BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044967
(329 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 68 FCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACV 127
F V+DGHG G V++ LP+ + + + KA E + D QE +
Sbjct: 53 FFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFL-GFDATLLQEKVI 109
Query: 128 KAFKVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQ 187
+ KV+ + + SG TAVV + G+DL +AN GDSR V V NG KA++
Sbjct: 110 EELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCV---VCRNG--KALE 164
Query: 188 LTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLK--- 244
++ D KP E +RI++ GRV L GL +SRA GD K
Sbjct: 165 MSFDHKPEDTVEYQRIEKAGGRVT------------LDGRVNGGLNLSRAIGDHGYKMNK 212
Query: 245 -----NHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATIVWEADNK 292
I A+PD+ + D+F++LA DG+ + ++S QV V E NK
Sbjct: 213 SLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINK 265
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 43/237 (18%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQ----KNALSNSNVKANGEVMMPSIDFYK 121
G F GV+DGHG GH V++ R+RL + + K+ LS N +V +
Sbjct: 65 GHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQV--------Q 114
Query: 122 WQEACVKAFKVMDKEV-------------KLQENLDCFCSGTTAVVVIRQGEDLVIANLG 168
W + F +D E+ K+ E + G+TAVV + +V++N G
Sbjct: 115 WDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCG 174
Query: 169 DSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHED 228
DSRAVL + A+ L+ D KP E RI+ G+V+ W
Sbjct: 175 DSRAVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARV 219
Query: 229 TPGLAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATI 285
LAMSR+ GD LK + +I P+V++ + D+ ++LA+DG+ DV+++ +V I
Sbjct: 220 FGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 275
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 37/234 (15%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKAN-GEVMMPSIDFYKWQE 124
G F GV+DGHG GH V++ R+RL + + + + K N GE +W +
Sbjct: 75 GHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQ-----VQWDK 127
Query: 125 ACVKAFKVMDKEV-------------KLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSR 171
F +D E+ K+ E + G+TAVV + +V++N GDSR
Sbjct: 128 VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR 187
Query: 172 AVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPG 231
AVL + A+ L+ D KP E RI+ G+V+ W
Sbjct: 188 AVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGV 232
Query: 232 LAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATI 285
LAMSR+ GD LK + +I P+V++ + D+ ++LA+DG+ DV+++ +V I
Sbjct: 233 LAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 285
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 37/234 (15%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKAN-GEVMMPSIDFYKWQE 124
G F GV+DGHG GH V++ R+RL + + + + K N GE +W +
Sbjct: 66 GHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQ-----VQWDK 118
Query: 125 ACVKAFKVMDKEV-------------KLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSR 171
F +D E+ K+ E + G+TAVV + +V++N GDSR
Sbjct: 119 VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR 178
Query: 172 AVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPG 231
AVL + A+ L+ D KP E RI+ G+V+ W
Sbjct: 179 AVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGV 223
Query: 232 LAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATI 285
LAMSR+ GD LK + +I P+V++ + D+ ++LA+DG+ DV+++ +V I
Sbjct: 224 LAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 276
