Query 044959
Match_columns 159
No_of_seqs 187 out of 333
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 14:43:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044959.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044959hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 99.9 2E-25 1.5E-29 156.7 8.2 69 69-137 11-79 (80)
2 d2craa1 a.4.1.1 (A:7-64) Homeo 99.8 2.1E-21 1.5E-25 129.5 4.8 57 76-136 2-58 (58)
3 d1vnda_ a.4.1.1 (A:) VND/NK-2 99.8 8.2E-21 6E-25 132.5 7.0 67 73-143 7-73 (77)
4 d1p7ia_ a.4.1.1 (A:) Engrailed 99.8 8E-21 5.8E-25 123.8 4.2 53 77-133 1-53 (53)
5 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 99.8 3.8E-21 2.8E-25 127.2 2.0 57 76-136 1-57 (58)
6 d1jgga_ a.4.1.1 (A:) Even-skip 99.8 6.2E-21 4.5E-25 126.2 1.7 56 77-136 1-56 (57)
7 d2e1oa1 a.4.1.1 (A:8-64) Homeo 99.8 9.3E-21 6.8E-25 125.3 1.9 57 76-136 1-57 (57)
8 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 99.8 8.9E-20 6.4E-24 124.4 5.4 61 73-137 6-66 (67)
9 d1ftta_ a.4.1.1 (A:) Thyroid t 99.8 3E-20 2.2E-24 126.9 2.7 59 75-137 2-60 (68)
10 d1wi3a_ a.4.1.1 (A:) DNA-bindi 99.8 7.7E-20 5.6E-24 124.9 4.7 64 71-137 3-66 (71)
11 d1pufa_ a.4.1.1 (A:) Homeobox 99.8 2.8E-20 2E-24 130.1 2.4 61 72-136 10-70 (77)
12 d9anta_ a.4.1.1 (A:) Antennape 99.8 1.6E-20 1.1E-24 124.8 1.0 54 79-136 1-54 (56)
13 d1zq3p1 a.4.1.1 (P:2-68) Homeo 99.8 2.5E-20 1.8E-24 126.8 1.4 58 76-137 2-59 (67)
14 d1fjla_ a.4.1.1 (A:) Paired pr 99.8 3.6E-20 2.6E-24 125.2 2.1 59 74-136 1-59 (65)
15 d1bw5a_ a.4.1.1 (A:) Insulin g 99.8 1.4E-19 1E-23 122.8 4.6 61 74-138 2-62 (66)
16 d2cuea1 a.4.1.1 (A:7-74) Paire 99.8 4.5E-20 3.3E-24 125.9 1.4 57 76-136 2-58 (68)
17 d1uhsa_ a.4.1.1 (A:) Homeodoma 99.8 5.7E-20 4.2E-24 127.3 1.4 62 76-140 2-63 (72)
18 d1b72a_ a.4.1.1 (A:) Homeobox 99.7 6.8E-20 4.9E-24 130.8 1.1 61 73-137 25-85 (88)
19 d1au7a1 a.4.1.1 (A:103-160) Pi 99.7 3.5E-19 2.6E-23 117.9 4.1 57 77-137 1-57 (58)
20 d1yz8p1 a.4.1.1 (P:1-60) Pitui 99.7 4.5E-20 3.2E-24 122.7 -1.3 57 76-136 2-58 (60)
21 d1le8a_ a.4.1.1 (A:) Mating ty 99.7 1.1E-18 7.8E-23 113.8 4.2 53 79-135 1-53 (53)
22 d1s7ea1 a.4.1.1 (A:103-152) He 99.7 2.3E-18 1.7E-22 110.4 3.2 50 78-131 1-50 (50)
23 d1e3oc1 a.4.1.1 (C:104-160) Oc 99.7 3.3E-18 2.4E-22 113.0 3.0 55 78-136 1-55 (57)
24 d2cufa1 a.4.1.1 (A:8-89) Homeo 99.7 1.5E-18 1.1E-22 121.7 1.2 57 76-136 1-72 (82)
25 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 99.6 1.8E-17 1.3E-21 113.6 2.4 63 76-139 2-64 (73)
26 d2ecca1 a.4.1.1 (A:1-76) Homeo 99.6 7E-17 5.1E-21 111.3 3.3 59 76-138 4-62 (76)
27 d2ecba1 a.4.1.1 (A:8-83) Zinc 99.6 1.9E-16 1.4E-20 109.2 4.1 53 82-138 11-63 (76)
28 d1x2na1 a.4.1.1 (A:6-67) Homeo 99.5 2.6E-15 1.9E-19 100.3 4.5 59 75-134 2-60 (62)
29 d1lfba_ a.4.1.1 (A:) Hepatocyt 99.5 2E-15 1.4E-19 105.5 4.0 55 79-137 1-76 (78)
30 d1x2ma1 a.4.1.1 (A:8-59) Lag1 99.5 1.2E-15 9E-20 99.1 1.7 51 83-136 1-51 (52)
31 d1k61a_ a.4.1.1 (A:) mat alpha 99.5 2.6E-15 1.9E-19 99.5 3.0 54 82-136 5-58 (60)
32 d2cqxa1 a.4.1.1 (A:8-66) LAG1 99.5 1.4E-15 1E-19 101.0 0.2 57 77-136 3-59 (59)
33 d1ijwc_ a.4.1.2 (C:) HIN recom 94.2 0.012 9.1E-07 36.3 2.4 41 79-128 3-43 (47)
34 d1hlva1 a.4.1.7 (A:1-66) DNA-b 93.4 0.052 3.8E-06 35.7 4.5 46 79-131 5-50 (66)
35 d2jn6a1 a.4.1.19 (A:1-89) Unch 92.7 0.027 1.9E-06 37.4 2.3 45 79-130 3-47 (89)
36 d1bl0a1 a.4.1.8 (A:9-62) MarA 84.5 0.14 1E-05 30.5 1.0 40 85-129 3-42 (54)
37 d1or7a1 a.4.13.2 (A:120-187) S 79.9 0.057 4.1E-06 33.8 -2.3 28 108-135 36-63 (68)
38 d1rp3a2 a.4.13.2 (A:164-234) S 78.7 0.087 6.3E-06 32.6 -1.7 44 82-134 22-65 (71)
39 d1fsea_ a.4.6.2 (A:) Germinati 76.6 0.64 4.6E-05 28.8 2.1 47 79-135 2-48 (67)
40 d1gyxa_ d.80.1.1 (A:) 4-oxaloc 74.6 1.3 9.5E-05 29.0 3.4 36 79-128 9-44 (76)
41 d2r1jl1 a.35.1.2 (L:3-68) P22 72.7 1.4 0.0001 26.7 2.9 34 89-130 7-40 (66)
42 d1l3la1 a.4.6.2 (A:170-234) Qu 70.4 1 7.5E-05 27.8 1.9 46 80-135 3-48 (65)
43 d2auwa1 a.35.1.10 (A:88-154) H 69.8 1.7 0.00012 27.9 2.9 25 108-132 16-40 (67)
44 d1f54a_ a.39.1.5 (A:) Calmodul 68.3 5.1 0.00037 24.4 5.1 49 80-128 2-53 (77)
45 d1fi6a_ a.39.1.6 (A:) Reps1 {M 66.3 3.1 0.00023 26.6 3.8 48 81-128 2-50 (92)
46 d1a04a1 a.4.6.2 (A:150-216) Ni 65.2 2.2 0.00016 26.3 2.7 46 80-135 5-50 (67)
47 d1c07a_ a.39.1.6 (A:) Eps15 {H 65.1 3.5 0.00025 26.6 3.9 48 81-128 3-51 (95)
48 d1y9qa1 a.35.1.8 (A:4-82) Prob 63.6 3.7 0.00027 25.4 3.6 23 109-131 24-46 (79)
49 d2iu5a1 a.4.1.9 (A:1-71) Trans 63.4 2 0.00014 26.4 2.2 38 88-130 13-50 (71)
50 d1yoza1 a.253.1.1 (A:11-124) H 62.7 3.8 0.00027 28.5 3.8 31 87-117 77-108 (114)
51 d2ppxa1 a.35.1.3 (A:30-91) Unc 62.0 1.8 0.00013 26.5 1.8 24 108-131 14-37 (62)
52 d1b0na2 a.35.1.3 (A:1-68) SinR 61.5 3.5 0.00025 24.9 3.1 22 109-130 17-38 (68)
53 d2g7la1 a.4.1.9 (A:16-83) Puta 60.6 2 0.00015 26.3 1.9 46 80-130 2-48 (68)
54 d1yioa1 a.4.6.2 (A:131-200) Re 58.9 1.3 9.2E-05 27.9 0.6 45 81-135 12-56 (70)
55 d1p4wa_ a.4.6.2 (A:) Transcrip 58.8 3.2 0.00023 26.9 2.7 46 80-135 21-66 (87)
56 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 57.7 9.9 0.00072 23.6 4.9 47 79-126 2-49 (59)
57 d2jxca1 a.39.1.6 (A:121-215) E 57.6 4.1 0.0003 26.4 3.2 46 81-127 3-49 (95)
58 d1avsa_ a.39.1.5 (A:) Troponin 57.3 4.7 0.00034 25.1 3.3 51 77-127 3-56 (81)
59 d2icta1 a.35.1.3 (A:8-94) Anti 55.2 4.1 0.0003 26.2 2.8 23 109-131 17-39 (87)
60 d1z0xa1 a.4.1.9 (A:4-71) Trans 54.7 3.1 0.00023 25.4 2.0 28 103-130 20-47 (68)
61 d2fd5a1 a.4.1.9 (A:1-76) Proba 54.7 3 0.00022 25.6 1.9 40 87-131 13-52 (76)
62 d2fq4a1 a.4.1.9 (A:9-77) Trans 54.2 2.1 0.00015 26.3 1.1 38 88-130 11-48 (69)
63 d2pq3a1 a.39.1.5 (A:3-75) Calm 52.6 5.5 0.0004 24.1 3.0 47 82-128 2-51 (73)
64 d1utxa_ a.35.1.3 (A:) Putative 52.1 3.1 0.00023 25.1 1.7 23 109-131 17-39 (66)
65 d2ofya1 a.35.1.3 (A:3-84) Puta 51.8 1.9 0.00014 28.0 0.6 49 79-130 1-49 (82)
66 d1lvaa3 a.4.5.35 (A:511-574) C 50.0 9 0.00066 23.5 3.7 39 82-125 1-42 (64)
67 d2croa_ a.35.1.2 (A:) cro 434 49.7 3.4 0.00025 24.8 1.6 23 109-131 19-41 (65)
68 d1otfa_ d.80.1.1 (A:) 4-oxaloc 49.3 7.7 0.00056 23.1 3.2 33 82-128 11-43 (59)
69 d1y7ya1 a.35.1.3 (A:5-73) Rest 49.0 3.8 0.00028 24.8 1.8 24 108-131 24-47 (69)
70 d2fbqa1 a.4.1.9 (A:2-80) Trans 48.0 1.7 0.00013 27.0 -0.1 28 103-130 21-48 (79)
71 d2oi8a1 a.4.1.9 (A:8-86) Putat 47.7 2.2 0.00016 26.5 0.4 37 89-130 17-53 (79)
72 d1j9ia_ a.6.1.5 (A:) Terminase 47.6 3.6 0.00026 26.8 1.5 19 109-127 5-23 (68)
73 d1r69a_ a.35.1.2 (A:) 434 C1 r 47.2 4 0.00029 24.2 1.6 23 108-130 16-38 (63)
74 d2gena1 a.4.1.9 (A:6-75) Proba 47.2 3.3 0.00024 25.0 1.2 39 87-130 6-44 (70)
75 d1u5ta1 a.4.5.54 (A:20-164) Va 46.6 9.5 0.00069 27.8 3.9 36 88-123 22-59 (145)
76 d2ao9a1 a.4.1.17 (A:13-132) Ph 46.3 4.8 0.00035 28.8 2.1 45 80-127 10-57 (120)
77 d1s0ya_ d.80.1.1 (A:) Trans-3- 45.1 9.8 0.00071 22.9 3.3 33 82-128 11-43 (62)
78 d3c07a1 a.4.1.9 (A:15-89) Puta 44.5 4.8 0.00035 24.3 1.7 28 103-130 22-49 (75)
79 d1t56a1 a.4.1.9 (A:22-94) Ethr 44.4 3.9 0.00029 24.7 1.2 28 103-130 20-47 (73)
80 d1t3ta1 a.5.10.1 (A:153-220) F 44.1 17 0.0012 23.2 4.5 32 80-114 28-59 (68)
81 d1j5ya1 a.4.5.1 (A:3-67) Putat 43.1 5.7 0.00041 24.2 1.9 22 107-128 23-44 (65)
82 d1umqa_ a.4.1.12 (A:) Photosyn 42.3 13 0.00091 22.5 3.5 37 84-128 19-55 (60)
83 d1ui5a1 a.4.1.9 (A:5-75) A-fac 41.2 4.4 0.00032 24.7 1.1 28 103-130 22-49 (71)
84 d1gpma1 c.26.2.1 (A:208-404) G 41.0 7.6 0.00055 25.8 2.4 22 103-124 171-192 (197)
85 d1rkta1 a.4.1.9 (A:2-82) Hypot 41.0 4.2 0.00031 25.2 1.0 37 89-130 19-55 (81)
86 d2np5a1 a.4.1.9 (A:9-77) Trans 40.3 3.6 0.00026 24.7 0.6 38 88-130 8-45 (69)
87 d1auib_ a.39.1.5 (B:) Calcineu 40.0 8.8 0.00064 25.8 2.7 19 79-97 7-25 (165)
88 d2o7ta1 a.4.1.9 (A:1-78) Trans 39.4 5.2 0.00038 24.8 1.2 28 103-130 24-51 (78)
89 d1r8da_ a.6.1.3 (A:) Multidrug 38.9 5.3 0.00039 26.2 1.3 21 108-128 4-24 (109)
90 d1ae9a_ d.163.1.1 (A:) Integra 38.7 13 0.00093 23.8 3.3 36 79-119 1-36 (179)
91 d2b5aa1 a.35.1.3 (A:1-77) Regu 38.7 6.9 0.0005 23.9 1.8 23 108-130 25-47 (77)
92 d1g3nc1 a.74.1.1 (C:16-147) Vi 38.4 13 0.00091 25.3 3.3 22 81-102 110-132 (132)
93 d2iw5b1 a.4.1.3 (B:376-440) RE 38.1 36 0.0026 20.2 5.2 48 76-131 2-50 (65)
94 d2gfna1 a.4.1.9 (A:4-80) Proba 37.9 4.2 0.0003 25.0 0.6 27 104-130 24-50 (77)
95 d1d5ya1 a.4.1.8 (A:3-56) Rob t 37.2 3.7 0.00027 23.9 0.2 40 85-129 3-42 (54)
96 d1r8ea1 a.6.1.3 (A:3-120) Tran 36.6 6.1 0.00044 26.1 1.3 20 109-128 6-25 (118)
97 d2hkua1 a.4.1.9 (A:18-87) Puta 36.4 9.6 0.0007 23.1 2.2 38 88-131 8-45 (70)
98 d1pb6a1 a.4.1.9 (A:14-85) Hypo 36.3 5.7 0.00042 24.2 1.1 38 88-130 11-48 (72)
99 d2cqra1 a.4.1.3 (A:7-66) DnaJ 36.1 38 0.0028 19.9 5.2 39 75-117 8-46 (60)
100 d1s7oa_ a.4.13.3 (A:) Hypothet 35.8 10 0.00073 25.7 2.4 43 82-134 17-60 (106)
101 d1sgma1 a.4.1.9 (A:5-77) Putat 35.7 8.3 0.00061 23.2 1.8 39 88-131 9-47 (73)
102 d2o2xa1 c.108.1.19 (A:8-216) H 35.2 29 0.0021 24.9 5.2 49 79-129 78-153 (209)
103 d2uyzb1 d.15.1.1 (B:20-96) SUM 35.0 8.1 0.00059 24.0 1.7 30 106-135 26-55 (77)
104 d1wrka1 a.39.1.5 (A:4-85) Trop 34.6 30 0.0022 21.3 4.6 48 81-128 8-59 (82)
105 d1q06a_ a.6.1.3 (A:) Transcrip 34.1 7 0.00051 26.2 1.3 34 109-144 3-37 (127)
106 d2g3ba1 a.4.1.9 (A:2-73) Putat 34.0 6.9 0.0005 23.7 1.2 28 104-131 20-47 (72)
107 d1v7ba1 a.4.1.9 (A:1-74) Trans 33.9 8.9 0.00065 23.2 1.7 39 87-130 10-48 (74)
108 d1jt6a1 a.4.1.9 (A:2-72) Multi 33.2 7.3 0.00053 23.5 1.2 28 103-130 18-45 (71)
109 d1k81a_ g.59.1.1 (A:) Zinc-bin 32.6 4.2 0.0003 23.5 -0.1 16 31-46 17-32 (36)
110 d2ezla_ a.4.1.2 (A:) Ibeta sub 32.6 18 0.0013 24.6 3.4 39 85-128 37-75 (99)
111 d2zfda1 a.39.1.5 (A:32-214) Ca 32.4 23 0.0017 23.9 4.0 42 79-120 8-52 (183)
112 d2mysb_ a.39.1.5 (B:) Myosin E 31.6 48 0.0035 21.4 5.4 49 82-130 1-53 (145)
113 d1x57a1 a.35.1.12 (A:8-85) End 31.3 9.6 0.0007 23.8 1.5 24 108-131 21-44 (78)
114 d2i10a1 a.4.1.9 (A:10-78) Puta 31.1 8.2 0.0006 23.2 1.1 28 103-130 17-44 (69)
115 d1bh9b_ a.22.1.3 (B:) TAF(II)2 30.8 31 0.0023 22.9 4.2 29 82-116 1-29 (89)
116 d1xsva_ a.4.13.3 (A:) Hypothet 30.7 10 0.00074 25.7 1.7 44 82-134 19-62 (106)
117 d1euvb_ d.15.1.1 (B:) SUMO-1 ( 30.2 11 0.0008 23.4 1.7 31 106-136 27-57 (79)
118 d1wdcb_ a.39.1.5 (B:) Myosin E 30.2 61 0.0045 20.8 5.8 48 82-129 1-51 (142)
119 d1aopa1 d.58.36.1 (A:81-145) S 30.0 20 0.0015 21.8 2.9 18 81-98 10-27 (65)
120 d1ku3a_ a.4.13.2 (A:) Sigma70 29.8 13 0.00092 22.8 1.9 39 81-124 8-46 (61)
121 d1iq3a_ a.39.1.6 (A:) Pob1 {Hu 29.5 6.1 0.00044 26.3 0.3 48 80-127 14-62 (110)
122 d1j2oa2 g.39.1.3 (A:31-63) Rho 29.2 6.5 0.00047 22.3 0.3 9 36-44 1-9 (33)
123 d1w0ua_ a.4.1.4 (A:) Telomeric 29.0 23 0.0017 20.8 3.0 21 78-98 1-21 (55)
124 d1gt1a_ b.60.1.1 (A:) Odorant- 29.0 16 0.0011 24.3 2.5 20 79-98 120-139 (158)
125 d2vkva1 a.4.1.9 (A:6-67) Tetra 28.9 9.3 0.00068 22.6 1.1 27 104-130 17-43 (62)
126 d1hh1a_ c.52.1.18 (A:) Archaea 27.8 16 0.0011 26.2 2.4 22 77-98 55-76 (132)
127 d1wm3a_ d.15.1.1 (A:) SUMO-2 { 27.8 13 0.00093 22.9 1.7 30 106-135 25-54 (72)
128 d1guua_ a.4.1.3 (A:) c-Myb, DN 27.8 25 0.0018 20.2 2.9 31 79-116 1-31 (50)
129 d1w0ta_ a.4.1.4 (A:) DNA-bindi 27.4 26 0.0019 20.3 3.0 21 78-98 1-21 (52)
130 d2hyja1 a.4.1.9 (A:8-82) Putat 27.3 10 0.00076 23.0 1.1 27 104-130 23-49 (75)
131 d2cpra1 a.60.8.4 (A:483-595) E 27.3 40 0.0029 22.1 4.4 36 76-123 14-49 (113)
132 d1vi0a1 a.4.1.9 (A:6-77) Hypot 27.0 7.9 0.00057 23.2 0.5 38 88-130 8-45 (72)
133 d1gv2a2 a.4.1.3 (A:144-190) c- 26.8 26 0.0019 20.1 2.9 43 79-129 1-44 (47)
134 d1rp3a1 a.4.13.1 (A:87-163) Si 26.7 15 0.0011 22.5 1.9 32 91-128 17-48 (77)
135 d2np3a1 a.4.1.9 (A:35-99) Puta 26.6 8.8 0.00064 23.1 0.7 29 103-131 13-41 (65)
136 d1biaa1 a.4.5.1 (A:1-63) Bioti 26.5 10 0.00075 23.0 1.0 22 108-129 21-42 (63)
137 d1u6ea2 c.95.1.2 (A:175-317) K 26.0 44 0.0032 22.8 4.6 35 88-122 52-94 (148)
138 d1dcpa_ d.74.1.1 (A:) Pterin-4 25.7 18 0.0013 23.7 2.3 22 81-102 2-23 (99)
139 d2cpga_ a.43.1.3 (A:) Transcri 25.4 9.7 0.00071 22.6 0.7 24 75-98 2-25 (43)
140 d2o38a1 a.35.1.13 (A:28-116) H 24.6 25 0.0018 22.2 2.8 34 89-130 15-48 (89)
141 d1x93a1 a.43.1.3 (A:31-73) Unc 24.6 19 0.0014 21.1 1.9 16 81-96 7-22 (43)
142 d2a6ca1 a.35.1.13 (A:1-69) HTH 24.5 15 0.0011 22.2 1.5 35 88-130 9-43 (69)
143 d2p8ta1 a.4.5.72 (A:14-82) Hyp 24.5 13 0.00094 23.9 1.2 18 108-125 19-36 (69)
144 d1f5qb1 a.74.1.1 (B:6-146) Vir 24.0 32 0.0023 23.4 3.4 23 81-103 118-141 (141)
145 d2ezia_ a.4.1.2 (A:) Transposa 24.0 72 0.0052 19.6 4.9 37 79-119 5-45 (75)
146 d1lkja_ a.39.1.5 (A:) Calmodul 23.8 71 0.0052 20.3 5.1 43 80-122 2-45 (146)
