ 310 (375)
..++++++.|+.+++. ..++|+.++++|+.+++...++ |+....++.... .....|.. .++.. ++..++++
T Consensus 174 ~~al~~I~~~~ll~~~-----~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~sv~~f 246 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSK-----GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFV-TFLIL-LLNSVLAF 246 (316)
T ss_pred HHHHHHHHHHHhhhcc-----ccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccch-hhHHH-HHHHHHHH
Confidence 9999999999998642 3579999999999999999998 776654443320 01112222 23333 44449999
Q ss_pred HHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcccC
Q 044951 311 AISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS 375 (375)
Q Consensus 311 ~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~~ 375 (375)
.+|.+.|++++++||+|+++.|++|.++.++.||++|+++.++.|..|++++++|+++|++.|.|
T Consensus 247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~ 311 (316)
T KOG1441|consen 247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK 311 (316)
T ss_pred HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999998864
No 4
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.9e-37 Score=291.03 Aligned_cols=289 Identities=15% Similarity=0.206 Sum_probs=241.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHH
Q 044951 78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLV 157 (375)
Q Consensus 78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (375)
.....+.|+..|++++++||++++ +|++|++++++|+.++.+.+.+.+..+..+.++.++++++.+++.|+++++++.
T Consensus 3 ~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 3 TGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999998 578899999999999988777664434345566788999999999999999999
Q ss_pred HHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHHHHHHHH
Q 044951 158 SGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASY 237 (375)
Q Consensus 158 ~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~ 237 (375)
++|.+++++++++++++++++|+++++++++++|||++++++++++++++|+++...+|.+++..|+++++++++++|+|
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~ 160 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR 160 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777778888999999999999999
Q ss_pred HHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhH-hcCc----chhhHHHHHHHHHhH-HHHH
Q 044951 238 SLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVM-NTGV----IELPMFWVAATASGF-LGLA 311 (375)
Q Consensus 238 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~~~-~~~~ 311 (375)
.++.||.+++ .++++.++..|+...+.+.++|.....++..... +... ......+...+..++ ....
T Consensus 161 ~v~~k~~~~~-------~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
T TIGR00817 161 NIFSKKAMTI-------KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF 233 (302)
T ss_pred HHHHHHhhcc-------CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence 9999997652 1478899999999999988888876655433211 1101 111122332334443 2333
Q ss_pred HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcccC
Q 044951 312 ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS 375 (375)
Q Consensus 312 ~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~~ 375 (375)
.++..+..++++||+++++.+++||++++++|++++||+++..+++|.++++.|+.+|++.|.|
T Consensus 234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 4556668999999999999999999999999999999999999999999999999999988753
No 5
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.97 E-value=2.8e-31 Score=224.95 Aligned_cols=285 Identities=34% Similarity=0.613 Sum_probs=251.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHH
Q 044951 78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLV 157 (375)
Q Consensus 78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (375)
...+++.||.+|+.+.+.||++++..+|+..+.+.++|.+++...+.+++..|..+.+ ..+.|.|+|.+++...+++
T Consensus 7 ~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIy 83 (309)
T COG5070 7 ELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIY 83 (309)
T ss_pred cchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHH
Confidence 3567889999999999999999999999988999999999988888887777655443 4568899999999999999
Q ss_pred HHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc--------ccchhhHHHHHH
Q 044951 158 SGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL--------SFDTKGYAWQIV 229 (375)
Q Consensus 158 ~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~ 229 (375)
.+..+++|++++.|++.|+++.+.++..+..++|.|.+..+..+.+++++..+...++|. .++ .|++|+..
T Consensus 84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~ 162 (309)
T COG5070 84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFT 162 (309)
T ss_pred hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEeh
Confidence 999999999999999999999999999999999999999999999999999999999886 344 69999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHH
Q 044951 230 NCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLG 309 (375)
Q Consensus 230 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 309 (375)
+++..|.|....||..+- .+...++.+||+++.+.|.++.+++++|||....-...+. +.....+..+|+++
T Consensus 163 NclssaafVL~mrkri~l-------tNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~-~d~l~am~ISgl~s 234 (309)
T COG5070 163 NCLSSAAFVLIMRKRIKL-------TNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLCS 234 (309)
T ss_pred hhHhHHHHHHHHHHhhcc-------cccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC-hHHHHHHHHHHHHH
Confidence 999999999998886553 2355678999999999999999999999987642112221 11134678899999
Q ss_pred HHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 310 LAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 310 ~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
+.+.|++-|+++.+|+++++++|.+++....+.|.++||++.+...+..+.+...+.+.|.+.|.
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks 299 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS 299 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998764
No 6
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=1.2e-32 Score=239.94 Aligned_cols=292 Identities=18% Similarity=0.300 Sum_probs=258.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhc--cCCChhHHHHHHHHHHHHHHHHHHHhh-----CCccccc--cCHHHHHHHH
Q 044951 76 SGPLISGTAYCISSCSMTLLNKVVLST--YNFNAGISLMFYQNLISTLVVAVFGFF-----GAVSVEK--LNWKLIKLWI 146 (375)
Q Consensus 76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~--~~f~~p~~l~~~q~~~~~l~l~~~~~~-----~~~~~~~--~~~~~~~~~~ 146 (375)
.........|..+|+++.+.||++++. ...+.|.+.++.|++++..++..+... +..+.++ ++.+..+.++
T Consensus 27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl 106 (347)
T KOG1442|consen 27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL 106 (347)
T ss_pred hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence 334455667888999999999999997 456789999999999998888776543 2223333 4567888999
Q ss_pred HHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc---cccchhh
Q 044951 147 PVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD---LSFDTKG 223 (375)
Q Consensus 147 ~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G 223 (375)
|+++.+.+++.+.|.+++|+++++|.+-|+++.+|+.++.++++|||-+.....++.+++.|-.+.+-.| ..+++.|
T Consensus 107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G 186 (347)
T KOG1442|consen 107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG 186 (347)
T ss_pred chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence 9999999999999999999999999999999999999999999999999999999988888866655444 4677999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951 224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT 303 (375)
Q Consensus 224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (375)
.++++.|+++.|+..+..||.....+ ---|.+.+|+|..+....+|+.++.+|.+.+.++++.....||..+.
T Consensus 187 vifGVlaSl~vAlnaiytkk~l~~v~-------~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt 259 (347)
T KOG1442|consen 187 VIFGVLASLAVALNAIYTKKVLPPVG-------DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT 259 (347)
T ss_pred hHHHHHHHHHHHHHHHhhheeccccc-------CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence 99999999999999999998766432 34789999999999999999999999999998888888889999999
Q ss_pred HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
.+|+++|.++|.+.+-+|.+||.|+.+.++-|....+++++.+++|..+..-|.|-+++++|..+|.+.|.
T Consensus 260 LsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 260 LSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=3.4e-28 Score=228.18 Aligned_cols=274 Identities=19% Similarity=0.260 Sum_probs=229.1
Q ss_pred HHHHHHHHhhc-cCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhH
Q 044951 92 MTLLNKVVLST-YNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAM 170 (375)
Q Consensus 92 ~~~~nK~~l~~-~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~ 170 (375)
..++.+.+... ++.++|.++++.|+++..+.......... .++.++..++.+.+.++++.+...++|.|++|+|+++
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 34555555554 33347999999999998887766544432 2233445577889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc----ccc------hhhHHHHHHHHHHHHHHHHH
Q 044951 171 VTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL----SFD------TKGYAWQIVNCILTASYSLT 240 (375)
Q Consensus 171 ~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~----~~~------~~G~~~~l~s~~~~a~~~i~ 240 (375)
.++.|++.|+++++++.+++|||++++++++++++++|+++...+|. +.+ ..|+++.+.+.++.|.+.++
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~ 172 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY 172 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999877542 111 23999999999999999999
Q ss_pred HHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHH--hhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHH
Q 044951 241 LRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILI--FDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMW 318 (375)
Q Consensus 241 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (375)
.+|.+++++ .+++++++|+++++.+..++.... .+|+.+..++.. .+|..+..++..++++.......+.
T Consensus 173 qe~~~~~~~-------~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~~i~~ 244 (303)
T PF08449_consen 173 QEKLFKKYG-------KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQFFIFY 244 (303)
T ss_pred HHHHHHHhC-------CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988754 678999999999999999887777 566655443322 3444566777888888888888888
Q ss_pred HhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcccC
Q 044951 319 FLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS 375 (375)
Q Consensus 319 ~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~~ 375 (375)
.+++.||++.+++.+++++.++++++++||+++++.+++|+++++.|..+|++.|+|
T Consensus 245 ~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k 301 (303)
T PF08449_consen 245 LIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK 301 (303)
T ss_pred HHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999998864
No 8
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=1.1e-29 Score=225.26 Aligned_cols=289 Identities=14% Similarity=0.174 Sum_probs=244.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhC----CccccccCHH-HHHHHHHHHHH
Q 044951 77 GPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFG----AVSVEKLNWK-LIKLWIPVNLI 151 (375)
Q Consensus 77 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~ 151 (375)
..+..+.+|+.+|+++..++|+.-. +|++|++++..|+++-.++....+... .+++...+|+ ++++..|+++.
T Consensus 16 ~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 16 LTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 3344558999999999999998865 678889999999988777665544331 1123345554 78888999999
Q ss_pred HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHH
Q 044951 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNC 231 (375)
Q Consensus 152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 231 (375)
.+++++++|+|++|+++++|||.|+++++|+.+++.++.-||++|...+.++++.+|+++.++.+.+++..|+.+.++++
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS 173 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS 173 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-----HhcCcch-hhHHHHHHHHH
Q 044951 232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-----MNTGVIE-LPMFWVAATAS 305 (375)
Q Consensus 232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~-~~~~~~~l~~~ 305 (375)
++.+++..+.+.++++.+ ..+-||..+.++..+.+...++|..+.+|+.... ..+.+.. .......+...
T Consensus 174 ~~sGlRW~~tQ~ll~~~~----~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~ 249 (349)
T KOG1443|consen 174 LLSGLRWAFTQMLLRNQP----SAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG 249 (349)
T ss_pred HhhhhhHHHHHHHHhcCc----cccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH
Confidence 999999999999887643 3567999999999999999999988877764332 1111111 11223466778
Q ss_pred hHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 306 GFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 306 ~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
|..++++.++.|..+.++|..|.++.|.+|.+.+.++|.++.+|.++..++.|..+++.|+..|..
T Consensus 250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 889999999999999999999999999999999999999999999999999999999999999943
No 9
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=8.8e-26 Score=214.80 Aligned_cols=279 Identities=15% Similarity=0.177 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCC--ccccccCHHHHHHHHHHHHHHHHHHHHH
Q 044951 82 GTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGA--VSVEKLNWKLIKLWIPVNLIFIGMLVSG 159 (375)
Q Consensus 82 ~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (375)
.++--....++..+.|..++. +.+ |..+.++|+.++.+++.++...+. .+.++.+++++..+...|++..++..+.
T Consensus 18 ~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~ 95 (358)
T PLN00411 18 MLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITG 95 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444446788999964 788 888999999999888776543321 2233445677777777777666677789
Q ss_pred hHhhcccchhHHHHHHHHHHHHHHHHHHHH------hcccccHHHHHHHHHHHHHhHhhccc-cc---------------
Q 044951 160 MYSLKYINIAMVTILKNMTNILTAVGELYM------FRKRQNQKVWTAMFLMIISAVSGSIT-DL--------------- 217 (375)
Q Consensus 160 ~~al~~~~vs~~~il~~~~pvfv~l~~~~~------~~~~~~~~~~~~l~l~~~Gv~l~~~~-~~--------------- 217 (375)
+.+++|++++.+.++.++.|++++++++++ +|||++++++++++++++|+.++... +.
T Consensus 96 ~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~ 175 (358)
T PLN00411 96 YIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQ 175 (358)
T ss_pred HHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccc
Confidence 999999999999999999999999999999 69999999999999999999986542 11
Q ss_pred --------ccc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCc-hhHHHHHhhhHHHHHHHHHHHhhhhhHh
Q 044951 218 --------SFD-TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNE-VSMVLLNNLLSLPFAMFLILIFDEWRYV 287 (375)
Q Consensus 218 --------~~~-~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (375)
..+ ..|..+.++++++||+|.++.||..++ .++ ....+++..++.....+.....++.+..
T Consensus 176 ~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~---------~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~ 246 (358)
T PLN00411 176 LSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE---------YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246 (358)
T ss_pred cccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 012 349999999999999999999998764 333 2444454444444433333333321100
Q ss_pred HhcCcchhhHHHHHHHHHhHHHHHHHHH-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhh
Q 044951 288 MNTGVIELPMFWVAATASGFLGLAISFT-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAG 366 (375)
Q Consensus 288 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~ 366 (375)
.....++ ... ..+++.+++.. +.|. .++++++.+|.++++..+++|++++++|++++||++++.+++|.++++.|+
T Consensus 247 ~~~~~~~-~~~-~~i~y~~i~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv 323 (358)
T PLN00411 247 VWIIHFD-ITL-ITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF 323 (358)
T ss_pred cceeccc-hHH-HHHHHHHHHHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 0011121 222 24566666654 4444 448999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhccc
Q 044951 367 IFFARAKM 374 (375)
Q Consensus 367 ~ly~~~k~ 374 (375)
++..+.|+
T Consensus 324 ~l~~~~~~ 331 (358)
T PLN00411 324 YAVMWGKA 331 (358)
T ss_pred HHHHhhhh
Confidence 99876654
No 10
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=4.5e-25 Score=206.06 Aligned_cols=271 Identities=12% Similarity=0.045 Sum_probs=209.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHH-HHHHH
Q 044951 79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIF-IGMLV 157 (375)
Q Consensus 79 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 157 (375)
+...++|+.. ....|...+ +.+ |..++++|++++.+++.++...+..+ ..++++++.....|.+. .....
T Consensus 14 ~~~~~iWg~~----~~~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 14 FALYIIWGST----YLVIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHhhH----HHHHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHH
Confidence 4456688877 556698887 567 89999999999988876654443222 23466677777777654 56677
Q ss_pred HHhHhh-cccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc-ccccchhhHHHHHHHHHHHH
Q 044951 158 SGMYSL-KYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT-DLSFDTKGYAWQIVNCILTA 235 (375)
Q Consensus 158 ~~~~al-~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a 235 (375)
+.+.+. ++++++.++++.++.|+++++++.+ +|||++++++.+++++++|+.++..+ +.+.+..|.++++++++++|
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a 163 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWA 163 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHH
Confidence 778888 9999999999999999999999975 79999999999999999999988644 33455679999999999999
Q ss_pred HHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHH
Q 044951 236 SYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFT 315 (375)
Q Consensus 236 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 315 (375)
.|.+..||..+ -++.....++...+.+.+.+.....++... ...+...|..+++.++++....+.
T Consensus 164 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~i~~s~~~~~ 228 (292)
T PRK11272 164 FGSVWSSRLPL----------PVGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLALGYLAVFGSIIAIS 228 (292)
T ss_pred HHHHHHHhcCC----------CcchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999988532 123344556666666666555443322111 111234567788888888777776
Q ss_pred HH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 316 SM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 316 ~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
.+ +.+++.++.+.++..+++|+.++++|++++||++++.+++|.++++.|+++.++.+.
T Consensus 229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 65 799999999999999999999999999999999999999999999999998776543
No 11
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=7.7e-25 Score=204.72 Aligned_cols=265 Identities=11% Similarity=0.035 Sum_probs=192.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHH
Q 044951 75 KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIG 154 (375)
Q Consensus 75 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (375)
....+.++++|+.. ....|..++ ++| |..+.++|+.++.+++..+.. . ++.+++.++..+..++.+..
T Consensus 6 ~l~~l~a~~~Wg~~----~~~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~~--~---~~~~~~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 6 TLIGLIAILLWSTM----VGLIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTVG--F---PRLRQFPKRYLLAGGLLFVS 73 (295)
T ss_pred hHHHHHHHHHHHHH----HHHHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHcc--c---cccccccHHHHHHHhHHHHH
Confidence 45566788899988 557799887 578 999999999999888765431 1 11122223334444455566
Q ss_pred HHHHHhHhhc----ccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc-----------cc
Q 044951 155 MLVSGMYSLK----YINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-----------SF 219 (375)
Q Consensus 155 ~~~~~~~al~----~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-----------~~ 219 (375)
+..+.+.+++ .++.+.+.++.++.|+++++++++++|||++++++++++++++|++++...+. ..
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 153 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIAS 153 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcccc
Confidence 6666666664 46778888999999999999999999999999999999999999998865432 12
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951 220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW 299 (375)
Q Consensus 220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
+..|+++++.++++||.|.++.||..++ .++....+ ..+...+.+.....+++. ..+ ++..|
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~---------~~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~-~~~~~ 215 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARG---------KNGITLFF---ILTALALWIKYFLSPQPA-----MVF-SLPAI 215 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCC---------CCchhHHH---HHHHHHHHHHHHHhcCcc-----ccC-CHHHH
Confidence 3469999999999999999999997432 44444322 122222222222222211 112 22345
Q ss_pred HHHHHHhHHHHHHHHH-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 300 VAATASGFLGLAISFT-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 300 ~~l~~~~~~~~~~~~~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
..+++.++. ..+.|. .++.+++.+|.+.++..+++|++++++|++++||++++.+++|.++++.|+++..
T Consensus 216 ~~l~~~~~~-t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 216 IKLLLAAAA-MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 556666654 444444 4589999999999999999999999999999999999999999999999986643
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=4.1e-24 Score=200.29 Aligned_cols=274 Identities=12% Similarity=0.104 Sum_probs=199.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHH-HH
Q 044951 76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIF-IG 154 (375)
Q Consensus 76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 154 (375)
...+...++|+... ...|..++ +++ |..+.++|+.++.+.+...... ++.++ +..+..++.. ..
