Query 044975
Match_columns 334
No_of_seqs 222 out of 1187
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 14:58:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4.1E-83 1.4E-87 603.4 28.4 329 4-332 4-345 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.2E-77 1.4E-81 553.7 28.2 290 39-332 4-309 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 8.2E-77 2.8E-81 552.3 23.7 285 40-333 2-294 (319)
4 1odm_A Isopenicillin N synthas 100.0 1.4E-72 4.8E-77 527.1 24.8 279 39-332 6-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.6E-73 5.3E-78 529.0 15.4 278 40-333 3-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 2E-68 6.7E-73 487.6 26.1 261 40-332 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.9 0.031 1E-06 49.0 9.0 79 198-294 99-194 (243)
8 2rg4_A Uncharacterized protein 93.5 2 6.7E-05 36.6 13.8 43 243-297 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 91.9 0.54 1.9E-05 41.0 8.2 81 199-295 118-213 (247)
10 2jig_A Prolyl-4 hydroxylase; h 90.9 0.73 2.5E-05 39.4 7.9 48 245-296 170-218 (224)
11 3itq_A Prolyl 4-hydroxylase, a 89.6 0.99 3.4E-05 38.5 7.5 103 171-295 94-212 (216)
12 2iuw_A Alkylated repair protei 77.4 10 0.00035 32.6 8.6 84 199-294 127-229 (238)
13 3s57_A Alpha-ketoglutarate-dep 76.5 8.9 0.00031 32.1 7.8 81 200-292 102-200 (204)
14 3tht_A Alkylated DNA repair pr 71.9 6.8 0.00023 35.8 6.3 92 199-297 199-315 (345)
15 3i3q_A Alpha-ketoglutarate-dep 67.9 13 0.00045 31.3 6.8 78 200-293 107-201 (211)
16 2opi_A L-fuculose-1-phosphate 65.6 3.2 0.00011 35.1 2.5 36 41-76 125-160 (212)
17 2dbn_A Hypothetical protein YB 63.3 1.8 6.1E-05 41.0 0.5 54 39-93 98-151 (461)
18 1e4c_P L-fuculose 1-phosphate 60.2 4.4 0.00015 34.2 2.4 36 41-76 122-157 (215)
19 2fk5_A Fuculose-1-phosphate al 58.5 5.4 0.00019 33.3 2.7 51 41-91 117-176 (200)
20 1pvt_A Sugar-phosphate aldolas 55.7 6.6 0.00022 33.7 2.8 37 40-76 160-196 (238)
21 3o2g_A Gamma-butyrobetaine dio 53.8 7 0.00024 36.2 2.8 51 41-94 122-173 (388)
22 1otj_A Alpha-ketoglutarate-dep 53.2 11 0.00039 32.8 4.0 51 39-92 15-65 (283)
23 2v9l_A Rhamnulose-1-phosphate 51.1 7.1 0.00024 34.4 2.3 36 41-76 179-214 (274)
24 1oih_A Putative alkylsulfatase 46.9 17 0.00058 32.1 4.2 52 39-93 25-77 (301)
25 3pvj_A Alpha-ketoglutarate-dep 42.5 21 0.00073 31.2 4.1 52 39-93 13-64 (277)
26 3ocr_A Class II aldolase/adduc 41.9 13 0.00045 32.7 2.5 37 40-76 155-192 (273)
27 1m5a_B Insulin B chain; alpha 41.6 28 0.00096 19.5 2.9 20 52-71 8-27 (30)
28 2irp_A Putative aldolase class 41.4 12 0.00041 31.2 2.1 36 40-76 138-176 (208)
29 3rcq_A Aspartyl/asparaginyl be 38.9 46 0.0016 27.6 5.3 68 215-298 113-187 (197)
30 4ay7_A Methylcobalamin\: coenz 35.5 66 0.0023 28.9 6.3 42 52-93 303-348 (348)
31 3ghf_A Septum site-determining 32.6 29 0.001 26.3 2.9 36 44-79 51-86 (120)
32 3r1j_A Alpha-ketoglutarate-dep 32.0 42 0.0014 29.7 4.3 53 39-94 19-72 (301)
33 2x4k_A 4-oxalocrotonate tautom 29.6 49 0.0017 20.8 3.3 24 164-187 18-41 (63)
34 2da7_A Zinc finger homeobox pr 28.8 22 0.00076 24.4 1.4 40 152-191 14-53 (71)
35 3kt7_A PKHD-type hydroxylase T 28.0 60 0.0021 31.9 4.8 82 200-297 126-231 (633)
36 3m4r_A Uncharacterized protein 26.7 22 0.00074 30.1 1.3 34 42-76 156-190 (222)
37 3abf_A 4-oxalocrotonate tautom 25.0 74 0.0025 20.2 3.5 23 164-186 16-38 (64)
38 1nx8_A CARC, carbapenem syntha 25.0 19 0.00065 31.1 0.7 47 39-92 16-62 (273)
39 1otf_A 4-oxalocrotonate tautom 22.9 77 0.0026 19.9 3.3 23 164-186 15-37 (62)
40 2z7b_A MLR6791 protein; class 22.6 41 0.0014 29.3 2.3 36 41-76 157-201 (270)
41 2opa_A Probable tautomerase YW 22.6 80 0.0027 19.8 3.3 23 164-186 15-37 (61)
42 1vm6_A DHPR, dihydrodipicolina 22.2 64 0.0022 27.4 3.4 44 43-89 56-100 (228)
43 3qy9_A DHPR, dihydrodipicolina 20.0 1.1E+02 0.0038 26.1 4.5 39 54-92 89-127 (243)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.1e-83 Score=603.40 Aligned_cols=329 Identities=44% Similarity=0.788 Sum_probs=290.8
Q ss_pred chhhHHhhhcCCCCCCCcccCCCCCCCCCccc--CC---CCCCCceeeCCCCC------cHHHHHHHHHHHhhcceEEEE
Q 044975 4 EVRVQDVALKHNDTIPQQFIRSENEQPGITTV--HG---AVLEVPVIDLNDPD------QEKVHRSIVDASQQWGMFQVV 72 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~--~~---~~~~iPvIDls~~~------~~~~~~~l~~A~~~~GFf~l~ 72 (334)
..+||+|+++++.+||++|++|..++|..... .. ...+||||||+.+. +.+++++|.+||++||||||+
T Consensus 4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~ 83 (356)
T 1gp6_A 4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI 83 (356)
T ss_dssp CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence 37899999999999999999998887753220 00 12379999999974 245889999999999999999
Q ss_pred ecCCChHHHHHHHHHHhHhcCCCHHHHhhhcCCCCCCCccccCCCcccccccccCceeccccccCCCCccccCCCCCCCc
Q 044975 73 NHGIPGEVIRELQKVGKMFFELPQEEKEKYAKPPDSKDIQGYGSKLQKELEGKKGWVDHLFHKIWPPSAIDYRFWPENIP 152 (334)
Q Consensus 73 nhgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~ 152 (334)
||||+.++++++++.+++||+||.|+|+++........++||+........+..||+|.|++...|.....+|.||+.+|
T Consensus 84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~ 163 (356)
T 1gp6_A 84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS 163 (356)
T ss_dssp SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence 99999999999999999999999999999987542125789975544444567899999887655543346789999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhcCC-CceeeEEEecCCCCCCCCcccccccCCCCCcEEEEee
Q 044975 153 SYREANEEYRKYLHGVADKLLKCLSLGLGLEENDMKEALGGD-NLIYLLKINYYPPCPQPELALGVVAHTDMSSITLLVP 231 (334)
Q Consensus 153 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~q 231 (334)