147 d1neea2 g.59.1.1 (A:99-135) Zi 23.8 10 0.00076 21.8 0.6 16 31-46 18-33 (37)
148 d1aiha_ d.163.1.1 (A:) Integra 23.6 50 0.0036 21.9 4.4 36 81-120 6-41 (170)
149 d2id6a1 a.4.1.9 (A:1-75) Trans 23.6 16 0.0011 22.1 1.5 27 104-130 21-47 (75)
150 d1iufa1 a.4.1.7 (A:-2-75) Ars- 23.4 58 0.0042 21.3 4.5 30 76-108 6-35 (78)
151 d1s7ja_ d.21.1.2 (A:) Hypothet 22.7 23 0.0017 25.8 2.6 21 103-123 29-49 (260)
152 d1bu2a1 a.74.1.1 (A:22-148) Vi 22.7 34 0.0025 22.8 3.3 23 80-102 104-127 (127)
153 d1zk8a1 a.4.1.9 (A:6-77) Trans 22.6 11 0.00078 22.7 0.5 44 82-130 3-47 (72)
154 d1xc5a1 a.4.1.3 (A:413-480) Nu 22.1 39 0.0028 20.3 3.2 53 71-131 9-62 (68)
155 d2id3a1 a.4.1.9 (A:13-80) Puta 21.9 12 0.00088 22.3 0.6 38 88-130 13-50 (68)
156 d1vkja_ c.37.1.5 (A:) Heparan 21.8 82 0.006 21.5 5.4 34 75-119 221-254 (258)
157 d1nd9a_ a.6.1.6 (A:) N-termina 21.8 9.3 0.00068 23.1 0.1 23 108-130 4-26 (49)
158 d1yt3a1 a.60.8.3 (A:194-294) R 20.8 70 0.0051 20.1 4.5 33 79-123 13-45 (101)
159 d1hnja2 c.95.1.2 (A:175-317) K 20.8 71 0.0051 21.5 4.8 37 87-123 47-91 (143)
160 d1aisb1 a.74.1.2 (B:1108-1205) 20.6 20 0.0014 22.7 1.6 18 107-124 7-24 (98)
161 d1dtla_ a.39.1.5 (A:) Troponin 20.5 76 0.0055 20.3 4.7 41 81-121 7-49 (156)
162 d2d6ya1 a.4.1.9 (A:7-74) Putat 20.5 16 0.0011 21.9 0.9 27 104-130 20-46 (68)
163 d1t8ta_ c.37.1.5 (A:) Heparan 20.4 87 0.0064 21.9 5.4 34 75-119 233-266 (271)
164 d1jhfa1 a.4.5.2 (A:2-72) LexA 20.0 78 0.0057 19.1 4.4 41 81-127 2-46 (71)
No 1
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.92 E-value=2e-25 Score=156.71 Aligned_cols=69 Identities=41% Similarity=0.767 Sum_probs=64.1
Q ss_pred CCCCCCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 69 EHKNYKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 69 ~~~~~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
.....++||.||.||.+|++.|++|||+++|..+|||..++++||.+|||++.||+|||||+|++.|+.
T Consensus 11 ~~~~~~~kR~Rt~ft~~Q~~~L~~~fe~~~~~~~~p~~~~~~~la~~~gl~~~~i~vWFqN~R~~~k~~ 79 (80)
T d1wh7a_ 11 SSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSGPSS 79 (80)
T ss_dssp CCCCCCSSCCCCCCCHHHHHHHHHHHHHHTSCCCSSTTHHHHHHHHHSCCCHHHHHHHHHTTSCCSCCC
T ss_pred CCCccCCCCccccCCHHHHHHHHHHHHHhcccccCcCHHHHHHHHHHHCCCHHHeeeecccCcCCCCCC
Confidence 344556789999999999999999999999999999999999999999999999999999999999863
No 2
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.1e-21 Score=129.51 Aligned_cols=57 Identities=14% Similarity=0.282 Sum_probs=54.8
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
||.||.||.+|++.|+.+|+.+ +|||.+++++||..|||++.+|+|||||+|+|+||
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~~----~yp~~~~r~~LA~~l~l~~~qV~vWFqNrR~k~kk 58 (58)
T d2craa1 2 RKKRIPYSKGQLRELEREYAAN----KFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58 (58)
T ss_dssp CCSCCCSCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHTTTS
T ss_pred CCCCCCCCHHHHHHHHHHHhhc----CCCCHHHHHHHHHHcCCCHHHeeecccchhhhccC
Confidence 7889999999999999999997 89999999999999999999999999999999986
No 3
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.82 E-value=8.2e-21 Score=132.46 Aligned_cols=67 Identities=16% Similarity=0.266 Sum_probs=60.8
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCCCCCccc
Q 044959 73 YKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPVRVPEKC 143 (159)
Q Consensus 73 ~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~~~~~~~ 143 (159)
.++||.||.||++|++.|+.+|+.. +||+..++++||.+|||++.+|+|||||+|+|+|+.......
T Consensus 7 ~k~rr~Rt~ft~~Q~~~Le~~F~~~----~yP~~~~r~~LA~~l~l~~~qV~~WFqNrR~k~kr~~~~~~~ 73 (77)
T d1vnda_ 7 NKKRKRRVLFTKAQTYELERRFRQQ----RYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGY 73 (77)
T ss_dssp SSSCSSCCCCCTTHHHHHHHHHHHC----SCCCHHHHHHHHHHHTCCHHHHHHHHHHSSSSCSSSCCCSSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCChhhhhhcchhHHHHHHHHhhccCC
Confidence 4678899999999999999999997 899999999999999999999999999999999986554433
No 4
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.80 E-value=8e-21 Score=123.84 Aligned_cols=53 Identities=23% Similarity=0.461 Sum_probs=51.1
Q ss_pred CCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCC
Q 044959 77 TKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRR 133 (159)
Q Consensus 77 R~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k 133 (159)
|.||.||++|++.|+..|+.. +||+..++++||.+|||++.+|+|||||+|+|
T Consensus 1 R~Rt~ft~~Q~~~Le~~F~~~----~yp~~~~r~~LA~~lgL~~~qV~vWFqNrRaK 53 (53)
T d1p7ia_ 1 RPRTAFSSEQLARLKREFNEN----RYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53 (53)
T ss_dssp CCCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred CCCccCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCChHHhhhcccccCCC
Confidence 689999999999999999997 89999999999999999999999999999986
No 5
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=3.8e-21 Score=127.22 Aligned_cols=57 Identities=23% Similarity=0.343 Sum_probs=54.4
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
||.||.||++|++.|+.+|+.. +|||..++++||..|||++.+|+|||||+|+++||
T Consensus 1 rr~Rt~ft~~Ql~~Le~~F~~~----~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr 57 (58)
T d1ig7a_ 1 RKPRTPFTTAQLLALERKFRQK----QYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57 (58)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHC----SCCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCChhheeecCcchHhHhcc
Confidence 6899999999999999999997 89999999999999999999999999999998765
No 6
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.79 E-value=6.2e-21 Score=126.15 Aligned_cols=56 Identities=18% Similarity=0.286 Sum_probs=53.4
Q ss_pred CCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 77 TKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 77 R~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
|.||.||++|++.|+.+|+.. +|||..++++||.+|||++.+|+|||||+|+++||
T Consensus 1 R~Rt~fT~~Ql~~Le~~F~~~----~yp~~~~r~~LA~~lgl~~~qV~vWFqNrR~k~kk 56 (57)
T d1jgga_ 1 RYRTAFTRDQLGRLEKEFYKE----NYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 56 (57)
T ss_dssp CCCCCCCHHHHHHHHHHHHHC----SCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCChhHhhhcchhhhhhhhc
Confidence 789999999999999999987 89999999999999999999999999999998764
No 7
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=9.3e-21 Score=125.29 Aligned_cols=57 Identities=12% Similarity=0.267 Sum_probs=54.1
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
|+.||.||++|++.|+.+|+.+ +|||.+++++||.+|||++.+|+|||||+|+++||
T Consensus 1 k~~R~~ft~~Q~~~Le~~F~~n----~yp~~~~r~~LA~~l~L~~~qV~~WFqNrR~k~kk 57 (57)
T d2e1oa1 1 KGGQVRFSNDQTIELEKKFETQ----KYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57 (57)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCCCHHHhhHhhhhhhhhccC
Confidence 7899999999999999999997 89999999999999999999999999999998753
No 8
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=8.9e-20 Score=124.39 Aligned_cols=61 Identities=18% Similarity=0.367 Sum_probs=57.6
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 73 YKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 73 ~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
..+||.||.||.+|++.|+.+|++. +|||..++++||.+|||++.+|+|||||+|+++|+.
T Consensus 6 ~~~rr~Rt~~t~~q~~~Le~~F~~n----~~P~~~~r~~La~~~~l~~~~V~~WFqNrR~k~Kk~ 66 (67)
T d1ocpa_ 6 QARKRKRTSIENRVRWSLETMFLKC----PKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRS 66 (67)
T ss_dssp CCSSSCCSSCCHHHHHHHHHHHSSC----SCCCHHHHHHHHHHHTCCHHHHHHHHHHHHSSSSSC
T ss_pred hccCCCCCCCCHHHHHHHHHHHHHc----cCCCHHHHHHHHHHHcCCHHHHHHHhHHHHHHHhcC
Confidence 4578999999999999999999987 899999999999999999999999999999999873
No 9
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.77 E-value=3e-20 Score=126.88 Aligned_cols=59 Identities=15% Similarity=0.270 Sum_probs=56.5
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 75 AKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 75 kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
+||.||.||++|++.|+++|+.+ +|||..++++||..|||++.+|+|||||+|+++++.
T Consensus 2 krr~Rt~ft~~Ql~~Le~~F~~~----~yPs~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kk~ 60 (68)
T d1ftta_ 2 RRKRRVLFSQAQVYELERRFKQQ----KYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 60 (68)
T ss_dssp CSSSCSSCCHHHHHHHHHHHHHS----SSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCCccceeeecccHHHHHhhc
Confidence 68999999999999999999997 899999999999999999999999999999999874
No 10
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=7.7e-20 Score=124.94 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=57.7
Q ss_pred CCCCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 71 KNYKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 71 ~~~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
++++.||.||.||.+|++.|+++|++. .+||+.+++++||.+|||+..+|+|||||+|++.|+.
T Consensus 3 s~~~~~r~R~~~t~~Q~~~Le~~F~~~---~~~P~~~~~~~La~~lgl~~~qV~~WFqNrR~k~kk~ 66 (71)
T d1wi3a_ 3 SGSSGPRSRTKISLEALGILQSFIHDV---GLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHS 66 (71)
T ss_dssp CCCCCCCCCCCCCSHHHHHHHHHHHHH---CSCCCHHHHHHHHHHSCCCHHHHHHHHHHHHHHCCSS
T ss_pred CCCCCCCCCccCCHHHHHHHHHHHHHh---cCCCCHHHHHHHHHHhCCCHHHHHHHhHhhHhhhccc
Confidence 345678999999999999999999763 2799999999999999999999999999999999873
No 11
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=2.8e-20 Score=130.05 Aligned_cols=61 Identities=15% Similarity=0.175 Sum_probs=57.1
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 72 NYKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 72 ~~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
...+||.||.||++|++.|+.+|+.. +||+..++++||..|||++.+|+|||||+|+|+|+
T Consensus 10 ~~~~rr~Rt~ft~~Ql~~Le~~F~~~----~yPs~~~r~~LA~~l~l~~~qV~iWFqNrR~k~kr 70 (77)
T d1pufa_ 10 ARSTRKKRCPYTKHQTLELEKEFLFN----MYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKK 70 (77)
T ss_dssp CCTTSCCCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCCCCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCCHHHhhhhhhhhHHHHHH
Confidence 34568899999999999999999997 89999999999999999999999999999999875
No 12
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=99.77 E-value=1.6e-20 Score=124.82 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=52.1
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
||.||++|++.|+.+|+.+ +||+..++++||..|||++++|+|||||+|+|+|+
T Consensus 1 Rt~ft~~Q~~~Le~~F~~~----~yp~~~~r~~LA~~l~l~~~~V~iWFQNrRak~kk 54 (56)
T d9anta_ 1 RQTYTRYQTLELEKEFHFN----RYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKK 54 (56)
T ss_dssp CCCCCHHHHHHHHHHHTTC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCCChhHeeeccccchhhhhh
Confidence 8999999999999999887 89999999999999999999999999999999876
No 13
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.77 E-value=2.5e-20 Score=126.84 Aligned_cols=58 Identities=17% Similarity=0.309 Sum_probs=55.0
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
||.||.||.+|++.|+.+|+.. +||+..++++||..|||++.+|+|||||+|+++|+.
T Consensus 2 rr~Rt~ft~~Ql~~Le~~F~~~----~yp~~~~r~~LA~~l~l~~~~V~iWFqNrR~k~kk~ 59 (67)
T d1zq3p1 2 RRTRTTFTSSQIAELEQHFLQG----RYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQ 59 (67)
T ss_dssp SCCSCCCCHHHHHHHHHHHTTC----SSCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCCccceeeccccHHHhHhhh
Confidence 6789999999999999999987 899999999999999999999999999999998863
No 14
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.77 E-value=3.6e-20 Score=125.22 Aligned_cols=59 Identities=22% Similarity=0.337 Sum_probs=56.0
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 74 KAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 74 ~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
++||.||.||.+|++.|+..|+.+ +|||..++++||.+|||+..+|+|||||+|+++++
T Consensus 1 k~rr~Rt~ft~~Q~~~Le~~F~~n----~yPs~~~r~~LA~~lgl~~~~V~~WFqNrR~k~kk 59 (65)
T d1fjla_ 1 KQRRSRTTFSASQLDELERAFERT----QYPDIYTREELAQRTNLTEARIQVWFQNRRARLRK 59 (65)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHc----CCCChHHHHHHHHHhCCCHHHhhHhhhhHHHHHHh
Confidence 468999999999999999999987 89999999999999999999999999999999875
No 15
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.76 E-value=1.4e-19 Score=122.80 Aligned_cols=61 Identities=21% Similarity=0.335 Sum_probs=57.8
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCCC
Q 044959 74 KAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPVR 138 (159)
Q Consensus 74 ~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~~ 138 (159)
++||.||.||.+|++.|+..|+.+ +||+..++++||.+|||++.+|+|||||+|++.|+..
