BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044963
MDIRKLYHLGSRTIELDRCCDERRPVNSPPPSSPSEGQSKLRWIVLLMKFKKEKRKMFQV
PYDAYTYSQNFDQGFAWDEPDSFSRSFSVRFADPNRIFLMKSQG

High Scoring Gene Products

Symbol, full name Information P value
AT2G25735 protein from Arabidopsis thaliana 2.9e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044963
        (104 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006273 - symbol:AT2G25735 "AT2G25735" speci...   136  2.9e-09   1


>TAIR|locus:505006273 [details] [associations]
            symbol:AT2G25735 "AT2G25735" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0002237 "response to molecule of bacterial origin"
            evidence=RCA] [GO:0002679 "respiratory burst involved in defense
            response" evidence=RCA] [GO:0006979 "response to oxidative stress"
            evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
            [GO:0010200 "response to chitin" evidence=RCA] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=RCA]
            [GO:0035556 "intracellular signal transduction" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA]
            GO:GO:0005886 EMBL:CP002685 EMBL:AC006053 EMBL:AC005395
            IPI:IPI00546384 RefSeq:NP_565608.1 UniGene:At.38984 STRING:Q8RUI1
            EnsemblPlants:AT2G25735.1 GeneID:817115 KEGG:ath:AT2G25735
            TAIR:At2g25735 HOGENOM:HOG000090654 InParanoid:Q8RUI1 OMA:RETIVLG
            PhylomeDB:Q8RUI1 ProtClustDB:CLSN2917140 ArrayExpress:Q8RUI1
            Genevestigator:Q8RUI1 Uniprot:Q8RUI1
        Length = 119

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 32/62 (51%), Positives = 37/62 (59%)

Query:    42 RWIVLLMKFKKEKRKMFQ---VPYDAYTYSQNFDQGFAW---DEPDSFSRSFSVRFADPN 95
             +W VLLMK K    +      V Y+   YS NFDQG  W   DEP++ SRSFS RFADP 
Sbjct:    50 KWKVLLMKLKLLPSRASSTKVVAYEPCDYSLNFDQGPGWHDHDEPENLSRSFSCRFADPT 109

Query:    96 RI 97
             RI
Sbjct:   110 RI 111


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      104        96   0.00091  102 3  11 22  0.46    29
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  124 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.35u 0.10s 9.45t   Elapsed:  00:00:01
  Total cpu time:  9.35u 0.10s 9.45t   Elapsed:  00:00:01
  Start:  Fri May 10 19:18:01 2013   End:  Fri May 10 19:18:02 2013

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