+||+.+++|+++|.+|+.+||++|+++||+++++|.+.+... .+.+.||++|||||+.++..+|+++|||+|+||||+|
T Consensus 164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q 243 (356)
T 1gp6_A 164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243 (356)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence 999999999999999999999999999999999999988721 1568999999999998888899999999999999999
Q ss_pred CCCCCeeeeeCCceEEeccCCCeEEEEecchhHhhhcCcccccccccccCCCCceEEEEEeecCCCCC-eeecCCCCCCC
Q 044975 232 NDVQGLQASRDGHWYDVKYIPNALVIHIGDQMEILSNGKYKSVLHRTTVTKDKTRMSWPVFLEPPPDQ-EVGPHPKLVNE 310 (334)
Q Consensus 232 d~~~GLqV~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~p~~~~~~~ 310 (334)
|.++||||+++|+|++|+|.||++||||||+||+||||+|||++|||+.+++.+||||+||++|+.|+ +|.|+++++++
T Consensus 244 d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~ 323 (356)
T 1gp6_A 244 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV 323 (356)
T ss_dssp CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCC
Confidence 99999999999999999999999999999999999999999999999998888999999999999999 99999999999
Q ss_pred CCCCCCCCcCHHHHHHHHHhcC
Q 044975 311 ENPAKFKTKKYSDYAYCKLNKI 332 (334)
Q Consensus 311 ~~~~~y~~~~~~e~~~~~~~~~ 332 (334)
++|++|+++||+||++.++++.
T Consensus 324 ~~p~~y~~~t~~eyl~~~~~~~ 345 (356)
T 1gp6_A 324 ESPAKFPPRTFAQHIEHKLFGK 345 (356)
T ss_dssp SSCCSSCCEEHHHHHHHHHHHH
T ss_pred CCCccCCCccHHHHHHHHHHhc
Confidence 9999999999999999988764
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.2e-77 Score=553.73 Aligned_cols=290 Identities=24% Similarity=0.396 Sum_probs=254.9
Q ss_pred CCCCceeeCCCC--CcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcCCCHHHHhhhcCCCCCCCccccCC
Q 044975 39 VLEVPVIDLNDP--DQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFELPQEEKEKYAKPPDSKDIQGYGS 116 (334)
Q Consensus 39 ~~~iPvIDls~~--~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~ 116 (334)
+.+||||||+.+ ++++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ...+||..
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~ 81 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGARGYIP 81 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSG--GGTSEEEC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCC--CCcccccc
Confidence 568999999976 46788999999999999999999999999999999999999999999999998752 25789942
Q ss_pred Cccc--ccccccCceecccccc-CCCCc-----cccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhh
Q 044975 117 KLQK--ELEGKKGWVDHLFHKI-WPPSA-----IDYRFWPENIPSYREANEEYRKYLHGVADKLLKCLSLGLGLEENDMK 188 (334)
Q Consensus 117 ~~~~--~~~~~~~~~e~~~~~~-~~~~~-----~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 188 (334)
.... ......||+|.|.... .+... ..+|.||+.+|+||+.+++|+++|.+|+.+||++|+++||+++++|.
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 161 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK 161 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTH
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 2111 1124679999876532 12111 23689999999999999999999999999999999999999999999
Q ss_pred hhhcCCCceeeEEEecCCCCCCCCcccccccCCCCCcEEEEeeCCCCCeeeee-CCceEEeccCCCeEEEEecchhHhhh
Q 044975 189 EALGGDNLIYLLKINYYPPCPQPELALGVVAHTDMSSITLLVPNDVQGLQASR-DGHWYDVKYIPNALVIHIGDQMEILS 267 (334)
Q Consensus 189 ~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~-~g~W~~V~p~~g~~vVnvGd~l~~~T 267 (334)
+.+.. +.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++||||||+||+||
T Consensus 162 ~~~~~--~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 239 (312)
T 3oox_A 162 PTVQD--GNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLT 239 (312)
T ss_dssp HHHTT--CCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHT
T ss_pred HHhcC--CcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHh
Confidence 99987 5689999999999886555999999999999999999999999985 89999999999999999999999999
Q ss_pred cCcccccccccccCC----CCceEEEEEeecCCCCCeeecCCCCCCCCCCCCCC-CcCHHHHHHHHHhcC
Q 044975 268 NGKYKSVLHRTTVTK----DKTRMSWPVFLEPPPDQEVGPHPKLVNEENPAKFK-TKKYSDYAYCKLNKI 332 (334)
Q Consensus 268 nG~~~s~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~-~~~~~e~~~~~~~~~ 332 (334)
||+||||+|||+.++ ..+||||+||++|+.|++|+|+++++++++|++|+ ++|++||++.|++++
T Consensus 240 nG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 240 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp TTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred CCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999998753 46799999999999999999999999999999999 999999999999864
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8.2e-77 Score=552.29 Aligned_cols=285 Identities=34% Similarity=0.572 Sum_probs=252.9
Q ss_pred CCCceeeCCCCC---cHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcCCCHHHHhhhcCCCCCCCccccCC
Q 044975 40 LEVPVIDLNDPD---QEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFELPQEEKEKYAKPPDSKDIQGYGS 116 (334)
Q Consensus 40 ~~iPvIDls~~~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~ 116 (334)
.+||||||+.+. +++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCc
Confidence 479999999873 567899999999999999999999999999999999999999999999998642 347853
Q ss_pred CcccccccccCceeccccccCCCCccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhcCC-C
Q 044975 117 KLQKELEGKKGWVDHLFHKIWPPSAIDYRFWPENIPSYREANEEYRKYLHGVADKLLKCLSLGLGLEENDMKEALGGD-N 195 (334)
Q Consensus 117 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~ 195 (334)
.. ...+..||+|.|++...|. ..+|.||+.+|+||+.+++|+++|.+++.+||++|+++||+++++|.+.+... .