T Consensus 7 l~~l~~~~~Wg~~~----~~~k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~~-----~~~~~---~~~~~~g~~~~~~ 71 (299)
T PRK11453 7 VLALLVVVVWGLNF----VVIKVGLH--NMP-PLMLAGLRFMLVAFPAIFFVAR-----PKVPL---NLLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHHHHhhhH----HHHHHHHh--cCC-HHHHHHHHHHHHHHHHHHHhcC-----CCCch---HHHHHHHHHHHHH
Confidence 34566777899884 56698887 577 9999999999876655443221 11122 2344445433 34
Q ss_pred HHHHHhHhhcc-cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc---cccchhhHHHHHHH
Q 044951 155 MLVSGMYSLKY-INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD---LSFDTKGYAWQIVN 230 (375)
Q Consensus 155 ~~~~~~~al~~-~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s 230 (375)
...+.+.++++ ++++.+.++.++.|+++.+++++++|||+++++++++++.++|+.++...+ .+.+..|+.+++.+
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~a 151 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAA 151 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHH
Confidence 44566778887 689999999999999999999999999999999999999999999887542 23345799999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-HhcCcchhhHHHHHHHHHhHHH
Q 044951 231 CILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-MNTGVIELPMFWVAATASGFLG 309 (375)
Q Consensus 231 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~ 309 (375)
++++|+|.++.||..++. ..........++...+...........++.... .....+ ++..|..+++.|+++
T Consensus 152 al~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~i~~ 224 (299)
T PRK11453 152 AFSWACGNIFNKKIMSHS------TRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYLAFVA 224 (299)
T ss_pred HHHHHHHHHHHHHHhccc------CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC-CHHHHHHHHHHHHHH
Confidence 999999999999975421 112222333444433332222222222322111 011122 344577889999999
Q ss_pred HHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 310 LAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 310 ~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
....|..+ +.+++.++.+.++...++|++++++|++++||+++..+++|.++++.|+++-.+
T Consensus 225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 98888876 789999999999999999999999999999999999999999999999987544
No 13
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=3.1e-24 Score=197.03 Aligned_cols=250 Identities=16% Similarity=0.124 Sum_probs=196.9
Q ss_pred HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHH-HHHHHHHHHHhHhhcccchhHH
Q 044951 93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVN-LIFIGMLVSGMYSLKYINIAMV 171 (375)
Q Consensus 93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~vs~~ 171 (375)
....|+.+++ ..| |..+.+.|++.+.+++.+....+ .++++++.....+ +...++..+.+.|++++|++.+
T Consensus 5 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 76 (260)
T TIGR00950 5 GVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA 76 (260)
T ss_pred HHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence 4567999874 345 88899999998887776554333 1344444455555 5568889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 044951 172 TILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT-DLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQ 250 (375)
Q Consensus 172 ~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~ 250 (375)
+++.++.|+++++++.+++|||++++++.++.++++|+.++... +.+.+..|+.+++.++++++.+.+..||..++
T Consensus 77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~--- 153 (260)
T TIGR00950 77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK--- 153 (260)
T ss_pred HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc---
Confidence 99999999999999999999999999999999999999987654 34455789999999999999999999998653
Q ss_pred hccCCCCCc--hhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHH-HHhhccCchh
Q 044951 251 ATRSGSLNE--VSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSM-WFLQQTGPTT 327 (375)
Q Consensus 251 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~~~s~~t 327 (375)
.++ .....+....+.+..++.....++.. .. +...|..+++.++++..+.+..+ +.+++.++.+
T Consensus 154 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 220 (260)
T TIGR00950 154 ------EGPELLQFTGWVLLLGALLLLPFAWFLGPNP------QA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSA 220 (260)
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 343 33333456666666666554433211 11 23345567778888776666654 7999999999
Q ss_pred HhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhh
Q 044951 328 YSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAG 366 (375)
Q Consensus 328 ~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~ 366 (375)
.++..+++|+++++++++++||++++.+++|..+++.|+
T Consensus 221 ~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 221 ASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999886
No 14
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=1.6e-23 Score=195.59 Aligned_cols=267 Identities=12% Similarity=0.018 Sum_probs=202.7
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHH
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI 153 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (375)
+....+.+.++|+..+ ...|+.++ ++| |..+.++|++++.+++.++...+ .++.++++++..+..|+++.
T Consensus 13 ~~~~~~la~~~~~~~~----~~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~---~~~~~~~~~~~~~~~g~~~~ 82 (293)
T PRK10532 13 PILLLLIAMASIQSGA----SLAKSLFP--LVG-APGVTALRLALGTLILIAIFKPW---RLRFAKEQRLPLLFYGVSLG 82 (293)
T ss_pred HHHHHHHHHHHHHhhH----HHHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHH---hccCCHHHHHHHHHHHHHHH
Confidence 3455566777777664 46799998 577 88899999999988876654322 12345677777778888888
Q ss_pred HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc---ccccchhhHHHHHHH
Q 044951 154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---DLSFDTKGYAWQIVN 230 (375)
Q Consensus 154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~~~~~~~G~~~~l~s 230 (375)
..+.+.+++++++|++.++++..+.|+++++++ +|++... ..+.++++|+.++... ..+.+..|.++++++
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~a 156 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGA 156 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHH
Confidence 888899999999999999999999999999876 3566544 4466779999886532 223456799999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHH
Q 044951 231 CILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGL 310 (375)
Q Consensus 231 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 310 (375)
++++|+|.+..||..++ .++.... +...++...+.++....++ . ..+ ++..|..+++.|+++.
T Consensus 157 a~~~a~~~v~~r~~~~~---------~~~~~~~-~~~~~~~~~l~~~~~~~~~--~----~~~-~~~~~~~~l~lgv~~t 219 (293)
T PRK10532 157 GACWAIYILSGQRAGAE---------HGPATVA-IGSLIAALIFVPIGALQAG--E----ALW-HWSILPLGLAVAILST 219 (293)
T ss_pred HHHHHHHHHHHHHHhcc---------CCchHHH-HHHHHHHHHHHHHHHHccC--c----ccC-CHHHHHHHHHHHHHHH
Confidence 99999999999998543 4454443 4445555555554443221 0 011 2233455678889988
Q ss_pred HHHHHH-HHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951 311 AISFTS-MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 311 ~~~~~~-~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
.+.|.. ++.+++.+|.++++..+++|++++++|++++||+++..+++|.++++.|++.+.+..
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 888866 489999999999999999999999999999999999999999999999999986543
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.93 E-value=1.1e-22 Score=190.29 Aligned_cols=272 Identities=11% Similarity=0.038 Sum_probs=187.7
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCC-ccc-c-cc-CHHHHHHHHHH
Q 044951 73 AVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGA-VSV-E-KL-NWKLIKLWIPV 148 (375)
Q Consensus 73 ~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~-~~~-~-~~-~~~~~~~~~~~ 148 (375)
++....+++.++|+... ...|.. . +.+ |..+.++|++++.+++......+. .+. . +. +++.+......
T Consensus 8 ~g~~~~l~a~~~wg~~~----~~~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (296)
T PRK15430 8 QGVLLALAAYFIWGIAP----AYFKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS 79 (296)
T ss_pred hHHHHHHHHHHHHHHHH----HHHHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence 45566677888898885 455875 3 567 899999999998876654432221 110 0 01 23333333344
Q ss_pred HHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHH
Q 044951 149 NLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQI 228 (375)
Q Consensus 149 ~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l 228 (375)
++....++.+.+++++++|++.++++.++.|+++++++++++|||++++++++++++++|++++...+.+. ..+++
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l 155 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIAL 155 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHH
Confidence 56678889999999999999999999999999999999999999999999999999999999876432222 25788
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHH
Q 044951 229 VNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFL 308 (375)
Q Consensus 229 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 308 (375)
+++++||+|.+..||..++ ...+......+..+++.+...+. .++... .... .....+..+...|+.
T Consensus 156 ~aa~~~a~~~i~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~-~~~~~~~~~~~~g~~ 222 (296)
T PRK15430 156 GLAFSFAFYGLVRKKIAVE-------AQTGMLIETMWLLPVAAIYLFAI---ADSSTS--HMGQ-NPMSLNLLLIAAGIV 222 (296)
T ss_pred HHHHHHHHHHHHHHhcCCC-------CchhHHHHHHHHHHHHHHHHHHH---ccCCcc--cccC-CcHHHHHHHHHHHHH
Confidence 8999999999988875321 01122222233322222221111 111000 0001 111123344555555
Q ss_pred HHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 309 GLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 309 ~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
+....+..++.+++.+|.+.++..+++|++++++|++++||++++.+++|+++++.|+.+.
T Consensus 223 t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~ 283 (296)
T PRK15430 223 TTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF 283 (296)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 4444444558999999999999999999999999999999999999999999998887664
No 16
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.88 E-value=2.8e-20 Score=173.78 Aligned_cols=267 Identities=12% Similarity=0.113 Sum_probs=197.6
Q ss_pred HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhC--CccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhH
Q 044951 93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFG--AVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAM 170 (375)
Q Consensus 93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~ 170 (375)
...+..+-++ +++.|.+-+++-++.-.++.......+ ..+..+.-++.+++++.++++-...+++.+.|++|++++.
T Consensus 29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS 107 (334)
T PF06027_consen 29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS 107 (334)
T ss_pred HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence 3444555444 677787666665554333332222222 1122222334566778889988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc---------ccchhhHHHHHHHHHHHHHHHHHH
Q 044951 171 VTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL---------SFDTKGYAWQIVNCILTASYSLTL 241 (375)
Q Consensus 171 ~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~ 241 (375)
++++.+++.+++++++++++|+|+++.+++++++.++|++++...|. +-...|++++++++++||+++++.
T Consensus 108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~ 187 (334)
T PF06027_consen 108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE 187 (334)
T ss_pred HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998876542 224789999999999999999999
Q ss_pred HHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHH-HHh
Q 044951 242 RRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSM-WFL 320 (375)
Q Consensus 242 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l 320 (375)
++..++ .+..+......+++.++..+..... |+....+. +|+... +.. .....++....|+.. ..+
T Consensus 188 E~~v~~---------~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~-~w~~~~-~~~-~v~~~~~lf~~y~l~p~~l 254 (334)
T PF06027_consen 188 EKLVKK---------APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESI-HWTSQV-IGL-LVGYALCLFLFYSLVPIVL 254 (334)
T ss_pred HHhccc---------CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhcc-CCChhh-HHH-HHHHHHHHHHHHHHHHHHH
Confidence 998764 4566777777788877777665544 44443222 343222 222 222223333444433 578
Q ss_pred hccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951 321 QQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 321 ~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
+.+||+...+.-....+.++++++++||+++++..++|.++++.|.++|+...
T Consensus 255 ~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 255 RMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 99999999998888999999999999999999999999999999999998753
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.87 E-value=7e-20 Score=170.15 Aligned_cols=271 Identities=11% Similarity=0.158 Sum_probs=180.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhC--CccccccCHHHHHHHHHHHHHHHHH
Q 044951 78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFG--AVSVEKLNWKLIKLWIPVNLIFIGM 155 (375)
Q Consensus 78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (375)
++.+...|... ....|...++ .++ .++++.....+++.++...+ ..+.++.+++.+......++.....
T Consensus 6 ~~~aa~~~a~~----~~~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (281)
T TIGR03340 6 VVFSALMHAGW----NLMAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVY 76 (281)
T ss_pred HHHHHHHHHHH----HHHHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHH
Confidence 34455556555 5567866553 223 24555555555554433322 1222333444454455556677888
Q ss_pred HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc-cccchhhHHHHHHHHHHH
Q 044951 156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD-LSFDTKGYAWQIVNCILT 234 (375)
Q Consensus 156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~ 234 (375)
..+.+.++++.|++..+.+.++.|+++.+++++++|||+++++++++++++.|+.++...+ ...+..|+.+++++++++
T Consensus 77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~ 156 (281)
T TIGR03340 77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGT 156 (281)
T ss_pred HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876543 234457889999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHH
Q 044951 235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISF 314 (375)
Q Consensus 235 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (375)
++|.+..|+..++.+ ...+......+..... ..+........... . ....... +..+++.+.+...+.|
T Consensus 157 a~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~s~l~~ 225 (281)
T TIGR03340 157 AIYSLSDKAAALGVP-----AFYSALGYLGIGFLAM---GWPFLLLYLKRHGR-S-MFPYARQ-ILPSATLGGLMIGGAY 225 (281)
T ss_pred HHhhhhccccccchh-----cccccHHHHHHHHHHH---HHHHHHHHHHHhcc-c-hhhhHHH-HHHHHHHHHHHHHHHH
Confidence 999998887533211 0011111222221111 12222111000000 0 0011112 2344455555555555
Q ss_pred H-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951 315 T-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 315 ~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l 368 (375)
. .++.+++.++.+.+...+++|++++++|++++||+++..+++|.++++.|+++
T Consensus 226 ~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 226 ALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 4 45799999999999999999999999999999999999999999999999875
No 18
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=3.3e-21 Score=165.12 Aligned_cols=254 Identities=16% Similarity=0.151 Sum_probs=206.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHH
Q 044951 105 FNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAV 184 (375)
Q Consensus 105 f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l 184 (375)
|.+.+.+.++|+.+..+..-++..++ +..+.++-.-+.+..+++-|.+..+.+|.|++++|.++..+-|++.|+-+|+
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 67778899999998887765544333 2233343345678889999999999999999999999999999999999999
Q ss_pred HHHHHhcccccHHHHHHHHHHHHHhHhhccccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCC
Q 044951 185 GELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-------SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSL 257 (375)
Q Consensus 185 ~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~ 257 (375)
++.++.+++++|+++++++++++||++..+.+. +....|-++.++|.-..++-.....|+...+ .-
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-------q~ 200 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-------QR 200 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-------cc
Confidence 999999999999999999999999999877522 2235788999999999988888877765432 23
Q ss_pred CchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhH
Q 044951 258 NEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKI 337 (375)
Q Consensus 258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v 337 (375)
+.-++++++|+.+...+..-.+++||..+...+. -++|..|.-+...++.+.+-+...|..+...+|.+.|++.+.++.
T Consensus 201 ~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKf 279 (337)
T KOG1580|consen 201 TGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKF 279 (337)
T ss_pred CchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHH
Confidence 4568999999999988877777788754433332 234555556777777777778888888999999999999999999
Q ss_pred HHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951 338 PISLAGLVLFNVPLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 338 ~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l 368 (375)
++++.++++|+++++..||+|.++++.|...
T Consensus 280 FTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 280 FTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999988754
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.86 E-value=4.9e-19 Score=162.29 Aligned_cols=246 Identities=11% Similarity=0.102 Sum_probs=168.2
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHH-hhCCc-----cccccCHH-HHHHHH
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFG-FFGAV-----SVEKLNWK-LIKLWI 146 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~-~~~~~-----~~~~~~~~-~~~~~~ 146 (375)
+....+.+.++|+.. ....|+ .. +.+ |..+.++|++++.+++.+.. ..+.. +.++.+++ .+....
T Consensus 3 g~~~~i~a~~~wg~~----~~~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (256)
T TIGR00688 3 GIIVSLLASFLFGYM----YYYSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL 74 (256)
T ss_pred cHHHHHHHHHHHHHH----HHHHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence 445566778889888 456697 44 467 89999999999887765433 22211 11111222 233456
Q ss_pred HHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHH
Q 044951 147 PVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAW 226 (375)
Q Consensus 147 ~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~ 226 (375)
..+++...+..+.++|+++++++.++++.++.|+++++++++++|||++++++++++++++|++++...+.+.+ .+
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~ 150 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WE 150 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HH
Confidence 66777889999999999999999999999999999999999999999999999999999999998754322221 46
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHh
Q 044951 227 QIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASG 306 (375)
Q Consensus 227 ~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 306 (375)
++++++++|.|.+..||..++ +..+... ......+...+... .+++... +.......|..+++.|
T Consensus 151 ~l~aa~~~a~~~i~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~l~~~g 215 (256)
T TIGR00688 151 ALVLAFSFTAYGLIRKALKNT----------DLAGFCL-ETLSLMPVAIYYLL-QTDFATV---QQTNPFPIWLLLVLAG 215 (256)
T ss_pred HHHHHHHHHHHHHHHhhcCCC----------CcchHHH-HHHHHHHHHHHHHH-HhccCcc---cccCchhHHHHHHHHH
Confidence 789999999999998885321 1122221 11222222222211 1122111 0111112356666777
Q ss_pred HHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhh
Q 044951 307 FLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVL 346 (375)
Q Consensus 307 ~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~ 346 (375)
+++....+...+.+++.++.+.++..+++|++++++|+++
T Consensus 216 ~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 216 LITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 7644434444589999999999999999999999999764
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.85 E-value=6e-18 Score=157.21 Aligned_cols=272 Identities=15% Similarity=0.232 Sum_probs=192.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHH
Q 044951 79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVS 158 (375)
Q Consensus 79 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (375)
++..+.|+.. ....|....+ ...+....+.|...+.+........+.....+..++.++..+..++.......+
T Consensus 13 l~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (292)
T COG0697 13 LLWGLLWGLS----FIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLL 86 (292)
T ss_pred HHHHHHHHHH----HHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3444455555 4455666552 232555666688887777443333321111221222234455555677888999
Q ss_pred HhHhhcccchhHHHHHHHHHHHHHHHHHH-HHhcccccHHHHHHHHHHHHHhHhhccccccc---chhhHHHHHHHHHHH
Q 044951 159 GMYSLKYINIAMVTILKNMTNILTAVGEL-YMFRKRQNQKVWTAMFLMIISAVSGSITDLSF---DTKGYAWQIVNCILT 234 (375)
Q Consensus 159 ~~~al~~~~vs~~~il~~~~pvfv~l~~~-~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~---~~~G~~~~l~s~~~~ 234 (375)
.+.++++++++.++++.++.|+++.+++. +++|||++++++.++++.+.|+.++...+... ...|..+++++++++
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~ 166 (292)
T COG0697 87 LFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLW 166 (292)
T ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 66799999999999999999999998865433 258999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCCCCCchhHHH-HHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHH
Q 044951 235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVL-LNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAIS 313 (375)
Q Consensus 235 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 313 (375)
|++.+..|+.. + .++....+ +... ............+.. .......|..+.+.|+++..+.