T Consensus 2 k~kR~Rt~~t~~Q~~~Le~~F~~n----~~Ps~~~~~~LA~~l~l~~~~V~~WFqNrR~k~kk~~ 62 (66)
T d1bw5a_ 2 KTTRVRTVLNEKQLHTLRTCYAAN----PRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRS 62 (66)
T ss_dssp CCSCCCCCCSHHHHHHHHHHHHHC----SCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHCSSCC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHcCcCHHHhhhhhHhHHHHHHHHH
Confidence 479999999999999999999997 8999999999999999999999999999999998854
No 16
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=4.5e-20 Score=125.88 Aligned_cols=57 Identities=18% Similarity=0.318 Sum_probs=54.7
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
||.||.||++|++.|+.+|+.+ +|||..++++||.+|||++.+|+|||||+|+++++
T Consensus 2 rR~Rt~ft~~Ql~~Le~~F~~n----~yP~~~~r~~LA~~l~L~~~~V~~WFqNrR~k~kr 58 (68)
T d2cuea1 2 QRNRTSFTQEQIEALEKEFERT----HYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRR 58 (68)
T ss_dssp CCCCCCSCHHHHHHHHHHHTTC----SSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHc----CCCCHHHHHHHHHHhCcChhheeecCcchhHHHHh
Confidence 7889999999999999999997 89999999999999999999999999999999875
No 17
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=5.7e-20 Score=127.29 Aligned_cols=62 Identities=15% Similarity=0.172 Sum_probs=55.8
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPVRVP 140 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~~~~ 140 (159)
+|.||.||++|++.|+..|++. .+||+..++++||.+|||++.+|+|||||+|+++++....
T Consensus 2 ~~~r~~fT~~Ql~~Le~~F~~~---n~yP~~~~r~~LA~~lgL~~~~VqvWFqNrRak~rk~~~~ 63 (72)
T d1uhsa_ 2 SEGAATMTEDQVEILEYNFNKV---NKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRSEGL 63 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHHHSS---CSSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHc---cccCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhccCC
Confidence 6899999999999999988763 1689999999999999999999999999999999875443
No 18
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=6.8e-20 Score=130.83 Aligned_cols=61 Identities=13% Similarity=0.174 Sum_probs=53.7
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 73 YKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 73 ~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
...||.||.||.+|++.|+.+|+.+ +||+..++++||.+|||++.+|+|||||+|+++|+.
T Consensus 25 ~~~kr~Rt~ft~~Ql~~Le~~F~~n----~yPs~~~r~~LA~~l~l~~~~V~vWFqNrR~k~Kk~ 85 (88)
T d1b72a_ 25 GSPSGLRTNFTTRQLTELEKEFHFN----KYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKR 85 (88)
T ss_dssp -----CCCCCCHHHHHHHHHHHTTC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHhC----CCCchHHHHHHHHHcCCCHHHeeeccHhHHHHHHHh
Confidence 4568999999999999999999987 899999999999999999999999999999998863
No 19
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.74 E-value=3.5e-19 Score=117.94 Aligned_cols=57 Identities=23% Similarity=0.482 Sum_probs=54.5
Q ss_pred CCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCC
Q 044959 77 TKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 77 R~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~ 137 (159)
|.||.||.+|++.|+.+|+.. +||+..++++||.+|||++.+|+|||||+|++.|+.
T Consensus 1 r~Rt~~s~~q~~~Le~~F~~~----~~P~~~~~~~La~~l~l~~~~V~~WFqNrR~k~kr~ 57 (58)
T d1au7a1 1 KRRTTISIAAKDALERHFGEH----SKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRV 57 (58)
T ss_dssp CCCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHc----cCCCHHHHHHHHHHhCCCHHHHHHHHHHHhHHHHhc
Confidence 689999999999999999987 899999999999999999999999999999999874
No 20
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4.5e-20 Score=122.73 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=54.4
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
||.||.||++|++.|+.+|..+ +|||..++++||.+|||++.+|+|||||+|+++|+
T Consensus 2 rr~Rt~ft~~Q~~~Le~~F~~~----~yP~~~~r~~LA~~l~l~~~~V~~WFqNrR~k~kr 58 (60)
T d1yz8p1 2 RRQRTHFTSQQLQQLEATFQRN----RYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRK 58 (60)
T ss_dssp SCSCCCCCHHHHHHHHHHHTTC----SSCCTTTTTHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHc----CCCChHHHHHHHHHHCCChHHHHHHhHHHHHHHHh
Confidence 7899999999999999999987 89999999999999999999999999999998775
No 21
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=1.1e-18 Score=113.78 Aligned_cols=53 Identities=21% Similarity=0.385 Sum_probs=51.0
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
||.||++|+..|+++|+.. +||+..++++||.++||+..+|++||||+|++.|
T Consensus 1 Rt~~s~~q~~~Le~~F~~~----~~P~~~~~~~LA~~lgl~~~qV~~WFqNrR~k~K 53 (53)
T d1le8a_ 1 KSSISPQARAFLEQVFRRK----QSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHC----SCCCHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhC----CCCCHHHHHHHHHHHCCCHHHHHHHHHhhhhccC
Confidence 8999999999999999987 8999999999999999999999999999999875
No 22
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=2.3e-18 Score=110.39 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=48.2
Q ss_pred CCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 78 KRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 78 ~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
+||.||++|++.|++.|+.+ +|||..++++||.+|||+..+|+|||||+|
T Consensus 1 PRt~ft~~Q~~~Le~~F~~n----~~P~~~~~~~LA~~l~l~~~~V~~WFqNrR 50 (50)
T d1s7ea1 1 PRLVFTDVQRRTLHAIFKEN----KRPSKELQITISQQLGLELSTVSNFFMNAR 50 (50)
T ss_dssp CCSCCCHHHHHHHHHHTTSS----CSSTHHHHHHHHTTSCSSSHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHHCcCHHHhhhcCCcCc
Confidence 59999999999999999887 899999999999999999999999999998
No 23
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=3.3e-18 Score=112.98 Aligned_cols=55 Identities=18% Similarity=0.413 Sum_probs=53.0
Q ss_pred CCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 78 KRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 78 ~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
+||.||++|+..|+.+|+.. +||+.+++++||.+|||++.+|+|||||+|+++|+
T Consensus 1 kRT~~~~~q~~~Le~~F~~~----~~P~~~~~~~LA~~lgL~~~qV~~WFqNrR~k~kk 55 (57)
T d1e3oc1 1 KRTSIETNIRVALEKSFMEN----QKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKR 55 (57)
T ss_dssp CCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHc
Confidence 59999999999999999997 89999999999999999999999999999999886
No 24
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1 (Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.5e-18 Score=121.67 Aligned_cols=57 Identities=18% Similarity=0.236 Sum_probs=54.1
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhC---------------CCccchhhhhccccCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVG---------------ITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiG---------------l~r~VvKVWFqNrR~k~kk 136 (159)
+|.||.||++|++.|+.+|+++ +|||..++++||..+| |++.+|+|||||+|+++|+
T Consensus 1 Rr~R~~ft~~Ql~~LE~~F~~n----~yP~~~~R~~LA~~~~~~~~~~~~~~~~~~~l~~~~V~vWFqNRR~k~kk 72 (82)
T d2cufa1 1 RGSRFTWRKECLAVMESYFNEN----QYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKR 72 (82)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHHHHHHCCTTCCCCTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHhC----CCCCHHHHHHHHHHhccccccccccchhccCCCHHHHHHHHhhhHHHHHH
Confidence 6899999999999999999997 8999999999999875 9999999999999999987
No 25
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.8e-17 Score=113.58 Aligned_cols=63 Identities=17% Similarity=0.227 Sum_probs=56.6
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPVRV 139 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~~~ 139 (159)
||.||.||++|++.|+++|... +.-+||+.+++++||.++||++.+|+|||+|+|.+.++...
T Consensus 2 rk~R~~~t~~q~~~Le~~f~~~-~~~pYPs~~~k~~La~~~gl~~~qv~~WF~N~R~r~k~~~~ 64 (73)
T d1pufb_ 2 RRKRRNFNKQATEILNEYFYSH-LSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIG 64 (73)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHT-TTSCCCCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHCTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHh-cCCCCCCHHHHHHHHHHHCcCHHHhHHHHHHHHHHhcccch
Confidence 7789999999999999988764 34579999999999999999999999999999999886443
No 26
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=7e-17 Score=111.29 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=53.3
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCCC
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPVR 138 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~~ 138 (159)
...++.||.+|++.|++.|..+ +||+.+++++||.+|||++.+|++||+|+|+++|+..
T Consensus 4 ~s~~~r~T~eQ~~~Le~~F~~n----~~Ps~~~~~~La~~~gL~~~qV~~WF~NrR~k~k~~~ 62 (76)
T d2ecca1 4 GSSGKRKTKEQLAILKSFFLQC----QWARREDYQKLEQITGLPRPEIIQWFGDTRYALKHGQ 62 (76)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHc----CCCCHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhch
Confidence 3455678999999999999887 8999999999999999999999999999999888643
No 27
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.9e-16 Score=109.20 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCCCC
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVPVR 138 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk~~ 138 (159)
+|++|+..|+.+|+.+ +||+..++++||.+|||++.+|+|||||+|++.++..
T Consensus 11 ~T~~Q~~~Le~~F~~~----~~P~~~~r~~LA~~l~l~~~~V~~WFqNrR~r~k~~~ 63 (76)
T d2ecba1 11 KTAEQLRVLQASFLNS----SVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKE 63 (76)
T ss_dssp CCHHHHHHHHHHHHHC----SSCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHC----CCCCHHHHHHHHHHhCCCHHHHHHhHHHHHHHHHHHh
Confidence 5999999999999997 8999999999999999999999999999999866533
No 28
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.6e-15 Score=100.34 Aligned_cols=59 Identities=22% Similarity=0.295 Sum_probs=52.3
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCC
Q 044959 75 AKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRP 134 (159)
Q Consensus 75 kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~ 134 (159)
.||.|+.|+.+|++.|+++|+.. +.-+||+.+++++||.++||+..+|++||+|+|.++
T Consensus 2 ~krkR~~~~~~~~~iL~~wf~~~-~~nPyPs~~e~~~La~~~~l~~~qI~~WF~N~R~R~ 60 (62)
T d1x2na1 2 GKNKRGVLPKHATNVMRSWLFQH-IGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 60 (62)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHT-TTSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHh-ccCCCcCHHHHHHHHHHHCcCHHHhHHHHHHHHHHh
Confidence 46788999999999999988763 234799999999999999999999999999999764
No 29
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=99.53 E-value=2e-15 Score=105.53 Aligned_cols=55 Identities=16% Similarity=0.212 Sum_probs=52.0
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhC---------------------CCccchhhhhccccCCCCCC
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVG---------------------ITRKMFKVWLNNNRRRPVPV 137 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiG---------------------l~r~VvKVWFqNrR~k~kk~ 137 (159)
|++||++|++.|+++|+.+ +||+..++++||++++ |++.+|++||+|||.+.|+.
T Consensus 1 R~~~tp~Ql~~Le~~F~~n----~yPs~~~Re~LA~~ln~~~~~~~~~~~~~~~~~~~~~vt~~~V~~WF~NRR~~~kr~ 76 (78)
T d1lfba_ 1 RFKWGPASQQILFQAYERQ----KNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFR 76 (78)
T ss_dssp CCCCCHHHHHHHHHHHTTC----SSCCHHHHHHHHHHHHHHHHTTTTCCTTCTTTTGGGCCCHHHHHHHHHHHHHTTSCC
T ss_pred CccCCHHHHHHHHHHHHhC----CCCCHHHHHHHHHHhchhhhccccccccccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999997 8999999999999994 89999999999999999874
No 30
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=1.2e-15 Score=99.07 Aligned_cols=51 Identities=12% Similarity=0.347 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 83 TEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 83 T~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
|++|...|+.+|.+. .+||+..++++||.++||+.++|+|||||+|++.|+
T Consensus 1 T~~q~~iLE~~F~~~---~~~P~~~~~~~LA~~~~ls~~qV~~WFqNrR~k~k~ 51 (52)
T d1x2ma1 1 TAQPNAILEKVFTAI---TKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51 (52)
T ss_dssp SSCHHHHHHHHHHTT---CSSCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHSCC
T ss_pred ChhHHHHHHHHHHHc---CCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccCc
Confidence 678999999999873 279999999999999999999999999999999987
No 31
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.51 E-value=2.6e-15 Score=99.49 Aligned_cols=54 Identities=19% Similarity=0.315 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
||.+|++.|++.|+.. +.-+||+.+++++||.++||+..+|++||+|+|.+.|+
T Consensus 5 ft~~q~~~L~~~f~~~-~~~pyPs~~e~~~La~~~gL~~~qV~~WF~N~R~r~K~ 58 (60)
T d1k61a_ 5 FTKENVRILESWFAKN-IENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58 (60)
T ss_dssp CCHHHHHHHHHHHHHT-TTSCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHc-CCCCCcCHHHHHHHHHHHCcCHHHHhHHhHhhcccccc
Confidence 9999999999988764 24469999999999999999999999999999987654
No 32
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.48 E-value=1.4e-15 Score=101.00 Aligned_cols=57 Identities=11% Similarity=0.269 Sum_probs=52.2
Q ss_pred CCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 77 TKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 77 R~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
+.|+.|+.+|...|+++|++. .+||+..++++||..+||++.+|+|||||+|++.|+
T Consensus 3 k~~~~~k~~~~~iLE~~F~~~---~~yPs~~~~~~LA~~lgls~~qV~~WFqNrR~k~rp 59 (59)
T d2cqxa1 3 KDSPVNKVEPNDTLEKVFVSV---TKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDKP 59 (59)
T ss_dssp CCCCCSCSCSTTHHHHHHHHT---CSSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCccccHHHHHHHHHc---CCCcCHHHHHHHHHHHCcCHHHHHHHHHhhhcccCc
Confidence 678899999999999999874 279999999999999999999999999999998764
No 33
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=94.21 E-value=0.012 Score=36.26 Aligned_cols=41 Identities=15% Similarity=0.276 Sum_probs=34.5
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
+.++|+||++.+.+..+. | ..+.++|..+||++.+|=-||-
T Consensus 3 ~~~lt~~q~~~a~~l~~~-G--------~s~~~iA~~~gVSr~TiYry~p 43 (47)
T d1ijwc_ 3 PRAINKHEQEQISRLLEK-G--------HPRQQLAIIFGIGVSTLYRYFP 43 (47)
T ss_dssp CCSSCHHHHHHHHHHHHT-T--------CCHHHHHHHHTCCHHHHHHHSC
T ss_pred CCcCCHHHHHHHHHHHHC-C--------CCHHHHHHHHCcCHHHHHhhCC
Confidence 458999999999997754 4 2389999999999999988874
No 34
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.41 E-value=0.052 Score=35.66 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=37.6
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
|..+|-+++-.+..++|.. .+.. ..++|.++||++.+|..|+.|+-
T Consensus 5 Rk~LT~~eK~~ii~~~e~g----~k~s---q~eIA~~fGv~~STvs~IlKnK~ 50 (66)
T d1hlva1 5 RRQLTFREKSRIIQEVEEN----PDLR---KGEIARRFNIPPSTLSTILKNKR 50 (66)
T ss_dssp SCCCCHHHHHHHHHHHHHC----TTSC---HHHHHHHHTCCHHHHHHHHHTHH
T ss_pred cccCCHHHHHHHHHHHHcC----Ccch---HHHHHHHhCCChhHHHHHHHHHH
Confidence 3459999999999999884 2223 45789999999999999999853
No 35
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=92.69 E-value=0.027 Score=37.42 Aligned_cols=45 Identities=20% Similarity=0.369 Sum_probs=35.2
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
|.+||+|-|..+-...... ....+.++|.++||+..+|..|+..-
T Consensus 3 rk~Ys~EfK~~aV~l~~~~-------~g~s~~~vA~~lGIs~~tl~~W~k~~ 47 (89)
T d2jn6a1 3 TKTYSEEFKRDAVALYENS-------DGASLQQIANDLGINRVTLKNWIIKY 47 (89)
T ss_dssp CCCCCHHHHHHHHHHHTTG-------GGSCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc-------CCCcHHHHHHHHCCCHHHHHHHHHHH
Confidence 4579999999988776432 12357889999999999999998754
No 36
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=84.50 E-value=0.14 Score=30.52 Aligned_cols=40 Identities=5% Similarity=0.084 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcc
Q 044959 85 EQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNN 129 (159)
Q Consensus 85 eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqN 129 (159)
+.++++.++-+. ++.+.-.++++|+.+||++..|..+|+.
T Consensus 3 ~~i~~v~~yI~~-----~~~~~~tl~~lA~~~~~s~~~l~r~Fk~ 42 (54)
T d1bl0a1 3 ITIHSILDWIED-----NLESPLSLEKVSERSGYSKWHLQRMFKK 42 (54)
T ss_dssp HHHHHHHHHHHT-----TTTSCCCCHHHHHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----ccCCCCCHHHHHHHHCcCHHHHHHHHHH
Confidence 457788888877 4777789999999999999999999964
No 37
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=79.93 E-value=0.057 Score=33.79 Aligned_cols=28 Identities=4% Similarity=-0.060 Sum_probs=24.0
Q ss_pred HHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
..+++|..+|++..+|++.++.-|.+++
T Consensus 36 s~~eIA~~lgis~~tv~~~l~ra~~~Lr 63 (68)
T d1or7a1 36 SYEEIAAIMDCPVGTVRSRIFRAREAID 63 (68)
T ss_dssp CHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 4788999999999999999998776554
No 38
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=78.65 E-value=0.087 Score=32.63 Aligned_cols=44 Identities=9% Similarity=0.008 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCC
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRP 134 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~ 134 (159)
+++.|++.+.-.+- ..-..+++|..+|+++.+|++.++.-+.++
T Consensus 22 L~~~~r~v~~l~~~---------~~~s~~eIA~~lgis~~tv~~~~~ra~~~L 65 (71)
T d1rp3a2 22 LPEREKLVIQLIFY---------EELPAKEVAKILETSVSRVSQLKAKALERL 65 (71)
T ss_dssp SCHHHHHHHHHHHT---------SCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh---------HhCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 56777777666431 123678999999999999999988665544
No 39
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=76.56 E-value=0.64 Score=28.83 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=37.1
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
|..+|+-|.+.|.-+++-. ...++|.++||+.++|+.-+.+=..|+.