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 37/234 (15%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKAN-GEVMMPSIDFYKWQE 124
G F GV+DGHG GH V++ R+RL + + + + K N GE +W +
Sbjct: 68 GHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQ-----VQWDK 120
Query: 125 ACVKAFKVMDKEV-------------KLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSR 171
F +D E+ K+ E + G+TAVV + +V++N GDSR
Sbjct: 121 VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR 180
Query: 172 AVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPG 231
AVL + A+ L+ D KP E RI+ G+V+ W
Sbjct: 181 AVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGV 225
Query: 232 LAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATI 285
LAMSR+ GD LK + +I P+V++ + D+ ++LA+DG+ DV+++ +V I
Sbjct: 226 LAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 278
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 37/234 (15%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKAN-GEVMMPSIDFYKWQE 124
G F GV+DGHG GH V++ R+RL + + + + K N GE +W +
Sbjct: 51 GHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQ-----VQWDK 103
Query: 125 ACVKAFKVMDKEV-------------KLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSR 171
F +D E+ K+ E + G+TAVV + +V++N GDSR
Sbjct: 104 VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR 163
Query: 172 AVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPG 231
AVL + A+ L+ D KP E RI+ G+V+ W
Sbjct: 164 AVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGV 208
Query: 232 LAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATI 285
LAMSR+ GD LK + +I P+V++ + D+ ++LA+DG+ DV+++ +V I
Sbjct: 209 LAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 261
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 37/234 (15%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKAN-GEVMMPSIDFYKWQE 124
G F GV+DGHG GH V++ R+RL + + + + K N GE +W +
Sbjct: 62 GHFFGVYDGHG--GHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQ-----VQWDK 114
Query: 125 ACVKAFKVMDKEV-------------KLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSR 171
F +D E+ K+ E + G+TAVV + +V++N GDSR
Sbjct: 115 VFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR 174
Query: 172 AVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPG 231
AVL + A+ L+ D KP E RI+ G+V+ W
Sbjct: 175 AVLFRGKE-----AMPLSVDHKPDREDEYARIENAGGKVIQ----------WQGARVFGV 219
Query: 232 LAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQVATI 285
LAMSR+ GD LK + +I P+V++ + D+ ++LA+DG+ DV+++ +V I
Sbjct: 220 LAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEI 272
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 37/272 (13%)
Query: 19 GQENVIFVEGNIVSHGVKKLCSLYSKQGSKGLNQDAGILCQGYGTEDGEFCGVFDGHGKH 78
G EN+ F G + + S+ G + N+D Q T++ + V+DGHG
Sbjct: 104 GGENLYFQAGKPIPKISLENVGCASQIGKRKENEDRFDFAQL--TDEVLYFAVYDGHG-- 159
Query: 79 GHVVSELVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACVKAFKVMDKEVK 138
G ++ + I+ + L + N E ++ A ++ K +
Sbjct: 160 GPAAADFCHTHMEKCIM---DLLPK---EKNLETLLTL--------AFLEIDKAFSSHAR 205
Query: 139 LQENLDCFCSGTTAVV-VIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDLKPSLP 197
L + SGTTA V ++R G +LV+A++GDSRA+L K ++LT D P
Sbjct: 206 LSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG-----KPMKLTIDHTPERK 260
Query: 198 SEAERIKQCRGRVL--ALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKNHGIIAIPDVS 255
E ERIK+C G V +L + PH+ LAM+R+ GD LK G+IA P+
Sbjct: 261 DEKERIKKCGGFVAWNSLGQ-PHVNGR---------LAMTRSIGDLDLKTSGVIAEPETK 310
Query: 256 YRRL-TSNDQFILLATDGVLDVLSSNQVATIV 286
+L ++D F++L TDG+ +++S ++ V
Sbjct: 311 RIKLHHADDSFLVLTTDGINFMVNSQEICDFV 342