T Consensus 167 a~~~~~~~~~~-~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~i~ 228 (292)
T COG0697 167 ALYTALVKRLS-R---------LGPVTLALLLQLL--LALLLLLLFFLSGFG------APILSRAWLLLLYLGVFSTGLA 228 (292)
T ss_pred HHHHHHHHHhc-C---------CChHHHHHHHHHH--HHHHHHHHHHhcccc------ccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999875 2 34444444 2222 111111111111111 0112233567777888877655
Q ss_pred HHH-HHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 314 FTS-MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 314 ~~~-~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
+.. ++.+++.++...++....+|+.+++.+++++||+++..+++|.++++.|+.+....++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 290 (292)
T COG0697 229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290 (292)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence 554 4799999999999999999999999999999999999999999999999999876643
No 21
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3.1e-18 Score=152.78 Aligned_cols=261 Identities=15% Similarity=0.118 Sum_probs=213.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHH
Q 044951 104 NFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTA 183 (375)
Q Consensus 104 ~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~ 183 (375)
.|..|.++.+.|-+++.++-+.....+. .+...++-++.+...++.....-.++..|++|++.++.++.|++..+.|+
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k--~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWK--KELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccc--ccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 5778899999999988887765543322 22223344667778889999999999999999999999999999999999
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHhHhhccc---c------cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC
Q 044951 184 VGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---D------LSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRS 254 (375)
Q Consensus 184 l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~ 254 (375)
+...++.|+|+++.++++.+++..|+.+.... | ...++.|+.+...+.+..++-+...+++.++.
T Consensus 125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~------ 198 (327)
T KOG1581|consen 125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY------ 198 (327)
T ss_pred HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC------
Confidence 99999999999999999999999999887653 1 12458899999999999999999999988753
Q ss_pred CCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhh
Q 044951 255 GSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSL 334 (375)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~ 334 (375)
+++++.++++.|+++++.-....+..+.+.+..++-. .+|..+.-++..++++.+-+...|.-+++.+|.+...+.+.
T Consensus 199 -k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~tt 276 (327)
T KOG1581|consen 199 -KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTT 276 (327)
T ss_pred -CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHH
Confidence 5899999999999998877665444455544444322 24555555666667777777777888999999999999999
Q ss_pred hhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 335 NKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 335 ~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
++.+++.++.++||++++..|++|..+++.|+.+-.+.|.
T Consensus 277 Rk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~ 316 (327)
T KOG1581|consen 277 RKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK 316 (327)
T ss_pred HHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence 9999999999999999999999999999999988666543
No 22
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.79 E-value=1.4e-17 Score=145.80 Aligned_cols=279 Identities=15% Similarity=0.120 Sum_probs=216.0
Q ss_pred HHHHHHHHHHHHHHHhhccCCC-hhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhh
Q 044951 85 YCISSCSMTLLNKVVLSTYNFN-AGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSL 163 (375)
Q Consensus 85 ~~~~s~~~~~~nK~~l~~~~f~-~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 163 (375)
.++..+....+..++++..+|. +.|.+|+.|+++-..+.++-...-..+....+ +|.+..++.+..++.+++|.|+
T Consensus 51 ~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP---~rtY~~la~~t~gtmGLsn~Sl 127 (367)
T KOG1582|consen 51 VFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIP---WRTYVILAFLTVGTMGLSNGSL 127 (367)
T ss_pred HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecc---hhHhhhhHhhhhhccccCcCcc
Confidence 3334444466788888888887 78899999987754433321111001122223 5677888888899999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc----cccchhhHHHHHHHHHHHHHHHH
Q 044951 164 KYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD----LSFDTKGYAWQIVNCILTASYSL 239 (375)
Q Consensus 164 ~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~s~~~~a~~~i 239 (375)
.|+|.+.-.+.|++..+-|++.+.++-++|+.+..+.+..++.+|.++....| ++||..|++..-++.++.|.-..
T Consensus 128 gYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGN 207 (367)
T KOG1582|consen 128 GYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGN 207 (367)
T ss_pred ccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999988765 57889999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHH
Q 044951 240 TLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWF 319 (375)
Q Consensus 240 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 319 (375)
+.+|.++..+ -+..++.+|..-.+.+.++.....++|....+.+-.-++........+-++.+++-.......
T Consensus 208 vQEk~m~~~~-------~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLal 280 (367)
T KOG1582|consen 208 VQEKAMKMNP-------ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLAL 280 (367)
T ss_pred HHHHHHhhCC-------CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHH
Confidence 9999998643 344678888888899988888888888655543311011111233333444444444444567
Q ss_pred hhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951 320 LQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 320 l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
++..++.++..+.+.++.+++++++++|..++|.+..-|..+++.|+++--+.|
T Consensus 281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 888899999999999999999999999999999999999999999999866655
No 23
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.79 E-value=2.7e-18 Score=144.75 Aligned_cols=147 Identities=18% Similarity=0.410 Sum_probs=128.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcC-----cch-hh
Q 044951 223 GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTG-----VIE-LP 296 (375)
Q Consensus 223 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~-~~ 296 (375)
|++++++|.++.|+|.++.|+.+++.. .++.+.+++++++|+++.+++.++|..++.|++....... +.. .+
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~--~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 78 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVS--SNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDP 78 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchH
Confidence 789999999999999999999988642 2235799999999999999999999988887765322211 122 44
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 297 MFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 297 ~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
..+..++.+|++++..+++.+++++++||+++++++.+|.+..+++|+++|||+++..+++|+++++.|+++|+|
T Consensus 79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 667888999999999999999999999999999999999999999999999999999999999999999999986
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.78 E-value=1.5e-16 Score=148.20 Aligned_cols=267 Identities=13% Similarity=0.119 Sum_probs=185.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHh-hCCccccccCHHHHHHHHHHHHHHHH
Q 044951 76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGF-FGAVSVEKLNWKLIKLWIPVNLIFIG 154 (375)
Q Consensus 76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (375)
...++++++|+... +..|++. +++.+.. . ++.++.+++..... .+. +. ...++.+..-+..|+....
T Consensus 4 l~~lia~~~wGs~g----~~~k~~~---g~~~~~~-~--~~~~g~l~~~~~~~~~~~-~~-~~~~~~~~~g~l~G~~w~i 71 (290)
T TIGR00776 4 LIALIPALFWGSFV----LINVKIG---GGPYSQT-L--GTTFGALILSIAIAIFVL-PE-FWALSIFLVGLLSGAFWAL 71 (290)
T ss_pred HHHHHHHHHHhhhH----HHHhccC---CCHHHHH-H--HHHHHHHHHHHHHHHHhC-Cc-ccccHHHHHHHHHHHHHHh
Confidence 34566788899884 4557654 5664433 2 56666665544322 221 11 1112333334445566788
Q ss_pred HHHHHhHhhcccchhHHHHHHH-HHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHhHhhcccccc-------cc-h
Q 044951 155 MLVSGMYSLKYINIAMVTILKN-MTNILTAVGELYMFRKRQNQKV----WTAMFLMIISAVSGSITDLS-------FD-T 221 (375)
Q Consensus 155 ~~~~~~~al~~~~vs~~~il~~-~~pvfv~l~~~~~~~~~~~~~~----~~~l~l~~~Gv~l~~~~~~~-------~~-~ 221 (375)
.+.++..|.++++++.+..+.+ +.++++.+.+.+++|||+++++ +++++++++|+++.+..+.+ .+ .
T Consensus 72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~ 151 (290)
T TIGR00776 72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFK 151 (290)
T ss_pred hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchh
Confidence 8899999999999999988888 8889999999999999999999 99999999999988653211 33 6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHH
Q 044951 222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVA 301 (375)
Q Consensus 222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (375)
.|++++++++++|+.|.+..|+. +.++++..+.+..........+.....+ ...+.....|..
T Consensus 152 ~Gi~~~l~sg~~y~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~ 214 (290)
T TIGR00776 152 KGILLLLMSTIGYLVYVVVAKAF-----------GVDGLSVLLPQAIGMVIGGIIFNLGHIL------AKPLKKYAILLN 214 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-----------CCCcceehhHHHHHHHHHHHHHHHHHhc------ccchHHHHHHHH
Confidence 89999999999999999999864 1567666444332111111111111100 011112222333
Q ss_pred HHHHhHHHHHHHHHHH-HHhh-ccCchhHhHHHhhhhHHHHHhHHhhccCcCccchh----hHHHHHHHhhHhhhhcc
Q 044951 302 ATASGFLGLAISFTSM-WFLQ-QTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNM----FSILFGLFAGIFFARAK 373 (375)
Q Consensus 302 l~~~~~~~~~~~~~~~-~~l~-~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~----iG~~l~l~G~~ly~~~k 373 (375)
++ .|++. .+.+..| ...+ +.++.+.++...++|+.+++.+++++||+.++.++ +|.++++.|+.+-...|
T Consensus 215 ~~-~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~ 290 (290)
T TIGR00776 215 IL-PGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK 290 (290)
T ss_pred HH-HHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence 33 77774 5555554 6777 89999999999999999999999999999999999 99999999998866544
No 25
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.75 E-value=2.6e-15 Score=130.75 Aligned_cols=247 Identities=14% Similarity=0.073 Sum_probs=189.9
Q ss_pred HHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH
Q 044951 95 LNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL 174 (375)
Q Consensus 95 ~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il 174 (375)
+.|-+|. .+. |.-.+++|..++.+++..+.+-. +.++++++++.+...|+....+|.+++.|++.+|.+.+..+
T Consensus 30 ~Ak~LFP--~vG-~~g~t~lRl~~aaLIll~l~RPw---r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAi 103 (292)
T COG5006 30 FAKSLFP--LVG-AAGVTALRLAIAALILLALFRPW---RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAI 103 (292)
T ss_pred HHHHHcc--ccC-hhhHHHHHHHHHHHHHHHHhhHH---HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhh
Confidence 6688886 445 67889999999988876643311 24567788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 044951 175 KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---DLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQA 251 (375)
Q Consensus 175 ~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~ 251 (375)
..+.|+.+.++.. +| .+..+.+.+.+.|..++.-. ..+.|+.|..+++++..||++|-+..||.-+.
T Consensus 104 EF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~---- 173 (292)
T COG5006 104 EFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA---- 173 (292)
T ss_pred hhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc----
Confidence 9999999887653 32 34455667788998876532 35678899999999999999999999887431
Q ss_pred ccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHH-HHHhhccCchhHhH
Q 044951 252 TRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTS-MWFLQQTGPTTYSL 330 (375)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~s~~t~si 330 (375)
.+.-+-+.+-...+.+..+|+.....+ +.+.+|.....-+..++++..+-|+. +-.+++.++-+.++
T Consensus 174 -----~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~ 241 (292)
T COG5006 174 -----EHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGT 241 (292)
T ss_pred -----CCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHH
Confidence 233334444444555555665442211 12223444455677788888888875 56899999999999
Q ss_pred HHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 331 VGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 331 ~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
...+||..+.+.|++++||.+|..||.|++.++.++.-.
T Consensus 242 LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 242 LLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred HHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999888643
No 26
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.74 E-value=8e-15 Score=131.01 Aligned_cols=278 Identities=11% Similarity=0.122 Sum_probs=206.9
Q ss_pred cCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh--CCcccccc--CHHHHHH
Q 044951 69 EHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF--GAVSVEKL--NWKLIKL 144 (375)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~--~~~~~~~~--~~~~~~~ 144 (375)
++..++....+.+.++||.. .++-|.+- +.| +..+...|.+.+..++...... +....... +++.+..
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~l----p~y~kll~---~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~ 74 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLL----PLYFKLLE---PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLM 74 (293)
T ss_pred CcccchhHHHHHHHHHHHHH----HHHHHHHc---cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHH
Confidence 33556778888899999988 66778764 456 7889999988887666554332 11111111 2234444
Q ss_pred HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhH
Q 044951 145 WIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGY 224 (375)
Q Consensus 145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~ 224 (375)
....++....+++.+.+|...-.+=.+.+-....|++.++++++++|||.++.++++++++.+||....+...++++..+
T Consensus 75 ~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval 154 (293)
T COG2962 75 LALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVAL 154 (293)
T ss_pred HHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence 56666778888999999998877777778889999999999999999999999999999999999998888788886643
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHH
Q 044951 225 AWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATA 304 (375)
Q Consensus 225 ~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (375)
.=++.+++|...=|+. ++|+.+-.....+.-.|..+......++-.... ..+.+..|..+..
T Consensus 155 ----~la~sf~~Ygl~RK~~-----------~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~ 216 (293)
T COG2962 155 ----ALALSFGLYGLLRKKL-----------KVDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVL 216 (293)
T ss_pred ----HHHHHHHHHHHHHHhc-----------CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHH
Confidence 4467788887755543 377777777777666677666555544422211 1122334566777
Q ss_pred HhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 305 SGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
.|..+.+--......-++.+=.+.++..+.+|....++|+++|||+++..+.+..+.+-.|.++|...
T Consensus 217 aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 217 AGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred hhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77766543322236788999999999999999999999999999999999999999999999998653
No 27
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.71 E-value=7.1e-17 Score=141.93 Aligned_cols=254 Identities=19% Similarity=0.285 Sum_probs=195.9
Q ss_pred hHHHHHHHHHHHHHHHHHHH-hhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcc-cchhHHHHHHHHHHHHHHHH
Q 044951 108 GISLMFYQNLISTLVVAVFG-FFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKY-INIAMVTILKNMTNILTAVG 185 (375)
Q Consensus 108 p~~l~~~q~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~vs~~~il~~~~pvfv~l~ 185 (375)
--.+|+.|+++...--++.- .+...+ ++.+ .|.+...-..+...++++|+++++ +|++..-+.|+-+++-+|++
T Consensus 33 gNLITFaqFlFia~eGlif~skf~~~k-~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 33 GNLITFAQFLFIATEGLIFTSKFFTVK-PKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eeehHHHHHHHHHHhceeeeccccccC-CCCc---hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 45788899887555433321 111112 3344 445566666777889999999998 99999999999999999999
Q ss_pred HHHHhcccccHHHHHHHHHHHHHhHhhccc---ccc--------------cc--hhhHHHHHHHHHHHHHHHHHHHHHHh
Q 044951 186 ELYMFRKRQNQKVWTAMFLMIISAVSGSIT---DLS--------------FD--TKGYAWQIVNCILTASYSLTLRRVMD 246 (375)
Q Consensus 186 ~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~~~--------------~~--~~G~~~~l~s~~~~a~~~i~~k~~~~ 246 (375)
++++.|+|++.+++.+++++.+|+++.... |.. +. ..|+.+...+.+..|...++.++..+
T Consensus 109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ 188 (330)
T KOG1583|consen 109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ 188 (330)
T ss_pred HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987652 111 11 35888888999999999999999988
Q ss_pred hhhhhccCCCCCchhHHHHHhhhHHHHHHHHH-HHhhhhhHhHhcC-----c--chhhHHHHHHHHHhHHHHHHHHHHHH
Q 044951 247 KAKQATRSGSLNEVSMVLLNNLLSLPFAMFLI-LIFDEWRYVMNTG-----V--IELPMFWVAATASGFLGLAISFTSMW 318 (375)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~-----~--~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (375)
++. =++-+.+||+.+.+.|..+... -...+|......+ . ..-|..|..++.+++.-++..-..+.
T Consensus 189 kyG-------Kh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~ 261 (330)
T KOG1583|consen 189 KYG-------KHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYI 261 (330)
T ss_pred Hhc-------CChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhh
Confidence 754 2456899999999888766531 1122344333221 1 12466788888888777766666667
Q ss_pred HhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 319 FLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 319 ~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
.-.++++.|++++-++++.+..+++++.|+++++++.|+|..++..|.++|+-.
T Consensus 262 L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 262 LTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred hhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999999999999999999999999753
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.70 E-value=1.9e-15 Score=136.49 Aligned_cols=210 Identities=13% Similarity=0.229 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc-
Q 044951 139 WKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL- 217 (375)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~- 217 (375)
+++...+...+++|...+.+.+.++++++.+++++++++..+++++++.+++|||.++++|.++.+.++|+.+...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4556667778889999999999999999999999999999999999999999999999999999999999998755311
Q ss_pred --------c--------cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHh
Q 044951 218 --------S--------FDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIF 281 (375)
Q Consensus 218 --------~--------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 281 (375)
. ....|++..+.++++.++..++.+|++++.+ .+.+.........+.++.++... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-------~s~~~~N~qL~~~gi~~~~~~~~-~ 165 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-------VSLWIQNMQLYLFGILFNLLALL-L 165 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-------hhHHHHHHHHHHHHHHHHHHHHh-c
Confidence 1 1257999999999999999999999998632 55565555556667766655533 2
Q ss_pred hhhhHhHh---cCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhH
Q 044951 282 DEWRYVMN---TGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFS 358 (375)
Q Consensus 282 ~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG 358 (375)
.++....+ +++++ +..|..+...++.|..+.+ .+|+.+...-+....+.-+.+.++++++||.+++....+|
T Consensus 166 ~~~~~~~~~g~f~G~~-~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg 240 (244)
T PF04142_consen 166 SDGSAISESGFFHGYS-WWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG 240 (244)
T ss_pred ccccccccCCchhhcc-hHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence 34433222 23342 3456666777777766664 4899999999999999999999999999999999999998
Q ss_pred HHH
Q 044951 359 ILF 361 (375)
Q Consensus 359 ~~l 361 (375)
..+
T Consensus 241 ~~~ 243 (244)
T PF04142_consen 241 AAL 243 (244)
T ss_pred eec
Confidence 765
No 29
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.69 E-value=1.2e-15 Score=139.76 Aligned_cols=226 Identities=15% Similarity=0.113 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc--
Q 044951 140 KLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-- 217 (375)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-- 217 (375)
+..+.-+..+.+-.+.++++|.||.+++++..+++.+++-+||..++.++-.||+++.+.+++++.+.|++++..+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 334444555666677899999999999999999999999999999999999999999999999999999999988743
Q ss_pred ------ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcC
Q 044951 218 ------SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTG 291 (375)
Q Consensus 218 ------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (375)
+-+..|.++++++|++||+|.++.||..++. ..++|.-....|..++....+.|..++..-. ....++
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~e-----g~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~ 310 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDE-----GERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFE 310 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccc-----cccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCccc
Confidence 2347899999999999999999999976542 1356655555566666666666544332221 111121
Q ss_pred cchhhHHHHHHHHHhHHHHH-HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 292 VIELPMFWVAATASGFLGLA-ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
-.....+ ..+++.++++.+ --|...++.-.+||.+.++..++.-..+++.-.++=+.++++.+++|...+++|.+..+
T Consensus 311 lP~~~q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 311 LPSSTQF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred CCCCcee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 1112222 345555566554 45665588889999999999999999999999988899999999999999999998877
Q ss_pred hc
Q 044951 371 RA 372 (375)
Q Consensus 371 ~~ 372 (375)
+.