T Consensus 2 ~p~LT~rE~~vl~l~~~G~----------s~~eIA~~L~is~~TV~~~~~~i~~Kl~ 48 (67)
T d1fsea_ 2 KPLLTKREREVFELLVQDK----------TTKEIASELFISEKTVRNHISNAMQKLG 48 (67)
T ss_dssp CCCCCHHHHHHHHHHTTTC----------CHHHHHHHHTSCHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHccC----------CHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 3469999999998877332 4677899999999999988877666654
No 40
>d1gyxa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase homologue YdcE {Escherichia coli [TaxId: 562]}
Probab=74.64 E-value=1.3 Score=28.96 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=28.3
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
.-.||.|||++|-+-. -+.+++.+|+++..|.|.|+
T Consensus 9 ~g~lT~EQK~~L~~~i--------------T~a~~~~lg~~~e~V~V~i~ 44 (76)
T d1gyxa_ 9 PRELDEQQKAALAADI--------------TDVIIRHLNSKDSSISIALQ 44 (76)
T ss_dssp CCCCCHHHHHHHHHHH--------------HHHHHHHHTCCGGGCEEEEE
T ss_pred CCCCCHHHHHHHHHHH--------------HHHHHHHhCcCCCeEEEEEE
Confidence 3458999999887644 34578889999999998775
No 41
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=72.70 E-value=1.4 Score=26.68 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 89 KMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 89 kLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+|..+-+..|| ...+||..+||++.+|.-|..++
T Consensus 7 rik~~R~~~g~--------tq~~lA~~~gvs~~~i~~~e~g~ 40 (66)
T d2r1jl1 7 RIRARRKKLKI--------RQAALGKMVGVSNVAISQWERSE 40 (66)
T ss_dssp HHHHHHHHHTC--------CHHHHHHHHTSCHHHHHHHHTTS
T ss_pred HHHHHHHHcCC--------CHHHHHHHHCCCHHHHHHHHcCC
Confidence 44455555554 25678999999999999999764
No 42
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=70.39 E-value=1 Score=27.77 Aligned_cols=46 Identities=13% Similarity=0.134 Sum_probs=36.7
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 80 TKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
..||+-|++.|.-.++-. .-.++|.++||+.++|+.-+++=..|++
T Consensus 3 ~~Lt~rE~~vl~l~~~G~----------s~~eIA~~l~iS~~TV~~~~~~i~~Klg 48 (65)
T d1l3la1 3 AWLDPKEATYLRWIAVGK----------TMEEIADVEGVKYNSVRVKLREAMKRFD 48 (65)
T ss_dssp CCCCHHHHHHHHHHTTTC----------CHHHHHHHHTCCHHHHHHHHHHHHHHHT
T ss_pred cccCHHHHHHHHHHHhcC----------CHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 368999999998887432 4578899999999999998887666654
No 43
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=69.78 E-value=1.7 Score=27.85 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=21.6
Q ss_pred HHHHHHHHhCCCccchhhhhccccC
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNNRR 132 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNrR~ 132 (159)
...+||+.|||++++|.-|=.+.|.
T Consensus 16 tQ~elA~~LGvs~~ti~~yE~G~r~ 40 (67)
T d2auwa1 16 SLTTAAEALGISRRMVSYYRTAHKI 40 (67)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTSSC
T ss_pred CHHHHHHHhCCCHHHHHHHHcCCCC
Confidence 3678999999999999999887763
No 44
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=68.28 E-value=5.1 Score=24.39 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=34.1
Q ss_pred ccCCHHHHHHHHHHHHHhCCCC-CCCCHHHHHHHHHHhCCCc--cchhhhhc
Q 044959 80 TKITEEQKSKMRRFADKLGWKP-QRHDEEEVGKFCGEVGITR--KMFKVWLN 128 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~i-q~~d~~~r~efc~eiGl~r--~VvKVWFq 128 (159)
+.||++|++.+.+.|...-..- -+.+..++..+...+|... ..|+-+|+
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~ 53 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMN 53 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 4689999999999887652111 1255788888888887654 46676664
No 45
>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=66.33 E-value=3.1 Score=26.63 Aligned_cols=48 Identities=13% Similarity=-0.006 Sum_probs=36.2
Q ss_pred cCCHHHHHHHHHHHHHhCC-CCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 81 KITEEQKSKMRRFADKLGW-KPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW-~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
++|++|++.+++.|...-= .--+.+..++..+....||+..+|+..+.
T Consensus 2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~ 50 (92)
T d1fi6a_ 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWE 50 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHH
Confidence 5799999999998876520 11125578999999999999999875543
No 46
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=65.15 E-value=2.2 Score=26.31 Aligned_cols=46 Identities=15% Similarity=0.227 Sum_probs=36.6
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 80 TKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
..+|+-|++.|.-+++=. ...++|.++||++++|+.-+.+=..|+.
T Consensus 5 ~~LT~rE~~vl~ll~~G~----------s~~eIA~~l~iS~~TV~~~~~~i~~Klg 50 (67)
T d1a04a1 5 NQLTPRERDILKLIAQGL----------PNKMIARRLDITESTVKVHVKHMLKKMK 50 (67)
T ss_dssp GGSCHHHHHHHHHHHTTC----------CHHHHHHHHTCCHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHhCC----------CHHHHHHHHCCCHHHHHHHHHHHHHHhC
Confidence 468999999999888432 4578999999999999988777655553
No 47
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.05 E-value=3.5 Score=26.58 Aligned_cols=48 Identities=13% Similarity=0.069 Sum_probs=36.8
Q ss_pred cCCHHHHHHHHHHHHHhCCC-CCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 81 KITEEQKSKMRRFADKLGWK-PQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~-iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
.+|+++++++++.|...--. --+.+..++..+-...||+..+|+.+|.
T Consensus 3 ~lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~ 51 (95)
T d1c07a_ 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWS 51 (95)
T ss_dssp SSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHH
Confidence 36899999999988776211 1136678899999999999999987664
No 48
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=63.57 E-value=3.7 Score=25.37 Aligned_cols=23 Identities=9% Similarity=0.147 Sum_probs=17.0
Q ss_pred HHHHHHHhCCCccchhhhhcccc
Q 044959 109 VGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFqNrR 131 (159)
.++||..+||++..|.-|..+.+
T Consensus 24 q~~lA~~~gis~~~i~~~E~g~~ 46 (79)
T d1y9qa1 24 LDATAQLTGVSKAMLGQIERGES 46 (79)
T ss_dssp HHHHHHHHSSCHHHHHHHHTTCS
T ss_pred HHHHHHHHCcchhHHHHHHcCCC
Confidence 56777788888888888876643
No 49
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=63.36 E-value=2 Score=26.42 Aligned_cols=38 Identities=13% Similarity=0.225 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+...+.+.+. ..+...+.++|++.||++.+|-..|.|+
T Consensus 13 ~aa~~l~~~~-----G~~~~sv~~Ia~~agvs~~t~Y~~F~~k 50 (71)
T d2iu5a1 13 KAFKDLMQSN-----AYHQISVSDIMQTAKIRRQTFYNYFQNQ 50 (71)
T ss_dssp HHHHHHHHHS-----CGGGCCHHHHHHHHTSCGGGGGGTCSSH
T ss_pred HHHHHHHHHc-----CcccCCHHHHHHHhCccccHHHHHcCCH
Confidence 4445566663 4566789999999999999999999874
No 50
>d1yoza1 a.253.1.1 (A:11-124) Hypothetical protein AF0941 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=62.66 E-value=3.8 Score=28.54 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhCCCCCC-CCHHHHHHHHHHhC
Q 044959 87 KSKMRRFADKLGWKPQR-HDEEEVGKFCGEVG 117 (159)
Q Consensus 87 kekLe~ffek~GW~iq~-~d~~~r~efc~eiG 117 (159)
.++|.+|||..|++|.+ .|.+++.++|-.|.
T Consensus 77 ferlkefaeskgfkiekkldpevineialyid 108 (114)
T d1yoza1 77 FERLKEFAESKGFKIEKKLDPEVINEIALYID 108 (114)
T ss_dssp HHHHHHHHHTTC---CCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCceehhcCCHHHHHHHHHHHH
Confidence 47899999999999988 89999999987653
No 51
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=62.00 E-value=1.8 Score=26.46 Aligned_cols=24 Identities=13% Similarity=0.264 Sum_probs=20.9
Q ss_pred HHHHHHHHhCCCccchhhhhcccc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
..++||..+||+..+|.-|=++++
T Consensus 14 tQ~elA~~lGvs~~tvs~~E~G~~ 37 (62)
T d2ppxa1 14 TQEEFSARYHIPLGTLRDWEQGRS 37 (62)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTSS
T ss_pred CHHHHHHHhCCCHHHHHHHHCCCC
Confidence 357899999999999999998754
No 52
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=61.46 E-value=3.5 Score=24.92 Aligned_cols=22 Identities=9% Similarity=0.258 Sum_probs=14.0
Q ss_pred HHHHHHHhCCCccchhhhhccc
Q 044959 109 VGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+||+.+||++.+|.-|-.+.
T Consensus 17 q~~la~~~gis~~~i~~~E~g~ 38 (68)
T d1b0na2 17 LSELAEKAGVAKSYLSSIERNL 38 (68)
T ss_dssp HHHHHHHHTCCHHHHHHHHTTC
T ss_pred HHHHHHHHCCCHHHHHHHHcCC
Confidence 3556666666666666666654
No 53
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=60.55 E-value=2 Score=26.27 Aligned_cols=46 Identities=7% Similarity=0.098 Sum_probs=33.1
Q ss_pred ccCCHHHH-HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 80 TKITEEQK-SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 80 TkFT~eQk-ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+|.+++ +.-.+.+.+. ..+...+.++|+++||++..|-.-|.|+
T Consensus 2 p~~tr~~Il~aa~~l~~~~-----g~~~~si~~ia~~~gvs~~~~y~hF~~K 48 (68)
T d2g7la1 2 PALSRRWIVDTAVALMRAE-----GLEKVTMRRLAQELDTGPASLYVYVANT 48 (68)
T ss_dssp CCCCHHHHHHHHHHHHHHH-----CSSSCCHHHHHHHTTSCHHHHTTTCCSH
T ss_pred ChhhHHHHHHHHHHHHHHh-----CcccCCHHHHHHHHCcCHhHhhHHCcCH
Confidence 34566664 2333456564 3566788999999999999999988875
No 54
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=58.87 E-value=1.3 Score=27.86 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=34.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 81 KITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
.+|+-|++.|.-.++-. ...++|.++||+.++|+.-..+=..|+.
T Consensus 12 ~LT~rE~~vl~~l~~G~----------s~~eIA~~l~iS~~TV~~~~~~i~~Klg 56 (70)
T d1yioa1 12 SLTGREQQVLQLTIRGL----------MNKQIAGELGIAEVTVKVHRHNIMQKLN 56 (70)
T ss_dssp TSCHHHHHHHHHHTTTC----------CHHHHHHHHTCCHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHcCC----------CHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 47888888888777322 4567999999999999988877666654
No 55
>d1p4wa_ a.4.6.2 (A:) Transcriptional regulator RcsB {Erwinia amylovora [TaxId: 552]}
Probab=58.84 E-value=3.2 Score=26.91 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=39.1
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 80 TKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
-.+|+-|.+.|.-+++-. ...++|..++|+.++|+.-.++=+.|++
T Consensus 21 ~~LT~rE~~vl~ll~~G~----------s~~eIA~~l~iS~~TV~~~~~~i~~Kl~ 66 (87)
T d1p4wa_ 21 KRLSPKESEVLRLFAEGF----------LVTEIAKKLNRSIKTISSQKKSAMMKLG 66 (87)
T ss_dssp SSCCHHHHHHHHHHHHTC----------CHHHHHHHHTSCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHcCC----------CHHHHHHHhCCCHHHHHHHHHHHHHHcC
Confidence 469999999999988654 5788999999999999998888777664
No 56
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.67 E-value=9.9 Score=23.60 Aligned_cols=47 Identities=6% Similarity=0.057 Sum_probs=33.3
Q ss_pred CccCCHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHhCCCccchhhh
Q 044959 79 RTKITEEQKSKMRRFADKL-GWKPQRHDEEEVGKFCGEVGITRKMFKVW 126 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~-GW~iq~~d~~~r~efc~eiGl~r~VvKVW 126 (159)
|+.||.+.=+.|.++-.+. .+....-....-++|+. ..+++++.+-|
T Consensus 2 R~~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~-~~~~~HtwQSw 49 (59)
T d1fexa_ 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEK-SSLTQHSWQSL 49 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHH-SCSSSCCSHHH
T ss_pred CCCCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHH-hcCCCCCHHHH
Confidence 8999999999999976553 11111223466778874 46899998888
No 57
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.61 E-value=4.1 Score=26.43 Aligned_cols=46 Identities=13% Similarity=0.090 Sum_probs=36.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHhCCCccchhhhh
Q 044959 81 KITEEQKSKMRRFADKLGWKPQ-RHDEEEVGKFCGEVGITRKMFKVWL 127 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~iq-~~d~~~r~efc~eiGl~r~VvKVWF 127 (159)
.+|++|++++.+.|.... .-. +.+..++.++-...||+..+|+..+
T Consensus 3 ~ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw 49 (95)
T d2jxca1 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVW 49 (95)
T ss_dssp SSCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHH
Confidence 378999999999999875 222 2567888888899999999887433
No 58
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=57.29 E-value=4.7 Score=25.10 Aligned_cols=51 Identities=14% Similarity=0.180 Sum_probs=33.9
Q ss_pred CCCccCCHHHHHHHHHHHHHhCCC-CCCCCHHHHHHHHHHhCCCc--cchhhhh
Q 044959 77 TKRTKITEEQKSKMRRFADKLGWK-PQRHDEEEVGKFCGEVGITR--KMFKVWL 127 (159)
Q Consensus 77 R~RTkFT~eQkekLe~ffek~GW~-iq~~d~~~r~efc~eiGl~r--~VvKVWF 127 (159)
..|..+|++|++.|.+.|...--. --+.+..+...+...+|.+. ..|+-+|
T Consensus 3 ~a~~~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~ 56 (81)
T d1avsa_ 3 EARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII 56 (81)
T ss_dssp SHHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HhhccCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHH
Confidence 457789999999998876654111 12467888888888877654 3344444
No 59
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=55.15 E-value=4.1 Score=26.18 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=13.5
Q ss_pred HHHHHHHhCCCccchhhhhcccc
Q 044959 109 VGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFqNrR 131 (159)
..+||+.|||++.+|.-|-.++|
T Consensus 17 q~~LA~~lGvs~~~is~ie~g~~ 39 (87)
T d2icta1 17 LREFARAMEIAPSTASRLLTGKA 39 (87)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSS
T ss_pred HHHHHHHHhhcHHHHHHHHHhcc
Confidence 34566666666666666665543
No 60
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=54.74 E-value=3.1 Score=25.35 Aligned_cols=28 Identities=11% Similarity=0.265 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|++.||++..|-..|.|+
T Consensus 20 G~~~~t~~~Ia~~agvs~~~iy~hF~~K 47 (68)
T d1z0xa1 20 TLEQLSMRKVAKQLGVQAPAIYWYFKNK 47 (68)
T ss_dssp CGGGCCHHHHHHHHTSCHHHHHTTCSSH
T ss_pred CccccCHHHHHHHHCcchhHHHHhcCCH
Confidence 3566789999999999999999999875
No 61
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=54.73 E-value=3 Score=25.58 Aligned_cols=40 Identities=20% Similarity=0.226 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 87 KSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 87 kekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
++...+.|.+.| .+...+.++|++.||++..|-..|.|+-
T Consensus 13 l~aa~~l~~~~G-----~~~~si~~Ia~~agvs~~t~Y~~F~~Ke 52 (76)
T d2fd5a1 13 LGAATQALLERG-----AVEPSVGEVMGAAGLTVGGFYAHFQSKD 52 (76)
T ss_dssp HHHHHHHHHHHT-----TTSCCHHHHHHHTTCCGGGGGGTCSCHH
T ss_pred HHHHHHHHHHhC-----cccccHHHHHHHhCCCccchhhcCCCHH
Confidence 344444555544 4556789999999999999999998753
No 62
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=54.16 E-value=2.1 Score=26.31 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=29.2
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+...+.+.+.| .+...+.++|++.||++.+|--.|-|+
T Consensus 11 ~aa~~l~~~~G-----~~~~t~~~Ia~~agvs~~~~y~~F~~k 48 (69)
T d2fq4a1 11 SASYELLLESG-----FKAVTVDKIAERAKVSKATIYKWWPNK 48 (69)
T ss_dssp HHHHHHHHHHC-----TTTCCHHHHHHHHTCCHHHHHHHCSSH
T ss_pred HHHHHHHHHhC-----cccCCHHHHHHHHCcCHHHHHHHCCCH
Confidence 33444555543 566788999999999999999999875
No 63
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=52.59 E-value=5.5 Score=24.13 Aligned_cols=47 Identities=19% Similarity=0.248 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHhCC--Cccchhhhhc
Q 044959 82 ITEEQKSKMRRFADKLGWKPQ-RHDEEEVGKFCGEVGI--TRKMFKVWLN 128 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq-~~d~~~r~efc~eiGl--~r~VvKVWFq 128 (159)
+|++|++.|.+.|...-..-. +.+..++......+|. ++..|+-+|.