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 19/160 (11%)
Query: 131 KVMDKEVKLQENLDCFCSGTTAVV-VIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLT 189
K +L + SGTTA V ++R G +LV+A++GDSRA+L K ++LT
Sbjct: 84 KAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG-----KPMKLT 138
Query: 190 TDLKPSLPSEAERIKQCRGRVL--ALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKNHG 247
D P E ERIK+C G V +L + PH+ LAM+R+ GD LK G
Sbjct: 139 IDHTPERKDEKERIKKCGGFVAWNSLGQ-PHVN---------GRLAMTRSIGDLDLKTSG 188
Query: 248 IIAIPDVSYRRL-TSNDQFILLATDGVLDVLSSNQVATIV 286
+IA P+ +L ++D F++L TDG+ +++S ++ V
Sbjct: 189 VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV 228
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 28/215 (13%)
Query: 68 FCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACV 127
F GV+DGHG G V+ R R+ L L+++ A + ++G+ + KW++A
Sbjct: 54 FFGVYDGHG--GSQVANYCRERM-HLALAEEIA-KEKPMLSDGDTWL-----EKWKKALF 104
Query: 128 KAFKVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQ 187
+F +D E+ E++ G+T+VV + + +AN GDSRAVL G+ A+
Sbjct: 105 NSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLC----RGK-TALP 156
Query: 188 LTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKNHG 247
L+ D KP EA RI+ G+V+ W LAMSR+ GD LK
Sbjct: 157 LSVDHKPDREDEAARIEAAGGKVIQ----------WNGARVFGVLAMSRSIGDRYLKP-S 205
Query: 248 IIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQV 282
II P+V+ + D ++LA+DGV DV++ +
Sbjct: 206 IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEA 240
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 118/309 (38%), Gaps = 96/309 (31%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLI----LSQKNALSNSNVKANGEVMMPSIDFYK 121
G GVFDGH G S+ V RL I L + L N +G ++P + ++K
Sbjct: 66 GMLLGVFDGHA--GCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHK 123
Query: 122 ---------------------WQE----------------ACVKAFKVMDKEVKLQEN-- 142
WQE A + AFK +D ++ L+
Sbjct: 124 HPNDYFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVG 183
Query: 143 ----------LDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDL 192
L SG TA V G DL +AN GDSRA+LG ++G AV L+ D
Sbjct: 184 DPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDH 243
Query: 193 KPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMS-RAFGD----------- 240
E ER+K L+ + + + + GL M RAFGD
Sbjct: 244 NAQNEREVERLK--------LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQK 295
Query: 241 -----------------FLLKNHG----IIAIPDVSYRRLTSNDQFILLATDGVLDVLSS 279
F+ N+ + A P+V+Y RL D+F++LATDG+ + +
Sbjct: 296 RVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHR 355
Query: 280 NQVATIVWE 288
V IV E
Sbjct: 356 QDVVRIVGE 364
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 68 FCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACV 127
F GV+DGHG G V+ R R+ L L+++ A + +G+ + KW++A
Sbjct: 57 FFGVYDGHG--GSQVANYCRERM-HLALAEEIAKEKPML-CDGDTWL-----EKWKKALF 107
Query: 128 KAFKVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQ 187
+F +D E+ E++ G+T+VV + + +AN GDSRAVL G+ A+
Sbjct: 108 NSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLC----RGK-TALP 159
Query: 188 LTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKNHG 247
L+ D KP EA RI+ G+V+ W LAMSR+ GD LK
Sbjct: 160 LSVDHKPDREDEAARIEAAGGKVIQ----------WNGARVFGVLAMSRSIGDRYLKP-S 208
Query: 248 IIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQV 282
II P+V+ + D ++LA+DGV DV++ +
Sbjct: 209 IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEA 243