T Consensus 390 ~~ 391 (416)
T KOG2765|consen 390 IS 391 (416)
T ss_pred cc
Confidence 64
No 30
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.7e-13 Score=125.87 Aligned_cols=273 Identities=14% Similarity=0.198 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHhhcc--CCChhHHHHHHHHHHHHHHHHHHHhhC-----Ccccccc------CHHHHHHHHHHHHHHHH
Q 044951 88 SSCSMTLLNKVVLSTY--NFNAGISLMFYQNLISTLVVAVFGFFG-----AVSVEKL------NWKLIKLWIPVNLIFIG 154 (375)
Q Consensus 88 ~s~~~~~~nK~~l~~~--~f~~p~~l~~~q~~~~~l~l~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~~ 154 (375)
.+.++.+.-||.-... .|. |.+..+.--++-.+++......+ ....+.+ .+++..++...+++|++
T Consensus 26 ~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal 104 (345)
T KOG2234|consen 26 QNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL 104 (345)
T ss_pred HHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence 3444456666665543 344 55555554444444443322221 1111111 23355567777889999
Q ss_pred HHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc-----c------cccchhh
Q 044951 155 MLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT-----D------LSFDTKG 223 (375)
Q Consensus 155 ~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~-----~------~~~~~~G 223 (375)
.+.+...++.+.+.+++++..++..+.|+++.+++++||.++++|.++++.++|+.+.-.. + ..-++.|
T Consensus 105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G 184 (345)
T KOG2234|consen 105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLG 184 (345)
T ss_pred hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999997621 1 1223789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHh---cCcchhhHHHH
Q 044951 224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMN---TGVIELPMFWV 300 (375)
Q Consensus 224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~ 300 (375)
+...+.++++.++-.++.+|++++. +.+.|-...-...++.++.+..... .|+..... +.++ +...|.
T Consensus 185 ~~avl~~c~~SgfAgvYfEkiLK~s-------~~s~wi~NiqL~~~g~~f~~l~~~~-~d~~~i~~~gff~G~-s~~vw~ 255 (345)
T KOG2234|consen 185 LVAVLVACFLSGFAGVYFEKILKGS-------NVSLWIRNIQLYFFGILFNLLTILL-QDGEAINEYGFFYGY-SSIVWL 255 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-------CchHHHHHHHHHHHHHHHHHHHHhh-ccccccccCCccccc-cHHHHH
Confidence 9999999999999999999998752 3455544444444555555444333 24333321 2233 345678
Q ss_pred HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
.++..++.|..+++. +++.+-..-..+..+..+.+.+.++.+||-++|....+|..+++.++.+|+..+.
T Consensus 256 vVl~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 256 VVLLNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred HHHHHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 888888888777654 6777777778888888999999999999999999999999999999999986543
No 31
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.61 E-value=1.7e-16 Score=138.84 Aligned_cols=263 Identities=13% Similarity=0.094 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccc--cccCHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 044951 88 SSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSV--EKLNWKLIKLWIPVNLIFIGMLVSGMYSLKY 165 (375)
Q Consensus 88 ~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 165 (375)
++.++.+..| +++ ++ |..+...|+++-.+..+.+........ ++-.|+ .++.-|+.-.......++|++|
T Consensus 49 f~~~~vv~t~-~~e---~~-p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~---~LiLRg~mG~tgvmlmyya~~~ 120 (346)
T KOG4510|consen 49 FNSCMVVSTK-VLE---ND-PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRK---WLILRGFMGFTGVMLMYYALMY 120 (346)
T ss_pred HhhHHHhhhh-hhc---cC-hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEE---EEEeehhhhhhHHHHHHHHHhh
Confidence 3444444444 433 34 777887786666555554432211111 111111 1122255555667778899999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc-----ccc---------ccchhhHHHHHHHH
Q 044951 166 INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI-----TDL---------SFDTKGYAWQIVNC 231 (375)
Q Consensus 166 ~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~-----~~~---------~~~~~G~~~~l~s~ 231 (375)
.+.+-++++..++|+|+.++++.++||+.+..+.++..+.+.||+++.. ||. +.+..|.+-++.+.
T Consensus 121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~ 200 (346)
T KOG4510|consen 121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSV 200 (346)
T ss_pred cchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhH
Confidence 9999999999999999999999999999999999999999999999853 221 23456888888888
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHH
Q 044951 232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLA 311 (375)
Q Consensus 232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (375)
+..|.--++.|++-+ +.+..-...|...++.+..++.....++++... .+. .|..++..|++++.
T Consensus 201 lf~asvyIilR~iGk---------~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~---cgk---dr~l~~~lGvfgfi 265 (346)
T KOG4510|consen 201 LFGASVYIILRYIGK---------NAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH---CGK---DRWLFVNLGVFGFI 265 (346)
T ss_pred hhhhhHHHHHHHhhc---------cccEEEEehHHHHHHHHHHHHHHhhccceecCc---ccc---ceEEEEEehhhhhH
Confidence 888887788877633 356555555656666666555444445444321 111 23466778888888
Q ss_pred HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951 312 ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 312 ~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
.+...-..+++--+...++..+..-+++.+.-+++|++.++++.++|+++++.+.++....|
T Consensus 266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 77776677777777788999999999999999999999999999999999988887765443
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.58 E-value=2.5e-13 Score=119.93 Aligned_cols=218 Identities=16% Similarity=0.220 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc-----
Q 044951 143 KLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL----- 217 (375)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~----- 217 (375)
+..+|.+++=....-+-+.++.+++++-+||+|....+||.+++..+++++.+.++|+++....+|++.++..|.
T Consensus 87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~ 166 (372)
T KOG3912|consen 87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD 166 (372)
T ss_pred ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence 345666776666666778899999999999999999999999999999999999999999999999998876432
Q ss_pred -----ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHh-----h-----
Q 044951 218 -----SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIF-----D----- 282 (375)
Q Consensus 218 -----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~----- 282 (375)
+-...|..+.+++-+..|.+.+..+|.+++.+ .+|.+...|..+++...+..+.+.. +
T Consensus 167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~n-------V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~ 239 (372)
T KOG3912|consen 167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSN-------VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC 239 (372)
T ss_pred CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhcc-------CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence 22256999999999999999999999888754 8899999999998876655543321 1
Q ss_pred -------hhhHhHhcCcc-hhhHHHHHHHHHhHHH--HHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCc
Q 044951 283 -------EWRYVMNTGVI-ELPMFWVAATASGFLG--LAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLS 352 (375)
Q Consensus 283 -------~~~~~~~~~~~-~~~~~~~~l~~~~~~~--~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t 352 (375)
||.+.+. .. ..|. +.+...|... ...|+......+..|++|-.+...++..+..+++.....|.+.
T Consensus 240 ~~~g~~eD~~~~~~--~~~e~p~--l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ 315 (372)
T KOG3912|consen 240 NPRGVLEDWGDAFA--ALQESPS--LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH 315 (372)
T ss_pred CCCcchhhHHHHHH--HhcCCch--hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence 1111110 00 0121 2333333322 2346666677888999999999999999999999999999999
Q ss_pred cchhhHHHHHHHhhHhhhh
Q 044951 353 VPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 353 ~~~~iG~~l~l~G~~ly~~ 371 (375)
..|+.|.++-+.|+++|+.
T Consensus 316 llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 316 LLQILGFLILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999974
No 33
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.27 E-value=3.4e-11 Score=107.91 Aligned_cols=187 Identities=16% Similarity=0.175 Sum_probs=129.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc---------------------------c
Q 044951 166 INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL---------------------------S 218 (375)
Q Consensus 166 ~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~---------------------------~ 218 (375)
+++|.....++..++++++.+....++|++..++++.+++..|+.....+|. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 5788899999999999999999999999999999999999999875332211 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhh----hhHhHhc---C
Q 044951 219 FDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDE----WRYVMNT---G 291 (375)
Q Consensus 219 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~---~ 291 (375)
..+.|....+.++++.++-.++.++..+++ +.++|.+....+...+.....++ ....... .
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG------------DTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI 149 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCC------------CCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc
Confidence 224566666777777777777777654421 12244444444444433211111 1111111 1
Q ss_pred cchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 292 VIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
++ +...|..++..++. .....+.+++.++++.+++..++++.+.++++++||++++..+++|..+++.|+.+|
T Consensus 150 ~~-~~~~~~~~~~~a~~----~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 150 GY-PTAVWIVGLLNVGG----GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred CC-chHHHHHHHHHHhc----CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 11 22233333333332 333457799999999999999999999999999999999999999999999998876
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.22 E-value=1.2e-10 Score=94.09 Aligned_cols=117 Identities=21% Similarity=0.351 Sum_probs=96.4
Q ss_pred HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCccccccCHHHHHHHHHHHHH-HHHHHHHHhHhhcccchhH
Q 044951 93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVSVEKLNWKLIKLWIPVNLI-FIGMLVSGMYSLKYINIAM 170 (375)
Q Consensus 93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~vs~ 170 (375)
..++|...+ +++ |...+++|+.++.+ +..+... +..+.++.+++++......+++ ......+.+.++++++++.
T Consensus 7 ~~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 82 (126)
T PF00892_consen 7 SVFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI 82 (126)
T ss_pred HHHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH
Confidence 567898887 467 88899999999986 4433332 2222345566667777777766 5889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951 171 VTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS 213 (375)
Q Consensus 171 ~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~ 213 (375)
.+++.++.|+++.+++++++||++++++++++++++.|++++.
T Consensus 83 ~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 83 VSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998764
No 35
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.09 E-value=8.6e-10 Score=86.55 Aligned_cols=132 Identities=14% Similarity=0.124 Sum_probs=107.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCcc-ccccCHHHHHHHHHHHHHHH
Q 044951 76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVS-VEKLNWKLIKLWIPVNLIFI 153 (375)
Q Consensus 76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ 153 (375)
..++++.++|++. .++.|..++ +.+ |.+-+..|.++....+..+... |..+ ....+.|.+..+..-|+.-.
T Consensus 6 ~~ALLsA~fa~L~----~iF~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~g 78 (140)
T COG2510 6 IYALLSALFAGLT----PIFAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGG 78 (140)
T ss_pred HHHHHHHHHHHHH----HHHHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHH
Confidence 4556677778777 568899998 567 7888999999887777665443 3211 22346677777777788889
Q ss_pred HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
+.+.+++.|++.-++|...-+-.++|+++.+++++++|||++..+|+++.++++|+++++.
T Consensus 79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 9999999999999999999999999999999999999999999999999999999987653
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.06 E-value=9e-10 Score=92.84 Aligned_cols=212 Identities=13% Similarity=0.109 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc--ccc
Q 044951 142 IKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD--LSF 219 (375)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~--~~~ 219 (375)
+++..|.+++..+.++.+..+++.++.+.++.+.++.-.|+.+++++.+|+|+..-++++.++++.|++++++.| ...
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 344567777888899999999999999999999999999999999999999999999999999999999999865 456
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHH-----HHH---hhhhhHhHhcC
Q 044951 220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFL-----ILI---FDEWRYVMNTG 291 (375)
Q Consensus 220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~---~~~~~~~~~~~ 291 (375)
++.|+..+++|++..|+|.++.|+.....+ +. +...+++..++.-+... .+. .|.|+.. ...
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-------~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF-A~~ 202 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNAN-------FG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF-AAA 202 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCc-------ch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH-hhC
Confidence 789999999999999999999999876432 22 33333333333222211 111 1223321 111
Q ss_pred cchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 292 VIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 292 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
. |.-+...+.+....++.....+..+.|.-.|+-....-.-......++-+-..+...+.|.++++.|.++.
T Consensus 203 P------WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi 274 (290)
T KOG4314|consen 203 P------WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI 274 (290)
T ss_pred C------chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence 2 34444555555556666555666777877777666655666666666666778888999999999998774
No 37
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.03 E-value=6.9e-11 Score=103.34 Aligned_cols=256 Identities=13% Similarity=0.100 Sum_probs=176.5
Q ss_pred HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHH
Q 044951 93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVT 172 (375)
Q Consensus 93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~ 172 (375)
.+.+.++-.. +.+.|..=++..+..-+++-.....++. +.+ ...|++++.+++.=.=.+++--.|.||++..-..
T Consensus 34 a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~-~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~ 108 (336)
T KOG2766|consen 34 AFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR---KYI-KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIM 108 (336)
T ss_pred hhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh---HHH-HHHHHHhhheeEEeecccEEEeeehhhcchHHHH
Confidence 4455555443 4666766666555443333333333332 111 2235556666655555566666899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc--------cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 044951 173 ILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD--------LSFDTKGYAWQIVNCILTASYSLTLRRV 244 (375)
Q Consensus 173 il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~s~~~~a~~~i~~k~~ 244 (375)
.+-+-..+.+++++++++|.|+.+.++.++...+.|++++...| .+-+..|++++++++-+||.-++..+.+
T Consensus 109 lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEfl 188 (336)
T KOG2766|consen 109 LLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFL 188 (336)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHH
Confidence 99999999999999999999999999999999999999987653 2334689999999999999988887776
Q ss_pred HhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHH-hHHHHHHHHHHH-HHhhc
Q 044951 245 MDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATAS-GFLGLAISFTSM-WFLQQ 322 (375)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~-~~l~~ 322 (375)
.+ +.+..+.+.+.++++.+...+-.+ .+ ..... .-+|... ...+. ..+..++.|+.. ..++.
T Consensus 189 vk---------n~d~~elm~~lgLfGaIIsaIQ~i-~~-~~~~~-tl~w~~~----i~~yl~f~L~MFllYsl~pil~k~ 252 (336)
T KOG2766|consen 189 VK---------NADRVELMGFLGLFGAIISAIQFI-FE-RHHVS-TLHWDSA----IFLYLRFALTMFLLYSLAPILIKT 252 (336)
T ss_pred Hh---------cCcHHHHHHHHHHHHHHHHHHHHh-hh-cccee-eEeehHH----HHHHHHHHHHHHHHHHhhHHheec
Confidence 55 367778887777777766655422 22 11111 1133211 11222 223333445544 46778
Q ss_pred cCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 323 TGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 323 ~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
+|++...+.-......++++ ..||-+.++.-.+..+.+..|.++|.-
T Consensus 253 ~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 253 NSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred CCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 88888888777788888887 778888999999999999999999954
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.02 E-value=3.1e-09 Score=84.68 Aligned_cols=104 Identities=22% Similarity=0.331 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHhhCC--ccc-cccCHHHHHHHHHHHHHH-HHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 044951 113 FYQNLISTLVVAVFGFFGA--VSV-EKLNWKLIKLWIPVNLIF-IGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELY 188 (375)
Q Consensus 113 ~~q~~~~~l~l~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~ 188 (375)
.+|+.++.+++......+. .+. +..+++.+..+...+++. .....+..+|+++.+ +...++.+++|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4677777766655443321 111 122223344445556555 488999999999999 68889999999999999999
Q ss_pred HhcccccHHHHHHHHHHHHHhHhhccccc
Q 044951 189 MFRKRQNQKVWTAMFLMIISAVSGSITDL 217 (375)
Q Consensus 189 ~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~ 217 (375)
++|||++++++.+++++++|++++.+.|.
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999988764
No 39
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.01 E-value=2.6e-09 Score=83.90 Aligned_cols=135 Identities=12% Similarity=0.235 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951 224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT 303 (375)
Q Consensus 224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (375)
.+|++++++.+++-.++.|--.+ ..||.--++.-+.....++..+....+.|+...+. ++..|..++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~---------~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~----~~k~~lfli 71 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE---------GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI----GPKSWLFLI 71 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc---------ccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc----Ccceehhhh
Confidence 58999999999999998876554 37887777777777777777777777777654221 334467888
Q ss_pred HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
++|+.+-.--+..|++++.=.+.......-..+++++++|++++||.++..+++|++++..|.++.++
T Consensus 72 lSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 72 LSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99976666566667899988888889999999999999999999999999999999999999887543
No 40
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.97 E-value=1.6e-07 Score=85.10 Aligned_cols=209 Identities=14% Similarity=0.137 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhHhhcc
Q 044951 140 KLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVW----TAMFLMIISAVSGSI 214 (375)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~----~~l~l~~~Gv~l~~~ 214 (375)
+.+..-+..|++....+...+.|.+++.+|.+-=+ ...+.+.+.+.+.++++|..+...+ ++++++++|+++.++
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 55666777888999999999999999888765444 4788889999999999998876665 488899999999887
Q ss_pred ccccc--------chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhH
Q 044951 215 TDLSF--------DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRY 286 (375)
Q Consensus 215 ~~~~~--------~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (375)
.|.+. ...|+...+.+.+.|..|.+..|-. +.|+++..+=+.+-.....+++....+ +.
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~-----------~~~~~~~~lPqaiGm~i~a~i~~~~~~--~~ 189 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF-----------HVSGWSAFLPQAIGMLIGAFIFNLFSK--KP 189 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------CCChhHhHHHHHHHHHHHHHHHhhccc--cc
Confidence 54321 2469999999999999999987652 378888887665544444444443321 11
Q ss_pred hHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccch----hhHHHHH
Q 044951 287 VMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPN----MFSILFG 362 (375)
Q Consensus 287 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~----~iG~~l~ 362 (375)
..+ ...| .=+..|++....|...+...++.+..+.-...-+..+++++.|.++++|.-+..+ ++|.+++
T Consensus 190 ~~~------k~~~-~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Li 262 (269)
T PF06800_consen 190 FFE------KKSW-KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILI 262 (269)
T ss_pred ccc------cchH-HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHH
Confidence 111 1112 2356677777777777778888899888889999999999999999999988764 4677777
Q ss_pred HHhhHh
Q 044951 363 LFAGIF 368 (375)
Q Consensus 363 l~G~~l 368 (375)
+.|.++
T Consensus 263 v~G~il 268 (269)
T PF06800_consen 263 VIGAIL 268 (269)
T ss_pred HHhhhc
Confidence 777654
No 41
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.97 E-value=3.8e-09 Score=85.15 Aligned_cols=124 Identities=17% Similarity=0.274 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHH
Q 044951 232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLA 311 (375)
Q Consensus 232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 311 (375)
++||.+.+..|+..++ .++....++....+.+ .++.....+..+ ...+ ++..+....+.++++..