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~ 51 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 51 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 689999999997776421111 2556788888888775 4666776664
No 64
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=52.06 E-value=3.1 Score=25.13 Aligned_cols=23 Identities=9% Similarity=0.133 Sum_probs=20.5
Q ss_pred HHHHHHHhCCCccchhhhhcccc
Q 044959 109 VGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFqNrR 131 (159)
..+||..+||+..++.-|..+++
T Consensus 17 q~elA~~~gis~~~is~~e~g~~ 39 (66)
T d1utxa_ 17 QSELAALLEVSRQTINGIEKNKY 39 (66)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTSC
T ss_pred HHHHHHhcccCHHHHHHHHcCCC
Confidence 57889999999999999998764
No 65
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=51.76 E-value=1.9 Score=27.98 Aligned_cols=49 Identities=18% Similarity=0.258 Sum_probs=30.3
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
|+..|+|+.+.-+.+.+++- -.... -..++||..+||+...|.-|-.++
T Consensus 1 r~P~t~e~~~~~~~lG~~ir--~~R~~-~t~~eLA~~~Gvs~~~ls~iE~G~ 49 (82)
T d2ofya1 1 RVPLTAEELERGQRLGELLR--SARGD-MSMVTVAFDAGISVETLRKIETGR 49 (82)
T ss_dssp CCCCCHHHHHHHHHHHHHHH--HHHTT-SCHHHHHHHHTCCHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHH--HHHHc-CCHHHHHHHHcCCHHHHHHHHcCC
Confidence 55677887766555544320 00011 133578999999998888888764
No 66
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=49.99 E-value=9 Score=23.51 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=26.9
Q ss_pred CCHHHH---HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhh
Q 044959 82 ITEEQK---SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKV 125 (159)
Q Consensus 82 FT~eQk---ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKV 125 (159)
||.+|. ++++..|...|. ....+.++|.++|+++..++-
T Consensus 1 ls~~q~~l~~~I~~~~~~~g~-----~PP~vrdl~~~l~~~e~~~~~ 42 (64)
T d1lvaa3 1 FSETQKKLLKDLEDKYRVSRW-----QPPSFKEVAGSFNLDPSELEE 42 (64)
T ss_dssp CCHHHHHHHHHHHHHHHHHTT-----SCCBHHHHHHHTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCC-----CCCcHHHHHHHhCCCHHHHHH
Confidence 566664 556667777652 233678899999999887654
No 67
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=49.66 E-value=3.4 Score=24.80 Aligned_cols=23 Identities=4% Similarity=0.149 Sum_probs=20.0
Q ss_pred HHHHHHHhCCCccchhhhhcccc
Q 044959 109 VGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFqNrR 131 (159)
.++||..+||+..+|--|-.+++
T Consensus 19 q~~lA~~~gvs~~ti~~~E~g~~ 41 (65)
T d2croa_ 19 QTELATKAGVKQQSIQLIEAGVT 41 (65)
T ss_dssp HHHHHHHHTSCHHHHHHHHTTCC
T ss_pred HHHHHHHHCcCHhHHHHHHCCCC
Confidence 67899999999999999986643
No 68
>d1otfa_ d.80.1.1 (A:) 4-oxalocrotonate tautomerase {Pseudomonas sp., DmpI [TaxId: 306]}
Probab=49.28 E-value=7.7 Score=23.07 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
.|.|||++|-+-. -+.+++.+|+++..|.|.|+
T Consensus 11 rs~eqK~~l~~~i--------------t~~~~~~~g~~~~~v~V~i~ 43 (59)
T d1otfa_ 11 RTDEQKETLIRQV--------------SEAMANSLDAPLERVRVLIT 43 (59)
T ss_dssp CCHHHHHHHHHHH--------------HHHHHHHHTCCGGGCEEEEE
T ss_pred CCHHHHHHHHHHH--------------HHHHHHHhCcCcccEEEEEE
Confidence 4789999887643 34578889999999988775
No 69
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=49.00 E-value=3.8 Score=24.85 Aligned_cols=24 Identities=13% Similarity=0.029 Sum_probs=20.8
Q ss_pred HHHHHHHHhCCCccchhhhhcccc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
..++||..+||++.+|--|-.+++
T Consensus 24 tq~~lA~~~gis~~~i~~~E~g~~ 47 (69)
T d1y7ya1 24 SQETLAFLSGLDRSYVGGVERGQR 47 (69)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCS
T ss_pred CHHHHHhHhCCCHHHHHHHHCCCC
Confidence 457899999999999999998764
No 70
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=48.04 E-value=1.7 Score=26.96 Aligned_cols=28 Identities=7% Similarity=0.159 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|+..||++..|-..|.|+
T Consensus 21 G~~~~ti~~Ia~~agvs~~s~y~~F~~K 48 (79)
T d2fbqa1 21 GFAETSLRLITSKAGVNLAAVNYHFGSK 48 (79)
T ss_dssp CSTTCCHHHHHHHHTSCHHHHHHHTCSH
T ss_pred CcccccHHHHHHHHCcChhHHHHHCcCH
Confidence 3567789999999999999999999875
No 71
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=47.67 E-value=2.2 Score=26.51 Aligned_cols=37 Identities=5% Similarity=0.155 Sum_probs=27.1
Q ss_pred HHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 89 KMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 89 kLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
...+.+.+.| .+...+.++|.+.||++.+|-.-|-|+
T Consensus 17 aa~~l~~~~G-----~~~~t~~~Ia~~agvs~~~~Y~~F~~k 53 (79)
T d2oi8a1 17 HAWEQIATAG-----ASALSLNAIAKRMGMSGPALYRYFDGR 53 (79)
T ss_dssp HHHHHHHHHC-----TTSCCHHHHHHHTTCCHHHHHTTCSSH
T ss_pred HHHHHHHHhC-----ccccCHHHHHHHhCCCCCchhhhcCCH
Confidence 3344555544 455568999999999999998877664
No 72
>d1j9ia_ a.6.1.5 (A:) Terminase gpNU1 subunit domain {Bacteriophage lambda [TaxId: 10710]}
Probab=47.61 E-value=3.6 Score=26.80 Aligned_cols=19 Identities=11% Similarity=0.328 Sum_probs=17.8
Q ss_pred HHHHHHHhCCCccchhhhh
Q 044959 109 VGKFCGEVGITRKMFKVWL 127 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWF 127 (159)
+.+||.-+||++.+|.-|.
T Consensus 5 k~~lA~iFGVS~~TI~~W~ 23 (68)
T d1j9ia_ 5 KKQLADIFGASIRTIQNWQ 23 (68)
T ss_dssp HHHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHhCCCHHHHHHHH
Confidence 5789999999999999996
No 73
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=47.20 E-value=4 Score=24.19 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=19.7
Q ss_pred HHHHHHHHhCCCccchhhhhccc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..++||..+||++.+|.-|..++
T Consensus 16 sq~elA~~~gvs~~~is~~E~g~ 38 (63)
T d1r69a_ 16 NQAELAQKVGTTQQSIEQLENGK 38 (63)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTS
T ss_pred cHHHHHHHhCcCHHHHHHHHCCC
Confidence 35679999999999999998653
No 74
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=47.16 E-value=3.3 Score=24.95 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 87 KSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 87 kekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
++...+.+.+.| .+...+.++|.++||++.+|-..|.|+
T Consensus 6 l~aa~~l~~~~G-----~~~~si~~Ia~~agvs~~t~Y~~F~sK 44 (70)
T d2gena1 6 LQAALACFSEHG-----VDATTIEMIRDRSGASIGSLYHHFGNK 44 (70)
T ss_dssp HHHHHHHHHHHC-----TTTCCHHHHHHHHCCCHHHHHHHTCSH
T ss_pred HHHHHHHHHHhC-----cccCCHHHHHHHHCcCHHHHHHHCCCH
Confidence 344455555644 566788999999999999999999875
No 75
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.57 E-value=9.5 Score=27.76 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=26.4
Q ss_pred HHHHHHHHHhCCCCCCCC--HHHHHHHHHHhCCCccch
Q 044959 88 SKMRRFADKLGWKPQRHD--EEEVGKFCGEVGITRKMF 123 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d--~~~r~efc~eiGl~r~Vv 123 (159)
+.|++||.+..=.|.+.. ...-+++|..|||++=..
T Consensus 22 ~~L~~FA~kH~~eI~~np~FR~~F~~MC~~iGVDPLas 59 (145)
T d1u5ta1 22 ERLVEFAKKHNSELQASPEFRSKFMHMCSSIGIDPLSL 59 (145)
T ss_dssp HHHHHHHHHCTTTTTTCHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHhCCChhhc
Confidence 467889999765555533 467788899999998543
No 76
>d2ao9a1 a.4.1.17 (A:13-132) Phage protein BC1890 {Bacillus cereus [TaxId: 1396]}
Probab=46.32 E-value=4.8 Score=28.80 Aligned_cols=45 Identities=18% Similarity=0.309 Sum_probs=32.8
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCC---CCHHHHHHHHHHhCCCccchhhhh
Q 044959 80 TKITEEQKSKMRRFADKLGWKPQR---HDEEEVGKFCGEVGITRKMFKVWL 127 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~iq~---~d~~~r~efc~eiGl~r~VvKVWF 127 (159)
.++|.+|++.-+-.++.- +.- ....+.+++|+++||++.++=-|=
T Consensus 10 ~~L~~~q~~AA~~l~~Ne---~~~~~~~ekktqeqiAeelGisr~tLyrWr 57 (120)
T d2ao9a1 10 QKLTAKQIQAAYLLVENE---LMESNNEEKRTQDEMANELGINRTTLWEWR 57 (120)
T ss_dssp TTSCHHHHHHHHHHHHHH---HCC---CCCCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHhhHHHHHHHHHHhhch---hccccchhhhhHHHHHHHhChhHHHHHHHh
Confidence 467888888777666552 111 123467899999999999999997
No 77
>d1s0ya_ d.80.1.1 (A:) Trans-3-chloroacrylic acid dehalogenase alpha-subunit, CaaD1 {Pseudomonas pavonaceae [TaxId: 47881]}
Probab=45.12 E-value=9.8 Score=22.86 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
.|.|||++|-+-. -+.+++.+|+++..+.|.|+
T Consensus 11 rt~eqK~~l~~~i--------------t~~~~~~~g~~~e~v~V~i~ 43 (62)
T d1s0ya_ 11 RTDEQKRALSAGL--------------LRVISEATGEPRENIFFVIR 43 (62)
T ss_dssp CCHHHHHHHHHHH--------------HHHHHHHHCCCGGGCEEEEE
T ss_pred CCHHHHHHHHHHH--------------HHHHHHHhCcCcccEEEEEE
Confidence 4899999887644 34578889999999998876
No 78
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=44.49 E-value=4.8 Score=24.32 Aligned_cols=28 Identities=11% Similarity=0.163 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|...||++..|-..|.|+
T Consensus 22 G~~~~t~~~Ia~~agvs~~~~y~~F~~k 49 (75)
T d3c07a1 22 GYDRTTMRAIAQEAGVSVGNAYYYFAGK 49 (75)
T ss_dssp CSTTCCHHHHHHHHTSCHHHHHHHCSSH
T ss_pred CcccCCHHHHHHHHCcCHHHHHHHCcCH
Confidence 3566789999999999999999999875
No 79
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=44.39 E-value=3.9 Score=24.72 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|.++||++.+|-..|-|+
T Consensus 20 G~~~~t~~~Ia~~agvs~~t~Y~~F~~K 47 (73)
T d1t56a1 20 PLADISVDDLAKGAGISRPTFYFYFPSK 47 (73)
T ss_dssp CGGGCCHHHHHHHHTCCHHHHHHHCSSH
T ss_pred CcccCCHHHHHHHhCCCHHHHHHHCcCH
Confidence 4566789999999999999999998874
No 80
>d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]}
Probab=44.14 E-value=17 Score=23.17 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=27.8
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Q 044959 80 TKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCG 114 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~ 114 (159)
-.++.++++-+.++|.+.| ..|++.++.-||+
T Consensus 28 LaL~~~e~~~i~~~f~~~~---R~PTd~EL~~~aQ 59 (68)
T d1t3ta1 28 LALAEDEIDYLQEAFTKLG---RNPNDIELYMFAQ 59 (68)
T ss_dssp CCCCHHHHHHHHHHHHHHT---SCCBHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcC---CCCCHHHHHHHhh
Confidence 5688999999999998887 7799999999986
No 81
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=43.11 E-value=5.7 Score=24.18 Aligned_cols=22 Identities=9% Similarity=0.184 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCccchhhhhc
Q 044959 107 EEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 107 ~~r~efc~eiGl~r~VvKVWFq 128 (159)
-.+++||.++||++++|+-=++
T Consensus 23 vs~~~La~~l~VS~~TI~rdi~ 44 (65)
T d1j5ya1 23 VSGAQLAEELSVSRQVIVQDIA 44 (65)
T ss_dssp BCHHHHHHHHTSCHHHHHHHHH
T ss_pred CcHHHHHHHHCCCHHHHHHHHH
Confidence 3578999999999999875443
No 82
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=42.31 E-value=13 Score=22.52 Aligned_cols=37 Identities=11% Similarity=0.193 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 84 EEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 84 ~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
.-+++.+....+..||. +.+-|..|||++.+|.-.|.
T Consensus 19 ~~Er~~I~~aL~~~~gn--------~~~aA~~LGIsR~TL~rkmk 55 (60)
T d1umqa_ 19 RVRWEHIQRIYEMCDRN--------VSETARRLNMHRRTLQRILA 55 (60)
T ss_dssp HHHHHHHHHHHHHTTSC--------HHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCc--------HHHHHHHHCCCHHHHHHHHH
Confidence 34555666677776664 57899999999999987764
No 83
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=41.23 E-value=4.4 Score=24.71 Aligned_cols=28 Identities=7% Similarity=0.233 Sum_probs=24.5
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...++.+|++.||++..|--+|.|+
T Consensus 22 G~~~~si~~Ia~~agvs~~~~y~~F~sK 49 (71)
T d1ui5a1 22 GYESTTLSEIVAHAGVTKGALYFHFAAK 49 (71)
T ss_dssp CTTTCCHHHHHHHHTCCHHHHHHHCSSH
T ss_pred CccccCHHHHHHHHCcCHhHHHHHCcCH
Confidence 3566788999999999999999999875
No 84
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]}
Probab=41.04 E-value=7.6 Score=25.77 Aligned_cols=22 Identities=27% Similarity=0.297 Sum_probs=18.9
Q ss_pred CCCHHHHHHHHHHhCCCccchh
Q 044959 103 RHDEEEVGKFCGEVGITRKMFK 124 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvK 124 (159)
..+.++|.++|+++||+..++.
T Consensus 171 ~l~K~eV~~lA~~lglP~~i~~ 192 (197)
T d1gpma1 171 ELFKDEVRKIGLELGLPYDMLY 192 (197)
T ss_dssp TCCHHHHHHHHHHTTCCHHHHT
T ss_pred CCcHHHHHHHHHHcCCCHHHhC
Confidence 4678999999999999988763
No 85
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=41.03 E-value=4.2 Score=25.19 Aligned_cols=37 Identities=11% Similarity=0.243 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 89 KMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 89 kLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
...+.|...| .+...+.++|...||++..|=-.|.|+
T Consensus 19 aa~~l~~~~G-----~~~~ti~~Ia~~agvs~~t~Y~~F~~K 55 (81)
T d1rkta1 19 AAKTVFKRKG-----FELTTMKDVVEESGFSRGGVYLYFSST 55 (81)
T ss_dssp HHHHHHHHHC-----STTCCHHHHHHHHTSCHHHHHTTCSCH
T ss_pred HHHHHHHHhC-----cccCCHHHHHHHhCcCHHHHHHHCcCH
Confidence 3344555543 556688999999999999999999875
No 86
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=40.25 E-value=3.6 Score=24.69 Aligned_cols=38 Identities=11% Similarity=0.192 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+...+.+.+.| .+...+.++|++.||++..|-..|-|+
T Consensus 8 ~aa~~l~~~~G-----~~~~ti~~Ia~~agvs~~~iy~~F~sK 45 (69)
T d2np5a1 8 AALFDVAAESG-----LEGASVREVAKRAGVSIGAVQHHFSTK 45 (69)
T ss_dssp HHHHHHHHHHC-----GGGCCHHHHHHHHTCCHHHHHHHCSSH
T ss_pred HHHHHHHHHhC-----ccccCHHHHHHHhCCCHHHHHHHCcCH
Confidence 34455666644 556688999999999999999999775
No 87
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.01 E-value=8.8 Score=25.81 Aligned_cols=19 Identities=11% Similarity=0.225 Sum_probs=16.6
Q ss_pred CccCCHHHHHHHHHHHHHh
Q 044959 79 RTKITEEQKSKMRRFADKL 97 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~ 97 (159)
=|.||++|++.|...|...
T Consensus 7 ~t~ft~eei~~l~~~F~~~ 25 (165)
T d1auib_ 7 CSHFDADEIKRLGKRFKKL 25 (165)
T ss_dssp CCSCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHH
Confidence 4889999999999988764
No 88
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=39.35 E-value=5.2 Score=24.78 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=24.2
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|++.||++..|-..|.|+
T Consensus 24 G~~~~t~~~Ia~~agvs~~t~y~~F~sK 51 (78)
T d2o7ta1 24 HHDSLTMENIAEQAGVGVATLYRNFPDR 51 (78)
T ss_dssp CGGGCCHHHHHHHHTCCHHHHHHHCSSH
T ss_pred CccccCHHHHHHHhCCCHHHHHHHCcCH
Confidence 3567789999999999999999999875
No 89
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=38.91 E-value=5.3 Score=26.15 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCccchhhhhc
Q 044959 108 EVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFq 128 (159)
.+.+||..+||+.++|+.|=.
T Consensus 4 tI~e~A~~~gvs~~tlR~Ye~ 24 (109)
T d1r8da_ 4 QVKQVAEISGVSIRTLHHYDN 24 (109)
T ss_dssp CHHHHHHHHSCCHHHHHHHHH
T ss_pred cHHHHHHHHCcCHHHHHHHHH
Confidence 367899999999999999974
No 90
>d1ae9a_ d.163.1.1 (A:) Integrase (Int) {Bacteriophage lambda [TaxId: 10710]}
Probab=38.66 E-value=13 Score=23.79 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=24.2
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCC
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGIT 119 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~ 119 (159)
|..+|.||.++|.+.++.. .+.....-.|+-..|+-
T Consensus 1 R~~lt~ee~~~l~~~~~~~-----~~~~~~~~~l~~~tG~R 36 (179)
T d1ae9a_ 1 RSRLTADEYLKIYQAAESS-----PCWLRLAMELAVVTGQR 36 (179)
T ss_dssp CCCCCHHHHHHHHHHGGGS-----CHHHHHHHHHHHHHCCC
T ss_pred CCCCCHHHHHHHHHHHhhC-----CHHHHHHHHHHHHhCCC
Confidence 5569999999999998773 22233344466666653
No 91
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=38.65 E-value=6.9 Score=23.90 Aligned_cols=23 Identities=9% Similarity=0.138 Sum_probs=20.1
Q ss_pred HHHHHHHHhCCCccchhhhhccc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..++||..+||++.+|.-|....