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 68 FCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACV 127
F GV+DGHG G V+ R R+ L L+++ A + +G+ + KW++A
Sbjct: 69 FFGVYDGHG--GSQVANYCRERM-HLALAEEIA-KEKPMLCDGDTWL-----EKWKKALF 119
Query: 128 KAFKVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQ 187
+F +D E+ E++ G+T+VV + + +AN GDSRAVL G+ A+
Sbjct: 120 NSFLRVDSEI---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLC----RGK-TALP 171
Query: 188 LTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKNHG 247
L+ D KP EA RI+ G+V+ W LAMSR+ GD LK
Sbjct: 172 LSVDHKPDREDEAARIEAAGGKVIQ----------WNGARVFGVLAMSRSIGDRYLKP-S 220
Query: 248 IIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQV 282
II P+V+ + D ++LA+DGV DV++ +
Sbjct: 221 IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEA 255
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 118/266 (44%), Gaps = 20/266 (7%)
Query: 39 CSLYSKQGSKGLNQDAGILCQGY--GTEDGEFCGVFDGHGKHGHVVSELVRNRL-PSLIL 95
++++ G + +D LC G +D F GVFDG G SE V++ + P LI
Sbjct: 24 AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDG--TVGDFASENVKDLVVPQLIS 81
Query: 96 SQKNALSNSNVKANGEVMMPSIDFYKWQ---EACVKAFKVMDKE-VKLQENLDCFCSGTT 151
S A +V +D Q +A +K D E VK E L+ + +T
Sbjct: 82 SP--AWQEVTEXLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASST 139
Query: 152 AVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVL 211
+V + + + +LGDSR G + NG L LT D KP P E RI + G V
Sbjct: 140 SVTAVLAKGFVAVGHLGDSRIAXGVETPNG-LNCEFLTVDHKPDXPHEKLRIXRNGGSVE 198
Query: 212 AL---KEEPHIQRVWLPHEDTPG-----LAMSRAFGDFLLKNHGIIAIPDVSYRRLTSND 263
L +P I+ + G L SRAFG LK +G+ PDV R+T
Sbjct: 199 YLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQH 258
Query: 264 QFILLATDGVLDVLSSNQVATIVWEA 289
+ +LATDG+ DV S+ Q I +A
Sbjct: 259 RVXILATDGLWDVXSAAQAVEIAXQA 284
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 118/309 (38%), Gaps = 96/309 (31%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLI----LSQKNALSNSNVKANGEVMMPSIDFYK 121
G GVFDGH G S+ V RL I L + L N +G ++P + ++K
Sbjct: 66 GMLLGVFDGHA--GCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHK 123
Query: 122 ---------------------WQE----------------ACVKAFKVMDKEVKLQEN-- 142
WQE A + AFK +D ++ L+
Sbjct: 124 HPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVG 183
Query: 143 ----------LDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDL 192
L SG TA V G DL +AN GDSRA+LG ++G AV L+ D
Sbjct: 184 DPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDH 243
Query: 193 KPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMS-RAFGD----------- 240
E +R+K L+ + + + + GL M RAFGD
Sbjct: 244 NAQNERELQRLK--------LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQK 295
Query: 241 -----------------FLLKNHG----IIAIPDVSYRRLTSNDQFILLATDGVLDVLSS 279
F+ N+ + A P+V+Y RL D+F++LATDG+ + +
Sbjct: 296 RVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHR 355
Query: 280 NQVATIVWE 288
V IV E
Sbjct: 356 QDVVRIVGE 364
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 66 GEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEA 125
F GV+DGHG G V+ R R+ AL+ VK E KW++A
Sbjct: 59 AHFFGVYDGHG--GSQVANYCRERM-------HLALTEEIVKEKPEFCDGDTWQEKWKKA 109
Query: 126 CVKAFKVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKA 185
+F +D E++ + G+T+VV + + +AN GDSRAVL G+
Sbjct: 110 LFNSFMRVDSEIETVAHAP-ETVGSTSVVAVVFPTHIFVANCGDSRAVLC----RGK-TP 163
Query: 186 VQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKN 245
+ L+ D KP EA RI+ G+V+ W LAMSR+ GD LK
Sbjct: 164 LALSVDHKPDRDDEAARIEAAGGKVIR----------WNGARVFGVLAMSRSIGDRYLKP 213