T Consensus 1 ~~~a~~~~~~k~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 65 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK---------ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNL-SPRQWLWLLFLGLLGTA 65 (126)
T ss_pred ceeeeHHHHHHHHhcc---------CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCC-ChhhhhhhhHhhcccee
Confidence 3678888888887653 7899999999888887 555555444332 1111 12223455666666544
Q ss_pred -HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 312 -ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 312 -~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
.....++.++++++...++...++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44445589999999999999999999999999999999999999999999999998764
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.75 E-value=3.3e-07 Score=85.85 Aligned_cols=140 Identities=11% Similarity=0.151 Sum_probs=103.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHH
Q 044951 219 FDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMF 298 (375)
Q Consensus 219 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 298 (375)
-...|.++.++++++|+...+..|.. . ++++.++.++...++.+++++.....+++...... ..++..
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---------~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~ 72 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---------YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQK 72 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c---------CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHH
Confidence 34579999999999999999999753 2 37899999999988887776655433332221110 011222
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 299 WVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 299 ~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
+...+..++.........++.++++++.+.++..+..|++++++++++++|+++..+++|+++.+.|+++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 73 IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 222233333333445555689999999999999999999999999999999999999999999999998753
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.74 E-value=3.6e-07 Score=83.69 Aligned_cols=138 Identities=14% Similarity=0.196 Sum_probs=104.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-HhcCcchhhHHHH
Q 044951 222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-MNTGVIELPMFWV 300 (375)
Q Consensus 222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 300 (375)
.|+.++++++++|+...+..|.. . ++++.++.++-..++.+.+++.....+..... .+....+....+.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~---------~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K---------PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLIL 71 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c---------cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHH
Confidence 48899999999999999998863 2 28999999999988887766654443332211 0111111111233
Q ss_pred HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
.+...|++........++.++++++.++++..+..|++++++++++++|+++..+++|.++.+.|+++-
T Consensus 72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 456666665555555568899999999999999999999999999999999999999999999998754
No 44
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.73 E-value=4.6e-07 Score=82.93 Aligned_cols=131 Identities=15% Similarity=0.079 Sum_probs=97.0
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHH-
Q 044951 73 AVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI- 151 (375)
Q Consensus 73 ~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (375)
.+....+.+.+.|+.. ..+.|...++++.+ +.....+++.++.+++.+...... +....+.+.+...+..+++
T Consensus 128 ~G~~~~l~a~~~~a~~----~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 128 AGLLLGLGSGISFALG----TVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG-PNPQALSLQWGALLYLGLIG 201 (260)
T ss_pred HHHHHHHHHHHHHHHH----HHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHH
Confidence 3445556677777776 45678887644333 345555788888777766544322 1222344555555555554
Q ss_pred HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHh
Q 044951 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISA 209 (375)
Q Consensus 152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv 209 (375)
......++++++++++++..+++.++.|++.+++++++++|+++..++.+..+++.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 4678889999999999999999999999999999999999999999999999999986
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.61 E-value=8.6e-07 Score=82.34 Aligned_cols=132 Identities=10% Similarity=0.094 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951 224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT 303 (375)
Q Consensus 224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (375)
+++.+++++++|.+.+..||..++ .++ ..++......+..+|+...... .. +.... ....|..++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~---------~~~--~~~~~~~~~~~~l~~~~~~~~~-~~--~~~~~-~~~~~~~~~ 67 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK---------EPD--FLWWALLAHSVLLTPYGLWYLA-QV--GWSRL-PATFWLLLA 67 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc---------hhH--HHHHHHHHHHHHHHHHHHHhcc-cC--CCCCc-chhhHHHHH
Confidence 578899999999999999976543 122 3455554555555554432110 00 01110 122234555
Q ss_pred HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
..++......+..++.+++.++...++..+..|+++.+++++++||+++..+++|+++++.|+++-.
T Consensus 68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 6666666666666788999999999999999999999999999999999999999999999998754
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.45 E-value=7e-06 Score=78.63 Aligned_cols=137 Identities=14% Similarity=0.144 Sum_probs=104.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHH
Q 044951 222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVA 301 (375)
Q Consensus 222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (375)
.-+..+++.-++|+.+.++.|..++. .+++....++-..++.++++++....+..... +.. +...|..
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~--------G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~---~~~-~~~~~~~ 80 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSK--------GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL---PPL-SVSILSK 80 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHC--------CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc---Ccc-hHHHHHH
Confidence 34566778889999999999998864 48888988888888887777776543321110 110 1222345
Q ss_pred HHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhh------ccCcCccchhhHHHHHHHhhHhhh
Q 044951 302 ATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVL------FNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 302 l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~------f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
+...|++++..+...+..++++++..+++..+..|+++.++++++ ++|+++..+++|+++++.|+.+-.
T Consensus 81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 566777774444455688999999999999999999999999999 699999999999999999987643
No 47
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.42 E-value=3.1e-06 Score=66.97 Aligned_cols=65 Identities=8% Similarity=0.140 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
+++.+..++...+++.+|++.+..+.++.++++.+.+++++|||+++++++++.++++|+++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 45788899999999999999999999999999999999999999999999999999999988753
No 48
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.37 E-value=8e-06 Score=76.23 Aligned_cols=213 Identities=11% Similarity=0.103 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc---c-cccc-----
Q 044951 150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---D-LSFD----- 220 (375)
Q Consensus 150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~-~~~~----- 220 (375)
+.+.+...+...|+.+.|.+..+-+.+.+.++.++++.+++|||++++.+.|+.+++.|+.++... + ...+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 455677788899999999999999999999999999999999999999999999999999876542 1 1111
Q ss_pred ----hhh---HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhH-hcCc
Q 044951 221 ----TKG---YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVM-NTGV 292 (375)
Q Consensus 221 ----~~G---~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~ 292 (375)
-.+ +........ ..+.....+|. . +-+..-.....+.++....+..-...+-..... ..+.
T Consensus 138 ~~~~~~~fl~y~~~~~~~~-~~L~~~~~~r~----g------~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~ 206 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLVLI-LILIFFIKPRY----G------RRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQ 206 (300)
T ss_pred HHhcCcceehhHHHHHHHH-HHHHHhhcchh----c------ccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchh
Confidence 012 111111111 11111111111 0 111111011111112111111100000011111 1122
Q ss_pred chhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHH-hhhhHHHHHhHHhhccC--cCccc----hhhHHHHHHHh
Q 044951 293 IELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVG-SLNKIPISLAGLVLFNV--PLSVP----NMFSILFGLFA 365 (375)
Q Consensus 293 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~-~~~~v~~i~~~~~~f~e--~~t~~----~~iG~~l~l~G 365 (375)
..++..|..++...+++....+...+.+++.+++...... .+-...+++.|.++|+| ..+.. ...|..+++.|
T Consensus 207 f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G 286 (300)
T PF05653_consen 207 FTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG 286 (300)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence 3455666665555555555555556788888766544443 33566888888999985 44553 35677778888
Q ss_pred hHhhhhcc
Q 044951 366 GIFFARAK 373 (375)
Q Consensus 366 ~~ly~~~k 373 (375)
+.+-+..|
T Consensus 287 V~lL~~~~ 294 (300)
T PF05653_consen 287 VFLLSSSK 294 (300)
T ss_pred hheeeccC
Confidence 88776655
No 49
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.36 E-value=1.4e-05 Score=74.68 Aligned_cols=135 Identities=11% Similarity=0.080 Sum_probs=95.8
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccc-cccCHHHHHHHHHHHHH-
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSV-EKLNWKLIKLWIPVNLI- 151 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 151 (375)
+....+.+.+.|...+ ..+|..-. +.+...+.+|+.++.+.+.+......... ...+.+.+..+...+++
T Consensus 151 G~l~~l~a~~~~a~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~ 222 (292)
T PRK11272 151 GAILILIASASWAFGS----VWSSRLPL----PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFG 222 (292)
T ss_pred HHHHHHHHHHHHHHHH----HHHHhcCC----CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHH
Confidence 3444555666666653 44565422 12445677888888776655543321111 11234445555555654
Q ss_pred HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD 216 (375)
Q Consensus 152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~ 216 (375)
..+...++++++++++.+...++..+.|++.+++++++++|++++.++++.++++.|+.+....+
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999998876543
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.26 E-value=4.2e-05 Score=71.49 Aligned_cols=131 Identities=17% Similarity=0.236 Sum_probs=89.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHH-HH
Q 044951 75 KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI-FI 153 (375)
Q Consensus 75 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 153 (375)
....+.+.+.|... .+..|...+ +.+ |.... ++.+++.+++..+...... ....++..+...+..+++ ..
T Consensus 150 ~ll~l~aa~~~a~~----~v~~r~~~~--~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~ 220 (293)
T PRK10532 150 AALALGAGACWAIY----ILSGQRAGA--EHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTA 220 (293)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHhc--cCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHH
Confidence 33444555566554 456676655 334 55544 4555555555443333211 112233433333445554 45
Q ss_pred HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
+...++++++++++.+.++++..++|++..++++++++|++++.++++.+++++|++....
T Consensus 221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 6777899999999999999999999999999999999999999999999999999887654
No 51
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.24 E-value=3.5e-05 Score=69.73 Aligned_cols=140 Identities=15% Similarity=0.246 Sum_probs=111.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951 220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW 299 (375)
Q Consensus 220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
+..|+++++.+-+.|+..-.+.|-+. ..++.++..+-.+.++++++.+......++...+ ..+.|..+
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~----------~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~ 72 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLE----------PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTL 72 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHH
Confidence 35799999999999999888887653 3788899999999999999888777788777654 23345444
Q ss_pred HHHHHHhHHHHHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 300 VAATASGFLGLAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
..+...++.- ..|...| |.+.+-....+|.--+.+|.+.+++|.++++|.++..|++.+++...|+..-.+.
T Consensus 73 ~~~~l~a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 73 LMLALTALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 4444444333 3466666 7888888899999999999999999999999999999999999999999775543
No 52
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.24 E-value=3.8e-05 Score=71.82 Aligned_cols=129 Identities=11% Similarity=0.077 Sum_probs=87.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHH
Q 044951 76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGM 155 (375)
Q Consensus 76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (375)
...+.+.+.|... .+++|..-++ .+ |.... ... ..+.+..............+++.+..++..++...+.
T Consensus 159 ~~~l~aa~~~A~~----~v~~k~~~~~--~~-~~~~~--~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~ 228 (295)
T PRK11689 159 GLAFIGAFIWAAY----CNVTRKYARG--KN-GITLF--FIL-TALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFG 228 (295)
T ss_pred HHHHHHHHHHHHH----HHHHhhccCC--CC-chhHH--HHH-HHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHH
Confidence 3445555666665 4566766543 34 44332 222 2222222112211112234455454455555556677
Q ss_pred HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
.+++++++++++++..+++.++.|++..++++++++|+++..++++.++++.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 88999999999999999999999999999999999999999999999999999877643
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.14 E-value=0.00011 Score=68.81 Aligned_cols=138 Identities=13% Similarity=0.088 Sum_probs=92.1
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHh-hCC-c----cccccCHHHHHHHHH
Q 044951 74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGF-FGA-V----SVEKLNWKLIKLWIP 147 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~-~~~-~----~~~~~~~~~~~~~~~ 147 (375)
+....+.+.+.|... .++.|....++.-+.......++++++.+.+..... ... . +....+.+.+..++-
T Consensus 144 G~~l~l~aal~~a~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 219 (299)
T PRK11453 144 GFMLTLAAAFSWACG----NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMY 219 (299)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHH
Confidence 344455566667666 456666554322222334445566555443332211 111 0 112334555555555
Q ss_pred HHHH-HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 148 VNLI-FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 148 ~~~~-~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
++++ ..+...+++.++++.+.+.+.++..++|++..++++++++|+++..++++.+++++|+.+...+
T Consensus 220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 6644 3567888999999999999999999999999999999999999999999999999999877543
No 54
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.08 E-value=0.00026 Score=59.16 Aligned_cols=119 Identities=18% Similarity=0.272 Sum_probs=90.7
Q ss_pred HHHHHHHhhc-----cCCChhHHHHHHHHHHHHHHHHHHHhh-CCccc----ccc-------CHHHHHHHHHHHHHHHHH
Q 044951 93 TLLNKVVLST-----YNFNAGISLMFYQNLISTLVVAVFGFF-GAVSV----EKL-------NWKLIKLWIPVNLIFIGM 155 (375)
Q Consensus 93 ~~~nK~~l~~-----~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~----~~~-------~~~~~~~~~~~~~~~~~~ 155 (375)
..+.|..+++ .+.+ |+.+.......+.+.+.+.... +..+. ... +.+.+..++..+++....
T Consensus 16 ~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (153)
T PF03151_consen 16 NVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLY 94 (153)
T ss_pred HHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHH
Confidence 4566777776 4666 7777777777777766655432 21110 000 123344455566777899
Q ss_pred HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
++..+..++++++-+++++.+...+++.+++.++++|+++..++.|+.+.++|+++-
T Consensus 95 n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 95 NLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999999999999999999998764
No 55
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.07 E-value=0.00016 Score=58.72 Aligned_cols=121 Identities=20% Similarity=0.262 Sum_probs=84.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHH
Q 044951 222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVA 301 (375)
Q Consensus 222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (375)
.|+++.+.+.++.+...++.|+-+++.. +.+.... . . ..... . ..| ..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g------~~~~~~~-~------~--~~~~~-~-------------~~p---~~ 49 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP------LLSHAWD-F------I--AALLA-F-------------GLA---LR 49 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC------CccchhH-H------H--HHHHH-H-------------hcc---HH
Confidence 4889999999999999999988765421 1111000 0 0 00000 0 011 12
Q ss_pred HHHHhHHHHHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHh--hccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951 302 ATASGFLGLAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLV--LFNVPLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 302 l~~~~~~~~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~--~f~e~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
.++.|++++...+..+ ..+++.+...+...-....+...+.++. +|||++|+.+++|+++++.|+++.+..+.
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 4566777777777665 6899999998888888887777777774 89999999999999999999999876543
No 56
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.04 E-value=0.0069 Score=57.35 Aligned_cols=233 Identities=9% Similarity=0.031 Sum_probs=139.2
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccc---c----HHHHHHHHHHHHH
Q 044951 137 LNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQ---N----QKVWTAMFLMIIS 208 (375)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~---~----~~~~~~l~l~~~G 208 (375)
.+.+.+..-+..|++....+.....+.+++.+|...-+ ..++.++..++..++++|.. + .....+++++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 34455556677788889999999999999999877654 66888888889888888754 2 3466889999999
Q ss_pred hHhhcc----ccc--------ccc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHH
Q 044951 209 AVSGSI----TDL--------SFD-TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAM 275 (375)
Q Consensus 209 v~l~~~----~~~--------~~~-~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 275 (375)
+++.+. .|. +++ ..|+++++++.+.+++|......-+.-.+ .......++.....-+......-.+
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~-~a~~~g~~~~~~~lp~~~~~~~G~~ 226 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHE-AAAALGVDPLYAALPSYVVIMGGGA 226 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhh-hhhhcCCCchHHHHHHHHHHHHHHH
Confidence 999877 332 122 57999999999999999954433221100 0001234444333322221111111
Q ss_pred HHH----HH---h-hhhhHhHhcCcchh--hHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHh----HHHhhhhHHHHH
Q 044951 276 FLI----LI---F-DEWRYVMNTGVIEL--PMFWVAATASGFLGLAISFTSMWFLQQTGPTTYS----LVGSLNKIPISL 341 (375)
Q Consensus 276 ~~~----~~---~-~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~s----i~~~~~~v~~i~ 341 (375)
... .. . +++....+...-+. ..-.......|+..+..++.....-++.+..... +...+.-+++.+
T Consensus 227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl 306 (345)
T PRK13499 227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL 306 (345)
T ss_pred HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence 111 10 0 11110111111000 1112344566666666666655555555333232 333566688888
Q ss_pred hHHhhccCcCc------cchhhHHHHHHHhhHhhhh
Q 044951 342 AGLVLFNVPLS------VPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 342 ~~~~~f~e~~t------~~~~iG~~l~l~G~~ly~~ 371 (375)
.|. +++|.-+ ...++|+++++.|.++-.+
T Consensus 307 wGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 307 WGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred hhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 888 5998877 6678999999999887654
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.96 E-value=0.00033 Score=67.14 Aligned_cols=137 Identities=12% Similarity=0.106 Sum_probs=99.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCC-chhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951 221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLN-EVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW 299 (375)
Q Consensus 221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
+.-..+.+..-.+...+.+..|.+++. .+ |+.+..++..++.....++.. .+ ....++.+. ....|
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~---------~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~--~~~~~ 114 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNM---------LPLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRIKS--LKLFL 114 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh---------CChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCCCC--HHHHH
Confidence 333445555555556667788888764 67 899998888777665444322 11 111111111 12245
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 300 VAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
..++..|+++....+..+..++++++..++++....|++++++++++++|+++..++.|+++++.|+.+-.
T Consensus 115 ~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 115 KNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 56777888877766666788999999999999999999999999999999999999999999999998754
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.96 E-value=0.00011 Score=68.96 Aligned_cols=132 Identities=11% Similarity=0.131 Sum_probs=88.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCccccccCH---------HHHHH-HH
Q 044951 78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVSVEKLNW---------KLIKL-WI 146 (375)
Q Consensus 78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~~~~~~---------~~~~~-~~ 146 (375)
.+.+.+.|..- .++.|...++.+.+ |..++.+++..+.+.+.+.... ...+....++ ..... .+
T Consensus 150 ~l~a~~~~a~~----~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T TIGR00817 150 AMISNITFVSR----NIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL 224 (302)
T ss_pred HHHHHHHHHHH----HHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence 33344444443 45677777633456 7888999998887766655432 2111100000 00111 11
Q ss_pred HHHH-HHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 147 PVNL-IFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 147 ~~~~-~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
..+. .+.+.+.+.+.++++++...+++.....|+++.++++++++|+++..+++|.+++++|+.+...