T Consensus 77 ~~--~e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 VQ--AEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp CC--CCGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred cc--ccCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 31 1235789999988765543 24689999999999999999999999999999999999999999999988742 2
Q ss_pred ceeeEEEecCCCCCCCCcccccccCCCCCcEEEEeeC-CCCCeeeeeCCceEEeccCCCeEEEEecchhHhhhcCccccc
Q 044975 196 LIYLLKINYYPPCPQPELALGVVAHTDMSSITLLVPN-DVQGLQASRDGHWYDVKYIPNALVIHIGDQMEILSNGKYKSV 274 (334)
Q Consensus 196 ~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~~s~ 274 (334)
+.+.||++|||||+.++...|+++|||+|+||||+|| .++||||+++|+|++|+|.||++||||||+||+||||+|||+
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~ 232 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSV 232 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecc
Confidence 5689999999999998888999999999999999995 799999999999999999999999999999999999999999
Q ss_pred ccccccCCCCceEEEEEeecCCCCCeeecCCCCCCCC---CCCCCCCcCHHHHHHHHHhcCC
Q 044975 275 LHRTTVTKDKTRMSWPVFLEPPPDQEVGPHPKLVNEE---NPAKFKTKKYSDYAYCKLNKIP 333 (334)
Q Consensus 275 ~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~---~~~~y~~~~~~e~~~~~~~~~~ 333 (334)
.|||+.+++++|||++||++|+.|++|.|++++++++ +|++|+++|++||++.++++.+
T Consensus 233 ~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~ 294 (319)
T 1w9y_A 233 MHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKF 294 (319)
T ss_dssp CEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTC
T ss_pred cceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhc
Confidence 9999998888999999999999999999999999987 5999999999999998877654
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=1.4e-72 Score=527.13 Aligned_cols=279 Identities=27% Similarity=0.375 Sum_probs=245.9
Q ss_pred CCCCceeeCCCCC------cHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHh-cCCCHHHHhhhcCCCCCCCc
Q 044975 39 VLEVPVIDLNDPD------QEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMF-FELPQEEKEKYAKPPDSKDI 111 (334)
Q Consensus 39 ~~~iPvIDls~~~------~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~ 111 (334)
..+||||||+.+. +.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------- 75 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------- 75 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------
Confidence 4689999999862 3468999999999999999999999 899999999999 9999999999975
Q ss_pred cccC---CCccccc-----ccccCceeccccccCCCC----------ccccCCCCCC--CchhHHHHHHHHHHHHHHHHH
Q 044975 112 QGYG---SKLQKEL-----EGKKGWVDHLFHKIWPPS----------AIDYRFWPEN--IPSYREANEEYRKYLHGVADK 171 (334)
Q Consensus 112 ~Gy~---~~~~~~~-----~~~~~~~e~~~~~~~~~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ 171 (334)
+||. ....... .+..||+|.|++...... ..++|.||+. +|+||+.+++|+++|.+|+.+
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 4553 2211110 146799999876542211 1247899997 999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhhcCCCceeeEE--EecCC------C---CCCCCc-ccccccCCCCCcEEEEeeCCCCCeee
Q 044975 172 LLKCLSLGLGLEENDMKEALGGDNLIYLLK--INYYP------P---CPQPEL-ALGVVAHTDMSSITLLVPNDVQGLQA 239 (334)
Q Consensus 172 ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~HtD~g~lTlL~qd~~~GLqV 239 (334)
|+++|+++||+++++|.+.+.. +.+.|| ++||| | |+.++. .+|+++|||+|+||||+||+++||||
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~~--~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV 233 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFKP--DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV 233 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCCT--TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEE
T ss_pred HHHHHHHHhCCCHHHHHHHhcC--cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEE
Confidence 9999999999999999999877 678999 99999 7 777665 78999999999999999999999999
Q ss_pred ee-CCceEEeccCCCeEEEEecchhHhhhcCcccccccccccCCCCceEEEEEeecCCCCCeeecCCCCCCCCCCCCCCC
Q 044975 240 SR-DGHWYDVKYIPNALVIHIGDQMEILSNGKYKSVLHRTTVTKDKTRMSWPVFLEPPPDQEVGPHPKLVNEENPAKFKT 318 (334)
Q Consensus 240 ~~-~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~ 318 (334)
+. +| |++|+|.||++||||||+||+||||+|||+.|||+. ++.+||||+||++|+.|++|.|+++++++++ ++|++
T Consensus 234 ~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~ 310 (331)
T 1odm_A 234 ETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREP 310 (331)
T ss_dssp EETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCC
T ss_pred EcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCC
Confidence 95 88 999999999999999999999999999999999986 4789999999999999999999999998877 89999
Q ss_pred cCHHHHHHHHHhcC
Q 044975 319 KKYSDYAYCKLNKI 332 (334)
Q Consensus 319 ~~~~e~~~~~~~~~ 332 (334)
+|++||++.+++++
T Consensus 311 ~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 311 LSYGDYLQNGLVSL 324 (331)
T ss_dssp CBHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 99999999998765
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.6e-73 Score=529.03 Aligned_cols=278 Identities=18% Similarity=0.285 Sum_probs=234.4
Q ss_pred CCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcCCC-HHHHhhhcCCCCCCCccccCCCc
Q 044975 40 LEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFELP-QEEKEKYAKPPDSKDIQGYGSKL 118 (334)
Q Consensus 40 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~~Gy~~~~ 118 (334)
.+||||||+.+...+..++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++..... ...+||+...