Query: 246 HGIIAIPDVSYRRLTSNDQFILLATDGVLDVLSSNQV 282
+I P+V+ R D ++LA+DG+ DV+++ +V
Sbjct: 214 -SVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEV 249
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 115/258 (44%), Gaps = 37/258 (14%)
Query: 41 LYSKQGSKGLNQDAGILCQG--YGTEDGEFCGVFDGHGKHGHVVSELVRNRLPSLILSQK 98
L S QG + +DA G +G ED F V+DGH G V+ L I + +
Sbjct: 28 LSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRVANYCSTHLLEHITTNE 85
Query: 99 NALSNSNVKANGEVMMPSIDFYK--WQEACVKAFKVMDKEVKLQENLDCFCSGTTAVVVI 156
+ + +G + S++ K + +K + M L+ +D SG+TAV V+
Sbjct: 86 DFRA---AGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDR--SGSTAVGVM 140
Query: 157 RQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEE 216
+ + N GDSRAVL NG++ T D KP P E ERI+ G V+
Sbjct: 141 ISPKHIYFINCGDSRAVL---YRNGQV--CFSTQDHKPCNPREKERIQNAGGSVM----- 190
Query: 217 PHIQRVWLPHEDTPGLAMSRAFGDFLLK--------NHGIIAIPDVSYRRLTSNDQFILL 268
IQRV LA+SRA GD+ K + P+V D+FI+L
Sbjct: 191 --IQRV------NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIIL 242
Query: 269 ATDGVLDVLSSNQVATIV 286
A DG+ DV+S+ ++ V
Sbjct: 243 AXDGIWDVMSNEELCEYV 260
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 27 EGNIVSHGVKKLCSLYSKQGSKGLNQDAGILCQGY--GTEDGEFCGVFDGHGKHGHVVSE 84
+GN + +G L S QG + +DA G G E F V+DGH G V++
Sbjct: 18 QGNGLRYG------LSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAK 69
Query: 85 LVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACVKAFKVMDKEVKL--QEN 142
L I +N G PS++ K F +D+ +++ ++
Sbjct: 70 YCCEHLLDHI--------TNNQDFKGSAGAPSVENVK--NGIRTGFLEIDEHMRVMSEKK 119
Query: 143 LDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAER 202
SG+TAV V+ + N GDSR +L K T D KPS P E ER
Sbjct: 120 HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR-----NRKVHFFTQDHKPSNPLEKER 174
Query: 203 IKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKN-HG-------IIAIPDV 254
I+ G V+ IQRV LA+SRA GDF K HG + P+V
Sbjct: 175 IQNAGGSVM-------IQRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEV 221
Query: 255 -SYRRLTSNDQFILLATDGVLDVLSSNQVATIV 286
R +DQFI+LA DG+ DV+ + ++ V
Sbjct: 222 HDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 116/273 (42%), Gaps = 49/273 (17%)
Query: 27 EGNIVSHGVKKLCSLYSKQGSKGLNQDAGILCQGY--GTEDGEFCGVFDGHGKHGHVVSE 84
+GN + +G L S QG + +DA G G E F V+DGH G V++
Sbjct: 18 QGNGLRYG------LSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAK 69
Query: 85 LVRNRLPSLILSQKNALSNSNVKANGEVMMPSIDFYKWQEACVKAFKVMDKEVKL--QEN 142
L I +N G PS++ K F +D+ +++ ++
Sbjct: 70 YCCEHLLDHI--------TNNQDFKGSAGAPSVENVK--NGIRTGFLEIDEHMRVMSEKK 119
Query: 143 LDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAER 202
SG+TAV V+ + N GDSR +L K T D KPS P E ER
Sbjct: 120 HGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR-----NRKVHFFTQDHKPSNPLEKER 174
Query: 203 IKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKN-HG-------IIAIPDV 254
I+ G V+ IQRV LA+SRA GDF K HG + P+V
Sbjct: 175 IQNAGGSVM-------IQRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEV 221
Query: 255 -SYRRLTSNDQFILLATDGVLDVLSSNQVATIV 286
R +DQFI+LA DG+ DV+ + ++ V
Sbjct: 222 HDIERSEEDDQFIILACDGIWDVMGNEELCDFV 254
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 23/108 (21%)
Query: 156 IRQGEDLVIA-NLGDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALK 214
I G LV A N+GDSRA L + +G L +L+ D KP+ P+EA RI++ G V
Sbjct: 168 IPAGSFLVTAINIGDSRATL--IHSDGGL--TRLSKDHKPNHPTEASRIEKAGGSVETF- 222
Query: 215 EEPHIQRVWLPHEDTPGLAMSRAFGDFLLK--------NHGIIAIPDV 254
+ P + V LA+SRAFGD K +IA+PDV
Sbjct: 223 DVPRVDGV---------LALSRAFGDSDFKXNPNLPPEEQKVIAVPDV 261