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 2222 3444456777899999999999999999999999999999999999999999999999887653
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.86 E-value=0.00026 Score=56.23 Aligned_cols=71 Identities=23% Similarity=0.301 Sum_probs=57.3
Q ss_pred HHHHHhHHHHHHHHHH-HHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 301 AATASGFLGLAISFTS-MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 301 ~l~~~~~~~~~~~~~~-~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
.++..|+++...++.. ++.+++.++ ..++...+.|+++.++|+++|+|+++..+++|.++++.|+++-.+.
T Consensus 36 ~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 36 WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 3455556655344444 477888885 7778889999999999999999999999999999999999987654
No 60
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.77 E-value=0.00027 Score=57.38 Aligned_cols=68 Identities=9% Similarity=0.101 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951 149 NLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELY--MFRKRQNQKVWTAMFLMIISAVSGSITD 216 (375)
Q Consensus 149 ~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~--~~~~~~~~~~~~~l~l~~~Gv~l~~~~~ 216 (375)
-+++.+..++++.+++..|++.+.-+.+..++++.+.++. ++||+++++++++++++++|++++..++
T Consensus 55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 3567889999999999999999999999999888888875 8999999999999999999999987543
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.74 E-value=0.0005 Score=64.11 Aligned_cols=129 Identities=17% Similarity=0.187 Sum_probs=89.8
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHH----HHHHHHHHHHhhCCccccccCHHHHHHHHH
Q 044951 72 PAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNL----ISTLVVAVFGFFGAVSVEKLNWKLIKLWIP 147 (375)
Q Consensus 72 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
+++....+++.+.|+.. ...+|.. +.+ |...++.|.. .+.++.... . + . ++.+.+..+..+.
T Consensus 151 ~~Gi~~~l~sg~~y~~~----~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~-~-~--~-~~~~~~~~~~~~~ 216 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVY----VVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGH-I-L--A-KPLKKYAILLNIL 216 (290)
T ss_pred hhHHHHHHHHHHHHHHH----HHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHH-h-c--c-cchHHHHHHHHHH
Confidence 34555555565555444 5667754 234 6666555544 333333322 1 1 1 1222333334455
Q ss_pred HHHHHHHHHHHHhHhhc-ccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhHhhcc
Q 044951 148 VNLIFIGMLVSGMYSLK-YINIAMVTILKNMTNILTAVGELYMFRKRQNQKVW----TAMFLMIISAVSGSI 214 (375)
Q Consensus 148 ~~~~~~~~~~~~~~al~-~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~----~~l~l~~~Gv~l~~~ 214 (375)
.|++....+.++..+++ +.+++.+.++.+..|+...+.+.+++||+.+++++ ++.++++.|+.+...
T Consensus 217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 77777777888889999 99999999999999999999999999999999999 999999999887653
No 62
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.72 E-value=0.0016 Score=60.03 Aligned_cols=131 Identities=13% Similarity=0.190 Sum_probs=89.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHH-HHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHH
Q 044951 75 KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMF-YQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI 153 (375)
Q Consensus 75 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~-~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (375)
....+.+.+.|... ...+|... + .+ +..... +++........... ....+ .+.+.+.+......+++..
T Consensus 156 ~~~~l~a~~~~a~~----~~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~g~~~~ 225 (292)
T COG0697 156 LLLALAAALLWALY----TALVKRLS-R--LG-PVTLALLLQLLLALLLLLLFF-LSGFG-APILSRAWLLLLYLGVFST 225 (292)
T ss_pred HHHHHHHHHHHHHH----HHHHHHhc-C--CC-hHHHHHHHHHHHHHHHHHHHH-hcccc-ccCCHHHHHHHHHHHHHHH
Confidence 33445555566644 45667665 2 23 333444 55552222222221 22111 3345566666777776665
Q ss_pred -HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 154 -GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 154 -~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
....+.+++++..+++..+++..+.|++.++.++++++|+++.+++++..+++.|+.+....
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 58889999999999999999999999999999999999999999999999999999887543
No 63
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.69 E-value=1e-05 Score=71.13 Aligned_cols=266 Identities=15% Similarity=0.159 Sum_probs=172.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHH
Q 044951 76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGM 155 (375)
Q Consensus 76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (375)
+.+++..+.|+..- .+.||.-- =|+.-++ -+.++++++.+...+- ..+..+.+.+..-+.-|.+..+.
T Consensus 5 liaL~P~l~WGsip---~v~~k~GG----~p~qQ~l---GtT~GALifaiiv~~~--~~p~~T~~~~iv~~isG~~Ws~G 72 (288)
T COG4975 5 LIALLPALGWGSIP---LVANKFGG----KPYQQTL---GTTLGALIFAIIVFLF--VSPELTLTIFIVGFISGAFWSFG 72 (288)
T ss_pred HHHHHHHHHhcccc---eeeeecCC----ChhHhhh---hccHHHHHHHHHHhee--ecCccchhhHHHHHHhhhHhhhh
Confidence 34566777898774 34555332 2322111 1222333322221111 22344555555556667788888
Q ss_pred HHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhHhhcccccc--------cchh
Q 044951 156 LVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVW----TAMFLMIISAVSGSITDLS--------FDTK 222 (375)
Q Consensus 156 ~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~----~~l~l~~~Gv~l~~~~~~~--------~~~~ 222 (375)
+...+.|.+++.+|-+.=+ ..++.+-+-+++.+.++|..+..+. .++++++.|+++-++.|.+ .--.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kk 152 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKK 152 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhh
Confidence 9999999999988866543 4578888889999999999876654 6788889999998876531 1136
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHH
Q 044951 223 GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAA 302 (375)
Q Consensus 223 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (375)
|+...+.|.+.|..|.++.+.. +.+.++..+-++.-+....+.+....+|... ....| .-
T Consensus 153 gi~~L~iSt~GYv~yvvl~~~f-----------~v~g~saiLPqAiGMv~~ali~~~~~~~~~~--------~K~t~-~n 212 (288)
T COG4975 153 GIVILLISTLGYVGYVVLFQLF-----------DVDGLSAILPQAIGMVIGALILGFFKMEKRF--------NKYTW-LN 212 (288)
T ss_pred heeeeeeeccceeeeEeeeccc-----------cccchhhhhHHHHHHHHHHHHHhhcccccch--------HHHHH-HH
Confidence 8888888999999998877654 3677777776665555555554443322111 11112 33
Q ss_pred HHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchh----hHHHHHHHhhHhhhhcc
Q 044951 303 TASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNM----FSILFGLFAGIFFARAK 373 (375)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~----iG~~l~l~G~~ly~~~k 373 (375)
+..|+....-|...+..-++.+-.|.=...-+--+++++-|.++++|+-|..++ +|++++++|.++....|
T Consensus 213 ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K 287 (288)
T COG4975 213 IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK 287 (288)
T ss_pred HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence 566777666777766666666655555555666788999999999999998764 67888888887776655
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.59 E-value=0.00043 Score=54.71 Aligned_cols=63 Identities=19% Similarity=0.175 Sum_probs=52.3
Q ss_pred HHHHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 308 LGLAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 308 ~~~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
+.+...+..+ ..+++.+...+...-.+.++.+.++|+++|||+++..+++|+++++.|+++-.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3343344333 67888888888888889999999999999999999999999999999998754
No 65
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.58 E-value=0.00061 Score=54.35 Aligned_cols=71 Identities=8% Similarity=0.102 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
....-+++....++...+++++|++.+-.+ .....+.+.+.+.++++|++++.+++++.++++|++++...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 455667788899999999999999987777 46899999999999999999999999999999999887554
No 66
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.54 E-value=0.0026 Score=49.87 Aligned_cols=68 Identities=18% Similarity=0.200 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
....-+++....++-..+++++|++.+-.+ .....+.+.+.+.+++||++++.+++++.+++.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 444456677888888999999999976655 55888999999999999999999999999999999875
No 67
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.50 E-value=0.0021 Score=50.61 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 146 IPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 146 ~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
...-+++....++...+++.+|++.+-.+ ....-+.+.+.+++++||++++.+++++.++++|++++...
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34456677888888999999999988777 45788999999999999999999999999999999988553
No 68
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.002 Score=49.81 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
....-+++..+.++-..|+|++|++.+-.+ .....+.+.+.+++++||+.+..+++++.++++|++.+-..
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 344556778888888999999999976544 67889999999999999999999999999999999887543
No 69
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.46 E-value=0.0026 Score=49.58 Aligned_cols=69 Identities=7% Similarity=0.099 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951 145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS 213 (375)
Q Consensus 145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~ 213 (375)
....-+++....++-..+++.+|++.+-.+ .....+.+.+.+.+++||+.++.+++++.++++|++.+.
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 344456778888888999999999976665 558899999999999999999999999999999998864
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.36 E-value=0.0095 Score=55.92 Aligned_cols=136 Identities=16% Similarity=0.183 Sum_probs=94.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh---CC-ccccc---cCHHHHHHHHHHHH
Q 044951 78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF---GA-VSVEK---LNWKLIKLWIPVNL 150 (375)
Q Consensus 78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~---~~-~~~~~---~~~~~~~~~~~~~~ 150 (375)
+++..++...+......+.+.++++++.+ |....++..+++.+...+.... +. .+..+ .....+..++..++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~ 233 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL 233 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence 33333344444444467889999988877 7777777777776655543332 11 01001 11123444555566
Q ss_pred HHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 151 IFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 151 ~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
.....+..-+...+..+.-..+++..+--+++.+++.+++++++++.+|.|+++.+.|..+-..
T Consensus 234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 6666666667778889999999999999999999999999999999999999999999877544
No 71
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.29 E-value=0.0025 Score=58.62 Aligned_cols=209 Identities=12% Similarity=0.143 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccc---c-c-----
Q 044951 150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLS---F-D----- 220 (375)
Q Consensus 150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~---~-~----- 220 (375)
+.+.+.-..++.|+.+-|.+..+-+-+++.++.++++..+++||.++.-.+++.++++|..+++...++ . +
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~ 151 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVW 151 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHH
Confidence 456777888889999999999999999999999999999999999999999999999998887664211 1 0
Q ss_pred ----hhhH---HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHH-HHH-Hhhh-hhHh-Hh
Q 044951 221 ----TKGY---AWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMF-LIL-IFDE-WRYV-MN 289 (375)
Q Consensus 221 ----~~G~---~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~~~-~~~~-~~ 289 (375)
-.|+ ...+.-.++.-.+ ..+ ++ +...| ++.|..+.+..-.+- .+. ..+. .... ..
T Consensus 152 ~~~~~~~Fliy~~~iil~~~il~~--~~~---p~------~g~tn---ilvyi~i~s~iGS~tV~svKalg~aiklt~~g 217 (335)
T KOG2922|consen 152 ELATEPGFLVYVIIIILIVLILIF--FYA---PR------YGQTN---ILVYIGICSLIGSLTVMSVKALGIAIKLTFSG 217 (335)
T ss_pred HHhcCccHHHHHHHHHHHHHHHhe--eec---cc------ccccc---eeehhhHhhhhcceeeeeHHHHHHHHHHHhcC
Confidence 0122 1111111111111 111 11 11122 233333222221100 000 0111 1111 11
Q ss_pred cCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHh-HHHhhhhHHHHHhHHhhccC--cCccch----hhHHHHH
Q 044951 290 TGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYS-LVGSLNKIPISLAGLVLFNV--PLSVPN----MFSILFG 362 (375)
Q Consensus 290 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~s-i~~~~~~v~~i~~~~~~f~e--~~t~~~----~iG~~l~ 362 (375)
......|..|..++....+.........++++..++...+ +...+=+..++..|.++|.| ..+..+ ..|+..+
T Consensus 218 ~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti 297 (335)
T KOG2922|consen 218 NNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTI 297 (335)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHh
Confidence 2233455566555555444443333334677765444444 34455677888889999974 444444 4566777
Q ss_pred HHhhHhhhhc
Q 044951 363 LFAGIFFARA 372 (375)
Q Consensus 363 l~G~~ly~~~ 372 (375)
+.|+.+.+..
T Consensus 298 ~~G~flL~~~ 307 (335)
T KOG2922|consen 298 FLGIFLLHRT 307 (335)
T ss_pred hheeeEeeee
Confidence 7777765443
No 72
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.21 E-value=0.0098 Score=56.25 Aligned_cols=138 Identities=14% Similarity=0.196 Sum_probs=89.2
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHH---HHHHHHHHHHHHHHHhhCCccccccCH--HHHHH
Q 044951 70 HGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLM---FYQNLISTLVVAVFGFFGAVSVEKLNW--KLIKL 144 (375)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~---~~q~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~ 144 (375)
+...+....+.+..+|+..+ ++.|+.+.+ .|..-.+. .+.++++.+.+.++.+. +.++.+| +....
T Consensus 165 ~~i~GDll~l~~a~lya~~n----V~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~---~i~~~~w~~~~~~~ 235 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSN----VLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILERS---GIESIHWTSQVIGL 235 (334)
T ss_pred ccchhHHHHHHHHHHHHHHH----HHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehh---hhhccCCChhhHHH
Confidence 44566777888888999885 466888774 34222222 23333433333332222 2333333 22222
Q ss_pred HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951 145 WIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD 216 (375)
Q Consensus 145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~ 216 (375)
+...++.......+....++..++.+..+--.++.++.++++.+++|+++++.-+++.+++++|.++....+
T Consensus 236 ~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 236 LVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 222233333333344567888888888888889999999999999999999999999999999999887654
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.08 E-value=0.025 Score=46.51 Aligned_cols=131 Identities=13% Similarity=0.166 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951 224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT 303 (375)
Q Consensus 224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (375)
.++++.+..+.+++.....|+-++. -+++...+.+...+...+.......++. .. ....... | ...
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~--------gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~---~~~~~~p-~-w~~ 68 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKAL--------GSPLVASFISFGVGFILLLIILLITGRP-SL---ASLSSVP-W-WAY 68 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHHHHhccc-cc---chhccCC-h-HHh
Confidence 5677888888888888888875541 2488888888888888877776665543 21 1221111 1 234
Q ss_pred HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHh--hc---cCcCccchhhHHHHHHHhhHh
Q 044951 304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLV--LF---NVPLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~--~f---~e~~t~~~~iG~~l~l~G~~l 368 (375)
..|+++....++....+.+.++.+.......-.+...++=.. +| .+++++..++|.++.+.|+++
T Consensus 69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 588888888888888899999998888776655544443333 23 389999999999999999864
No 74
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.90 E-value=0.047 Score=48.75 Aligned_cols=126 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHH-HHHHHHHhHh
Q 044951 84 AYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIF-IGMLVSGMYS 162 (375)
Q Consensus 84 ~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a 162 (375)
.-+.++....+..|.+-+ .-+ ...-+..-+.++.++...+..... ...-+++.....-+.++++. .+-..+...+
T Consensus 155 ~AG~~Wa~YIv~G~r~g~--~~~-g~~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiA 230 (292)
T COG5006 155 GAGACWALYIVLGQRAGR--AEH-GTAGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIA 230 (292)
T ss_pred HHhHHHHHHHHHcchhcc--cCC-CchHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHH
Confidence 334444444666666653 223 233456677777777766543221 11112222233333334433 3446788899
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951 163 LKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS 213 (375)
Q Consensus 163 l~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~ 213 (375)
++.+|...+.++-++.|.+-++.++++++|.++..+|+++..++.+++-..
T Consensus 231 L~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 231 LRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred HhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999988876443
No 75
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.74 E-value=0.015 Score=44.25 Aligned_cols=58 Identities=9% Similarity=0.104 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhHhhcccchhHHHH-HHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 044951 148 VNLIFIGMLVSGMYSLKYINIAMVTI-LKNMTNILTAVGELYMFRKRQNQKVWTAMFLM 205 (375)
Q Consensus 148 ~~~~~~~~~~~~~~al~~~~vs~~~i-l~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~ 205 (375)
.-.++....++...+++++|++.+-. ......+.+.+.+.+++||+.++.+++++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34478888899999999999998754 46699999999999999999999999998763
No 76
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.74 E-value=0.0062 Score=55.24 Aligned_cols=73 Identities=11% Similarity=0.141 Sum_probs=67.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 300 VAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
......+++-.+.|...|..+++.+|.+..+....|.+.+.++++++++.+++..||+++++.+.|+.+....
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence 4567888888888999999999999999999999999999999999999999999999999999999886553
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.62 E-value=0.013 Score=46.17 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=49.6
Q ss_pred HHHHHHHHHHH-HHhhccCch-hHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 307 FLGLAISFTSM-WFLQQTGPT-TYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 307 ~~~~~~~~~~~-~~l~~~s~~-t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
+.++.+.+..+ ..+++.+-. .+++..-+..+.+++.|+++|||++++.+++|+.+++.|++.-+..
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 33444444433 456666433 4556666788999999999999999999999999999999987653
No 78
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.55 E-value=0.079 Score=48.37 Aligned_cols=68 Identities=16% Similarity=0.258 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHH----HHHHHHHHhH
Q 044951 143 KLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWT----AMFLMIISAV 210 (375)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~----~l~l~~~Gv~ 210 (375)
+.=...|+++...+.+...|.+...++.+-.+.++.++...+.+.+++||+-+++++. +++++++|.+
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 3446678888888999999999999999999999999999999999999998887664 4444445543
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.48 E-value=0.018 Score=44.61 Aligned_cols=55 Identities=18% Similarity=0.263 Sum_probs=46.9
Q ss_pred HHhhccC-chhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 318 WFLQQTG-PTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 318 ~~l~~~s-~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
+.+|+.+ .+.+++..-.-.+.+.+.|+++|||++++.+++|+.+++.|++.-+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4566653 345788888889999999999999999999999999999999987654
No 80
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.34 E-value=0.022 Score=45.49 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=47.9
Q ss_pred HHHHHHHHHH-HHhhccCc-hhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 308 LGLAISFTSM-WFLQQTGP-TTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 308 ~~~~~~~~~~-~~l~~~s~-~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
..+...+..+ +.+++.+. +.+++..-+-.+.+++.|+++|||++|+.+++|+++++.|++.-+..