T Consensus 25 tq~~lA~~~gis~~~i~~~e~g~ 47 (77)
T d2b5aa1 25 SQEELADLAGLHRTYISEVERGD 47 (77)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTC
T ss_pred CHHHHHHHHCCCHHHHHHHHcCC
Confidence 46789999999999999998764
No 92
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=38.42 E-value=13 Score=25.26 Aligned_cols=22 Identities=14% Similarity=0.531 Sum_probs=20.1
Q ss_pred cCCHHHHHHHHH-HHHHhCCCCC
Q 044959 81 KITEEQKSKMRR-FADKLGWKPQ 102 (159)
Q Consensus 81 kFT~eQkekLe~-ffek~GW~iq 102 (159)
.||.+++.+||. .-..++|++|
T Consensus 110 ~~t~~ei~~mE~~IL~~L~w~l~ 132 (132)
T d1g3nc1 110 SFSRQELIDQEKELLEKLAWRTE 132 (132)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCcCC
Confidence 599999999999 8899999986
No 93
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.13 E-value=36 Score=20.20 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=35.1
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHh-CCCccchhhhhcccc
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEV-GITRKMFKVWLNNNR 131 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~ei-Gl~r~VvKVWFqNrR 131 (159)
+|.+++.|+++.+.+.+.+...| .+ -..+|+.| |=+..+|+.-|.+.+
T Consensus 2 ~k~~~~WT~eE~~~f~~~~~~~G-----~~---w~~Ia~~~~~kt~~q~~~~y~~~~ 50 (65)
T d2iw5b1 2 QKCNARWTTEEQLLAVQAIRKYG-----RD---FQAISDVIGNKSVVQVKNFFVNYR 50 (65)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHS-----SC---HHHHHHHHSSCCHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhC-----ch---HHHHHHHcCCCCHHHHHHHHHHHH
Confidence 56778999999999999998875 34 55556666 466667776666554
No 94
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=37.91 E-value=4.2 Score=24.99 Aligned_cols=27 Identities=7% Similarity=0.155 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 104 HDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 104 ~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
.....+.++|+++||++.+|-..|.|+
T Consensus 24 ~~~~s~~~Ia~~agvs~~~lY~~F~~K 50 (77)
T d2gfna1 24 ISAVTTRAVAEESGWSTGVLNHYFGSR 50 (77)
T ss_dssp GGGCCHHHHHHHHSSCHHHHHHHTSSH
T ss_pred ccccCHHHHHHHHCCCHHHHHHHCcCH
Confidence 556688999999999999999999875
No 95
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.24 E-value=3.7 Score=23.87 Aligned_cols=40 Identities=3% Similarity=0.092 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcc
Q 044959 85 EQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNN 129 (159)
Q Consensus 85 eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqN 129 (159)
+.++++.+|-+. ++...-.++++|+.+|+++..|.-=|+.
T Consensus 3 ~ii~~i~~yi~~-----~~~~~itl~~lA~~~~~S~~~l~r~Fk~ 42 (54)
T d1d5ya1 3 GIIRDLLIWLEG-----HLDQPLSLDNVAAKAGYSKWHLQRMFKD 42 (54)
T ss_dssp HHHHHHHHHHHT-----TSSSSCCCHHHHTTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----ccCCCCCHHHHHHHHCcCHHHHHHHHHH
Confidence 456777778777 3666678899999999999998876653
No 96
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=36.58 E-value=6.1 Score=26.12 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=18.4
Q ss_pred HHHHHHHhCCCccchhhhhc
Q 044959 109 VGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFq 128 (159)
+-++|..+||+.++|+.|-.
T Consensus 6 I~evA~~~gvs~~tlR~Ye~ 25 (118)
T d1r8ea1 6 IGEVSKLANVSIKALRYYDK 25 (118)
T ss_dssp HHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHH
Confidence 67899999999999999984
No 97
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=36.36 E-value=9.6 Score=23.13 Aligned_cols=38 Identities=8% Similarity=0.239 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
+...+.|.+.| + + ..+++++...||+...|=-+|.|+-
T Consensus 8 ~aA~~l~~~~G----~-~-~t~~~Ia~~agvs~~~~Y~~F~~K~ 45 (70)
T d2hkua1 8 TAATELFLEHG----E-G-VPITQICAAAGAHPNQVTYYYGSKE 45 (70)
T ss_dssp HHHHHHHHHHC----T-T-SCHHHHHHHHTCCHHHHHHHHSSHH
T ss_pred HHHHHHHHhcc----c-C-chHHHHHHHHCCChhhHHhcCCCHH
Confidence 33444455544 4 4 4799999999999999999998753
No 98
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=36.34 E-value=5.7 Score=24.19 Aligned_cols=38 Identities=8% Similarity=0.199 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+...+.+...| .+...+.++|++.||++.+|--.|.|+
T Consensus 11 ~aa~~l~~~~G-----~~~~ti~~Ia~~agvs~~t~y~~F~~K 48 (72)
T d1pb6a1 11 SAALDTFSQFG-----FHGTRLEQIAELAGVSKTNLLYYFPSK 48 (72)
T ss_dssp HHHHHHHHHHC-----TTTCCHHHHHHHTTSCHHHHHHHSSSH
T ss_pred HHHHHHHHHhC-----ccccCHHHHHHHhCCChHHHHHHCcCH
Confidence 33344555544 455678999999999999999999874
No 99
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.05 E-value=38 Score=19.87 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=30.1
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhC
Q 044959 75 AKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVG 117 (159)
Q Consensus 75 kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiG 117 (159)
.+..+..+|.|+-+.|++.....| ..+...-..+|..|+
T Consensus 8 ~~~~~~~WT~eEd~~L~~~v~~~~----~~~~~~W~~IA~~l~ 46 (60)
T d2cqra1 8 ARSAEEPWTQNQQKLLELALQQYP----RGSSDCWDKIARCVP 46 (60)
T ss_dssp TTCSSCCCCHHHHHHHHHHHHHSC----SSSHHHHHHHGGGCS
T ss_pred CCcCCCCcCHHHHHHHHHHHHHcC----CccchHHHHHHHHcC
Confidence 466677899999999999887753 344566788888884
No 100
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=35.81 E-value=10 Score=25.72 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=32.7
Q ss_pred CCHHHHHHHHH-HHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCC
Q 044959 82 ITEEQKSKMRR-FADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRP 134 (159)
Q Consensus 82 FT~eQkekLe~-ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~ 134 (159)
+++.|++.+.- |++.. ..+++|..+||++..|+.=++.-+.++
T Consensus 17 Lp~~qR~v~~L~y~~~l----------s~~EIA~~lgiS~~aV~~~l~RA~~~L 60 (106)
T d1s7oa_ 17 LTDKQMNYIELYYADDY----------SLAEIADEFGVSRQAVYDNIKRTEKIL 60 (106)
T ss_dssp SCHHHHHHHHHHHHTCC----------CHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCC----------CHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 67888888877 44332 567899999999999998777665554
No 101
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=35.66 E-value=8.3 Score=23.24 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
+...+.|...| .+...+.++|.+.||++..|-.-|.|.|
T Consensus 9 ~aa~~l~~~~G-----~~~~si~~Ia~~agvs~~~iy~~F~~~K 47 (73)
T d1sgma1 9 HTASRLSQLQG-----YHATGLNQIVKESGAPKGSLYHFFPNGK 47 (73)
T ss_dssp HHHHHHHHHHC-----TTTCCHHHHHHHHCCCSCHHHHSTTTCH
T ss_pred HHHHHHHHHhC-----cccCCHHHHHHHhCCCHHHHHHHcCCCH
Confidence 34445565644 5566789999999999999999987754
No 102
>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}
Probab=35.22 E-value=29 Score=24.90 Aligned_cols=49 Identities=4% Similarity=-0.030 Sum_probs=35.3
Q ss_pred CccCCHHHHHH----HHHHHHHhCCCC-----------------------CCCCHHHHHHHHHHhCCCccchhhhhcc
Q 044959 79 RTKITEEQKSK----MRRFADKLGWKP-----------------------QRHDEEEVGKFCGEVGITRKMFKVWLNN 129 (159)
Q Consensus 79 RTkFT~eQkek----Le~ffek~GW~i-----------------------q~~d~~~r~efc~eiGl~r~VvKVWFqN 129 (159)
|-.||.++.+. |.+.+...|..+ .||+.....+.++++||+.. ++||=.
T Consensus 78 ~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~--~~~~VG 153 (209)
T d2o2xa1 78 RGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQ--RSLIVG 153 (209)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGG--GCEEEE
T ss_pred hhhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCcc--ceEEeC
Confidence 45788888765 455566666543 38999999999999999876 456643
No 103
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.02 E-value=8.1 Score=24.00 Aligned_cols=30 Identities=10% Similarity=0.292 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 106 EEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 106 ~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
....+.+|++.|++..+++-||.+++-..-
T Consensus 26 ~kl~~~y~~~~~~~~~~~~f~fdG~~l~~~ 55 (77)
T d2uyzb1 26 KKLKESYCQRQGVPMNSLRFLFEGQRIADN 55 (77)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEETTEECCTT
T ss_pred HHHHHHHHHHhCCChhHEEEEECCEECCCC
Confidence 567788999999999999999999887543
No 104
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=34.57 E-value=30 Score=21.29 Aligned_cols=48 Identities=21% Similarity=0.282 Sum_probs=32.5
Q ss_pred cCCHHHHHHHHHHHHHhCCC--CCCCCHHHHHHHHHHhCCC--ccchhhhhc
Q 044959 81 KITEEQKSKMRRFADKLGWK--PQRHDEEEVGKFCGEVGIT--RKMFKVWLN 128 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~--iq~~d~~~r~efc~eiGl~--r~VvKVWFq 128 (159)
.+|++|++.+++.|...-=. --+.+..+.......+|++ ...|+-+|.
T Consensus 8 ~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~ 59 (82)
T d1wrka1 8 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMID 59 (82)
T ss_dssp HCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 58999999998866532101 1267888888888998764 445555554
No 105
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=34.12 E-value=7 Score=26.20 Aligned_cols=34 Identities=18% Similarity=0.341 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCccchhhhhccccCCCCC-CCCCcccc
Q 044959 109 VGKFCGEVGITRKMFKVWLNNNRRRPVP-VRVPEKCR 144 (159)
Q Consensus 109 r~efc~eiGl~r~VvKVWFqNrR~k~kk-~~~~~~~~ 144 (159)
|-+||+.+||+.++|+.|=..- -..+ .|.+|+-+
T Consensus 3 Ige~A~~~gvs~~TlR~Ye~~G--Ll~p~~r~~~gyR 37 (127)
T d1q06a_ 3 ISDVAKITGLTSKAIRFYEEKG--LVTPPMRSENGYR 37 (127)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTT--CSCCCEECTTSCE
T ss_pred HHHHHHHHCcCHHHHHHHHHcC--CCCCCccCCcCcc
Confidence 6789999999999999997653 3333 24445443
No 106
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=33.97 E-value=6.9 Score=23.72 Aligned_cols=28 Identities=7% Similarity=0.115 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 104 HDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 104 ~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
.+...+..+|.+.||++..|--+|.|+-
T Consensus 20 ~~~~ti~~Ia~~agvs~~~ly~~F~~K~ 47 (72)
T d2g3ba1 20 IRGLRVNDVAEVAGVSPGLLYYHFKDRI 47 (72)
T ss_dssp HHHCCHHHHHHHHTSCHHHHHHHHCSHH
T ss_pred cccCCHHHHHHHhCcCHHHHHHHCcCHH
Confidence 5677899999999999999999998853
No 107
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=33.91 E-value=8.9 Score=23.16 Aligned_cols=39 Identities=3% Similarity=0.081 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 87 KSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 87 kekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
++...+.|... ......++++|...||++..|---|.|+
T Consensus 10 l~aa~~l~~~~-----G~~~~s~~~Ia~~agvs~~t~Y~~F~~K 48 (74)
T d1v7ba1 10 LRTAIDYIGEY-----SLETLSYDSLAEATGLSKSGLIYHFPSR 48 (74)
T ss_dssp HHHHHHHHHHS-----CSTTCCHHHHHHHHCSCHHHHHHHCSSH
T ss_pred HHHHHHHHHHh-----CccccCHHHHHHHhCcCcchHhhhCCCH
Confidence 34455556563 4566788999999999999999888875
No 108
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=33.22 E-value=7.3 Score=23.47 Aligned_cols=28 Identities=4% Similarity=0.039 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|...||++..|-..|.|+
T Consensus 18 G~~~~s~~~Ia~~agvs~~~~y~~F~~K 45 (71)
T d1jt6a1 18 GYNATTTGEIVKLSESSKGNLYYHFKTK 45 (71)
T ss_dssp CTTTCCHHHHHHHTTCCHHHHHHHHSSH
T ss_pred CccccCHHHHHHHHCcCHhHHHHHCcCH
Confidence 3566789999999999999999999875
No 109
>d1k81a_ g.59.1.1 (A:) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=32.64 E-value=4.2 Score=23.49 Aligned_cols=16 Identities=38% Similarity=0.858 Sum_probs=12.4
Q ss_pred CCcccccccccccccc
Q 044959 31 GTKEAFHCAACGCHRS 46 (159)
Q Consensus 31 ~~~~~l~CaaCgcHRn 46 (159)
+-.--|+|.|||-.|+
T Consensus 17 ~R~~~l~C~aCGa~r~ 32 (36)
T d1k81a_ 17 GRVHLLKCMACGAIRP 32 (36)
T ss_dssp TTEEEEEEETTTEEEE
T ss_pred CCEEEEEeccCCCCCc
Confidence 3455789999998875
No 110
>d2ezla_ a.4.1.2 (A:) Ibeta subdomain of the mu end DNA-binding domain of phage mu transposase {Bacteriophage mu [TaxId: 10677]}
Probab=32.62 E-value=18 Score=24.58 Aligned_cols=39 Identities=5% Similarity=0.048 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 85 EQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 85 eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
+-+.+++.+ +..| -+-...+++.|.+.||+..+|+-|+.
T Consensus 37 ~~l~~V~~L-~~~G----~~~~~A~~~VA~~~~vs~~TL~nW~~ 75 (99)
T d2ezla_ 37 PAVQAADEM-LNQG----ISTKTAFATVAGHYQVSASTLRDKYY 75 (99)
T ss_dssp HHHHHHHHH-HHTT----CCHHHHHHHHHHHSSSCHHHHHHHHH
T ss_pred HHHHHHHHH-HHcC----CcHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 334444444 4434 34467899999999999999999997
No 111
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=32.42 E-value=23 Score=23.91 Aligned_cols=42 Identities=10% Similarity=-0.017 Sum_probs=29.3
Q ss_pred CccCCHHHHHHHHHHHHHhCCC---CCCCCHHHHHHHHHHhCCCc
Q 044959 79 RTKITEEQKSKMRRFADKLGWK---PQRHDEEEVGKFCGEVGITR 120 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~---iq~~d~~~r~efc~eiGl~r 120 (159)
+|.||.+|++.|.+.|.++-.. -.+.+..+.+.+-..++...
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~ 52 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKE 52 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCC
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCC
Confidence 6999999999999988764321 22566666666666666554
No 112
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.63 E-value=48 Score=21.39 Aligned_cols=49 Identities=6% Similarity=0.120 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHHHhCC-CCCCCCHHHHHHHHHHhCCC---ccchhhhhccc
Q 044959 82 ITEEQKSKMRRFADKLGW-KPQRHDEEEVGKFCGEVGIT---RKMFKVWLNNN 130 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW-~iq~~d~~~r~efc~eiGl~---r~VvKVWFqNr 130 (159)
||++|++.|++.|...-= ..-+.+..+...+-..+|.. ...+...+.+.
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~ 53 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA 53 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHHHHHHHHhc
Confidence 899999999887765310 11235667777777777744 44566665543
No 113
>d1x57a1 a.35.1.12 (A:8-85) Endothelial differentiation-related factor 1, EDF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.34 E-value=9.6 Score=23.75 Aligned_cols=24 Identities=0% Similarity=0.051 Sum_probs=21.2
Q ss_pred HHHHHHHHhCCCccchhhhhcccc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
...+||..+||+..+|.-|-.+++
T Consensus 21 tq~~lA~~~gis~~~is~~E~G~~ 44 (78)
T d1x57a1 21 TQKDLATKINEKPQVIADYESGRA 44 (78)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred ChhHHHHcCCCCHHHHHHHHccCC
Confidence 467899999999999999998865
No 114
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=31.07 E-value=8.2 Score=23.22 Aligned_cols=28 Identities=7% Similarity=0.147 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..+...+.++|+..||++..|--.|.|+
T Consensus 17 G~~~~ti~~Ia~~agvs~~~~Y~~F~~K 44 (69)
T d2i10a1 17 GYEGTSITDLTKALGINPPSLYAAFGSK 44 (69)
T ss_dssp TTTTCCHHHHHHHHTCCHHHHHHHHCSH
T ss_pred CcccCCHHHHHHHhCCChhHHHHHCcCH
Confidence 3566678999999999999999999875
No 115
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.76 E-value=31 Score=22.93 Aligned_cols=29 Identities=10% Similarity=0.282 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHh
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEV 116 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~ei 116 (159)
||+||+++-+.|=.. ....+.+..|++.+
T Consensus 1 Fs~eQ~~RyE~fRRs------~~~K~~vkrl~~~~ 29 (89)
T d1bh9b_ 1 FSEEQLNRYEMYRRS------AFPKAAIKRLIQSI 29 (89)
T ss_dssp CCHHHHHHHHHHHHC------CCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh------hCCHHHHHHHHHHH
Confidence 899999887665422 35555666666553
No 116
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=30.67 E-value=10 Score=25.73 Aligned_cols=44 Identities=9% Similarity=0.168 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccccCCC
Q 044959 82 ITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNNRRRP 134 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNrR~k~ 134 (159)
+++.|++.+.-++- ++-...++|..+||++..|+.=++.-+.++
T Consensus 19 Lpe~QR~vl~L~~~---------e~ls~~EIA~~lgiS~~aV~~~l~Ra~~~L 62 (106)
T d1xsva_ 19 LTNKQRNYLELFYL---------EDYSLSEIADTFNVSRQAVYDNIRRTGDLV 62 (106)
T ss_dssp SCHHHHHHHHHHHT---------SCCCHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH---------hCCcHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 67888888877441 122467889999999999987666554443
No 117
>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
Probab=30.20 E-value=11 Score=23.39 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCccchhhhhccccCCCCC
Q 044959 106 EEEVGKFCGEVGITRKMFKVWLNNNRRRPVP 136 (159)
Q Consensus 106 ~~~r~efc~eiGl~r~VvKVWFqNrR~k~kk 136 (159)
....+.+|++.|++...++.+|..++-..-.