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 24/148 (16%)
Query: 70 GVFDGHGKHGHVVSELVRNRLPS-LILSQKNA-LSNSNVK--------ANGEVMMPSIDF 119
GVF+G+ G+ V+ V RL + L+L Q NA + ++V+ + SID
Sbjct: 68 GVFNGY--DGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 120 YKWQEACVK--AFKVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAVLGTV 177
++A ++ K +++E+ G AVV + L +AN+G +RA+L
Sbjct: 126 ALAEKASLQLERLKTLEREI---------SGGAMAVVAVLLNNKLYVANVGTNRALLCKS 176
Query: 178 SDNGELKAVQLTTDLKPSLPSEAERIKQ 205
+ +G L+ QL D E R+ Q
Sbjct: 177 TVDG-LQVTQLNVDHTTENEDELFRLSQ 203
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 25/144 (17%)
Query: 115 PSIDFYKWQEACVKAF-KVMDKEVKLQENLDCFCSGTTAVVVIRQGEDLVIANLGDSRAV 173
P D +A V+A + +V+++ +L+ GTT ++ G L + ++GDSR
Sbjct: 85 PGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGM--GTTLTAILFAGNRLGLVHIGDSR-- 140
Query: 174 LGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPH-------IQRVWLPH 226
G + +GEL + +L E GR+ EE H I R H
Sbjct: 141 -GYLLRDGELTQITKDDTFVQTLVDE--------GRI--TPEEAHSHPQRSLIMRALTGH 189
Query: 227 EDTPGLAM--SRAFGDFLLKNHGI 248
E P L M +RA +LL + G+
Sbjct: 190 EVEPTLTMREARAGDRYLLCSDGL 213
>pdb|4GIJ|A Chain A, Crystal Structure Of Pseudouridine Monophosphate
Glycosidase Complexed With Sulfate
pdb|4GIJ|B Chain B, Crystal Structure Of Pseudouridine Monophosphate
Glycosidase Complexed With Sulfate
pdb|4GIJ|C Chain C, Crystal Structure Of Pseudouridine Monophosphate
Glycosidase Complexed With Sulfate
pdb|4GIK|A Chain A, Crystal Structure Of Pseudouridine Monophosphate
GlycosidaseLINEAR R5p Adduct
pdb|4GIK|B Chain B, Crystal Structure Of Pseudouridine Monophosphate
GlycosidaseLINEAR R5p Adduct
pdb|4GIK|C Chain C, Crystal Structure Of Pseudouridine Monophosphate
GlycosidaseLINEAR R5p Adduct
pdb|4GIL|A Chain A, Crystal Structure Of Pseudouridine Monophosphate
GlycosidaseLINEAR Pseudouridine 5'-Phosphate Adduct
pdb|4GIL|B Chain B, Crystal Structure Of Pseudouridine Monophosphate
GlycosidaseLINEAR Pseudouridine 5'-Phosphate Adduct
pdb|4GIL|C Chain C, Crystal Structure Of Pseudouridine Monophosphate
GlycosidaseLINEAR Pseudouridine 5'-Phosphate Adduct
Length = 335
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 9 SSEIHDQVDNGQENVIFVEGNIVSHGVK---------KLCSLYSKQGS--KGLNQDAGIL 57
S E+ D + N ++ V+ +E I+SHG+ ++ KQG+ + G++
Sbjct: 37 SPEVQDALKN-KKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVM 95
Query: 58 CQGYGTEDGEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKN 99
G E+ E G + GH V+++ R LP ++ + KN
Sbjct: 96 KVGLSKEEIELLG------REGHNVTKVSRRDLPFVVAAGKN 131
>pdb|4GIM|A Chain A, Crystal Structure Of Pseudouridine Monophosphate
Glycosidase Complexed With Pseudouridine 5'-Phosphate
pdb|4GIM|B Chain B, Crystal Structure Of Pseudouridine Monophosphate
Glycosidase Complexed With Pseudouridine 5'-Phosphate
pdb|4GIM|C Chain C, Crystal Structure Of Pseudouridine Monophosphate
Glycosidase Complexed With Pseudouridine 5'-Phosphate
Length = 335
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 9 SSEIHDQVDNGQENVIFVEGNIVSHGVK---------KLCSLYSKQGS--KGLNQDAGIL 57
S E+ D + N ++ V+ +E I+SHG+ ++ KQG+ + G++
Sbjct: 37 SPEVQDALKN-KKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVM 95
Query: 58 CQGYGTEDGEFCGVFDGHGKHGHVVSELVRNRLPSLILSQKN 99
G E+ E G + GH V+++ R LP ++ + KN
Sbjct: 96 KVGLSKEEIELLG------REGHNVTKVSRRDLPFVVAAGKN 131
>pdb|2W7Z|A Chain A, Structure Of The Pentapeptide Repeat Protein Efsqnr, A Dna
Gyrase Inhibitor. Free Amines Modified By Cyclic
Pentylation With Glutaraldehyde.