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~-~~~~Gy~~~~ 81 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVP-TMRRGFTGLE 81 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSC-CSSSEEEEC-
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCC-CCCCceeecc
Confidence 47999999876321223499999999999999999999999999999999999999 999999987642 2578996432
Q ss_pred cc------ccccccCceeccccccCCCCccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC----Chhhhh
Q 044975 119 QK------ELEGKKGWVDHLFHKIWPPSAIDYRFWPENIPSYREANEEYRKYLHGVADKLLKCLSLGLGL----EENDMK 188 (334)
Q Consensus 119 ~~------~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl----~~~~~~ 188 (334)
.+ ...+..||+|.|.+... +|.|| +|+||+.+++|+++|.+|+.+|+++|+++||+ ++++|.
T Consensus 82 ~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~ 153 (311)
T 1dcs_A 82 SESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL 153 (311)
T ss_dssp ----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH
T ss_pred ccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh
Confidence 21 22457899999876432 57999 89999999999999999999999999999999 888887
Q ss_pred hhhcCCCceeeEEEecCCCCCCCC--c--ccccccCCCCCcEEEEeeC-CCCC---eeeeeCCceEEeccCCCeEEEEec
Q 044975 189 EALGGDNLIYLLKINYYPPCPQPE--L--ALGVVAHTDMSSITLLVPN-DVQG---LQASRDGHWYDVKYIPNALVIHIG 260 (334)
Q Consensus 189 ~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~~~~~HtD~g~lTlL~qd-~~~G---LqV~~~g~W~~V~p~~g~~vVnvG 260 (334)
+. .+.||++|||||+.++ . .+|+++|||+|+||||+|| .++| |||+++|+|++|+|+||++|||||
T Consensus 154 ~~------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiG 227 (311)
T 1dcs_A 154 DC------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCG 227 (311)
T ss_dssp SC------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEEC
T ss_pred hc------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHH
Confidence 54 4789999999998763 3 6789999999999999999 8999 999999999999999999999999
Q ss_pred chhHhhhcCcccccccccccCC-----CCceEEEEEeecCCCCCeeecCCCCCCCCCCCCC--CCcCHHHHHHHHHhcCC
Q 044975 261 DQMEILSNGKYKSVLHRTTVTK-----DKTRMSWPVFLEPPPDQEVGPHPKLVNEENPAKF--KTKKYSDYAYCKLNKIP 333 (334)
Q Consensus 261 d~l~~~TnG~~~s~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y--~~~~~~e~~~~~~~~~~ 333 (334)
|+||+||||+|||++|||+.++ ..+||||+||++|+.|++|. +++++++++|++| +++|++||++.++++.+
T Consensus 228 D~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999999999999876 67999999999999999999 9999988899999 99999999998877643
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=2e-68 Score=487.65 Aligned_cols=261 Identities=25% Similarity=0.349 Sum_probs=223.2
Q ss_pred CCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcCCCHHHHhhhcCCCCCCCccccCCCc-
Q 044975 40 LEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFELPQEEKEKYAKPPDSKDIQGYGSKL- 118 (334)
Q Consensus 40 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~~~- 118 (334)
.+||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++...+. ..+||+...
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~--~~~GY~~~~~ 74 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRE--THDGFFPASI 74 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTT--TCCEEECCC-
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCC--CCCccccCcc
Confidence 47999999974 46899999999999999999999999999999999999998 78999977643 578995332
Q ss_pred cc--ccccccCceeccccccCCCCccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--hh---hhhhh
Q 044975 119 QK--ELEGKKGWVDHLFHKIWPPSAIDYRFWPENIPSYREANEEYRKYLHGVADKLLKCLSLGLGLEE--ND---MKEAL 191 (334)
Q Consensus 119 ~~--~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~~~ 191 (334)
.. ......||+|.|... .||..+|+||+.+++|+++|.+|+.+||++|+++||++. ++ |.+.+
T Consensus 75 ~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 144 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMI 144 (280)
T ss_dssp -------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHH
T ss_pred ccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHh
Confidence 11 112357999986542 377778999999999999999999999999999999863 32 55555
Q ss_pred cCCCceeeEEEecCCCCCCCC--cccccccCCCCCcEEEEeeCCCCCeeeee-CCceEEeccCCCeEEEEecchhHhhhc
Q 044975 192 GGDNLIYLLKINYYPPCPQPE--LALGVVAHTDMSSITLLVPNDVQGLQASR-DGHWYDVKYIPNALVIHIGDQMEILSN 268 (334)
Q Consensus 192 ~~~~~~~~lr~~~Yp~~~~~~--~~~~~~~HtD~g~lTlL~qd~~~GLqV~~-~g~W~~V~p~~g~~vVnvGd~l~~~Tn 268 (334)
... ..+.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++|||+||+||+|||
T Consensus 145 ~~~-~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 223 (280)
T 3on7_A 145 ANS-HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASD 223 (280)
T ss_dssp TTC-SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTT
T ss_pred cCC-ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhC
Confidence 542 24899999999998764 46899999999999999999999999995 899999999999999999999999999
Q ss_pred CcccccccccccCC----CCceEEEEEeecCCCCCeeecCCCCCCCCCCCCCCCcCHHHHHHHHHhcC
Q 044975 269 GKYKSVLHRTTVTK----DKTRMSWPVFLEPPPDQEVGPHPKLVNEENPAKFKTKKYSDYAYCKLNKI 332 (334)
Q Consensus 269 G~~~s~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~~~ 332 (334)
|+|||++|||+.++ ..+||||+||++|+.|++|.| ++|++||+++|++++
T Consensus 224 g~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 224 GYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999999999863 458999999999999999974 589999999999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.94 E-value=0.031 Score=48.97 Aligned_cols=79 Identities=19% Similarity=0.132 Sum_probs=53.8
Q ss_pred eeEEEecCCCCCCCCcccccccCCCCC-----------cEEEEee--C----CCCCeeeeeCCceEEeccCCCeEEEEec
Q 044975 198 YLLKINYYPPCPQPELALGVVAHTDMS-----------SITLLVP--N----DVQGLQASRDGHWYDVKYIPNALVIHIG 260 (334)
Q Consensus 198 ~~lr~~~Yp~~~~~~~~~~~~~HtD~g-----------~lTlL~q--d----~~~GLqV~~~g~W~~V~p~~g~~vVnvG 260 (334)
.-+++++|.+-. -..+|.|.. .+|+++. | ..|.|.+.....=..|+|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 458889998732 256677653 4555544 3 1244666654444789999999998642
Q ss_pred chhHhhhcCcccccccccccCCCCceEEEEEeec
Q 044975 261 DQMEILSNGKYKSVLHRTTVTKDKTRMSWPVFLE 294 (334)
Q Consensus 261 d~l~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 294 (334)