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 3333333333 45665543 34555566788899999999999999999999999999999887653
No 81
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.25 E-value=0.11 Score=40.80 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=45.0
Q ss_pred HHhhccC-chhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 318 WFLQQTG-PTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 318 ~~l~~~s-~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
..+|+.+ .+.+++..-+-.+.+++.|+++|||++++.+++|+.+++.|++.-+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4566654 3457778888889999999999999999999999999999998754
No 82
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.22 E-value=0.086 Score=41.05 Aligned_cols=55 Identities=16% Similarity=0.297 Sum_probs=46.6
Q ss_pred HHhhccC-chhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 318 WFLQQTG-PTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 318 ~~l~~~s-~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
..+++.+ .+.+++..-+-.+.+++.|+++|||++++.+++|+.+++.|++.-+..
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 4566554 346788888899999999999999999999999999999999886543
No 83
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.05 E-value=0.0027 Score=56.78 Aligned_cols=69 Identities=10% Similarity=0.160 Sum_probs=57.3
Q ss_pred HHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 302 ATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 302 l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
+++=|+.++...+..|+..++.|-.-+++.....|+++++++|++++|+.|..+.+|..+.+.|+++..
T Consensus 100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 344555555555666677777777778888999999999999999999999999999999999998754
No 84
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.93 E-value=0.024 Score=44.62 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 142 IKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
++...|..+- ......+++.+...++|.+.-+ .+++-+||++.++++.+|..+++.++++++++.|+.+.
T Consensus 42 ~~y~ipf~lN-q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLN-QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 4445555543 3445566778889999988777 59999999999988888888999999999999998764
No 85
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.45 E-value=0.83 Score=37.51 Aligned_cols=116 Identities=12% Similarity=0.068 Sum_probs=76.0
Q ss_pred HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCc-cccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHH
Q 044951 93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAV-SVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMV 171 (375)
Q Consensus 93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~ 171 (375)
..+|-.+-+..+ .|+.-+++-+..+.+.+.++...... +.+..+.-.++ ....|++-.....+...+...+.++..
T Consensus 17 ~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~ 93 (138)
T PF04657_consen 17 AAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALT 93 (138)
T ss_pred HHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHH
Confidence 445555444333 37777888888887776655443322 22222111233 333567777888888899999998877
Q ss_pred HHH-HHHHHHHHHHHHHH----HhcccccHHHHHHHHHHHHHhHh
Q 044951 172 TIL-KNMTNILTAVGELY----MFRKRQNQKVWTAMFLMIISAVS 211 (375)
Q Consensus 172 ~il-~~~~pvfv~l~~~~----~~~~~~~~~~~~~l~l~~~Gv~l 211 (375)
+.+ -.-+.+..++++.+ .-|+++++++.++++++++|+.+
T Consensus 94 ~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 94 TILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 766 44566666677765 35678999999999999999864
No 86
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.40 E-value=0.56 Score=44.12 Aligned_cols=115 Identities=13% Similarity=0.201 Sum_probs=83.7
Q ss_pred CCCCchhHHHHHhhhHHHHHHHHHHHhhh---hhHh-Hhc--CcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhH
Q 044951 255 GSLNEVSMVLLNNLLSLPFAMFLILIFDE---WRYV-MNT--GVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTY 328 (375)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~ 328 (375)
.+..+.+..+....+-.++.....+. ++ ++.. ... .-+..+..-.-+...+++-.+-|...|..+.+.+|.|+
T Consensus 43 ~~f~~tt~v~~~Ei~Kl~~c~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaaty 121 (345)
T KOG2234|consen 43 PMFLPTTAVFLTEVIKLVFCLFLLLF-EERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATY 121 (345)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHH-HhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhh
Confidence 34667777777777766666554443 32 1111 111 11222322245566667777778777788999999999
Q ss_pred hHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 329 SLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 329 si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
++...+|-..+.+++++++++.++..||...++-++|+.+-+
T Consensus 122 qVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 122 QVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998866
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.26 E-value=0.27 Score=46.68 Aligned_cols=135 Identities=10% Similarity=0.060 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHH--HHHHH---HHHhhhhhHhHhcCcchh
Q 044951 221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLP--FAMFL---ILIFDEWRYVMNTGVIEL 295 (375)
Q Consensus 221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~---~~~~~~~~~~~~~~~~~~ 295 (375)
..|+++.+++++|++.+.+-.||. + --+|+..+. ..++. +..|+ .+..++..+. ..+. +
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k----------~w~wE~~W~--v~gi~~wl~~~~~~g~~~~~~f~~~--~~~~-~ 69 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-K----------KWSWETMWS--VGGIFSWLILPWLIAALLLPDFWAY--YSSF-S 69 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-C----------CCchhHHHH--HHHHHHHHHHHHHHHHHHhhhHHHH--HHhc-C
Confidence 479999999999999988877763 1 234444422 11111 11121 1111122211 1122 3
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHHhhccCch-hHhHHHhhhhHHHHHhHHhhccCcC-------ccchhhHHHHHHHhhH
Q 044951 296 PMFWVAATASGFLGLAISFTSMWFLQQTGPT-TYSLVGSLNKIPISLAGLVLFNVPL-------SVPNMFSILFGLFAGI 367 (375)
Q Consensus 296 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~-t~si~~~~~~v~~i~~~~~~f~e~~-------t~~~~iG~~l~l~G~~ 367 (375)
+..+..-.++|++.-.-+...+..+++.+.. +..+..-+.-+..++++.+++||-. ....++|+++++.|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 4445566778888777777777777777554 3444456678889999999998533 3457889999999999
Q ss_pred hhhh
Q 044951 368 FFAR 371 (375)
Q Consensus 368 ly~~ 371 (375)
+-.+
T Consensus 150 l~s~ 153 (345)
T PRK13499 150 IVGR 153 (345)
T ss_pred HHHH
Confidence 8776
No 88
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.22 E-value=0.27 Score=43.71 Aligned_cols=62 Identities=11% Similarity=0.247 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHh
Q 044951 150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS 211 (375)
Q Consensus 150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l 211 (375)
+.......+-.+.+++.+..+.++...+.++++.+++.++++++++..++.+..+.+.|+.+
T Consensus 160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 44455556677889999999999999999999999999999999999999999999988653
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.77 E-value=0.1 Score=39.74 Aligned_cols=54 Identities=22% Similarity=0.381 Sum_probs=28.4
Q ss_pred HHHHHHHHH-HHhhccCchh-HhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHH
Q 044951 309 GLAISFTSM-WFLQQTGPTT-YSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFG 362 (375)
Q Consensus 309 ~~~~~~~~~-~~l~~~s~~t-~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~ 362 (375)
++..++..+ +.+++.+... +.+..-+..+.+.+.|+++|||++|+.+++|++++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 444444433 5677765443 45666678899999999999999999999999875
No 90
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.51 E-value=0.28 Score=45.97 Aligned_cols=115 Identities=14% Similarity=0.200 Sum_probs=76.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHH
Q 044951 221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWV 300 (375)
Q Consensus 221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (375)
..|..+++.++++.+....+.||-..+.++. +...-+. .. +.+.++..|.
T Consensus 6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~----~~~~~~~--------------------~~------~~l~~~~W~~ 55 (300)
T PF05653_consen 6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG----SLRAGSG--------------------GR------SYLRRPLWWI 55 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----cccccch--------------------hh------HHHhhHHHHH
Confidence 5799999999999999998888876543210 0110000 00 0011122233
Q ss_pred HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
.++.. .++...++. .+...+++..+..+.+.-+...+++..+++|+++..++.|.++++.|..+-
T Consensus 56 G~~~~-~~g~~~~~~---Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 56 GLLLM-VLGEILNFV---ALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHHHH-hcchHHHHH---HHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 33222 234334433 445556777888899999999999999999999999999999999998753
No 91
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.45 E-value=0.22 Score=47.12 Aligned_cols=141 Identities=15% Similarity=0.092 Sum_probs=92.6
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHhhcc--CCChhHHHHHHHHHHHHHHHH----HHHhhCCccccccCHHHHHHH
Q 044951 72 PAVKSGPLISGTAYCISSCSMTLLNKVVLSTY--NFNAGISLMFYQNLISTLVVA----VFGFFGAVSVEKLNWKLIKLW 145 (375)
Q Consensus 72 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~--~f~~p~~l~~~q~~~~~l~l~----~~~~~~~~~~~~~~~~~~~~~ 145 (375)
..+.+.+++.+++|++-. ++-|.=.++. +.+-|.++.++- ++..++++ ++...+..+++-++..+...+
T Consensus 246 llG~llaL~sA~~YavY~----vllk~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v 320 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYT----VLLKRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEERFELPSSTQFSLV 320 (416)
T ss_pred hHHHHHHHHHHHHHHHHH----HHHHhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence 344555666777777663 3335544544 456666665544 22333333 233333322222222233333
Q ss_pred HHHH-HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc
Q 044951 146 IPVN-LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL 217 (375)
Q Consensus 146 ~~~~-~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~ 217 (375)
+..+ +...+.=+++.+|.-.++.-..++--+.+.+..++...++.++++++..++|.+++++|-+++...+.
T Consensus 321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 3333 34567788888999999988999999999999999999999999999999999999999988877543
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=94.34 E-value=0.14 Score=47.98 Aligned_cols=134 Identities=14% Similarity=0.144 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh--ccCCChhHHHHHHHHHHHHHHHH-HHHhh--CCcc----ccccCHHHHHHHHHHH
Q 044951 79 LISGTAYCISSCSMTLLNKVVLS--TYNFNAGISLMFYQNLISTLVVA-VFGFF--GAVS----VEKLNWKLIKLWIPVN 149 (375)
Q Consensus 79 ~~~~~~~~~~s~~~~~~nK~~l~--~~~f~~p~~l~~~q~~~~~l~l~-~~~~~--~~~~----~~~~~~~~~~~~~~~~ 149 (375)
...+..+......-.++.|.++. ++..+ ++.+...+.-++...+. ++... +... ....+.. ...+...+
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s 242 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNS 242 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHH
Confidence 34444455555555677788884 45677 67777777667766666 33222 2111 1122222 33344445
Q ss_pred HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951 150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214 (375)
Q Consensus 150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~ 214 (375)
++..+.+...+..+..++.=++++.....-+++...++++++++.++.+.+|.+++++|+.+-..
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 77778888999999999999999999999999999999999999999999999999999987643
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.28 E-value=1.9 Score=35.76 Aligned_cols=140 Identities=19% Similarity=0.203 Sum_probs=86.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHH
Q 044951 221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWV 300 (375)
Q Consensus 221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (375)
+..++.++++..+...+.-...|+.+.. -+|.-..+.+...+...++.+....++.... + ...+.| |
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~--------~spl~As~isf~vGt~~L~~l~l~~~~~~~~-a-~~~~~p--w- 70 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYL--------GSPLLASLISFLVGTVLLLILLLIKQGHPGL-A-AVASAP--W- 70 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHc--------CChHHHHHHHHHHHHHHHHHHHHHhcCCCch-h-hccCCc--h-
Confidence 3456778888888888888887776542 2466666666667776666655543322211 1 011112 2
Q ss_pred HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhH-HHHHhHHh-hcc---CcCccchhhHHHHHHHhhHhhhhcc
Q 044951 301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKI-PISLAGLV-LFN---VPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v-~~i~~~~~-~f~---e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
.....|+++...-.+......+.++++...+...-.. .+.++.-. .|| .+++...++|+++++.|+++....+
T Consensus 71 W~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 71 WAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred HHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 2345667777766776677888888766665544333 33333322 122 7899999999999999966655544
No 94
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.82 E-value=2.6 Score=37.16 Aligned_cols=126 Identities=18% Similarity=0.288 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCcccc----ccCHHHHHHHHHHHHHHHHH
Q 044951 81 SGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVSVE----KLNWKLIKLWIPVNLIFIGM 155 (375)
Q Consensus 81 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~ 155 (375)
+...-+.++....+.-|...+-.+|. -...+++..+++..++..+... ...... .++-.....++.-|++-.+.
T Consensus 159 Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgi 237 (309)
T COG5070 159 WMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGI 237 (309)
T ss_pred EEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhh
Confidence 33344555555555555555444565 4567788888888877766543 111111 22333455566777888888
Q ss_pred HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 044951 156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMII 207 (375)
Q Consensus 156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~ 207 (375)
.++.-++++.++...+.|..++.-...++.+.++++++.++..+.++++++.
T Consensus 238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988877755443
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.15 E-value=3.7 Score=37.97 Aligned_cols=118 Identities=12% Similarity=0.154 Sum_probs=74.1
Q ss_pred HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-C-C---ccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccc
Q 044951 93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-G-A---VSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYIN 167 (375)
Q Consensus 93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 167 (375)
+...+.++..++.. ++.+++.-.++..+.-...... + . .++-+..++-++.++..+.+-+..+.+-++-++.-.
T Consensus 188 n~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FG 266 (327)
T KOG1581|consen 188 NATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFG 266 (327)
T ss_pred HhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcc
Confidence 44567777766555 4555544444433333222111 1 0 112222345677888888888777776666666544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHh
Q 044951 168 IAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS 211 (375)
Q Consensus 168 vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l 211 (375)
.=+.+++.-+-=++..+++.+.++.+.++.+|.++.+.+.|..+
T Consensus 267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 44455566667788889999999999999999998877777544
No 96
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=89.46 E-value=1.1 Score=35.37 Aligned_cols=50 Identities=16% Similarity=0.105 Sum_probs=39.8
Q ss_pred HhhccCchhHhHH-HhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951 319 FLQQTGPTTYSLV-GSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 319 ~l~~~s~~t~si~-~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l 368 (375)
.+++.+-+.+..+ +.+.-+++.+.|+++.+|..+...++|+.+++.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 4555554444444 5778899999999999999999999999999999865
No 97
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=89.15 E-value=0.6 Score=42.40 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHH
Q 044951 223 GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAA 302 (375)
Q Consensus 223 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (375)
|++-+++|+++++.+-+=.||.- .-|++-.+++++...........+..+. +. ++...
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~----------~gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~-----f~p~a 58 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD----------TGDGFFFQWVMCSGIFLVGLVVNLILGF-------PP-----FYPWA 58 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc----------CCCcHHHHHHHHHHHHHHHHHHHHhcCC-------Cc-----ceeHH
Confidence 56778888888888777666542 2577777777765555555544433221 11 11233
Q ss_pred HHHhHHHHHHHHHHHHHhhccCc-hhHhHHHhhhhHHHHHhHHh-hccC-----cCccchhhHHHHHHHhhHhhhhccc
Q 044951 303 TASGFLGLAISFTSMWFLQQTGP-TTYSLVGSLNKIPISLAGLV-LFNV-----PLSVPNMFSILFGLFAGIFFARAKM 374 (375)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~s~-~t~si~~~~~~v~~i~~~~~-~f~e-----~~t~~~~iG~~l~l~G~~ly~~~k~ 374 (375)
.+.|.+....|....-+++..+= .-..+.+...-+..-..|-+ +||. .-...+++|++++++|..+|...|.
T Consensus 59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecC
Confidence 45555555555555555555441 12333333344444443322 5553 2456799999999999999988764
No 98
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.69 E-value=4.3 Score=37.79 Aligned_cols=134 Identities=17% Similarity=0.251 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHh-hCCcc-----ccccCHHHHHHHHHHH-HH
Q 044951 79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGF-FGAVS-----VEKLNWKLIKLWIPVN-LI 151 (375)
Q Consensus 79 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~-~~~~~-----~~~~~~~~~~~~~~~~-~~ 151 (375)
.......+.+.....++.|...+.-++. -+.+.++..+.+.+.+.++.. .+..+ .+..........+.++ ++
T Consensus 159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~ 237 (314)
T KOG1444|consen 159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVM 237 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHH
Confidence 4455566666666777888888766665 355667777777666655543 23211 1111111222333444 45
Q ss_pred HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS 213 (375)
Q Consensus 152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~ 213 (375)
-.+..++..++.+..++.+++++....-..+.+...++.+++.++....|+.+.++|.++-.
T Consensus 238 gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 238 GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 56778899999999999999999977777777777777778888888888888877766543
No 99
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=86.52 E-value=0.66 Score=39.97 Aligned_cols=64 Identities=8% Similarity=0.086 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951 309 GLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 309 ~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~ 372 (375)
....+|....++++.||+.++-...-+..+.-+++|++++|.+....++..++.+.|++..+|.
T Consensus 63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 3445777678899999999999999999999999999999999999999999999999887654
No 100
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.40 E-value=18 Score=30.08 Aligned_cols=126 Identities=8% Similarity=-0.018 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccC--HHHHHHHHHHHHHHHHHHHHHhH
Q 044951 84 AYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLN--WKLIKLWIPVNLIFIGMLVSGMY 161 (375)
Q Consensus 84 ~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 161 (375)
+=+.......-.|-.+-.. ...|+.-.+..+.++..++......+. +.++.. ++..+-.+..|++-......+..
T Consensus 12 ~aG~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~ 88 (150)
T COG3238 12 LAGALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAWIGGLLGAIFVTSSIL 88 (150)
T ss_pred HHhhhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHHHccchhhhhhhhhHH
Confidence 3333433344455555432 345777778888887666655444321 222211 22122223333444444555555
Q ss_pred hhcccchhHHHH-HHHHHHHHHHHHHHHHh----cccccHHHHHHHHHHHHHhHhh
Q 044951 162 SLKYINIAMVTI-LKNMTNILTAVGELYMF----RKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 162 al~~~~vs~~~i-l~~~~pvfv~l~~~~~~----~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
....+.++..++ ..+-+.+.-++++.+=. ++++++.++++++++++|+.++
T Consensus 89 l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 89 LAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 566666555444 46667677777765543 3679999999999999995554
No 101
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=84.26 E-value=0.16 Score=45.22 Aligned_cols=73 Identities=16% Similarity=0.229 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHH----HHHHHHHhHh
Q 044951 139 WKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTA----MFLMIISAVS 211 (375)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~----l~l~~~Gv~l 211 (375)
.|+.+.-...|+..+..+.+...|-+...+++.-.+..+..+...+...+++|||-+++++.. +++++.|..+
T Consensus 206 ~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 206 NKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 344444555677777777777788888888877777888888888999999999999887644 4444444444
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=80.19 E-value=6.6 Score=35.00 Aligned_cols=67 Identities=16% Similarity=0.137 Sum_probs=54.0
Q ss_pred HHHHHHHHH-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951 307 FLGLAISFT-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 307 ~~~~~~~~~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k 373 (375)
-.+++.++. +..+++...=-|..+.-.-||+..+++|+++.+..-++....-..++++|++++-|..
