BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044971
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/156 (86%), Positives = 145/156 (92%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MATSTMALSSS F GKAV L+PS +E++ GR++MRKTA+K+ SSGSPWYG DRVKYL
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/156 (86%), Positives = 145/156 (92%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASK--SVSSGSPWYGLDRVKYL 57
MA STMALSS SF GKAV L+PS +E++ G+++MRKTASK +VSSGSPWYG DRVKYL
Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/155 (85%), Positives = 143/155 (92%), Gaps = 2/155 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYLG 58
MA ST ALSS F GKAV L+PS +E++ G+++MRKTASK+ VSSGSPWYG DRVKYLG
Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 132/155 (85%), Positives = 143/155 (92%), Gaps = 2/155 (1%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYLG 58
MA ST ALSS F GKAV L+PS +E++ G+++MRKTA+K+ VSSGSPWYG DRVKYLG
Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
+PG +D GL+ DPE FA+ + E+ + R AM G L+ G
Sbjct: 190 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKG 238
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 131/154 (85%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGP 59
MA +TMALSS SF G+AV L+PS E++ GR+SMRKT +K V+S SPWYG DRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/154 (85%), Positives = 140/154 (90%), Gaps = 1/154 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGP 59
MA +TMALSS SF G+AV L+PS +E+S GRI+MRK +KS S SPWYG DRVKYLGP
Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 144/156 (92%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMALSSS F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYG DRVKYL
Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba
GN=CAB1 PE=3 SV=1
Length = 266
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/154 (83%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGP 59
MA STMALSS +F GKAV L+P +E+ GR++MRKT + SGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 143/156 (91%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA STMALSSS F GKAV L+PS +E++ G+++MRKTASK+ VSS SPWYG +RVKYL
Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHA 156
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/156 (83%), Positives = 141/156 (90%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMALSSS F GK V L+PS +E++ G+ +MRKTA+K+ VSSGSPWYG DRVKYL
Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 140/156 (89%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASK--SVSSGSPWYGLDRVKYL 57
MA+STMALSS S GKAV L P+ +E+ GRI+MRKTA K +V S SPWYG DRVKYL
Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/156 (83%), Positives = 140/156 (89%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
M STMALSS SF G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYG DRVKYL
Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 130/156 (83%), Positives = 141/156 (90%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYG DRVKYL
Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 129/156 (82%), Positives = 142/156 (91%), Gaps = 4/156 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMA+SSS F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYG DRVKYL
Sbjct: 1 MAAATMAISSSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/156 (81%), Positives = 139/156 (89%), Gaps = 3/156 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMALSSS F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYG DRVKYL
Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 61 GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HA
Sbjct: 121 ARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/155 (82%), Positives = 140/155 (90%), Gaps = 2/155 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVS-SGSPWYGLDRVKYLG 58
MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HA
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA 155
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/155 (82%), Positives = 140/155 (90%), Gaps = 2/155 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVS-SGSPWYGLDRVKYLG 58
MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HA
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA 155
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/154 (84%), Positives = 136/154 (88%), Gaps = 2/154 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGP 59
MA STMALSS + GKAV +APS +EL GR+SMRKT VS SPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 120 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 153
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/156 (81%), Positives = 140/156 (89%), Gaps = 4/156 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMALSSS F GKAVN+ PS +E++ G+++MRKT +K+ VSSGSPWYG DRVKYL
Sbjct: 1 MAAATMALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL
Sbjct: 60 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELF 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HA
Sbjct: 120 ARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHA 155
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 139/155 (89%), Gaps = 2/155 (1%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKSVS-SGSPWYGLDRVKYLG 58
MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLG
Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60
Query: 59 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 118
PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61 PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120
Query: 119 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
RNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HA
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA 155
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/143 (84%), Positives = 131/143 (91%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTG 70
+ G+AV L+P+ E+ + +MRKTASKSVSSGSPWYG DRVKYLGPFSGEPPSYLTG
Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 61
Query: 71 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 130
EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 62 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 121
Query: 131 KAGAQIFSEGGLDYLGNPSLIHA 153
KAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 122 KAGSQIFSEGGLDYLGNPSLVHA 144
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 124/140 (88%), Positives = 129/140 (92%), Gaps = 3/140 (2%)
Query: 14 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFP 73
GKAV L PS E+ GR+SMRKT +K VSSGSPWYG DRVKYLGPFSGEPPSYLTGEFP
Sbjct: 16 GKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72
Query: 74 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 133
GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG
Sbjct: 73 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG 132
Query: 134 AQIFSEGGLDYLGNPSLIHA 153
+QIFSEGGLDYLGNPSLIHA
Sbjct: 133 SQIFSEGGLDYLGNPSLIHA 152
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/156 (81%), Positives = 137/156 (87%), Gaps = 4/156 (2%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TM+LSSS F GKAV PS + L R++MRKTA+K+ VSS SPWYG DRV YL
Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYL 59
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 60 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEA WFKAG+QIFS+GGLDYLGNPSL+HA
Sbjct: 120 ARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHA 155
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/154 (81%), Positives = 132/154 (85%), Gaps = 2/154 (1%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGP 59
MA +TMALSSS F GKAV S +E+ R+SMRKTA+ GSPWYG DRVKYLGP
Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
NGVKFGEAVWFK G+QIFSEGGL YLGNPSL+HA
Sbjct: 120 NGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHA 153
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 127/157 (80%), Positives = 135/157 (85%), Gaps = 7/157 (4%)
Query: 1 MATSTMALSSSFVGKAVNLAPS-GNELSNGGRISMRKTASK---SVSSGSPWYGLDRVKY 56
MA +TMALSS + +A APS + L RI+MRKTA+K + SSGSPWYG DRV Y
Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/158 (79%), Positives = 136/158 (86%), Gaps = 6/158 (3%)
Query: 1 MATSTMALSS-SFVGKAVNLA--PSGNELSNGGRISMRKTAS--KSVSSGSPWYGLDRVK 55
MA S+MALSS + GK V + PS EL G R +MRK+A+ K SSGSPWYG DRVK
Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQEL-GGARFTMRKSATTKKVASSGSPWYGPDRVK 59
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPE
Sbjct: 60 YLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPE 119
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 120 LLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 157
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/124 (94%), Positives = 120/124 (96%)
Query: 30 GRISMRKTASKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR+SMRKTASK+VSSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 70
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFSEGGLDYLGN S
Sbjct: 71 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQS 130
Query: 150 LIHA 153
LIHA
Sbjct: 131 LIHA 134
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/156 (79%), Positives = 132/156 (84%), Gaps = 8/156 (5%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA STMA+SS+ G + + G GRI+MRKT K +SGSPWYG DRVKYL
Sbjct: 1 MAASTMAISSTAMAGTPIKVGSFGE-----GRITMRKTVGKPKVAASGSPWYGPDRVKYL 55
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 56 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 115
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHA
Sbjct: 116 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 151
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/157 (82%), Positives = 137/157 (87%), Gaps = 7/157 (4%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKSVS---SGSPWYGLDRVKY 56
MA+STMALSS+ F GKAVN+ S R++MRKTA+K+ SGSPWYG DRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/157 (82%), Positives = 138/157 (87%), Gaps = 7/157 (4%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKSV---SSGSPWYGLDRVKY 56
MA+STMALSS+ F GKAVN+ S L R++MRKTA+K+ SSGSPWYG DRV Y
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 57
Query: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 116
LGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL
Sbjct: 58 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
Query: 117 LARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHA
Sbjct: 118 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/156 (79%), Positives = 133/156 (85%), Gaps = 9/156 (5%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMALSS + GKA ++ GRI+MRK+A+K +SGSPWYG DRV YL
Sbjct: 1 MAAATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYL 54
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 55 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 114
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHA
Sbjct: 115 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 150
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/145 (80%), Positives = 126/145 (86%), Gaps = 3/145 (2%)
Query: 11 SFVGKAVNLAPSGNELSNGGRISMRKTAS--KSVSSGSPWYGLDRVKYLGPFSGEPPSYL 68
+ GK + L PS EL R +MRK+A+ K SSGSPWYG DRVKYLGPFSGE PSYL