.++|+|..-..+.|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689997655568999999876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.51 E-value=2 Score=36.60 Aligned_cols=43 Identities=9% Similarity=0.026 Sum_probs=33.1
Q ss_pred CceEEeccCCCeEEEEecchhHhhhcCcccccccccccCC-CCceEEEEEeecCCC
Q 044975 243 GHWYDVKYIPNALVIHIGDQMEILSNGKYKSVLHRTTVTK-DKTRMSWPVFLEPPP 297 (334)
Q Consensus 243 g~W~~V~p~~g~~vVnvGd~l~~~TnG~~~s~~HRVv~~~-~~~R~Si~~F~~P~~ 297 (334)
..+..|.|.+|.+||.-+. -.|.|.... +++|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4567899999999987653 379998754 468999999998765
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.90 E-value=0.54 Score=41.03 Aligned_cols=81 Identities=21% Similarity=0.230 Sum_probs=55.1
Q ss_pred eEEEecCCCCCCCCcccccccCCCCC-----cEEEEee-CC-------CCCeeeeeCC--ceEEeccCCCeEEEEecchh
Q 044975 199 LLKINYYPPCPQPELALGVVAHTDMS-----SITLLVP-ND-------VQGLQASRDG--HWYDVKYIPNALVIHIGDQM 263 (334)
Q Consensus 199 ~lr~~~Yp~~~~~~~~~~~~~HtD~g-----~lTlL~q-d~-------~~GLqV~~~g--~W~~V~p~~g~~vVnvGd~l 263 (334)
-+.+.+|++. .-....|.|.. .+|+++. +. .|-|.+..++ ....|.|..|.+|+.-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3567888751 12356777763 6777765 11 2346777643 6789999999999876431
Q ss_pred HhhhcCcccccccccccCCCCceEEEEEeecC
Q 044975 264 EILSNGKYKSVLHRTTVTKDKTRMSWPVFLEP 295 (334)
Q Consensus 264 ~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~P 295 (334)
-.+|.|.. ..+.|+||+..++-
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEcC
Confidence 16899975 45799999886653
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=90.89 E-value=0.73 Score=39.38 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=34.6
Q ss_pred eEEeccCCCeEEEEecchhHhhhcCcc-cccccccccCCCCceEEEEEeecCC
Q 044975 245 WYDVKYIPNALVIHIGDQMEILSNGKY-KSVLHRTTVTKDKTRMSWPVFLEPP 296 (334)
Q Consensus 245 W~~V~p~~g~~vVnvGd~l~~~TnG~~-~s~~HRVv~~~~~~R~Si~~F~~P~ 296 (334)
-+.|.|..|.+|+.-- ...+|.. ..++|+|..-..+.|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 4889999999987653 1233433 5789999765456899999888643
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=89.55 E-value=0.99 Score=38.52 Aligned_cols=103 Identities=17% Similarity=0.013 Sum_probs=60.5
Q ss_pred HHHHHHHHhcCCChhhhhhhhcCCCceeeEEEecCCCCCCCCcccccccCCCCC-----------cEEEEee--C-CCCC
Q 044975 171 KLLKCLSLGLGLEENDMKEALGGDNLIYLLKINYYPPCPQPELALGVVAHTDMS-----------SITLLVP--N-DVQG 236 (334)
Q Consensus 171 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g-----------~lTlL~q--d-~~~G 236 (334)
+|.+.|+..+|++.+ ..-.+++++|.+... ..+|.|+. .+|+++. | ..||
T Consensus 94 ~i~~Ri~~~~gl~~~----------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GG 157 (216)
T 3itq_A 94 KIEKRISSIMNVPAS----------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGG 157 (216)
T ss_dssp HHHHHHHHHHTSCGG----------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEEC
T ss_pred HHHHHHHHhcCceec----------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCc
Confidence 344444455677632 123577888876322 45677753 3777765 2 2233
Q ss_pred -eeeeeCCceEEeccCCCeEEEEecchhHhhhcCc-ccccccccccCCCCceEEEEEeecC
Q 044975 237 -LQASRDGHWYDVKYIPNALVIHIGDQMEILSNGK-YKSVLHRTTVTKDKTRMSWPVFLEP 295 (334)
Q Consensus 237 -LqV~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~-~~s~~HRVv~~~~~~R~Si~~F~~P 295 (334)
+..... =+.|.|..|.+|+.-.- ..+|. -..++|+|..-..+.|+++..+++-
T Consensus 158 eT~Fp~~--~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 158 ETFFPKL--NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp CEEETTT--TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred eeEecCC--CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 333222 37889999998876531 11222 2468999976555689999888753
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=77.39 E-value=10 Score=32.56 Aligned_cols=84 Identities=14% Similarity=0.046 Sum_probs=53.7
Q ss_pred eEEEecCCCCCCCCcccccccCCCCC--------cEEEEeeCCCCCeeeee-C----------CceEEeccCCCeEEEEe
Q 044975 199 LLKINYYPPCPQPELALGVVAHTDMS--------SITLLVPNDVQGLQASR-D----------GHWYDVKYIPNALVIHI 259 (334)
Q Consensus 199 ~lr~~~Yp~~~~~~~~~~~~~HtD~g--------~lTlL~qd~~~GLqV~~-~----------g~W~~V~p~~g~~vVnv 259 (334)
.+-+|+|.+-. -++++|.|-- +.||-+- ...=+.+.. . +..+.+.-.+|+++|.-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 34579998732 2688888842 3333332 112233333 1 46899999999999999
Q ss_pred cchhHhhhcCcccccccccccCCCCceEEEEEeec
Q 044975 260 GDQMEILSNGKYKSVLHRTTVTKDKTRMSWPVFLE 294 (334)
Q Consensus 260 Gd~l~~~TnG~~~s~~HRVv~~~~~~R~Si~~F~~ 294 (334)
|++=..|..|.-+.. .....|+|+.|=.-
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777766654321 13468999998653
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=76.54 E-value=8.9 Score=32.12 Aligned_cols=81 Identities=9% Similarity=-0.039 Sum_probs=50.0
Q ss_pred EEEecCCCCCCCCcccccccCCCCC--------cEEEEeeCCCCCeeeee----------CCceEEeccCCCeEEEEecc
Q 044975 200 LKINYYPPCPQPELALGVVAHTDMS--------SITLLVPNDVQGLQASR----------DGHWYDVKYIPNALVIHIGD 261 (334)
Q Consensus 200 lr~~~Yp~~~~~~~~~~~~~HtD~g--------~lTlL~qd~~~GLqV~~----------~g~W~~V~p~~g~~vVnvGd 261 (334)
.-+|+|.+-. -+++.|.|-. +.+|-+- ...-+.+.. .+..+.+.-.+|+++|.-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 3478998732 2688888862 2233332 123344443 12578899999999999998
Q ss_pred hhHhhhcCcccccccccccCCCCceEEEEEe
Q 044975 262 QMEILSNGKYKSVLHRTTVTKDKTRMSWPVF 292 (334)
Q Consensus 262 ~l~~~TnG~~~s~~HRVv~~~~~~R~Si~~F 292 (334)
+=..|..|.-+.. .....|+|+.|-
T Consensus 176 ~q~~w~H~Ip~~~------~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWYHSLPVRK------KVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEEEEECCCT------TCCSCEEEEEEE
T ss_pred hhheeEeeccccC------CCCCCEEEEEee
Confidence 8777765433211 123679999884
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=71.90 E-value=6.8 Score=35.80 Aligned_cols=92 Identities=20% Similarity=0.238 Sum_probs=60.6
Q ss_pred eEEEecCCCCCCCCcccccccCCCCC------cEEEEeeCCCCCeeeee-CCceEEeccCCCeEEEEecchhHhhhcCcc
Q 044975 199 LLKINYYPPCPQPELALGVVAHTDMS------SITLLVPNDVQGLQASR-DGHWYDVKYIPNALVIHIGDQMEILSNGKY 271 (334)
Q Consensus 199 ~lr~~~Yp~~~~~~~~~~~~~HtD~g------~lTlL~qd~~~GLqV~~-~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ 271 (334)
..-+|+|.+- -++++|.|.. +.||=+ ....-+.+.. +|.++.+.-.+|+++|.-|++=..|..|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4457889772 2688999884 233333 1223344444 577999999999999999999999977665