T Consensus 27 ~~l~~~~~~~~~i~~~~~~l~f~G~~l~~~~ 57 (79)
T d1euvb_ 27 RRLMEAFAKRQGKEMDSLRFLYDGIRIQADQ 57 (79)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEETTEECCTTC
T ss_pred HHHHHHHHHHhCCChHhEEEEECCEEeCCCC
Confidence 5678889999999999999999988875543
No 118
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=30.19 E-value=61 Score=20.78 Aligned_cols=48 Identities=13% Similarity=0.218 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHhCC-CCCCCCHHHHHHHHHHhCCCc--cchhhhhcc
Q 044959 82 ITEEQKSKMRRFADKLGW-KPQRHDEEEVGKFCGEVGITR--KMFKVWLNN 129 (159)
Q Consensus 82 FT~eQkekLe~ffek~GW-~iq~~d~~~r~efc~eiGl~r--~VvKVWFqN 129 (159)
+|++|++.|++.|...-. .-.+.+..+...+-+.+|+.. ..|+..|.+
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~~ 51 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE 51 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHHh
Confidence 488999999997765321 122367788888888877654 456666654
No 119
>d1aopa1 d.58.36.1 (A:81-145) Sulfite reductase, domains 1 and 3 {Escherichia coli [TaxId: 562]}
Probab=30.03 E-value=20 Score=21.75 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=15.9
Q ss_pred cCCHHHHHHHHHHHHHhC
Q 044959 81 KITEEQKSKMRRFADKLG 98 (159)
Q Consensus 81 kFT~eQkekLe~ffek~G 98 (159)
.+|++|+..|-+.+++.|
T Consensus 10 ~it~~ql~~la~ia~kyg 27 (65)
T d1aopa1 10 VITTKQWQAIDKFAGENT 27 (65)
T ss_dssp EEEHHHHHHHHHHHHHHB
T ss_pred CcCHHHHHHHHHHHHHhc
Confidence 479999999999999875
No 120
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=29.84 E-value=13 Score=22.83 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=29.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchh
Q 044959 81 KITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFK 124 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvK 124 (159)
.+++.+.+.|..+|-- ........+++|..+||++..|.
T Consensus 8 ~L~~rer~Ii~~ryGl-----~~~~~~tl~eIa~~lgiS~erVr 46 (61)
T d1ku3a_ 8 KLSEREAMVLKMRKGL-----IDGREHTLEEVGAYFGVTRERIR 46 (61)
T ss_dssp TSCHHHHHHHHHHHTT-----TTSSCCCHHHHHHHHTCCHHHHH
T ss_pred cCCHHHHHHHHHHhCC-----CCCCCCCHHHHHHHHCCCHHHHH
Confidence 4788999999998822 12334578899999999988764
No 121
>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.46 E-value=6.1 Score=26.33 Aligned_cols=48 Identities=15% Similarity=0.015 Sum_probs=35.2
Q ss_pred ccCCHHHHHHHHHHHHHhCC-CCCCCCHHHHHHHHHHhCCCccchhhhh
Q 044959 80 TKITEEQKSKMRRFADKLGW-KPQRHDEEEVGKFCGEVGITRKMFKVWL 127 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW-~iq~~d~~~r~efc~eiGl~r~VvKVWF 127 (159)
-.+|++|++.+.+.|...-= .--+.+..++.+|-...||+..+|+..+
T Consensus 14 ~~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw 62 (110)
T d1iq3a_ 14 WRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIW 62 (110)
T ss_dssp CCCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHH
T ss_pred CccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHH
Confidence 47999999999998877520 0112456788888888999999998433
No 122
>d1j2oa2 g.39.1.3 (A:31-63) Rhombotin-2 (Lmo2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.24 E-value=6.5 Score=22.33 Aligned_cols=9 Identities=44% Similarity=1.553 Sum_probs=7.4
Q ss_pred ccccccccc
Q 044959 36 FHCAACGCH 44 (159)
Q Consensus 36 l~CaaCgcH 44 (159)
|+|..|+|-
T Consensus 1 LkC~cC~cR 9 (33)
T d1j2oa2 1 LSCDLCGCR 9 (33)
T ss_dssp CCCSSSCSC
T ss_pred Ccccccccc
Confidence 689999994
No 123
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.02 E-value=23 Score=20.77 Aligned_cols=21 Identities=29% Similarity=0.308 Sum_probs=18.4
Q ss_pred CCccCCHHHHHHHHHHHHHhC
Q 044959 78 KRTKITEEQKSKMRRFADKLG 98 (159)
Q Consensus 78 ~RTkFT~eQkekLe~ffek~G 98 (159)
+|.+||+|+-+.|.+..++.|
T Consensus 1 Kr~~WT~eEd~~L~~~V~~~G 21 (55)
T d1w0ua_ 1 KKQKWTVEESEWVKAGVQKYG 21 (55)
T ss_dssp CCCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHhC
Confidence 467899999999999998875
No 124
>d1gt1a_ b.60.1.1 (A:) Odorant-binding protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=28.98 E-value=16 Score=24.35 Aligned_cols=20 Identities=15% Similarity=0.446 Sum_probs=16.8
Q ss_pred CccCCHHHHHHHHHHHHHhC
Q 044959 79 RTKITEEQKSKMRRFADKLG 98 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~G 98 (159)
|+..++|+++++++|++.+|
T Consensus 120 ~~~~~~e~~e~F~~~~~~~G 139 (158)
T d1gt1a_ 120 KLNVEDEDLEKFWKLTEDKG 139 (158)
T ss_dssp ECCCCHHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcC
Confidence 46789999999999888876
No 125
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=28.91 E-value=9.3 Score=22.60 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 104 HDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 104 ~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
.+...+.++|.++||++.+|-.+|.|+
T Consensus 17 ~~~~s~~~Ia~~agvs~~tiy~~F~~K 43 (62)
T d2vkva1 17 IEGLTTRKLAQKLGVEQPTLYWHVKNK 43 (62)
T ss_dssp HHHCCHHHHHHHHTSCHHHHHHHSCCH
T ss_pred cccCCHHHHHHHhCCCHHHHHHHCCCH
Confidence 445578999999999999999999885
No 126
>d1hh1a_ c.52.1.18 (A:) Archaeal Holliday junction resolvase Hjc {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.83 E-value=16 Score=26.16 Aligned_cols=22 Identities=27% Similarity=0.371 Sum_probs=19.0
Q ss_pred CCCccCCHHHHHHHHHHHHHhC
Q 044959 77 TKRTKITEEQKSKMRRFADKLG 98 (159)
Q Consensus 77 R~RTkFT~eQkekLe~ffek~G 98 (159)
...-.++.||.++|..|+++-|
T Consensus 55 ~~~iyi~~eqve~L~~f~~~fG 76 (132)
T d1hh1a_ 55 EGKIYVRREQAEGIIEFARKSG 76 (132)
T ss_dssp TSCEEECHHHHHHHHHHHHHHT
T ss_pred cccEEECHHHHHHHHHHHHHcC
Confidence 3466799999999999999976
No 127
>d1wm3a_ d.15.1.1 (A:) SUMO-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.81 E-value=13 Score=22.94 Aligned_cols=30 Identities=7% Similarity=0.316 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCCccchhhhhccccCCCC
Q 044959 106 EEEVGKFCGEVGITRKMFKVWLNNNRRRPV 135 (159)
Q Consensus 106 ~~~r~efc~eiGl~r~VvKVWFqNrR~k~k 135 (159)
....+.+|...|++...++-||.++|-..-
T Consensus 25 ~kl~~~y~~~~~~~~~~~~f~fdG~~i~~~ 54 (72)
T d1wm3a_ 25 SKLMKAYCERQGLSMRQIRFRFDGQPINET 54 (72)
T ss_dssp HHHHHHHHHHHTCCTTTCEEEETTEECCTT
T ss_pred HHHHHHHHHHhCCCccceEEEECCEEcCCC
Confidence 456677889999999999999999987543
No 128
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.76 E-value=25 Score=20.21 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=23.3
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHh
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEV 116 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~ei 116 (159)
|++||+|+=+.|.+..++.| ..+ -..+|..|
T Consensus 1 k~~WT~eED~~L~~~v~~~g----~~~---W~~Ia~~~ 31 (50)
T d1guua_ 1 KTRWTREEDEKLKKLVEQNG----TDD---WKVIANYL 31 (50)
T ss_dssp CCCCCHHHHHHHHHHHHHHC----SSC---HHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHHHHC----CCC---HHHHHHHH
Confidence 67899999999999998875 122 55556666
No 129
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.36 E-value=26 Score=20.34 Aligned_cols=21 Identities=29% Similarity=0.295 Sum_probs=18.5
Q ss_pred CCccCCHHHHHHHHHHHHHhC
Q 044959 78 KRTKITEEQKSKMRRFADKLG 98 (159)
Q Consensus 78 ~RTkFT~eQkekLe~ffek~G 98 (159)
+|..||+|.-+.|.+..++.|
T Consensus 1 kr~~WT~eED~~L~~~v~~~G 21 (52)
T d1w0ta_ 1 KRQAWLWEEDKNLRSGVRKYG 21 (52)
T ss_dssp CCCCCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHC
Confidence 477899999999999998875
No 130
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=27.26 E-value=10 Score=23.02 Aligned_cols=27 Identities=11% Similarity=0.287 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 104 HDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 104 ~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
.+...++++|..+||++..|-..|.|+
T Consensus 23 ~~~~t~~~Ia~~agvs~~~~Y~~F~~K 49 (75)
T d2hyja1 23 LDGITIGRLAEELEMSKSGVHKHFGTK 49 (75)
T ss_dssp GGGCCHHHHHHHHTCCHHHHHTTCSSH
T ss_pred cccCcHHHHHHHHCcCHHHHHHHCcCH
Confidence 556688999999999999999999875
No 131
>d2cpra1 a.60.8.4 (A:483-595) Exosome component 10, EXOSC10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.26 E-value=40 Score=22.07 Aligned_cols=36 Identities=6% Similarity=0.033 Sum_probs=26.5
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccch
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMF 123 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~Vv 123 (159)
+|....++++|+..|+++++ -|+++|.+.++++..|
T Consensus 14 ~k~~~~l~~~qlavl~~L~~------------wRe~~Ar~~d~p~~~V 49 (113)
T d2cpra1 14 RKQKKHLNTQQLTAFQLLFA------------WRDKTARREDESYGYV 49 (113)
T ss_dssp TSSSSCCCHHHHHHHHHHHH------------HHHHHHHHTTCCHHHH
T ss_pred HhcccCCCHHHHHHHHHHHH------------HHHHHHHHhCCCccee
Confidence 34455799999999988773 4777888887776544
No 132
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=27.04 E-value=7.9 Score=23.23 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+...+.+.+. ..+...++++|++.||++..|---|.|+
T Consensus 8 ~aa~~l~~~~-----G~~~~ti~~Ia~~agvs~~~~y~~F~~K 45 (72)
T d1vi0a1 8 DAAVEVIAEN-----GYHQSQVSKIAKQAGVADGTIYLYFKNK 45 (72)
T ss_dssp HHHHHHHHHH-----CGGGCCHHHHHHHHTSCHHHHHHHCSSH
T ss_pred HHHHHHHHHh-----CcccccHHHHHHHHCcCHHHHHHHCcCH
Confidence 3344445554 3566789999999999999998888774
No 133
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.77 E-value=26 Score=20.11 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=31.6
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHh-CCCccchhhhhcc
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEV-GITRKMFKVWLNN 129 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~ei-Gl~r~VvKVWFqN 129 (159)
|+.||+|+-+.|.+..++.| + .-..+|+.+ |=+..++|.-+++
T Consensus 1 K~~WT~eED~~L~~~v~~~G-----~---~W~~Ia~~~~gRt~~~~knr~~~ 44 (47)
T d1gv2a2 1 KTSWTEEEDRIIYQAHKRLG-----N---RWAEIAKLLPGRTDNAIKNHWNS 44 (47)
T ss_dssp CCCCCHHHHHHHHHHHHHHS-----S---CHHHHHTTCTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHh-----h---HHHHHHhHcCCCCHHHHHHHHHH
Confidence 57899999999999999876 2 245666666 6666677665544
No 134
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=26.73 E-value=15 Score=22.54 Aligned_cols=32 Identities=22% Similarity=0.368 Sum_probs=24.0
Q ss_pred HHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhc
Q 044959 91 RRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLN 128 (159)
Q Consensus 91 e~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFq 128 (159)
..+..++| ..|+ .+++|.+|||+..-|.-|+.
T Consensus 17 ~~L~~~lG---R~Pt---~~EiA~~lg~s~~e~~~~l~ 48 (77)
T d1rp3a1 17 EKLKEKLG---REPT---DEEVAKELGISTEELFKTLD 48 (77)
T ss_dssp HHHHHHHS---SCCC---HHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHC---cCCC---HHHHHHHHCcCHHHHHHHHH
Confidence 34666666 4565 45678999999999999975
No 135
>d2np3a1 a.4.1.9 (A:35-99) Putative transcriptional regulator SCO0857 {Streptomyces coelicolor [TaxId: 1902]}
Probab=26.61 E-value=8.8 Score=23.06 Aligned_cols=29 Identities=7% Similarity=0.305 Sum_probs=3.1
Q ss_pred CCCHHHHHHHHHHhCCCccchhhhhcccc
Q 044959 103 RHDEEEVGKFCGEVGITRKMFKVWLNNNR 131 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~VvKVWFqNrR 131 (159)
-.+...++++|.+.||++..|--.|.|+.
T Consensus 13 G~~~~s~~~IA~~agvs~~~ly~~F~sK~ 41 (65)
T d2np3a1 13 GFDATSLRRIAETAGVDQSLVHHFYGTKE 41 (65)
T ss_dssp ------------------------CCC-C
T ss_pred CcccCCHHHHHHHHCcCHHHHHHHCCCHH
Confidence 35677899999999999999999998864
No 136
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.50 E-value=10 Score=22.98 Aligned_cols=22 Identities=9% Similarity=0.244 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCccchhhhhcc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNN 129 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqN 129 (159)
..++||+++||++.+|...++.
T Consensus 21 s~~eLa~~l~vS~~ti~r~i~~ 42 (63)
T d1biaa1 21 SGEQLGETLGMSRAAINKHIQT 42 (63)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHHH
Confidence 4578999999999999877764
No 137
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=26.01 E-value=44 Score=22.84 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCC--------CCCCHHHHHHHHHHhCCCccc
Q 044959 88 SKMRRFADKLGWKP--------QRHDEEEVGKFCGEVGITRKM 122 (159)
Q Consensus 88 ekLe~ffek~GW~i--------q~~d~~~r~efc~eiGl~r~V 122 (159)
+.+++..++.||.+ +..+...++.+++++||++..
T Consensus 52 ~~i~~~L~~~gl~~~dId~~i~Hqa~~~i~~~v~~~lgl~~ek 94 (148)
T d1u6ea2 52 DVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDA 94 (148)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHcCCCcccccEEEeccccHHHHHHHHHhcCCCchh
Confidence 45667888999875 556789999999999998653
No 138
>d1dcpa_ d.74.1.1 (A:) Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.72 E-value=18 Score=23.67 Aligned_cols=22 Identities=14% Similarity=0.501 Sum_probs=18.3
Q ss_pred cCCHHHHHHHHHHHHHhCCCCC
Q 044959 81 KITEEQKSKMRRFADKLGWKPQ 102 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~iq 102 (159)
++|.||++++..-....||++.
T Consensus 2 ~Ls~ee~~~~l~~L~~~GW~~~ 23 (99)
T d1dcpa_ 2 RLSAEERDQLLPNLRAVGWNEL 23 (99)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEC
T ss_pred CCCHHHHHHHHHhCCCCCCEEE
Confidence 6899999998887767799874
No 139
>d2cpga_ a.43.1.3 (A:) Transcriptional repressor CopG {Streptococcus agalactiae [TaxId: 1311]}
Probab=25.39 E-value=9.7 Score=22.62 Aligned_cols=24 Identities=17% Similarity=0.356 Sum_probs=20.2
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhC
Q 044959 75 AKTKRTKITEEQKSKMRRFADKLG 98 (159)
Q Consensus 75 kKR~RTkFT~eQkekLe~ffek~G 98 (159)
|||.-..+|.+|++.|+..|...|
T Consensus 2 kkr~tislse~~~~~lek~a~e~g 25 (43)
T d2cpga_ 2 KKRLTITLSESVLENLEKMAREMG 25 (43)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHHT
T ss_pred CceEEEEecHHHHHHHHHHHHHcC
Confidence 567777899999999999998865
No 140
>d2o38a1 a.35.1.13 (A:28-116) Hypothetical protein RPA3824 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=24.65 E-value=25 Score=22.19 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=21.6
Q ss_pred HHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 89 KMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 89 kLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+|.+.-+..||. .+++|+.+||+..+|.-|..++
T Consensus 15 ~i~~~r~~~glt--------q~~lA~~~gis~~~is~ie~G~ 48 (89)
T d2o38a1 15 ALNAVIDRARLS--------QAAAAARLGINQPKVSALRNYK 48 (89)
T ss_dssp HHHHHHHHTTCC--------HHHHHHHHTCCHHHHHHHHTTC
T ss_pred HHHHHHHHcCCC--------HHHHHHHHHhhHhHHHHHHcCC
Confidence 444455555553 4567777777777777777654
No 141
>d1x93a1 a.43.1.3 (A:31-73) Uncharacterized protein HP0222 {Helicobacter pylori [TaxId: 210]}
Probab=24.58 E-value=19 Score=21.11 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=13.6
Q ss_pred cCCHHHHHHHHHHHHH
Q 044959 81 KITEEQKSKMRRFADK 96 (159)
Q Consensus 81 kFT~eQkekLe~ffek 96 (159)
-|+.||-++|+..+..
T Consensus 7 yfsdeqyqklekmane 22 (43)
T d1x93a1 7 YFSDEQYQKLEKMANE 22 (43)
T ss_dssp EECHHHHHHHHHHHHH
T ss_pred EecHHHHHHHHHHhhh
Confidence 4899999999998754
No 142
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=24.50 E-value=15 Score=22.16 Aligned_cols=35 Identities=11% Similarity=0.093 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
..|.+.-+..||. .+++|..+||++.+|.-|..++
T Consensus 9 ~~i~~~r~~~glt--------q~elA~~~gv~~~~is~ie~g~ 43 (69)
T d2a6ca1 9 IVLQEHLRNSGLT--------QFKAAELLGVTQPRVSDLMRGK 43 (69)
T ss_dssp HHHHHHHHTTTCC--------HHHHHHHHTSCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCC--------HHHHHHHHHcCHhHHHHHHccc
Confidence 4555566666553 5789999999999999999865
No 143
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.49 E-value=13 Score=23.88 Aligned_cols=18 Identities=0% Similarity=0.034 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCccchhh
Q 044959 108 EVGKFCGEVGITRKMFKV 125 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKV 125 (159)
=|..||+++||++++|+.