Sbjct: 15 TLAGKQLKLNPSSQEL-GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYL 73
Query: 69 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 128
TGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAV
Sbjct: 74 TGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAV 133
Query: 129 WFKAGAQIFSEGGLDYLGNPSLIHA 153
WFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 134 WFKAGSQIFSEGGLDYLGNPSLVHA 158
>sp|P09755|CB22_SOYBN Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max
GN=CAB2 PE=3 SV=1
Length = 256
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/154 (81%), Positives = 131/154 (85%), Gaps = 10/154 (6%)
Query: 1 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGLDRVKYLGP 59
MA STMALSSS G+A+ LAPS EL G R+SMRKTA K+VSSGSPWYG DRVKYLGP
Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGP 59
Query: 60 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 119
FSGE PSYLTGEF GLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60 FSGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 111
Query: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHA
Sbjct: 112 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 145
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/156 (75%), Positives = 128/156 (82%), Gaps = 11/156 (7%)
Query: 9 SSSFVGKAVN-LAPSGNELSNGG-------RISMRKTASKSVS---SGSPWYGLDRVKYL 57
S +F G ++ L P N+L G R++MRK +K ++ S SPWYG DRV YL
Sbjct: 8 SCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYL 67
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 68 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELL 127
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HA
Sbjct: 128 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 163
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/163 (73%), Positives = 131/163 (80%), Gaps = 10/163 (6%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TASKSVSSG--SPWYG 50
MA+ + +F G ++ + P N+L G R++MRK T KSV++ SPWYG
Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYG 64
Query: 51 LDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
DRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHA
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHA 167
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/163 (73%), Positives = 131/163 (80%), Gaps = 10/163 (6%)
Query: 1 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TASKSVSSG--SPWYG 50
MA+ + +F G ++ + P N+L G R++MRK T KSV++ SPWYG
Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYG 64
Query: 51 LDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110
DRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG
Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124
Query: 111 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHA
Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHA 167
>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene
pratensis PE=2 SV=2
Length = 205
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/158 (74%), Positives = 130/158 (82%), Gaps = 10/158 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGLDRVK 55
MATST+ S+F G+ + L P NEL NGGR+SMR+T + S WYG DR K
Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPK 55
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 56 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HA
Sbjct: 116 LLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHA 153
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/158 (74%), Positives = 128/158 (81%), Gaps = 9/158 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTASKSVSSGSPWYGLDRVK 55
MATST AL+S+F G+ L P NELS R+ M SK+ SGS WYG DR
Sbjct: 1 MATSTAALTSTFSGQ--QLKPV-NELSRKVGAGEARVQMMAPKSKA-PSGSIWYGSDRPL 56
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFSG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 57 YLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 116
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LLA+NGVKFGEAVWFKAG+QIF+EGGLDYLGNPSL+HA
Sbjct: 117 LLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHA 154
>sp|Q00827|CB48_MAIZE Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays
GN=CAB48 PE=3 SV=1
Length = 264
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/156 (73%), Positives = 126/156 (80%), Gaps = 6/156 (3%)
Query: 1 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGLDRVKYL 57
MA +TMA++S + VGK A ++ GRI+MRKTA+K SGSPWYG DRV YL
Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYL 57
Query: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
GP SG PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELL
Sbjct: 58 GPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELL 117
Query: 118 ARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ARNGVKFGE VWFKAG+QIFSEGGL + GNPSL+HA
Sbjct: 118 ARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHA 153
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 121
P YL G F D GL DPE FA+ + E+ + R AM G ++ G
Sbjct: 186 PLYLGGSF------DPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 236
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 128/158 (81%), Gaps = 11/158 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGLDRVK 55
MA S + ++SF+G A P +EL +GGRI+MR+T + S WYG DR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHA 152
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 128/158 (81%), Gaps = 11/158 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGLDRVK 55
MA S + ++SF+G A P +EL +GGRI+MR+T + S WYG DR K
Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPK 54