Q ss_pred ccccccccc------------------CCCCceEEEEEeecCCC
Q 044975 272 KSVLHRTTV------------------TKDKTRMSWPVFLEPPP 297 (334)
Q Consensus 272 ~s~~HRVv~------------------~~~~~R~Si~~F~~P~~ 297 (334)
+-...-+-. .....|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 433322210 11346999999876665
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=67.91 E-value=13 Score=31.31 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=49.4
Q ss_pred EEEecCCCCCCCCcccccccCCCC-----C--cEEEEeeCCCCCeeeee---CCceEEeccCCCeEEEEecchhHhhhcC
Q 044975 200 LKINYYPPCPQPELALGVVAHTDM-----S--SITLLVPNDVQGLQASR---DGHWYDVKYIPNALVIHIGDQMEILSNG 269 (334)
Q Consensus 200 lr~~~Yp~~~~~~~~~~~~~HtD~-----g--~lTlL~qd~~~GLqV~~---~g~W~~V~p~~g~~vVnvGd~l~~~TnG 269 (334)
.-+|+|.+- . +++.|.|- + +++|-+- ...-+.+.. ++....+.-.+|+++|.-|++- .|
T Consensus 107 ~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~--- 175 (211)
T 3i3q_A 107 CLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF--- 175 (211)
T ss_dssp EEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC---
T ss_pred EEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce---
Confidence 447899772 2 68999992 2 2333332 223344442 3678899999999999988762 22
Q ss_pred cccccccccccCC-------CCceEEEEEee
Q 044975 270 KYKSVLHRTTVTK-------DKTRMSWPVFL 293 (334)
Q Consensus 270 ~~~s~~HRVv~~~-------~~~R~Si~~F~ 293 (334)
.|.|.... +..|+|+.|-.
T Consensus 176 -----~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -----YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -----CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -----EeccCcccCCcCCCCCCCEEEEEeee
Confidence 46665432 24699999864
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=65.56 E-value=3.2 Score=35.08 Aligned_cols=36 Identities=28% Similarity=0.518 Sum_probs=32.2
Q ss_pred CCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCC
Q 044975 41 EVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGI 76 (334)
Q Consensus 41 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 76 (334)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999987777788999999999888899999996
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=63.29 E-value=1.8 Score=40.96 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=40.8
Q ss_pred CCCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcC
Q 044975 39 VLEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFE 93 (334)
Q Consensus 39 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~ 93 (334)
..-||.|||+++....+.++..+.+++.|++.|.|. ||.+...+..+.+.+|.+
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 457999999875433334566778999999988876 898888877777777753
No 18
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=60.23 E-value=4.4 Score=34.22 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=32.0
Q ss_pred CCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCC
Q 044975 41 EVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGI 76 (334)
Q Consensus 41 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 76 (334)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999988777788999999998888889999996
No 19
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=58.48 E-value=5.4 Score=33.32 Aligned_cols=51 Identities=24% Similarity=0.281 Sum_probs=39.0
Q ss_pred CCcee-eCCCCCcHHHHHHHHHHHhhcceEEEEecCCC--h------HHHHHHHHHHhHh
Q 044975 41 EVPVI-DLNDPDQEKVHRSIVDASQQWGMFQVVNHGIP--G------EVIRELQKVGKMF 91 (334)
Q Consensus 41 ~iPvI-Dls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~--~------~l~~~~~~~~~~f 91 (334)
.||++ ++.....+++++.+.+++++.-.+.|.|||+= - +.+++++..+..+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 79999 88877777889999999998888999999952 2 4455555555443
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=55.69 E-value=6.6 Score=33.71 Aligned_cols=37 Identities=16% Similarity=0.295 Sum_probs=32.3
Q ss_pred CCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCC
Q 044975 40 LEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGI 76 (334)
Q Consensus 40 ~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 76 (334)
..||++++......++++.+.+++++.-.+.|.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3799999987777788999999999888899999996
No 21
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=53.79 E-value=7 Score=36.23 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=39.5
Q ss_pred CCceeeCCCC-CcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcCC
Q 044975 41 EVPVIDLNDP-DQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFEL 94 (334)
Q Consensus 41 ~iPvIDls~~-~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~l 94 (334)
++|.||++.+ .+++...++.+|+.++|++.+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 6899999875 35677899999999999999999988754 344556666443
No 22
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=53.18 E-value=11 Score=32.84 Aligned_cols=51 Identities=12% Similarity=0.169 Sum_probs=38.4
Q ss_pred CCCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhc
Q 044975 39 VLEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFF 92 (334)
Q Consensus 39 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF 92 (334)
.++|+-||++..-.++..++|.+++.++|++.+.+-.++.+ +..+.++.|=
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 35788889988434566889999999999999999888764 3344556653
No 23
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=51.06 E-value=7.1 Score=34.35 Aligned_cols=36 Identities=14% Similarity=0.252 Sum_probs=32.2
Q ss_pred CCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCC
Q 044975 41 EVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGI 76 (334)
Q Consensus 41 ~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi 76 (334)
.||++++......++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999987777789999999999988999999996
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=46.93 E-value=17 Score=32.07 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=39.3
Q ss_pred CCCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecC-CChHHHHHHHHHHhHhcC
Q 044975 39 VLEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHG-IPGEVIRELQKVGKMFFE 93 (334)
Q Consensus 39 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhg-i~~~l~~~~~~~~~~fF~ 93 (334)
.++|+-||++..-.++..++|.+++.++|++.+.+-. ++. ++..+.++.|=.