T Consensus 92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~ 159 (337)
T KOG1580|consen 92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKE 159 (337)
T ss_pred HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccc
Confidence 344554444 3567777766666666788999999999999999999999999999999999987764
No 103
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=68.02 E-value=93 Score=29.57 Aligned_cols=24 Identities=13% Similarity=0.387 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q 044951 221 TKGYAWQIVNCILTASYSLTLRRV 244 (375)
Q Consensus 221 ~~G~~~~l~s~~~~a~~~i~~k~~ 244 (375)
..|+++..+++++.+.+.+=.||+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv 29 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV 29 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc
Confidence 479999999999999988877775
No 104
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=65.84 E-value=1.3e+02 Score=28.73 Aligned_cols=106 Identities=8% Similarity=0.123 Sum_probs=67.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhc-------ccccHHHHHHHHHHHHHh
Q 044951 138 NWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFR-------KRQNQKVWTAMFLMIISA 209 (375)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~-------~~~~~~~~~~l~l~~~Gv 209 (375)
+.+.+......|++.......+-.+.+|+.+|..+-+ .-+..++=.++-.++.+ ++-.....+++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 3345555566677777777777788888777754432 22222222233223322 333457889999999999
Q ss_pred Hhhccc----c-------cccc-hhhHHHHHHHHHHHHHHHHHHHH
Q 044951 210 VSGSIT----D-------LSFD-TKGYAWQIVNCILTASYSLTLRR 243 (375)
Q Consensus 210 ~l~~~~----~-------~~~~-~~G~~~~l~s~~~~a~~~i~~k~ 243 (375)
++.+.. | .+++ ..|++.++++.+..|+++.-...
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a 194 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA 194 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence 987642 1 1233 36999999999999999886543
No 105
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=63.65 E-value=10 Score=29.19 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhhcccchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 143 KLWIPVNLIFIGMLVSGMYSLKYINIAMVT-ILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~al~~~~vs~~~-il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
..++|..+-.++ ..+++.-++..|++.+. +..+++-.|+++.+..+.-|.+..+.+++..++++|+.+.
T Consensus 54 ~Y~iPFllNqcg-Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 54 EYLIPFLLNQCG-SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHhh-HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 344555554444 34455567777766554 4467788999999976655668888889999999998764
No 106
>PRK02237 hypothetical protein; Provisional
Probab=63.44 E-value=17 Score=28.28 Aligned_cols=45 Identities=13% Similarity=-0.037 Sum_probs=37.7
Q ss_pred hHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 327 TYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 327 t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
.++..|-+--+.+++.+|.+-|..++..+++|..+++.|+..--+
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 456666667788889999999999999999999999999866433
No 107
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.31 E-value=18 Score=28.04 Aligned_cols=45 Identities=13% Similarity=0.053 Sum_probs=38.3
Q ss_pred hHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 327 TYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 327 t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
.++..+-+--+.+.+.+|.+-+++++..+++|..+++.|+..--+
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 456666777888999999999999999999999999999876543
No 108
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=57.50 E-value=3.1 Score=37.49 Aligned_cols=67 Identities=7% Similarity=0.101 Sum_probs=56.2
Q ss_pred HHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951 303 TASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF 369 (375)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly 369 (375)
+..+++-.-.||....+-++++-+..+....-..+...+++|++++..-.+.++.|.++|++|++..
T Consensus 82 illa~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 82 ILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred hheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEE
Confidence 4444544455666667788999999999999999999999999999999999999999999998764
No 109
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=55.63 E-value=86 Score=29.01 Aligned_cols=53 Identities=15% Similarity=0.202 Sum_probs=43.1
Q ss_pred HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951 318 WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA 370 (375)
Q Consensus 318 ~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~ 370 (375)
-.+..|+++...+.-----+++-+++..+++..++..+|.|+..+..|.+...
T Consensus 105 vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 105 VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 34556677777776666678888999999999999999999999999987643
No 110
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=50.93 E-value=9 Score=35.80 Aligned_cols=115 Identities=11% Similarity=0.212 Sum_probs=73.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951 220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW 299 (375)
Q Consensus 220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
+..|.++++.+++.-+...++.||-..+..+.....+-++. . -...+..|
T Consensus 19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~------------------------~------yl~~~~Ww 68 (335)
T KOG2922|consen 19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGY------------------------G------YLKEPLWW 68 (335)
T ss_pred ceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCc------------------------c------hhhhHHHH
Confidence 46788899998888888777777766553321110011111 0 01122223
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951 300 VAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l 368 (375)
..++.. .+|=..||..|. ..+++-.+.+|.+.-+...+++..+++|.++....+|++++++|..+
T Consensus 69 ~G~ltm-~vGei~NFaAYa---FAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~ 133 (335)
T KOG2922|consen 69 AGMLTM-IVGEIANFAAYA---FAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTT 133 (335)
T ss_pred HHHHHH-HHHhHhhHHHHh---hchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEE
Confidence 333333 345555665542 23355667778888899999999999999999999999999999754
No 111
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=46.51 E-value=4e+02 Score=28.59 Aligned_cols=43 Identities=16% Similarity=0.181 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 170 MVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 170 ~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
-+.++..+.|+-++.++.....+|.+...+.+.+-.++|.+-+
T Consensus 12 Ra~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 12 RAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 3456777889999988888776775444455555566665443
No 112
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.37 E-value=1.3e+02 Score=23.04 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=0.0
Q ss_pred HHHHhHHHHHHHHHHHHHhh---ccCchhHhHHH--hhhhHHHHH----hHHhhccCcCccchhhHHHHHHHhhHh
Q 044951 302 ATASGFLGLAISFTSMWFLQ---QTGPTTYSLVG--SLNKIPISL----AGLVLFNVPLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 302 l~~~~~~~~~~~~~~~~~l~---~~s~~t~si~~--~~~~v~~i~----~~~~~f~e~~t~~~~iG~~l~l~G~~l 368 (375)
++...+.+..+++..|...- |++-...+... .+++|++.. +++..++|++.+..+.|..+++.|+.+
T Consensus 37 l~~~i~~SWGIA~fEY~LqvPaNRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 37 LVIVILASWGIAFFEYLLQVPANRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred hhHHHHHHhhHHHHHHHHhCccchhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.87 E-value=50 Score=25.60 Aligned_cols=40 Identities=5% Similarity=0.039 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 176 NMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 176 ~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
....+...+-.+.+.|++|++..+++..++++|+.++.+.
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3444555667778889999999999999999999887654
No 114
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=40.54 E-value=2.4e+02 Score=26.05 Aligned_cols=50 Identities=8% Similarity=0.113 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc
Q 044951 168 IAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL 217 (375)
Q Consensus 168 vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~ 217 (375)
+..+.++...--..+.+++++++.++.+..-..+..+++.|+++-.+.+.
T Consensus 286 A~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 286 ALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred hhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 33333444444456688999999999999999999999999998777653
No 115
>PRK02237 hypothetical protein; Provisional
Probab=38.96 E-value=1.9e+02 Score=22.59 Aligned_cols=39 Identities=5% Similarity=-0.051 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 177 MTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 177 ~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
...+...+-.+.+.|+||++..+++..++++|+.++.+.
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 344444566778889999999999999999999887554
No 116
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=38.79 E-value=29 Score=26.80 Aligned_cols=28 Identities=18% Similarity=0.127 Sum_probs=24.0
Q ss_pred HHhHHhhccCcCccchhhHHHHHHHhhH
Q 044951 340 SLAGLVLFNVPLSVPNMFSILFGLFAGI 367 (375)
Q Consensus 340 i~~~~~~f~e~~t~~~~iG~~l~l~G~~ 367 (375)
+.+++++++|++++..+.|.++++.++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 4577888999999999999999887764
No 117
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=37.21 E-value=4.4e+02 Score=26.39 Aligned_cols=78 Identities=4% Similarity=0.009 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--ccccHHHHHHHHHHHHHhHhhc---ccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 044951 171 VTILKNMTNILTAVGELYMFR--KRQNQKVWTAMFLMIISAVSGS---ITDLSFDTKGYAWQIVNCILTASYSLTLRRVM 245 (375)
Q Consensus 171 ~~il~~~~pvfv~l~~~~~~~--~~~~~~~~~~l~l~~~Gv~l~~---~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~ 245 (375)
.....+..-+++++++.++.. +.-++|+..-.+..++|++... .-+.+.-+.+.++.+++.+++....+...-.+
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444444443322 3334444444444444443321 11333336788889999999988777766655
Q ss_pred hhh
Q 044951 246 DKA 248 (375)
Q Consensus 246 ~~~ 248 (375)
++.
T Consensus 152 P~l 154 (477)
T PF11700_consen 152 PDL 154 (477)
T ss_pred Hhh
Confidence 543
No 118
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=35.02 E-value=72 Score=28.58 Aligned_cols=19 Identities=5% Similarity=0.018 Sum_probs=10.6
Q ss_pred cCccchhhHHHHHHHhhHh
Q 044951 350 PLSVPNMFSILFGLFAGIF 368 (375)
Q Consensus 350 ~~t~~~~iG~~l~l~G~~l 368 (375)
....+.|++-++++.|.++
T Consensus 218 y~n~q~wLwwi~~vlG~ll 236 (262)
T KOG4812|consen 218 YFNGQYWLWWIFLVLGLLL 236 (262)
T ss_pred ccccchHHHHHHHHHHHHH
Confidence 3444556666666666554
No 119
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=33.37 E-value=84 Score=24.29 Aligned_cols=44 Identities=11% Similarity=-0.083 Sum_probs=34.3
Q ss_pred HhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951 328 YSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR 371 (375)
Q Consensus 328 ~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~ 371 (375)
+.-.|-+--+.+....+++=+..++..+++|..+++.|+....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEe
Confidence 44455555677778888888999999999999999999765433
No 120
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.76 E-value=65 Score=29.69 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=50.0
Q ss_pred HHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-C----CccccccC-HHHHHHHHHHHHHHHHHHHHHhHhhcccc
Q 044951 94 LLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-G----AVSVEKLN-WKLIKLWIPVNLIFIGMLVSGMYSLKYIN 167 (375)
Q Consensus 94 ~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 167 (375)
++.|..+.. .-+.-+-++++..+.+.++..+...+ + ....++.. ++.|..+..-|++.....+...+=+|.++
T Consensus 202 iytkk~l~~-v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TS 280 (347)
T KOG1442|consen 202 IYTKKVLPP-VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTS 280 (347)
T ss_pred Hhhheeccc-ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecc
Confidence 456655542 12334667888888877766654433 2 12233442 33333333334443333333334444444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHH
Q 044951 168 IAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAM 202 (375)
Q Consensus 168 vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l 202 (375)
.=++.+-....-.---+++..+++|.-+..-|-+.
T Consensus 281 plThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn 315 (347)
T KOG1442|consen 281 PLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSN 315 (347)
T ss_pred cceeeecHhHHHHHHHHHHHHHHHHHhhhheeeee
Confidence 33332222222222234555666776655555443
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=32.70 E-value=2.4e+02 Score=21.94 Aligned_cols=60 Identities=8% Similarity=0.031 Sum_probs=35.8
Q ss_pred HHHHHHHhHhhcccchhHHHHHH-HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 153 IGMLVSGMYSLKYINIAMVTILK-NMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 153 ~~~~~~~~~al~~~~vs~~~il~-~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
++..-.+-.+.+.-+.+---+++ ..+....+.++.+++||++++....+-+.++.++.++
T Consensus 46 ~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 46 CLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 33333333444444444333332 2233334467888999999999999988887776543
No 122
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=32.34 E-value=3.4e+02 Score=25.42 Aligned_cols=50 Identities=14% Similarity=0.037 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 044951 198 VWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDK 247 (375)
Q Consensus 198 ~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~ 247 (375)
..+++++.+.|..++.+.+..+++.=.++.+++++..-...-+....++.
T Consensus 20 l~aai~Pv~~G~a~A~~~~~~f~~~~~ll~Li~~~~iq~~vN~~NdY~D~ 69 (303)
T COG1575 20 LPAAIAPVIVGTALAFWYGKSFNLLVALLALIAAILLQILVNLANDYFDY 69 (303)
T ss_pred hHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 34689999999999988777888777788888877766655555555553
No 123
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=26.29 E-value=3.3e+02 Score=25.69 Aligned_cols=53 Identities=8% Similarity=0.153 Sum_probs=34.0
Q ss_pred hHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951 160 MYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 160 ~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
+.=+..+++=+-++..-..-+.+.+++..+.+++.+...|+++.+...|+..-
T Consensus 261 flLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 261 FLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 33344444444444444555667777777888888888888887777776654
No 124
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.15 E-value=26 Score=32.19 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHhccc-ccHHHHHHHHHHHHHhHhhcccc--cccchhhHHHH---HHHHHHHHHHHHHH
Q 044951 169 AMVTILKNMTNILTAVG-ELYMFRKR-QNQKVWTAMFLMIISAVSGSITD--LSFDTKGYAWQ---IVNCILTASYSLTL 241 (375)
Q Consensus 169 s~~~il~~~~pvfv~l~-~~~~~~~~-~~~~~~~~l~l~~~Gv~l~~~~~--~~~~~~G~~~~---l~s~~~~a~~~i~~ 241 (375)
+..+++.+...+.+.++ -.++||+| .-+.-.+|++++++-..+...-. .+.-+.|+++. +.-++..-+|..+.
T Consensus 50 ~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym~lL 129 (381)
T PF05297_consen 50 GALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYMWLL 129 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555544444433 33446665 44455566666655544433321 12224565433 33344445565544
Q ss_pred HH
Q 044951 242 RR 243 (375)
Q Consensus 242 k~ 243 (375)
|+
T Consensus 130 r~ 131 (381)
T PF05297_consen 130 RE 131 (381)
T ss_dssp --
T ss_pred HH
Confidence 44
No 125
>PLN02776 prenyltransferase
Probab=24.05 E-value=6.4e+02 Score=24.10 Aligned_cols=35 Identities=23% Similarity=0.180 Sum_probs=25.6
Q ss_pred HhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccc
Q 044951 319 FLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVP 354 (375)
Q Consensus 319 ~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~ 354 (375)
.+||.++... ++|..--.+..+.||.--.+.+++.
T Consensus 118 ~lKR~t~~~~-~lG~~~Ga~ppL~Gw~Avtg~~~~~ 152 (341)
T PLN02776 118 PLKQIHPANT-WVGAVVGAIPPLMGWAAASGQLDAG 152 (341)
T ss_pred hHccCCchhH-HHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 3888888865 7777777677788888777766653
No 126
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=23.89 E-value=7.6e+02 Score=24.90 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHH----H--h--c-ccccHHHHHHHHHHHHHhHhh
Q 044951 172 TILKNMTNILTAVGELY----M--F--R-KRQNQKVWTAMFLMIISAVSG 212 (375)
Q Consensus 172 ~il~~~~pvfv~l~~~~----~--~--~-~~~~~~~~~~l~l~~~Gv~l~ 212 (375)
+-.++.+|+++.+++.+ + + + ++|+...-.++.+.+.|+...
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~ 360 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFC 360 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 34568888888876653 2 1 2 236666666777777776643
No 127
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=22.93 E-value=7.5e+02 Score=24.47 Aligned_cols=20 Identities=20% Similarity=0.306 Sum_probs=14.6
Q ss_pred chhhHHHHHHHhhHhhhhcc
Q 044951 354 PNMFSILFGLFAGIFFARAK 373 (375)
Q Consensus 354 ~~~iG~~l~l~G~~ly~~~k 373 (375)
....|.++.+.|..+|.+.+
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~ 436 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRAR 436 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45668888889988876543
No 128
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=22.41 E-value=1e+02 Score=23.77 Aligned_cols=38 Identities=5% Similarity=-0.080 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951 178 TNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT 215 (375)
Q Consensus 178 ~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~ 215 (375)
..+...+-.++.-|++|++..+.+..+.++|+.++.++
T Consensus 68 yI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 68 YIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 33444556667788999999999999999998877654
No 129
>PF03303 WTF: WTF protein; InterPro: IPR004982 This is a family of mainly hypothetical Schizosacchoromyces pombe proteins that are often encoded near long terminal repeats within the genome. Their function is unknown but they contain several predicted transmembrane regions and at least one protein is up-regulated during meiosis []. Upregulation is also observed in histone deacetylase mutants, indicating their transcription is normally inhibited by hypoacetylation [].
Probab=21.05 E-value=6.1e+02 Score=22.74 Aligned_cols=14 Identities=14% Similarity=0.285 Sum_probs=9.5
Q ss_pred HHHHHHHhhccCCC
Q 044951 93 TLLNKVVLSTYNFN 106 (375)
Q Consensus 93 ~~~nK~~l~~~~f~ 106 (375)
.-+.|..+.++++.
T Consensus 109 l~~k~a~F~~~~~~ 122 (247)
T PF03303_consen 109 LPYKDASFKDYGFM 122 (247)
T ss_pred HHHHHHHHHhhhhh
Confidence 34677778766665
No 130
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=20.24 E-value=87 Score=22.03 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=15.2
Q ss_pred chhhHHHHHHHhhHhhhhc
Q 044951 354 PNMFSILFGLFAGIFFARA 372 (375)
Q Consensus 354 ~~~iG~~l~l~G~~ly~~~ 372 (375)
.-++++++++.|.++|...
T Consensus 5 ~iLi~ICVaii~lIlY~iY 23 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3578999999999998643
Done!