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE
Sbjct: 55 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPE 114
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 115 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHA 152
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 127/159 (79%), Gaps = 11/159 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTASKSVSSGSPWYGLDRV 54
MATS + S+F G+ S NEL NGGR +MR+T + S WYG DR
Sbjct: 1 MATSAIE-QSAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 154
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 127/159 (79%), Gaps = 11/159 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTASKSVSSGSPWYGLDRV 54
MATS + S+F G+ NEL GGR+SMR+T + +S WYG DR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVCKIGAVGGGRVSMRRTVKSAPTS--IWYGPDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 154
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum
lycopersicum GN=CAB4 PE=2 SV=1
Length = 265
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/159 (71%), Positives = 127/159 (79%), Gaps = 11/159 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTASKSVSSGSPWYGLDRV 54
MAT + S+FVG+AV S NE GRI+MR+T + S WYG DR
Sbjct: 1 MATCAIQ-QSAFVGQAV--GKSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
E+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 116 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHA 154
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus
thunbergii PE=2 SV=1
Length = 266
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/158 (71%), Positives = 125/158 (79%), Gaps = 8/158 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGLDRVK 55
MAT++ SSS G+ + L P NEL + RI+MR+T + S WYG DR K
Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPK 57
Query: 56 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 115
YLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPE
Sbjct: 58 YLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 116 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
LLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHA
Sbjct: 118 LLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHA 155
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/159 (69%), Positives = 126/159 (79%), Gaps = 8/159 (5%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTASKSVSSGSPWYGLDRV 54
MA +T S++ G++ L NELS R++MR+T SKS S + WYG DR
Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRP 58
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ P
Sbjct: 59 KFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTP 118
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
ELLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HA
Sbjct: 119 ELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 157
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/159 (70%), Positives = 125/159 (78%), Gaps = 11/159 (6%)
Query: 1 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTASKSVSSGSPWYGLDRV 54
MATS + S+F G+ S NEL GGR +MR+T + S WYG DR
Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRP 55
Query: 55 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 114
KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP
Sbjct: 56 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP 115
Query: 115 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
E+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 116 EILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 154
>sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum
GN=AB96 PE=1 SV=1
Length = 228
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/117 (88%), Positives = 108/117 (92%)
Query: 37 TASKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
T K SS SPW+G D VKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 60
Query: 97 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
EVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HA
Sbjct: 61 EVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 117
>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloroplastic (Fragment)
OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1
Length = 237
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 112/126 (88%), Gaps = 2/126 (1%)
Query: 28 NGGRISMRKTASKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 87
GGR++MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP
Sbjct: 3 EGGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 60
Query: 88 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGN 147
ETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGN
Sbjct: 61 ETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGN 120
Query: 148 PSLIHA 153
P+LIHA
Sbjct: 121 PNLIHA 126
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/124 (82%), Positives = 112/124 (90%), Gaps = 2/124 (1%)
Query: 30 GRISMRKTASKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET 89
GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 32 GRFSMRRTV-KAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89
Query: 90 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 149
FAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+
Sbjct: 90 FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPN 149
Query: 150 LIHA 153
L+HA
Sbjct: 150 LVHA 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,590,453
Number of Sequences: 539616
Number of extensions: 2562742
Number of successful extensions: 5170
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 4929
Number of HSP's gapped (non-prelim): 197
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)