BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044955
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
Length = 481
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 20/233 (8%)
Query: 5 LHQIKQIKDNLGATLNDVITGTIFLGIRLYMQAVNQEST--------NLHSTAVVLLNTR 56
+K IKD + +NDV+ G G+ Y+ + ST L V +N R
Sbjct: 245 FEDVKLIKDTMNMKVNDVLLGMTQAGLSRYLSSKYDGSTAEKKKILEKLRVRGAVAINLR 304
Query: 57 MFKSISSIKEMVKPDSKAPWGNHFAFLHISVPQLTNAEVQNPLKFIQKAQEIIQSKRSSF 116
I + +M+ SK WGN + P +E ++PL++I++A+ + K+ S
Sbjct: 305 PATKIEDLADMMAKGSKCRWGNFIG--TVIFPLWVKSE-KDPLEYIRRAKATMDRKKISL 361
Query: 117 GAYLTAKLLETVKKLRGHETAAKFIHGSLNNSSLAITNMMGPVEKMALANHPIKGLYFMV 176
A+ +++ K G + F ++SLA +N+ GP E+++ +HPI +
Sbjct: 362 EAFFFYGIIKFTLKFFGGKAVEAFGKRIFGHTSLAFSNVKGPDEEISFFHHPIS----YI 417
Query: 177 AGS----PQSLVVTIVTYMGNLRVSLGAEEGFIDSP-KLKSCIENAFEMILDA 224
AGS Q+L + ++Y+ + ++L + I P +L + A E+I A
Sbjct: 418 AGSALVGAQALNIHFISYVDKIVINLAVDTTTIQDPNRLCDDMVEALEIIKSA 470
>sp|P67209|Y3115_MYCBO Putative diacyglycerol O-acyltransferase Mb3115 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3115 PE=3
SV=1
Length = 474
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 31/239 (12%)
Query: 3 FPLHQIKQIKDNLGATLNDVITGTIFLGIRLYMQAVNQESTNLHSTAVVLLNTRMFKSIS 62
PL +K + G ++NDV+ I + Y+ A +Q ST+ A + +
Sbjct: 253 LPLADVKALAKATGTSVNDVVMTVIDDALHHYL-AEHQASTDRPLVAFMPM--------- 302
Query: 63 SIKEMVKPDSKAPWGNHFA--FLHISVPQLTNAEVQNPLKFIQKAQEIIQSKRSSFGAYL 120
S++E S GN + + + P+ + E LK I A ++K G
Sbjct: 303 SLRE----KSGEGGGNRVSAELVPMGAPKASPVER---LKEINAA--TTRAKDKGRGMQT 353
Query: 121 TAKLLETVKKLRGHETAAKFIH--GSLNNSSLAITNMMGPVEKMALANHPI---KGLYFM 175
T++ + L G T A + G L ++++ I+NM GP E++ LA P+ GL +
Sbjct: 354 TSRQAYALLLL-GSLTVADALPLLGKLPSANVVISNMKGPTEQLYLAGAPLVAFSGLPIV 412
Query: 176 VAGSPQSLVVTIVTYMGNLRVSLGAEEGFIDSP-KLKSCIENAF-EMILDAASATPSSS 232
G+ L VT + L +++GA + P +L ++ AF E+ +A + +P++S
Sbjct: 413 PPGA--GLNVTFASINTALCIAIGAAPEAVHEPSRLAELMQRAFTELQTEAGTTSPTTS 469
>sp|P67208|TGS4_MYCTU Probable diacyglycerol O-acyltransferase Tgs4 OS=Mycobacterium
tuberculosis GN=tgs4 PE=1 SV=1
Length = 474
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 31/239 (12%)
Query: 3 FPLHQIKQIKDNLGATLNDVITGTIFLGIRLYMQAVNQESTNLHSTAVVLLNTRMFKSIS 62
PL +K + G ++NDV+ I + Y+ A +Q ST+ A + +
Sbjct: 253 LPLADVKALAKATGTSVNDVVMTVIDDALHHYL-AEHQASTDRPLVAFMPM--------- 302
Query: 63 SIKEMVKPDSKAPWGNHFA--FLHISVPQLTNAEVQNPLKFIQKAQEIIQSKRSSFGAYL 120
S++E S GN + + + P+ + E LK I A ++K G
Sbjct: 303 SLRE----KSGEGGGNRVSAELVPMGAPKASPVER---LKEINAA--TTRAKDKGRGMQT 353
Query: 121 TAKLLETVKKLRGHETAAKFIH--GSLNNSSLAITNMMGPVEKMALANHPI---KGLYFM 175
T++ + L G T A + G L ++++ I+NM GP E++ LA P+ GL +
Sbjct: 354 TSRQAYALLLL-GSLTVADALPLLGKLPSANVVISNMKGPTEQLYLAGAPLVAFSGLPIV 412
Query: 176 VAGSPQSLVVTIVTYMGNLRVSLGAEEGFIDSP-KLKSCIENAF-EMILDAASATPSSS 232
G+ L VT + L +++GA + P +L ++ AF E+ +A + +P++S
Sbjct: 413 PPGA--GLNVTFASINTALCIAIGAAPEAVHEPSRLAELMQRAFTELQTEAGTTSPTTS 469
>sp|O53304|Y3087_MYCTU Putative diacyglycerol O-acyltransferase Rv3087/MT3172
OS=Mycobacterium tuberculosis GN=Rv3087 PE=1 SV=1
Length = 472
Score = 37.7 bits (86), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 73/174 (41%), Gaps = 29/174 (16%)