T Consensus 25 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 25 GAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp CEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred ceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 3567778998743556788999999999999999987 875 455556666644
No 25
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=42.52 E-value=21 Score=31.16 Aligned_cols=52 Identities=13% Similarity=0.136 Sum_probs=39.9
Q ss_pred CCCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhcC
Q 044975 39 VLEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFFE 93 (334)
Q Consensus 39 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF~ 93 (334)
-++|.=||++..-.++..++|.+|+.++|.+.+.+..++.+ +..+.++.|=.
T Consensus 13 Gaei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 13 GAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp CEEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred eEEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 35778899987335677889999999999999999988764 44456777644
No 26
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=41.92 E-value=13 Score=32.66 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=31.8
Q ss_pred CCCceeeCCCCC-cHHHHHHHHHHHhhcceEEEEecCC
Q 044975 40 LEVPVIDLNDPD-QEKVHRSIVDASQQWGMFQVVNHGI 76 (334)
Q Consensus 40 ~~iPvIDls~~~-~~~~~~~l~~A~~~~GFf~l~nhgi 76 (334)
..||++|+.... ..++.+.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 369999998765 6788899999999999999999996
No 27
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=41.59 E-value=28 Score=19.53 Aligned_cols=20 Identities=10% Similarity=0.195 Sum_probs=17.0
Q ss_pred cHHHHHHHHHHHhhcceEEE
Q 044975 52 QEKVHRSIVDASQQWGMFQV 71 (334)
Q Consensus 52 ~~~~~~~l~~A~~~~GFf~l 71 (334)
...+++.|.-.|.+-||||-
T Consensus 8 Gs~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp THHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHHhccCccccC
Confidence 45788899999999999983
No 28
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=41.43 E-value=12 Score=31.23 Aligned_cols=36 Identities=11% Similarity=0.298 Sum_probs=29.2
Q ss_pred CCCceeeCCCCCcHHHHHHHHHHHhhcc---eEEEEecCC
Q 044975 40 LEVPVIDLNDPDQEKVHRSIVDASQQWG---MFQVVNHGI 76 (334)
Q Consensus 40 ~~iPvIDls~~~~~~~~~~l~~A~~~~G---Ff~l~nhgi 76 (334)
..||++++. ...+++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 479999885 456688889999998865 788899996
No 29
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=38.91 E-value=46 Score=27.61 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=45.1
Q ss_pred cccccCCCCC--cEEEEeeCCCCCeeeeeCCceEEeccCCCeEEEEecchhHhhhcCccc----ccccccccCCCCceEE
Q 044975 215 LGVVAHTDMS--SITLLVPNDVQGLQASRDGHWYDVKYIPNALVIHIGDQMEILSNGKYK----SVLHRTTVTKDKTRMS 288 (334)
Q Consensus 215 ~~~~~HtD~g--~lTlL~qd~~~GLqV~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~~----s~~HRVv~~~~~~R~S 288 (334)
..+.+|+|.. .+++.+ ||+| |+ + ...+.||+.-..|..|..- |-.|.|.+.+++.|+-
T Consensus 113 ~~I~pH~g~~n~~lR~HL-----~L~~---------p~-~-~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rvv 176 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHL-----GLVI---------PK-E-GCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLI 176 (197)
T ss_dssp EEEEEECCSCTTEEEEEE-----EEEC---------CS-S-SEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEE
T ss_pred CCcCCeeCCCCCeEEEEE-----EEEe---------CC-C-CcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEE
Confidence 4578888875 444444 3332 22 2 3445677777788888753 7789999988889987
Q ss_pred EEE-eecCCCC
Q 044975 289 WPV-FLEPPPD 298 (334)
Q Consensus 289 i~~-F~~P~~d 298 (334)
+.+ |.+|+.+
T Consensus 177 L~~D~~rPdl~ 187 (197)
T 3rcq_A 177 FIVDVWHPELT 187 (197)
T ss_dssp EEEEEECTTSC
T ss_pred EEEeeeCCCCC
Confidence 655 6677654
No 30
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=35.54 E-value=66 Score=28.85 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=34.2
Q ss_pred cHHHHHHHHHHHhhcceEEEEecCCC----hHHHHHHHHHHhHhcC
Q 044975 52 QEKVHRSIVDASQQWGMFQVVNHGIP----GEVIRELQKVGKMFFE 93 (334)
Q Consensus 52 ~~~~~~~l~~A~~~~GFf~l~nhgi~----~~l~~~~~~~~~~fF~ 93 (334)
.+++.+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 46677788888888888766789975 5789999999999985
No 31
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=32.64 E-value=29 Score=26.27 Aligned_cols=36 Identities=11% Similarity=0.095 Sum_probs=25.4
Q ss_pred eeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChH
Q 044975 44 VIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGE 79 (334)
Q Consensus 44 vIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~ 79 (334)
|||++.+....-...|.+.|+++|+..+--.|.+.+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 568877642233677899999999999866665543
No 32
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=32.05 E-value=42 Score=29.69 Aligned_cols=53 Identities=8% Similarity=-0.006 Sum_probs=39.4
Q ss_pred CCCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEec-CCChHHHHHHHHHHhHhcCC
Q 044975 39 VLEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNH-GIPGEVIRELQKVGKMFFEL 94 (334)
Q Consensus 39 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~l~~~~~~~~~~fF~l 94 (334)
-++|+=||++..-.++..++|.+|+.++|.+.+.+. .++.+ +..+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 357888899843256778899999999999999998 78764 344566666443
No 33
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=29.61 E-value=49 Score=20.85 Aligned_cols=24 Identities=8% Similarity=0.217 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhcCCChhhh
Q 044975 164 YLHGVADKLLKCLSLGLGLEENDM 187 (334)
Q Consensus 164 ~~~~l~~~ll~~l~~~Lgl~~~~~ 187 (334)
.-.+|+..|.+++++.||.|++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 456888999999999999998643
No 34
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.85 E-value=22 Score=24.36 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=33.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhh
Q 044975 152 PSYREANEEYRKYLHGVADKLLKCLSLGLGLEENDMKEAL 191 (334)
Q Consensus 152 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~ 191 (334)
.+-+..+++||..-.+-...-+..||..+||+.+...-.|
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4568889999998888888889999999999998766555
No 35
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=28.05 E-value=60 Score=31.87 Aligned_cols=82 Identities=20% Similarity=0.171 Sum_probs=48.9
Q ss_pred EEEecCCCCCCCCcccccccCCCC-C--cEEEEee----C------CCCCeeeee-C-------CceEEeccCCCeEEEE
Q 044975 200 LKINYYPPCPQPELALGVVAHTDM-S--SITLLVP----N------DVQGLQASR-D-------GHWYDVKYIPNALVIH 258 (334)
Q Consensus 200 lr~~~Yp~~~~~~~~~~~~~HtD~-g--~lTlL~q----d------~~~GLqV~~-~-------g~W~~V~p~~g~~vVn 258 (334)
+.+.+|++- -....|.|. + .+|+++. | ..|-|+++. + .....|.|.-|++|+.