T Consensus 19 GRr~La~~L~l~Er~vRt 36 (69)
T d2p8ta1 19 GRKQISERLELGEGSVRT 36 (69)
T ss_dssp CHHHHHHHHTCCHHHHHH
T ss_pred cHHHHHHHcCCcHHHHHH
Confidence 478899999999999974
No 144
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=24.01 E-value=32 Score=23.41 Aligned_cols=23 Identities=22% Similarity=0.384 Sum_probs=20.2
Q ss_pred cCCHHHHHHHHH-HHHHhCCCCCC
Q 044959 81 KITEEQKSKMRR-FADKLGWKPQR 103 (159)
Q Consensus 81 kFT~eQkekLe~-ffek~GW~iq~ 103 (159)
.||.+|+..||. ....++|.+.+
T Consensus 118 ~yt~~ei~~mE~~IL~~L~w~~~~ 141 (141)
T d1f5qb1 118 ATTADKLLTLEVKSLDTLSWVADR 141 (141)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHCCccCCC
Confidence 599999999999 88999998763
No 145
>d2ezia_ a.4.1.2 (A:) Transposase {Bacteriophage mu [TaxId: 10677]}
Probab=23.96 E-value=72 Score=19.58 Aligned_cols=37 Identities=11% Similarity=0.025 Sum_probs=28.2
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCH----HHHHHHHHHhCCC
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDE----EEVGKFCGEVGIT 119 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~----~~r~efc~eiGl~ 119 (159)
+..|+++-.+.++.++... +.|+. .++...|.+-|+.
T Consensus 5 k~~~~~~~we~i~~~YL~~----~~ps~~~~y~~i~~~c~~~gl~ 45 (75)
T d2ezia_ 5 KSEFDEDAWQFLIADYLRP----EKPAFRKCYERLELAAREHGWS 45 (75)
T ss_dssp TCCSCHHHHHHHHHHHTST----TCCCHHHHHHHHHHHHHHHTCC
T ss_pred cccCCHHHHHHHHHHHhCc----cCCCHHHHHHHHHHHHHHcCCC
Confidence 5678888888888887665 67774 5677788888874
No 146
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.84 E-value=71 Score=20.28 Aligned_cols=43 Identities=14% Similarity=0.212 Sum_probs=31.8
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHhCCCccc
Q 044959 80 TKITEEQKSKMRRFADKLGWKPQ-RHDEEEVGKFCGEVGITRKM 122 (159)
Q Consensus 80 TkFT~eQkekLe~ffek~GW~iq-~~d~~~r~efc~eiGl~r~V 122 (159)
+-+|++|+..|++.|...-+--. +.+..+...+...+|.....
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~ 45 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSE 45 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCH
Confidence 35899999999998888743322 35678888888888876653
No 147
>d1neea2 g.59.1.1 (A:99-135) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.83 E-value=10 Score=21.80 Aligned_cols=16 Identities=31% Similarity=0.808 Sum_probs=12.3
Q ss_pred CCcccccccccccccc
Q 044959 31 GTKEAFHCAACGCHRS 46 (159)
Q Consensus 31 ~~~~~l~CaaCgcHRn 46 (159)
+-..-|+|.|||=.|.
T Consensus 18 ~R~~~l~C~aCGa~r~ 33 (37)
T d1neea2 18 GRISLLKCEACGAKAP 33 (37)
T ss_dssp TTTTEEECSTTSCCCC
T ss_pred CCEEEEEeccCCCCcc
Confidence 3455799999998775
No 148
>d1aiha_ d.163.1.1 (A:) Integrase {Bacteriophage HP1 [TaxId: 10690]}
Probab=23.63 E-value=50 Score=21.90 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=27.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCc
Q 044959 81 KITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITR 120 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r 120 (159)
-||.||+.+|.+.+... ..++...+-.|+-..|+-.
T Consensus 6 ~Lt~eEi~~l~~~~~~~----~~~~~~~~i~l~~~tG~R~ 41 (170)
T d1aiha_ 6 FLYERDIYRLLAECDNS----RNPDLGLIVRICLATGARW 41 (170)
T ss_dssp CCCHHHHHHHHHHHTTS----SSTTHHHHHHHHHHHCCCH
T ss_pred CCCHHHHHHHHHHhhhc----CChhHHHHHHHHHHHCCch
Confidence 47999999999988653 4567777777777777654
No 149
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=23.59 E-value=16 Score=22.07 Aligned_cols=27 Identities=11% Similarity=0.347 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 104 HDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 104 ~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
.+...+.++|+++||++..|---|.++
T Consensus 21 ~~~~ti~~Ia~~agvs~~~iY~~F~~k 47 (75)
T d2id6a1 21 YDRATTDEIAEKAGVAKGLIFHYFKNK 47 (75)
T ss_dssp HHHCCHHHHHHHHTCCTHHHHHHHSSH
T ss_pred ccccCHHHHHHHhCCCHHHHHHHCCCH
Confidence 455678999999999999998888764
No 150
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=23.38 E-value=58 Score=21.31 Aligned_cols=30 Identities=33% Similarity=0.532 Sum_probs=22.5
Q ss_pred CCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHH
Q 044959 76 KTKRTKITEEQKSKMRRFADKLGWKPQRHDEEE 108 (159)
Q Consensus 76 KR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~ 108 (159)
+..|+.+|.+|+..|...+..+ .++++..+
T Consensus 6 ~~~R~aIs~~qK~ALR~~~~~~---~~~~sqk~ 35 (78)
T d1iufa1 6 KIKRRAITEHEKRALRHYFFQL---QNRSGQQD 35 (78)
T ss_dssp CCSSSCCCSHHHHHHHHHHHSS---SSCCCHHH
T ss_pred ccccccCCHHHHHHHHHHHHhc---CCCccHHH
Confidence 6789999999999999986443 14566443
No 151
>d1s7ja_ d.21.1.2 (A:) Hypothetical protein EF0119 {Enterococcus faecalis [TaxId: 1351]}
Probab=22.71 E-value=23 Score=25.79 Aligned_cols=21 Identities=14% Similarity=0.142 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHhCCCccch
Q 044959 103 RHDEEEVGKFCGEVGITRKMF 123 (159)
Q Consensus 103 ~~d~~~r~efc~eiGl~r~Vv 123 (159)
.+++++.|.+|+++|+++.+|
T Consensus 29 ~l~~~~mq~IA~e~n~sET~F 49 (260)
T d1s7ja_ 29 WLPEAVMQNIAIENNLSETAF 49 (260)
T ss_dssp CCCHHHHHHHHHHHCCSCEEE
T ss_pred CCCHHHHHHHHHHhCCCceEE
Confidence 578999999999999999999
No 152
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=22.70 E-value=34 Score=22.83 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=20.1
Q ss_pred ccCCHHHHHHHHH-HHHHhCCCCC
Q 044959 80 TKITEEQKSKMRR-FADKLGWKPQ 102 (159)
Q Consensus 80 TkFT~eQkekLe~-ffek~GW~iq 102 (159)
-.||.+|+.+||. .-..++|.++
T Consensus 104 ~~~t~~ei~~mE~~IL~~L~~dl~ 127 (127)
T d1bu2a1 104 DCFTNLELINQEKDILEALKWDTE 127 (127)
T ss_dssp TSSCHHHHHHHHHHHHHHTTTCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCC
Confidence 4699999999999 8888999875
No 153
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=22.65 E-value=11 Score=22.70 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCHHHH-HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 82 ITEEQK-SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 82 FT~eQk-ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+|.+++ +.-.+.+.+.| .+...+.++|+++||++..|-.-|.|+
T Consensus 3 ~t~e~Il~aa~~l~~~~G-----~~~~t~~~Ia~~agvs~~slY~yF~~k 47 (72)
T d1zk8a1 3 LTLQKIVETAAEIADANG-----VQEVTLASLAQTLGVRSPSLYNHVKGL 47 (72)
T ss_dssp CCHHHHHHHHHHHHHHHC-----GGGCCHHHHHHHHTSCHHHHTTTCSSH
T ss_pred ccHHHHHHHHHHHHHHhC-----CCcccHHHHHHHhCCCHHHHHHHCcCH
Confidence 344443 33344555543 566789999999999999998888774
No 154
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.06 E-value=39 Score=20.30 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=33.8
Q ss_pred CCCCCCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHh-CCCccchhhhhcccc
Q 044959 71 KNYKAKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEV-GITRKMFKVWLNNNR 131 (159)
Q Consensus 71 ~~~~kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~ei-Gl~r~VvKVWFqNrR 131 (159)
...+.++..+.+|+|+.+.|.+.....| .+ -..+|..| |=+..+++.-|.+.+
T Consensus 9 ~~~~~~~~~~~WT~eE~~~f~~~~~~~G-----~~---w~~Ia~~~~~rt~~q~~~~yy~~k 62 (68)
T d1xc5a1 9 KVYKDRQVMNMWSEQEKETFREKFMQHP-----KN---FGLIASFLERKTVAECVLYYYLTK 62 (68)
T ss_dssp TTTTSTTTTTCCCTTTHHHHHHHHHHTT-----SC---SSSHHHHTTTSCHHHHHHHHHHHT
T ss_pred HHHccccCCCCCCHHHHHHHHHHHHHHC-----Cc---HHHHHHHcCCCCHHHHHHHHHHHH
Confidence 3345677778899999999999888865 12 22345555 555555554444433
No 155
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=21.90 E-value=12 Score=22.32 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 88 SKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 88 ekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
+...+.+...| .+...+.++|..+||++..|---|-|+
T Consensus 13 ~aa~~l~~~~G-----~~~~t~~~Ia~~agvs~~~iY~~F~~k 50 (68)
T d2id3a1 13 LAAGDALAADG-----FDALDLGEIARRAGVGKTTVYRRWGTP 50 (68)
T ss_dssp HHHHHHHHHHC-----GGGCCHHHHHHHHTCCHHHHHHHHCSH
T ss_pred HHHHHHHHHhC-----cccCCHHHHHHHHCcCHHHHHHHCcCH
Confidence 34445555543 445579999999999999998888764
No 156
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.83 E-value=82 Score=21.50 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=27.2
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCC
Q 044959 75 AKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGIT 119 (159)
Q Consensus 75 kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~ 119 (159)
+.+.+...+++.+++|.+||.. ..++|.+.||.+
T Consensus 221 ~~~~~~~~~~~~~~~L~~~f~~-----------~n~~L~~llg~~ 254 (258)
T d1vkja_ 221 KGRAHPQVDPKLLDKLHEYFHE-----------PNKKFFKLVGRT 254 (258)
T ss_dssp SSCCCCCCCHHHHHHHHHHHHH-----------HHHHHHHHHTCC
T ss_pred ccccCCCCCHHHHHHHHHHHHH-----------HHHHHHHHhCCC
Confidence 3445567899999999999954 678899999975
No 157
>d1nd9a_ a.6.1.6 (A:) N-terminal subdomain of bacterial translation initiation factor IF2 {Escherichia coli [TaxId: 562]}
Probab=21.81 E-value=9.3 Score=23.12 Aligned_cols=23 Identities=4% Similarity=0.056 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCccchhhhhccc
Q 044959 108 EVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 108 ~r~efc~eiGl~r~VvKVWFqNr 130 (159)
.|++||.+||++...+--+|..-
T Consensus 4 TVk~lA~~v~~~vd~Ll~Ql~~A 26 (49)
T d1nd9a_ 4 TIKTLAAERQTSVERLVQQFADA 26 (49)
T ss_dssp CTTHHHHHHSSSHHHHHHHHHHH
T ss_pred cHHHHHHHHCcCHHHHHHHHHHc
Confidence 46788888888888888888653
No 158
>d1yt3a1 a.60.8.3 (A:194-294) Ribonuclease D {Escherichia coli [TaxId: 562]}
Probab=20.79 E-value=70 Score=20.06 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=23.3
Q ss_pred CccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCCccch
Q 044959 79 RTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGITRKMF 123 (159)
Q Consensus 79 RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~r~Vv 123 (159)
-.+++..|+..|+..++ -|+++|.+.++++..|
T Consensus 13 ~~~L~~~~l~~l~~L~~------------WRe~~A~~~d~p~~~V 45 (101)
T d1yt3a1 13 AWQLRTRQLACLQLLAD------------WRLRKARERDLAVNFV 45 (101)
T ss_dssp GGGSCHHHHHHHHHHHH------------HHHHHHHHHTCCGGGT
T ss_pred cccCCHHHHHHHHHHHH------------HHHHHHHHhCCCccee
Confidence 35688999998888763 4667777777766543
No 159
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}
Probab=20.77 E-value=71 Score=21.45 Aligned_cols=37 Identities=3% Similarity=0.010 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCC--------CCCCHHHHHHHHHHhCCCccch
Q 044959 87 KSKMRRFADKLGWKP--------QRHDEEEVGKFCGEVGITRKMF 123 (159)
Q Consensus 87 kekLe~ffek~GW~i--------q~~d~~~r~efc~eiGl~r~Vv 123 (159)
-+.++++.++.||.+ +..+...++.+++.+|+++..+
T Consensus 47 ~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~ 91 (143)
T d1hnja2 47 AHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNV 91 (143)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTTCCGGGB
T ss_pred hHHHHHHHHHhhhcccccceEEeccCchHHHHHHHHhCccchhhh
Confidence 345667888899875 4466899999999999998744
No 160
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=20.58 E-value=20 Score=22.73 Aligned_cols=18 Identities=11% Similarity=0.351 Sum_probs=13.9
Q ss_pred HHHHHHHHHhCCCccchh
Q 044959 107 EEVGKFCGEVGITRKMFK 124 (159)
Q Consensus 107 ~~r~efc~eiGl~r~VvK 124 (159)
.+++.||+.|||+..++.
T Consensus 7 ~~I~~~~~~L~L~~~i~~ 24 (98)
T d1aisb1 7 SELDRITAQLKLPRHVEE 24 (98)
T ss_dssp HHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHcCcCHHHHH
Confidence 467888888888887764
No 161
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=20.48 E-value=76 Score=20.30 Aligned_cols=41 Identities=24% Similarity=0.310 Sum_probs=27.5
Q ss_pred cCCHHHHHHHHHHHHHhCC--CCCCCCHHHHHHHHHHhCCCcc
Q 044959 81 KITEEQKSKMRRFADKLGW--KPQRHDEEEVGKFCGEVGITRK 121 (159)
Q Consensus 81 kFT~eQkekLe~ffek~GW--~iq~~d~~~r~efc~eiGl~r~ 121 (159)
.+|++|++.+++.|...-= +-.+.+..+...+-+.+|++..
T Consensus 7 ~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~ 49 (156)
T d1dtla_ 7 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT 49 (156)
T ss_dssp GSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCC
T ss_pred HCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCC
Confidence 5699999999986653200 0015677888888888887654
No 162
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=20.45 E-value=16 Score=21.91 Aligned_cols=27 Identities=7% Similarity=0.279 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHhCCCccchhhhhccc
Q 044959 104 HDEEEVGKFCGEVGITRKMFKVWLNNN 130 (159)
Q Consensus 104 ~d~~~r~efc~eiGl~r~VvKVWFqNr 130 (159)
.+...++++|++.||++..|--.|.|+
T Consensus 20 ~~~~ti~~Ia~~agvs~~~~Y~~F~~K 46 (68)
T d2d6ya1 20 IAGARIDRIAAEARANKQLIYAYYGNK 46 (68)
T ss_dssp TTSCCHHHHHHHHTCCHHHHHHHHSSH
T ss_pred ccccCHHHHHHHHCcchhHHHHHCcCH
Confidence 556688999999999999999999875
No 163
>d1t8ta_ c.37.1.5 (A:) Heparan sulfate glucosamine 3-O-sulfotransferase 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.41 E-value=87 Score=21.86 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=26.9
Q ss_pred CCCCCccCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHhCCC
Q 044959 75 AKTKRTKITEEQKSKMRRFADKLGWKPQRHDEEEVGKFCGEVGIT 119 (159)
Q Consensus 75 kKR~RTkFT~eQkekLe~ffek~GW~iq~~d~~~r~efc~eiGl~ 119 (159)
+.+....+.++.+++|.+||+. ..++|++-||.+
T Consensus 233 ~~~~~~~~~~~~~~~L~~~f~~-----------~~~~L~~llg~~ 266 (271)
T d1t8ta_ 233 KGRTHPEIDREVVRRLREFYRP-----------FNLKFYQMTGHD 266 (271)
T ss_dssp SSCCCCCCCHHHHHHHHHHHHH-----------HHHHHHHHHTCC
T ss_pred cccCCCCCCHHHHHHHHHHhHH-----------HHHHHHHHhCCC
Confidence 4455567899999999999955 678888888865
No 164
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=20.03 E-value=78 Score=19.15 Aligned_cols=41 Identities=12% Similarity=0.191 Sum_probs=27.2
Q ss_pred cCCHHHHHHHH---HHHHHhCCCCCCCCHHHHHHHHHHhCC-Cccchhhhh
Q 044959 81 KITEEQKSKMR---RFADKLGWKPQRHDEEEVGKFCGEVGI-TRKMFKVWL 127 (159)
Q Consensus 81 kFT~eQkekLe---~ffek~GW~iq~~d~~~r~efc~eiGl-~r~VvKVWF 127 (159)
.+|+-|++.|. +|..+.| ..|+ +.++|..+|+ +..+|..-+
T Consensus 2 ~LT~rQ~~vL~~I~~~~~~~G---~~Ps---~rei~~~~g~~S~stv~~~l 46 (71)
T d1jhfa1 2 ALTARQQEVFDLIRDHISQTG---MPPT---RAEIAQRLGFRSPNAAEEHL 46 (71)
T ss_dssp CCCHHHHHHHHHHHHHHHHHS---SCCC---HHHHHHHTTCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhC---CCCC---HHHHHHHcCCCCHHHHHHHH
Confidence 46788877765 4777776 3354 5667889999 566665443
Done!