Query: 2 TFPLHQIKQIKDNLGATLNDVITGTIFLGIRLYMQAVNQESTNLHSTAVVLLNTRMFKSI 61
+FPL +++++ LG T+NDV + +R Y++ T+ + L ++
Sbjct: 247 SFPLAEVREVSKTLGVTINDVFLACVAGAVRRYLERCGSPPTDAMVATMPL-------AV 299
Query: 62 SSIKEMVKPDSKAPWGNHFAFLHISVPQLTNAEVQNPLKFIQKA--------QEIIQSKR 113
+ E P GN+ + ++ + A++ +PL+ + Q Q+K
Sbjct: 300 TPAAERAHP------GNYSSVDYVWL----RADIADPLERLHATHLAAEATKQHFAQTKD 349
Query: 114 SSFGAYLTAKLLETVKKLRGHETAAKFIHGSLNN-SSLAITNMMGPVEKMALAN 166
+ GA + +LL + + G A G + ++ ++N+ GP E L
Sbjct: 350 ADVGAVV--ELLPE-RLISGLARANARTKGRFDTFKNVVVSNVPGPREPRYLGR 400
>sp|Q97X13|ILVC3_SULSO Putative ketol-acid reductoisomerase 3 OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=ilvC3
PE=3 SV=1
Length = 332
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 33 LYMQAVNQESTNLHSTAVVLLNTRMFKSISSIKEMVKPDSKAPWGNHFA 81
++ Q V+ +T+ + T TRMFK +KE+VK ++K W FA
Sbjct: 246 IFNQMVHHSTTSQYGTL-----TRMFKYYDLVKEIVKDEAKYIWDGSFA 289
>sp|Q1WSV7|REX_LACS1 Redox-sensing transcriptional repressor rex OS=Lactobacillus
salivarius (strain UCC118) GN=rex PE=3 SV=1
Length = 213
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 1 MTFPLHQIKQIKDNLGATLNDVITGTIFLGIRLYMQAVNQESTNLHSTAVVLLNTRMFKS 60
+ F HQ ++ + +N+ ITGTI GI +Y + +E L +V+L +
Sbjct: 99 LNFNFHQSNHVRISAAFDVNEDITGTIQSGIPVYPMSDMKEQLKLQQIEIVILTVPAPVA 158
Query: 61 ISSIKEMVKPDSKAPWGNHFAFLHISVPQLTNAEVQN 97
E+V+ + +F L I+VP+ N VQN
Sbjct: 159 QKVTDELVEVGVRGIL--NFTPLRITVPE--NIRVQN 191
>sp|B3EL62|RPOC_CHLPB DNA-directed RNA polymerase subunit beta' OS=Chlorobium
phaeobacteroides (strain BS1) GN=rpoC PE=3 SV=1
Length = 1498
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 25 GTIFLGIRLYMQAVNQESTNLHSTAVVLLNTRMFKSISSIKEM-VKPDS--------KAP 75
G +F G M A N+E LH+ V + R+ + ++ + + PD K
Sbjct: 563 GKLFYGTEEVMIAFNEERIGLHALVFVHYDGRIEQKFDPLRMLDIIPDDQPEQKEWLKTK 622
Query: 76 WGNHFAFLHISVPQLTNAEVQNPLKFIQK------AQEIIQSKRSSFGAYLTAKLLETVK 129
G + + L N V + FI K A+++I S G TA+ L+ +K
Sbjct: 623 IGENKILVTTVGRVLFNRYVPEKIGFINKVIDKKGAKDLISKLSSEVGNVATAEFLDNIK 682
Query: 130 KLRGH 134
++ H
Sbjct: 683 QVGFH 687
>sp|Q9P778|DPP5_SCHPO Dipeptidyl-peptidase 5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC1711.12 PE=3 SV=1
Length = 683
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 53 LNTRMFKSISSIKEMVKPDSKAPWGNHFAFLHISVPQLTNAEVQ 96
LNTR KS+S+ K A GNH A+L + PQ + + Q
Sbjct: 256 LNTRNLKSLSTAKGACSSPRLAKDGNHIAWLEMQTPQYESDQNQ 299
>sp|Q8R5N8|HPRK_FUSNN Putative HPr kinase/phosphorylase OS=Fusobacterium nucleatum subsp.
nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 /
LMG 13131) GN=hprK PE=3 SV=1
Length = 615
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 98 PLKFIQKAQEIIQSKRSSFGAYLTAKLLETVKKLRGHETAAKFIHGSLNNSSLAITNMMG 157
PL+F+ K+QEII+ K+ Y+ L K + + K+ ++++ + +N+
Sbjct: 299 PLEFLTKSQEIIERKKKEREEYMNTNRLPVTKLINEFDLEIKYGEDKVSSTYINSSNVYR 358
Query: 158 P 158
P
Sbjct: 359 P 359
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,038,623
Number of Sequences: 539616
Number of extensions: 2668667
Number of successful extensions: 7065
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7056
Number of HSP's gapped (non-prelim): 17
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)