pdb|2W7Z|B Chain B, Structure Of The Pentapeptide Repeat Protein Efsqnr, A Dna
Gyrase Inhibitor. Free Amines Modified By Cyclic
Pentylation With Glutaraldehyde
Length = 214
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 186 VQLTTDLKPSLPSEAERIKQCRGRVLALKEEPHIQRVWLPHEDTPGLAMSRAFGDFLLKN 245
+ +T L P+LP + + C+ A+ E Q++ LP+++ L A D L
Sbjct: 4 MXITYPLPPNLPEQLPLLTNCQLEDEAILENHLYQQIDLPNQEVRNLVFRDAVFDHLSLA 63
Query: 246 HGIIAIPDVSYRRLTSND 263
+G A D S R + D
Sbjct: 64 NGQFASFDCSNVRFEACD 81
>pdb|2GAH|A Chain A, Heterotetrameric Sarcosine: Structure Of A Diflavin
Metaloenzyme At 1.85 A Resolution
Length = 965
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 173 VLGTVSDNGELKAVQLTTDLK-PSLPS-EAERIKQCRGRVLALKEEPHIQRVWLPHEDTP 230
V G+ N + A + T L PS P ERI R + + L H + + + D P
Sbjct: 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRP 264
Query: 231 GLAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFI-----LLATDGVLDVL 277
G+ ++ A + L +G+ A ++ T+ND L AT GV+ V+
Sbjct: 265 GIXLAGAVRSY-LNRYGVRAGARIAV--ATTNDSAYELVRELAATGGVVAVI 313
>pdb|2GAG|A Chain A, Heteroteterameric Sarcosine: Structure Of A Diflavin
Metaloenzyme At 1.85 A Resolution
Length = 965
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 173 VLGTVSDNGELKAVQLTTDLK-PSLPS-EAERIKQCRGRVLALKEEPHIQRVWLPHEDTP 230
V G+ N + A + T L PS P ERI R + + L H + + + D P
Sbjct: 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRP 264
Query: 231 GLAMSRAFGDFLLKNHGIIAIPDVSYRRLTSNDQFI-----LLATDGVLDVL 277
G+ ++ A + L +G+ A ++ T+ND L AT GV+ V+
Sbjct: 265 GIMLAGAVRSY-LNRYGVRAGARIAV--ATTNDSAYELVRELAATGGVVAVI 313
>pdb|3P12|A Chain A, Crystal Structure Of D-Ribose Pyranase Sa240
pdb|3P12|B Chain B, Crystal Structure Of D-Ribose Pyranase Sa240
pdb|3P12|C Chain C, Crystal Structure Of D-Ribose Pyranase Sa240
pdb|3P12|D Chain D, Crystal Structure Of D-Ribose Pyranase Sa240
pdb|3P13|A Chain A, Complex Structure Of D-Ribose Pyranase Sa240 With D-Ribose
pdb|3P13|B Chain B, Complex Structure Of D-Ribose Pyranase Sa240 With D-Ribose
pdb|3P13|C Chain C, Complex Structure Of D-Ribose Pyranase Sa240 With D-Ribose
pdb|3P13|D Chain D, Complex Structure Of D-Ribose Pyranase Sa240 With D-Ribose
Length = 144
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 163 VIANLGDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQCRGRVLALKEEPH 218
V NL VL TV + E++ + L ++K P++ ++IKQ + + PH
Sbjct: 46 VTKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPH 101
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 70 GVFDGHGKHGHVVSELVRNRLPS-LILSQKNA-LSNSNVK--------ANGEVMMPSIDF 119
GVF+G+ G+ V+ V RL + L+L Q NA + ++V+ + SID
Sbjct: 68 GVFNGY--DGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 120 YKWQEACVKA--------FKVMDKEVKLQENLDCF----CSGTTAVVVIRQGEDLVIANL 167
++A +++ ++ + K+ E L G AVV + L +AN+
Sbjct: 126 ALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANV 185
Query: 168 GDSRAVLGTVSDNGELKAVQLTTDLKPSLPSEAERIKQ 205
G +RA+L + +G L+ QL D E R+ Q
Sbjct: 186 GTNRALLCKSTVDG-LQVTQLNVDHTTENEDELFRLSQ 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,479,954
Number of Sequences: 62578
Number of extensions: 380560
Number of successful extensions: 960
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 875
Number of HSP's gapped (non-prelim): 40
length of query: 329
length of database: 14,973,337
effective HSP length: 99
effective length of query: 230
effective length of database: 8,778,115
effective search space: 2018966450
effective search space used: 2018966450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)