T Consensus 126 ~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 445667652 346788884 2 3555542 1 134488876 2 2477899999999986
Q ss_pred ecchhHhhhc-Cccccccccccc-CCCCceEEEEEee-cCCC
Q 044975 259 IGDQMEILSN-GKYKSVLHRTTV-TKDKTRMSWPVFL-EPPP 297 (334)
Q Consensus 259 vGd~l~~~Tn-G~~~s~~HRVv~-~~~~~R~Si~~F~-~P~~ 297 (334)
.- . + .++|.|.. ..++.|+||+-.+ .|..
T Consensus 200 ~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 200 KV-------LPG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp EC-------CTT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred Ec-------CCC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 42 1 1 24676532 1277899997554 4444
No 36
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=26.73 E-value=22 Score=30.10 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=27.5
Q ss_pred CceeeCCCCCcHHHHHHHHHHHhhc-ceEEEEecCC
Q 044975 42 VPVIDLNDPDQEKVHRSIVDASQQW-GMFQVVNHGI 76 (334)
Q Consensus 42 iPvIDls~~~~~~~~~~l~~A~~~~-GFf~l~nhgi 76 (334)
||++++..... ++++++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 88999877665 7888999999864 6777899996
No 37
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=25.05 E-value=74 Score=20.23 Aligned_cols=23 Identities=17% Similarity=0.082 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHhcCCChhh
Q 044975 164 YLHGVADKLLKCLSLGLGLEEND 186 (334)
Q Consensus 164 ~~~~l~~~ll~~l~~~Lgl~~~~ 186 (334)
.-.+++..|.+++++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34678889999999999999764
No 38
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=24.99 E-value=19 Score=31.12 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=35.2
Q ss_pred CCCCceeeCCCCCcHHHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhc
Q 044975 39 VLEVPVIDLNDPDQEKVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFF 92 (334)
Q Consensus 39 ~~~iPvIDls~~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF 92 (334)
.++|+-||++.+ + .++|.+++.++|++.+.+-.++.+ +..+.++.|=
T Consensus 16 Ga~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 16 GAYIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp SEEECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred eEEEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 346777788876 3 889999999999999999888754 4445556553
No 39
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.93 E-value=77 Score=19.93 Aligned_cols=23 Identities=4% Similarity=0.011 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHhcCCChhh
Q 044975 164 YLHGVADKLLKCLSLGLGLEEND 186 (334)
Q Consensus 164 ~~~~l~~~ll~~l~~~Lgl~~~~ 186 (334)
.-.+++..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45688899999999999999753
No 40
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=22.64 E-value=41 Score=29.31 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=29.1
Q ss_pred CCceeeCCC---------CCcHHHHHHHHHHHhhcceEEEEecCC
Q 044975 41 EVPVIDLND---------PDQEKVHRSIVDASQQWGMFQVVNHGI 76 (334)
Q Consensus 41 ~iPvIDls~---------~~~~~~~~~l~~A~~~~GFf~l~nhgi 76 (334)
.||++++.. ...+++++.+.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 699999641 125688899999999888889999996
No 41
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.63 E-value=80 Score=19.81 Aligned_cols=23 Identities=13% Similarity=0.212 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHhcCCChhh
Q 044975 164 YLHGVADKLLKCLSLGLGLEEND 186 (334)
Q Consensus 164 ~~~~l~~~ll~~l~~~Lgl~~~~ 186 (334)
.-.+|+..|.+++++.||++++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 45688899999999999998753
No 42
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=22.20 E-value=64 Score=27.42 Aligned_cols=44 Identities=20% Similarity=0.305 Sum_probs=29.0
Q ss_pred ceeeCCCCCcHHHHHHHHHHHhhcceEEEEec-CCChHHHHHHHHHHh
Q 044975 43 PVIDLNDPDQEKVHRSIVDASQQWGMFQVVNH-GIPGEVIRELQKVGK 89 (334)
Q Consensus 43 PvIDls~~~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~l~~~~~~~~~ 89 (334)
-+|||+. ++.+....+.|.+.|.=.|++. |.+++..+.+.++++
T Consensus 56 VvIDFT~---P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~ 100 (228)
T 1vm6_A 56 VVIDFSS---PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSK 100 (228)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTT
T ss_pred EEEECCC---HHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHh
Confidence 5899985 4455566677777787777754 777766655555433
No 43
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=20.02 E-value=1.1e+02 Score=26.06 Aligned_cols=39 Identities=13% Similarity=0.138 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhhcceEEEEecCCChHHHHHHHHHHhHhc
Q 044975 54 KVHRSIVDASQQWGMFQVVNHGIPGEVIRELQKVGKMFF 92 (334)
Q Consensus 54 ~~~~~l~~A~~~~GFf~l~nhgi~~~l~~~~~~~~~~fF 92 (334)
+..++|.++|++.++++--|-.+.-.++.++.+.+..+|
T Consensus 89 e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 89 KLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 335556666666666666666555555555555444443
Done!